Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67235.t1 | XP_003615951.1 | 99.1 | 233 | 2 | 0 | 1 | 233 | 1 | 233 | 3.50E-101 | 377.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67235.t1 | O22922 | 76.9 | 234 | 51 | 2 | 1 | 233 | 1 | 232 | 2.0e-81 | 303.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67235.t1 | G7K5T4 | 99.1 | 233 | 2 | 0 | 1 | 233 | 1 | 233 | 2.5e-101 | 377.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051850 | MS.gene67235 | 0.805044 | 1.61E-49 | -1.69E-46 |
| MS.gene054937 | MS.gene67235 | 0.803826 | 2.90E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene67235 | 0.820419 | 6.93E-53 | -1.69E-46 |
| MS.gene059726 | MS.gene67235 | 0.805628 | 1.22E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67235.t1 | MTR_5g074430 | 98.283 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 2.71e-173 | 476 |
| MS.gene67235.t1 | MTR_5g074430 | 97.863 | 234 | 4 | 1 | 1 | 233 | 1 | 234 | 1.15e-171 | 471 |
| MS.gene67235.t1 | MTR_1g055405 | 94.382 | 178 | 8 | 2 | 57 | 233 | 103 | 279 | 5.37e-108 | 312 |
| MS.gene67235.t1 | MTR_4g084990 | 61.864 | 236 | 80 | 3 | 7 | 233 | 11 | 245 | 1.30e-100 | 292 |
| MS.gene67235.t1 | MTR_4g084990 | 60.256 | 234 | 86 | 2 | 7 | 233 | 11 | 244 | 1.04e-99 | 290 |
| MS.gene67235.t1 | MTR_7g108715 | 57.500 | 160 | 58 | 3 | 83 | 233 | 3 | 161 | 3.89e-56 | 176 |
| MS.gene67235.t1 | MTR_4g084990 | 56.204 | 137 | 60 | 0 | 7 | 143 | 11 | 147 | 8.24e-53 | 169 |
| MS.gene67235.t1 | MTR_3g072860 | 84.810 | 79 | 12 | 0 | 46 | 124 | 62 | 140 | 5.09e-30 | 109 |
| MS.gene67235.t1 | MTR_7g108725 | 64.615 | 65 | 23 | 0 | 7 | 71 | 11 | 75 | 2.18e-25 | 95.9 |
| MS.gene67235.t1 | MTR_4g085040 | 64.615 | 65 | 23 | 0 | 9 | 73 | 13 | 77 | 7.26e-23 | 91.3 |
| MS.gene67235.t1 | MTR_4g085000 | 63.333 | 60 | 22 | 0 | 5 | 64 | 9 | 68 | 1.80e-21 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67235.t1 | AT2G30260 | 69.915 | 236 | 64 | 3 | 1 | 233 | 1 | 232 | 6.58e-124 | 351 |
| MS.gene67235.t1 | AT1G06960 | 72.961 | 233 | 59 | 2 | 1 | 233 | 1 | 229 | 6.23e-122 | 346 |
| MS.gene67235.t1 | AT1G06960 | 70.707 | 198 | 54 | 2 | 36 | 233 | 7 | 200 | 1.45e-96 | 280 |
| MS.gene67235.t1 | AT2G47580 | 56.904 | 239 | 92 | 4 | 5 | 233 | 13 | 250 | 6.09e-87 | 258 |
| MS.gene67235.t1 | AT2G30260 | 68.919 | 148 | 41 | 1 | 1 | 148 | 1 | 143 | 5.74e-72 | 217 |
| MS.gene67235.t1 | AT1G06960 | 74.825 | 143 | 34 | 1 | 1 | 143 | 1 | 141 | 1.93e-70 | 213 |
| MS.gene67235.t1 | AT1G06960 | 82.524 | 103 | 18 | 0 | 1 | 103 | 1 | 103 | 8.16e-63 | 192 |
| MS.gene67235.t1 | AT1G06960 | 66.887 | 151 | 46 | 2 | 83 | 233 | 4 | 150 | 4.87e-62 | 191 |
| MS.gene67235.t1 | AT1G06960 | 75.510 | 98 | 24 | 0 | 36 | 133 | 7 | 104 | 4.87e-45 | 147 |
Find 53 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCAATATGGAAGGATTT+TGG | 0.143011 | 5.2:+17914935 | MS.gene67235:CDS |
| ATTGAGATTCTTAATGTAAA+TGG | 0.200962 | 5.2:-17912911 | None:intergenic |
| CATCTGTCGCACTGCATTAC+TGG | 0.268948 | 5.2:-17915027 | None:intergenic |
| TATTGCTTATTCTCTCAATA+TGG | 0.294966 | 5.2:+17914924 | MS.gene67235:CDS |
| AAACCAGAGAGGATGCTTTC+AGG | 0.319590 | 5.2:+17912868 | None:intergenic |
| TTAATGTAAATGGTTTGATT+TGG | 0.322185 | 5.2:-17912901 | None:intergenic |
| CTTAGCAAAGTTTATAATCA+TGG | 0.324640 | 5.2:-17918449 | None:intergenic |
| GCCTCTTGGGCACCGGACCC+TGG | 0.364979 | 5.2:-17918214 | None:intergenic |
| CTCTATGAACAAAATATTGT+TGG | 0.365120 | 5.2:-17918245 | None:intergenic |
| TGTTGGGAGCAGCTGCCTCT+TGG | 0.368601 | 5.2:-17918228 | None:intergenic |
| GTTGGGAGCAGCTGCCTCTT+GGG | 0.371933 | 5.2:-17918227 | None:intergenic |
| GCACCATGTGTTCCACCATT+AGG | 0.384777 | 5.2:-17917679 | None:intergenic |
| GCCTCATTCCGTCCAGGGTC+CGG | 0.398715 | 5.2:+17918202 | MS.gene67235:CDS |
| ATGTAAATGGTTTGATTTGG+AGG | 0.406769 | 5.2:-17912898 | None:intergenic |
| AAACAATCTTCTGTGCCTAA+TGG | 0.424244 | 5.2:+17917664 | MS.gene67235:CDS |
| AACCAGAGAGGATGCTTTCA+GGG | 0.433914 | 5.2:+17912869 | None:intergenic |
| AGCAGCTGCCTCTTGGGCAC+CGG | 0.444275 | 5.2:-17918221 | None:intergenic |
| ACAATCATCCATGGCAATGC+AGG | 0.453318 | 5.2:+17918393 | MS.gene67235:CDS |
| TCTATGAACAAAATATTGTT+GGG | 0.458630 | 5.2:-17918244 | None:intergenic |
| GACGCCTAAGCTTCGAGGAC+AGG | 0.460104 | 5.2:+17914974 | MS.gene67235:CDS |
| AGAGGGAAGCTTTGTTCCAA+GGG | 0.460175 | 5.2:+17915624 | MS.gene67235:CDS |
| CGCTTGATCGAAGCAAAGCC+AGG | 0.463784 | 5.2:+17918340 | MS.gene67235:CDS |
| TTAGCAAAGTTTATAATCAT+GGG | 0.465775 | 5.2:-17918448 | None:intergenic |
| CATGCCTGTCCTCGAAGCTT+AGG | 0.475388 | 5.2:-17914978 | None:intergenic |
| ACCGGACCCTGGACGGAATG+AGG | 0.501996 | 5.2:-17918203 | None:intergenic |
| AAGCGCACTTCCTTAAAACC+TGG | 0.502688 | 5.2:-17918322 | None:intergenic |
| CAGCAGGCCTCATTCCGTCC+AGG | 0.503368 | 5.2:+17918196 | MS.gene67235:intron |
| CTAAAGACGCCTAAGCTTCG+AGG | 0.510089 | 5.2:+17914969 | MS.gene67235:CDS |
| AAGAGGGAAGCTTTGTTCCA+AGG | 0.510421 | 5.2:+17915623 | MS.gene67235:CDS |
| ATCCTGCCGGTAGTTTCATA+AGG | 0.510992 | 5.2:-17918274 | None:intergenic |
| CTTGGGCACCGGACCCTGGA+CGG | 0.524347 | 5.2:-17918210 | None:intergenic |
| GCTTATTCTCTCAATATGGA+AGG | 0.527328 | 5.2:+17914928 | MS.gene67235:CDS |
| AAATCTACAAATGCGATACC+TGG | 0.531054 | 5.2:-17918358 | None:intergenic |
| TCCAGGGTCCGGTGCCCAAG+AGG | 0.546064 | 5.2:+17918213 | MS.gene67235:CDS |
| AGCAGGCCTCATTCCGTCCA+GGG | 0.559600 | 5.2:+17918197 | MS.gene67235:intron |
| CAATCTTCTGTGCCTAATGG+TGG | 0.560473 | 5.2:+17917667 | MS.gene67235:CDS |
| TGCCTTATGAAACTACCGGC+AGG | 0.562261 | 5.2:+17918272 | MS.gene67235:CDS |
| ATGGCAATGCAGGCTCTACA+AGG | 0.563519 | 5.2:+17918403 | MS.gene67235:CDS |
| TAAGCTTCGAGGACAGGCAT+GGG | 0.574433 | 5.2:+17914980 | MS.gene67235:CDS |
| CTAAGCTTCGAGGACAGGCA+TGG | 0.581122 | 5.2:+17914979 | MS.gene67235:CDS |
| GATTGTATTGCTAAAGAAGA+GGG | 0.592319 | 5.2:+17915607 | MS.gene67235:CDS |
| GAGCATTTCGAGCATCCTGC+CGG | 0.593424 | 5.2:-17918287 | None:intergenic |
| TTGTAGAGCCTGCATTGCCA+TGG | 0.596181 | 5.2:-17918401 | None:intergenic |
| AGCGCACTTCCTTAAAACCT+GGG | 0.597463 | 5.2:-17918321 | None:intergenic |
| GTGCCTAATGGTGGAACACA+TGG | 0.600600 | 5.2:+17917676 | MS.gene67235:CDS |
| ATGCTCTTCGAACAATACCC+AGG | 0.603681 | 5.2:+17918304 | MS.gene67235:CDS |
| AGATGAGGCACAATCATCCA+TGG | 0.621792 | 5.2:+17918384 | MS.gene67235:CDS |
| AATTTGCCTTATGAAACTAC+CGG | 0.623907 | 5.2:+17918268 | MS.gene67235:CDS |
| AATGAAAAGATCAAGAAAGA+CGG | 0.624809 | 5.2:+17912931 | MS.gene67235:CDS |
| GGAACACATGGTGCAAGTAA+TGG | 0.626001 | 5.2:+17917688 | MS.gene67235:CDS |
| AGATTGTATTGCTAAAGAAG+AGG | 0.631624 | 5.2:+17915606 | MS.gene67235:CDS |
| ACCAGAGAGGATGCTTTCAG+GGG | 0.636302 | 5.2:+17912870 | None:intergenic |
| ACACATGGTGCAAGTAATGG+TGG | 0.721642 | 5.2:+17917691 | MS.gene67235:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGTAAATATTTATACATA+AGG | - | chr5.2:17914149-17914168 | None:intergenic | 10.0% |
| !!! | AATTTTTTGTTGAATTATTA+GGG | + | chr5.2:17913123-17913142 | MS.gene67235:intron | 10.0% |
| !!! | TGTATATACTTTATATTTTA+AGG | + | chr5.2:17917121-17917140 | MS.gene67235:intron | 10.0% |
| !! | AAATAATAATTCAAAAAGTG+AGG | - | chr5.2:17915720-17915739 | None:intergenic | 15.0% |
| !! | AAATTAATGTTTAGTACAAA+AGG | - | chr5.2:17916388-17916407 | None:intergenic | 15.0% |
| !! | CAAAAATGATAGAAAATATT+AGG | + | chr5.2:17915867-17915886 | MS.gene67235:intron | 15.0% |
| !! | TAAAAAGTTAATGAAAATTG+TGG | + | chr5.2:17913748-17913767 | MS.gene67235:intron | 15.0% |
| !! | TAATAATCAACATAGATTAA+AGG | - | chr5.2:17917731-17917750 | None:intergenic | 15.0% |
| !!! | AAAATTTAGTTTAATTGAAC+TGG | + | chr5.2:17913225-17913244 | MS.gene67235:intron | 15.0% |
| !!! | AAATTTAGTTTAATTGAACT+GGG | + | chr5.2:17913226-17913245 | MS.gene67235:intron | 15.0% |
| !!! | CACTTTTTGAATTATTATTT+GGG | + | chr5.2:17915720-17915739 | MS.gene67235:intron | 15.0% |
| !!! | CTAATATTTTCTATCATTTT+TGG | - | chr5.2:17915869-17915888 | None:intergenic | 15.0% |
| !!! | GAATTTTTTGTTGAATTATT+AGG | + | chr5.2:17913122-17913141 | MS.gene67235:intron | 15.0% |
| !!! | TCACTTTTTGAATTATTATT+TGG | + | chr5.2:17915719-17915738 | MS.gene67235:intron | 15.0% |
| !!! | TTACTTTTTACTACTTTTTT+AGG | + | chr5.2:17913011-17913030 | MS.gene67235:intron | 15.0% |
| !! | ATAAATCATGTACACAAAAT+AGG | - | chr5.2:17917022-17917041 | None:intergenic | 20.0% |
| !! | ATACAAGTCCAATATATATA+TGG | - | chr5.2:17914727-17914746 | None:intergenic | 20.0% |
| !! | ATATAACAGATCCTATATAT+AGG | + | chr5.2:17913959-17913978 | MS.gene67235:intron | 20.0% |
| !! | ATATATATATTGGACTTGTA+TGG | + | chr5.2:17914726-17914745 | MS.gene67235:intron | 20.0% |
| !! | ATATATCATTGTCATATGTA+CGG | + | chr5.2:17914185-17914204 | MS.gene67235:intron | 20.0% |
| !! | ATTGAGATTCTTAATGTAAA+TGG | - | chr5.2:17912914-17912933 | None:intergenic | 20.0% |
| !! | ATTTAACAAAATTAGAGAAG+AGG | - | chr5.2:17916575-17916594 | None:intergenic | 20.0% |
| !! | CATATTATAACAACATAGAT+TGG | + | chr5.2:17917294-17917313 | MS.gene67235:intron | 20.0% |
| !! | TAATATAACCAACAATAGAT+TGG | - | chr5.2:17913574-17913593 | None:intergenic | 20.0% |
| !! | TACAAGTCCAATATATATAT+GGG | - | chr5.2:17914726-17914745 | None:intergenic | 20.0% |
| !! | TAGAAAAGTAAGAAAAACAT+GGG | - | chr5.2:17912983-17913002 | None:intergenic | 20.0% |
| !! | TATAACAGATCCTATATATA+GGG | + | chr5.2:17913960-17913979 | MS.gene67235:intron | 20.0% |
| !! | TCTATGAACAAAATATTGTT+GGG | - | chr5.2:17918247-17918266 | None:intergenic | 20.0% |
| !! | TGTATTACAAAATTCAATGT+TGG | + | chr5.2:17914100-17914119 | MS.gene67235:intron | 20.0% |
| !! | TGTTAAACGTTGTTAAATAA+CGG | + | chr5.2:17917807-17917826 | MS.gene67235:intron | 20.0% |
| !! | TTAATGTAAATGGTTTGATT+TGG | - | chr5.2:17912904-17912923 | None:intergenic | 20.0% |
| !! | TTAGCAAAGTTTATAATCAT+GGG | - | chr5.2:17918451-17918470 | None:intergenic | 20.0% |
| !!! | AATAAGAACCTTTAATTTGA+TGG | + | chr5.2:17913784-17913803 | MS.gene67235:intron | 20.0% |
| !!! | ATATTATGTTTAGCTTTCTT+TGG | + | chr5.2:17915371-17915390 | MS.gene67235:intron | 20.0% |
| !!! | ATCATTGTATAACTTTTTAC+CGG | - | chr5.2:17913997-17914016 | None:intergenic | 20.0% |
| !!! | ATTCATTTTATTTTGCAATG+TGG | + | chr5.2:17916906-17916925 | MS.gene67235:intron | 20.0% |
| !!! | CTTTATATTTTAAGGATCTT+AGG | + | chr5.2:17917129-17917148 | MS.gene67235:intron | 20.0% |
| !!! | TATGGTTAGAAATTTTAACT+GGG | + | chr5.2:17913096-17913115 | MS.gene67235:intron | 20.0% |
| !!! | TTATGGTTAGAAATTTTAAC+TGG | + | chr5.2:17913095-17913114 | MS.gene67235:intron | 20.0% |
| !!! | TTCTCTAATTTTGTTAAATG+TGG | + | chr5.2:17916576-17916595 | MS.gene67235:intron | 20.0% |
| ! | AAAAATAAGCCAATCCAAAT+GGG | + | chr5.2:17913454-17913473 | MS.gene67235:intron | 25.0% |
| ! | AAACTCCATCATTCAAATTA+GGG | + | chr5.2:17917411-17917430 | MS.gene67235:intron | 25.0% |
| ! | AATGAAAAGATCAAGAAAGA+CGG | + | chr5.2:17912931-17912950 | MS.gene67235:CDS | 25.0% |
| ! | ACAAGTCCAATATATATATG+GGG | - | chr5.2:17914725-17914744 | None:intergenic | 25.0% |
| ! | AGTATATCAGTGTAATACAT+GGG | + | chr5.2:17914039-17914058 | MS.gene67235:intron | 25.0% |
| ! | ATAATCCCTAATTTGAATGA+TGG | - | chr5.2:17917419-17917438 | None:intergenic | 25.0% |
| ! | ATATAACAGATCCTATATGT+AGG | + | chr5.2:17914015-17914034 | MS.gene67235:intron | 25.0% |
| ! | ATATGTTTCAATTTAACTCG+TGG | + | chr5.2:17918090-17918109 | MS.gene67235:intron | 25.0% |
| ! | ATTGAGAGTAATATAAGAAG+AGG | + | chr5.2:17916044-17916063 | MS.gene67235:intron | 25.0% |
| ! | CAATTCAACCATCAAATTAA+AGG | - | chr5.2:17913795-17913814 | None:intergenic | 25.0% |
| ! | CAATTCACAACACTAAAATT+GGG | + | chr5.2:17917992-17918011 | MS.gene67235:intron | 25.0% |
| ! | CAGTATAACTTTAATACCAT+AGG | - | chr5.2:17915077-17915096 | None:intergenic | 25.0% |
| ! | CTCTATGAACAAAATATTGT+TGG | - | chr5.2:17918248-17918267 | None:intergenic | 25.0% |
| ! | CTTAGCAAAGTTTATAATCA+TGG | - | chr5.2:17918452-17918471 | None:intergenic | 25.0% |
| ! | GAATTCTTGGTTAAACATTA+TGG | + | chr5.2:17915271-17915290 | MS.gene67235:intron | 25.0% |
| ! | GGTTGAATTGATGAAATTAA+GGG | + | chr5.2:17913805-17913824 | MS.gene67235:intron | 25.0% |
| ! | GTACACAAATTAACAGATAT+AGG | - | chr5.2:17915100-17915119 | None:intergenic | 25.0% |
| ! | GTAGAAAAGTAAGAAAAACA+TGG | - | chr5.2:17912984-17913003 | None:intergenic | 25.0% |
| ! | TAAACTCCATCATTCAAATT+AGG | + | chr5.2:17917410-17917429 | MS.gene67235:intron | 25.0% |
| ! | TAATTTCTCTTAATGTCCAT+TGG | + | chr5.2:17915202-17915221 | MS.gene67235:intron | 25.0% |
| ! | TACAAAATTCAATGTTGGAT+GGG | + | chr5.2:17914105-17914124 | MS.gene67235:intron | 25.0% |
| ! | TACGTAATATTGTGAAATAG+CGG | + | chr5.2:17917904-17917923 | MS.gene67235:intron | 25.0% |
| ! | TATAACAGATCCTATATGTA+GGG | + | chr5.2:17914016-17914035 | MS.gene67235:intron | 25.0% |
| ! | TATAGATACTCCCTATATAT+AGG | - | chr5.2:17913973-17913992 | None:intergenic | 25.0% |
| ! | TATATCATTGTCATATGTAC+GGG | + | chr5.2:17914186-17914205 | MS.gene67235:intron | 25.0% |
| ! | TATTAGAGAAACTATCAAGA+AGG | + | chr5.2:17914487-17914506 | MS.gene67235:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | + | chr5.2:17913323-17913342 | MS.gene67235:intron | 25.0% |
| ! | TATTGCTTATTCTCTCAATA+TGG | + | chr5.2:17914924-17914943 | MS.gene67235:CDS | 25.0% |
| ! | TGGTTGAATTGATGAAATTA+AGG | + | chr5.2:17913804-17913823 | MS.gene67235:intron | 25.0% |
| ! | TTACAAAATTCAATGTTGGA+TGG | + | chr5.2:17914104-17914123 | MS.gene67235:intron | 25.0% |
| ! | TTCTAATGAATGACTAGTAT+TGG | - | chr5.2:17915846-17915865 | None:intergenic | 25.0% |
| ! | TTGAGAGTAATATAAGAAGA+GGG | + | chr5.2:17916045-17916064 | MS.gene67235:intron | 25.0% |
| !! | ACCATAGGTTTTTCATAAAA+TGG | - | chr5.2:17915062-17915081 | None:intergenic | 25.0% |
| !! | ATCATTGCATAACTTTTTAC+CGG | - | chr5.2:17913941-17913960 | None:intergenic | 25.0% |
| !! | CCATAGGTTTTTCATAAAAT+GGG | - | chr5.2:17915061-17915080 | None:intergenic | 25.0% |
| !! | CGTTAGTTTCTTTATTGAAT+TGG | + | chr5.2:17917565-17917584 | MS.gene67235:intron | 25.0% |
| !! | GTTTCTCTAATAGTTTTTGT+AGG | - | chr5.2:17914479-17914498 | None:intergenic | 25.0% |
| !! | TTATAATCATGGGATTTTGA+GGG | - | chr5.2:17918441-17918460 | None:intergenic | 25.0% |
| !! | TTCTTATGCTGAATGTTTTT+AGG | + | chr5.2:17913190-17913209 | MS.gene67235:intron | 25.0% |
| !! | TTGAATTATTAGGGTAGTTT+TGG | + | chr5.2:17913132-17913151 | MS.gene67235:intron | 25.0% |
| !! | TTTATAATCATGGGATTTTG+AGG | - | chr5.2:17918442-17918461 | None:intergenic | 25.0% |
| !! | TTTCTACCATCTTTTCTAAT+AGG | - | chr5.2:17914356-17914375 | None:intergenic | 25.0% |
| !!! | ACTACTTTTTTAGGTTACAA+CGG | + | chr5.2:17913020-17913039 | MS.gene67235:intron | 25.0% |
| !!! | ATTTGTAGATTTTGAAGATG+AGG | + | chr5.2:17918369-17918388 | MS.gene67235:CDS | 25.0% |
| !!! | CTTGTTTTTGTATGAAGTTA+CGG | + | chr5.2:17915485-17915504 | MS.gene67235:intron | 25.0% |
| !!! | TCGTTGAATAACTTTTTTAC+TGG | + | chr5.2:17914072-17914091 | MS.gene67235:intron | 25.0% |
| !!! | TTGTTTTTGTATGAAGTTAC+GGG | + | chr5.2:17915486-17915505 | MS.gene67235:intron | 25.0% |
| !!! | TTTGAAATCTTTTGTCATGT+TGG | + | chr5.2:17915394-17915413 | MS.gene67235:intron | 25.0% |
| !!! | TTTTAGAAGCATATCATTGA+TGG | - | chr5.2:17915534-17915553 | None:intergenic | 25.0% |
| AAAAAGAAACAAGAGGAGAA+AGG | + | chr5.2:17915652-17915671 | MS.gene67235:CDS | 30.0% | |
| AAAACGTGATAAAACACAAC+AGG | - | chr5.2:17915135-17915154 | None:intergenic | 30.0% | |
| AAATGTACTCTTATATCAGC+AGG | + | chr5.2:17918180-17918199 | MS.gene67235:intron | 30.0% | |
| AACTTGCAAACAAAGACTAA+AGG | - | chr5.2:17915907-17915926 | None:intergenic | 30.0% | |
| AAGAATGAGAATGAAAGATG+TGG | + | chr5.2:17915433-17915452 | MS.gene67235:intron | 30.0% | |
| AATTTGCCTTATGAAACTAC+CGG | + | chr5.2:17918268-17918287 | MS.gene67235:CDS | 30.0% | |
| AGATTGTATTGCTAAAGAAG+AGG | + | chr5.2:17915606-17915625 | MS.gene67235:CDS | 30.0% | |
| AGTAATATAAGAAGAGGGAA+AGG | + | chr5.2:17916050-17916069 | MS.gene67235:intron | 30.0% | |
| ATATTGTGAAATAGCGGTTA+TGG | + | chr5.2:17917910-17917929 | MS.gene67235:intron | 30.0% | |
| ATTGTGTCTCATATATTGCT+TGG | + | chr5.2:17916315-17916334 | MS.gene67235:intron | 30.0% | |
| CAAAAATAAGCCAATCCAAA+TGG | + | chr5.2:17913453-17913472 | MS.gene67235:intron | 30.0% | |
| CATTGCAATCTCATTATCTT+CGG | - | chr5.2:17916814-17916833 | None:intergenic | 30.0% | |
| CGAAAATAAGTCAATCCAAA+CGG | - | chr5.2:17913275-17913294 | None:intergenic | 30.0% | |
| GAAAAACATGGGAATGTAAA+TGG | - | chr5.2:17912972-17912991 | None:intergenic | 30.0% | |
| GAAATGACAACATTAGAGAA+AGG | + | chr5.2:17914320-17914339 | MS.gene67235:intron | 30.0% | |
| GAGTATATCAGTGTAATACA+TGG | + | chr5.2:17914038-17914057 | MS.gene67235:intron | 30.0% | |
| GATTGCAATGTTCTGTTATA+CGG | + | chr5.2:17916824-17916843 | MS.gene67235:intron | 30.0% | |
| GATTGTATTGCTAAAGAAGA+GGG | + | chr5.2:17915607-17915626 | MS.gene67235:CDS | 30.0% | |
| GCAATTCACAACACTAAAAT+TGG | + | chr5.2:17917991-17918010 | MS.gene67235:intron | 30.0% | |
| GCGTATTATGTATGAGAAAA+GGG | + | chr5.2:17913476-17913495 | MS.gene67235:intron | 30.0% | |
| TAACCAAGAATTCTTACAAG+CGG | - | chr5.2:17915264-17915283 | None:intergenic | 30.0% | |
| TCAAAAAGTGAGGATGATTA+TGG | - | chr5.2:17915710-17915729 | None:intergenic | 30.0% | |
| TCTCTACTCAACAAATTATG+AGG | - | chr5.2:17916530-17916549 | None:intergenic | 30.0% | |
| TTAATCTTGACGTATGATAG+AGG | + | chr5.2:17914692-17914711 | MS.gene67235:intron | 30.0% | |
| TTACGTACTAAATAGCGTAT+CGG | - | chr5.2:17917891-17917910 | None:intergenic | 30.0% | |
| TTCAGAGGGATAAATGATAA+TGG | - | chr5.2:17915765-17915784 | None:intergenic | 30.0% | |
| TTGAATTGCCAATCTATTGT+TGG | + | chr5.2:17913563-17913582 | MS.gene67235:intron | 30.0% | |
| TTTGCAAGTTAGGAGATAAA+GGG | + | chr5.2:17915917-17915936 | MS.gene67235:intron | 30.0% | |
| ! | AATAGCAGTTTGTTCAAACT+CGG | - | chr5.2:17917960-17917979 | None:intergenic | 30.0% |
| ! | CAAAATTAGAGAAGAGGTAT+AGG | - | chr5.2:17916569-17916588 | None:intergenic | 30.0% |
| ! | CATAACTTTTTACCGGATAT+AGG | - | chr5.2:17913934-17913953 | None:intergenic | 30.0% |
| ! | CCCATTTTATGAAAAACCTA+TGG | + | chr5.2:17915058-17915077 | MS.gene67235:CDS | 30.0% |
| ! | TATAATCATGGGATTTTGAG+GGG | - | chr5.2:17918440-17918459 | None:intergenic | 30.0% |
| ! | TTAGTCTTTGTTTGCAAGTT+AGG | + | chr5.2:17915907-17915926 | MS.gene67235:intron | 30.0% |
| ! | TTGCTCTTGATTTTCCATTT+CGG | + | chr5.2:17914752-17914771 | MS.gene67235:intron | 30.0% |
| ! | TTTTGAGCTAACCTATCATT+AGG | + | chr5.2:17916610-17916629 | MS.gene67235:intron | 30.0% |
| !! | ATATAGGGAGTATCTATATC+CGG | + | chr5.2:17913975-17913994 | MS.gene67235:intron | 30.0% |
| !! | ATGTAAATGGTTTGATTTGG+AGG | - | chr5.2:17912901-17912920 | None:intergenic | 30.0% |
| !! | TGGGGTTTATTTTTCTTCAT+AGG | - | chr5.2:17916162-17916181 | None:intergenic | 30.0% |
| !! | TGTTTTTGTATGAAGTTACG+GGG | + | chr5.2:17915487-17915506 | MS.gene67235:intron | 30.0% |
| !! | TTATTTTATGAAGTCTCGCA+TGG | + | chr5.2:17913722-17913741 | MS.gene67235:intron | 30.0% |
| !! | TTGGTTCTGATTGGTTTATT+TGG | + | chr5.2:17916735-17916754 | MS.gene67235:intron | 30.0% |
| !!! | GTAATTGGATTTTGTTTTGC+TGG | + | chr5.2:17914784-17914803 | MS.gene67235:intron | 30.0% |
| AAACAATCTTCTGTGCCTAA+TGG | + | chr5.2:17917664-17917683 | MS.gene67235:CDS | 35.0% | |
| AAACTAGACTTAGGTGGTTT+GGG | + | chr5.2:17914373-17914392 | MS.gene67235:intron | 35.0% | |
| AAATCCAGTGATGGTAGTTA+AGG | - | chr5.2:17916785-17916804 | None:intergenic | 35.0% | |
| AAATCTACAAATGCGATACC+TGG | - | chr5.2:17918361-17918380 | None:intergenic | 35.0% | |
| AACACTAAAATTGGGTCATC+GGG | + | chr5.2:17918000-17918019 | MS.gene67235:intron | 35.0% | |
| AAGGAAGAAGGAAAGAGAAA+TGG | - | chr5.2:17917450-17917469 | None:intergenic | 35.0% | |
| ACAAGATCAGAAAGTGATGA+TGG | - | chr5.2:17917531-17917550 | None:intergenic | 35.0% | |
| ACAGAATTCATGATGTCCAA+TGG | - | chr5.2:17915221-17915240 | None:intergenic | 35.0% | |
| ACAGCTTAACAGTTTATGTC+TGG | - | chr5.2:17917104-17917123 | None:intergenic | 35.0% | |
| ACATGAATTGAGAGAAGACT+TGG | - | chr5.2:17916110-17916129 | None:intergenic | 35.0% | |
| ACTACAAAATCCCCCATATT+TGG | - | chr5.2:17917379-17917398 | None:intergenic | 35.0% | |
| AGATGGTAGAAACTAGACTT+AGG | + | chr5.2:17914364-17914383 | MS.gene67235:intron | 35.0% | |
| AGTCAAATCACTAGAGGTAA+GGG | + | chr5.2:17914449-17914468 | MS.gene67235:intron | 35.0% | |
| AGTTAGGAGAGTAGATTAGT+GGG | + | chr5.2:17914425-17914444 | MS.gene67235:intron | 35.0% | |
| ATAAGAAGAGGGAAAGGATA+TGG | + | chr5.2:17916056-17916075 | MS.gene67235:intron | 35.0% | |
| ATTACGTTGCTTGAGAGTTA+TGG | + | chr5.2:17913078-17913097 | MS.gene67235:intron | 35.0% | |
| CAACACTAAAATTGGGTCAT+CGG | + | chr5.2:17917999-17918018 | MS.gene67235:intron | 35.0% | |
| CAAGATCAGAAAGTGATGAT+GGG | - | chr5.2:17917530-17917549 | None:intergenic | 35.0% | |
| CTAACTCCCAAAAAAACCTT+CGG | + | chr5.2:17916220-17916239 | MS.gene67235:intron | 35.0% | |
| CTACAAAATCCCCCATATTT+GGG | - | chr5.2:17917378-17917397 | None:intergenic | 35.0% | |
| CTGATATACTCCCTACATAT+AGG | - | chr5.2:17914029-17914048 | None:intergenic | 35.0% | |
| GAACTCAAGAAATGTATTGG+AGG | - | chr5.2:17917354-17917373 | None:intergenic | 35.0% | |
| GAGGATGATTATGGTTTGAA+AGG | - | chr5.2:17915701-17915720 | None:intergenic | 35.0% | |
| GCTTATTCTCTCAATATGGA+AGG | + | chr5.2:17914928-17914947 | MS.gene67235:CDS | 35.0% | |
| GGAGAAGAAAAAGAAACAAG+AGG | + | chr5.2:17915645-17915664 | MS.gene67235:CDS | 35.0% | |
| GGATCTAGATATCAATGAGT+TGG | + | chr5.2:17914508-17914527 | MS.gene67235:intron | 35.0% | |
| GGCGTATTATGTATGAGAAA+AGG | + | chr5.2:17913475-17913494 | MS.gene67235:intron | 35.0% | |
| GTAAACTCTATGCAATCTAG+AGG | - | chr5.2:17917784-17917803 | None:intergenic | 35.0% | |
| GTAGCACCTATTAGAAAAGA+TGG | + | chr5.2:17914347-17914366 | MS.gene67235:intron | 35.0% | |
| GTTCAACTGAACCATATTTC+TGG | + | chr5.2:17916711-17916730 | MS.gene67235:intron | 35.0% | |
| GTTTGCAAGTTAGGAGATAA+AGG | + | chr5.2:17915916-17915935 | MS.gene67235:intron | 35.0% | |
| GTTTGTTTGGGAGTTAAAGA+GGG | - | chr5.2:17917493-17917512 | None:intergenic | 35.0% | |
| TACAAAATCCCCCATATTTG+GGG | - | chr5.2:17917377-17917396 | None:intergenic | 35.0% | |
| TACGTACTAAATAGCGTATC+GGG | - | chr5.2:17917890-17917909 | None:intergenic | 35.0% | |
| TAGTTAGGAGAGTAGATTAG+TGG | + | chr5.2:17914424-17914443 | MS.gene67235:intron | 35.0% | |
| TCAGAACCAAACCAGAAATA+TGG | - | chr5.2:17916725-17916744 | None:intergenic | 35.0% | |
| TCATACATAATACGCCCATT+TGG | - | chr5.2:17913471-17913490 | None:intergenic | 35.0% | |
| TCTAAAAACACACCCAAACA+AGG | - | chr5.2:17915982-17916001 | None:intergenic | 35.0% | |
| TCTTACAAGCGGCTATATTT+GGG | - | chr5.2:17915253-17915272 | None:intergenic | 35.0% | |
| TGATACAGGTATCCTATATC+CGG | + | chr5.2:17913919-17913938 | MS.gene67235:intron | 35.0% | |
| TTCTTACAAGCGGCTATATT+TGG | - | chr5.2:17915254-17915273 | None:intergenic | 35.0% | |
| TTTGTTTGGGAGTTAAAGAG+GGG | - | chr5.2:17917492-17917511 | None:intergenic | 35.0% | |
| ! | AATGTATTGGAGGAAGCTTT+TGG | - | chr5.2:17917344-17917363 | None:intergenic | 35.0% |
| ! | ACTGAGCAGAATTAGTTCTT+TGG | - | chr5.2:17916663-17916682 | None:intergenic | 35.0% |
| ! | ATAGGTTAGCTCAAAAAGCT+TGG | - | chr5.2:17916606-17916625 | None:intergenic | 35.0% |
| ! | CTCTCAATATGGAAGGATTT+TGG | + | chr5.2:17914935-17914954 | MS.gene67235:CDS | 35.0% |
| ! | GAGAAGACTTGGAAATGTTT+TGG | - | chr5.2:17916099-17916118 | None:intergenic | 35.0% |
| ! | GCATACTTAAGGGTTTGTTT+GGG | - | chr5.2:17917505-17917524 | None:intergenic | 35.0% |
| ! | TATCATTTATCCCTCTGAAG+TGG | + | chr5.2:17915766-17915785 | MS.gene67235:intron | 35.0% |
| ! | TGCTCTTGATTTTCCATTTC+GGG | + | chr5.2:17914753-17914772 | MS.gene67235:intron | 35.0% |
| ! | TGTTTCTTTTTCTTCTCCCT+TGG | - | chr5.2:17915643-17915662 | None:intergenic | 35.0% |
| ! | TTGGAGAAAGACATGGTTTT+CGG | + | chr5.2:17914527-17914546 | MS.gene67235:intron | 35.0% |
| ! | TTTTTGCTGGAGAGAAAATC+AGG | - | chr5.2:17917756-17917775 | None:intergenic | 35.0% |
| !! | AACTGTGAGTTTTGTGATAC+AGG | + | chr5.2:17913905-17913924 | MS.gene67235:intron | 35.0% |
| !! | ACTGAACCATATTTCTGGTT+TGG | + | chr5.2:17916716-17916735 | MS.gene67235:intron | 35.0% |
| !! | ATTTCTGGTTTGGTTCTGAT+TGG | + | chr5.2:17916726-17916745 | MS.gene67235:intron | 35.0% |
| !! | CCTAGTTTTCCATATTGTGT+GGG | - | chr5.2:17916996-17917015 | None:intergenic | 35.0% |
| !! | TGTTCTATTTGTTGTCGTTG+TGG | + | chr5.2:17914881-17914900 | MS.gene67235:intron | 35.0% |
| !!! | AATGCATCCGAAGGTTTTTT+TGG | - | chr5.2:17916230-17916249 | None:intergenic | 35.0% |
| !!! | ATGCATCCGAAGGTTTTTTT+GGG | - | chr5.2:17916229-17916248 | None:intergenic | 35.0% |
| !!! | ATTTTGTTTTGCTGGTCTTG+GGG | + | chr5.2:17914792-17914811 | MS.gene67235:intron | 35.0% |
| !!! | GATTTTGTTTTGCTGGTCTT+GGG | + | chr5.2:17914791-17914810 | MS.gene67235:intron | 35.0% |
| !!! | GGTAGTTTTGGATTTGTGTT+AGG | + | chr5.2:17913144-17913163 | MS.gene67235:intron | 35.0% |
| !!! | TTGTTTGGGTGTGTTTTTAG+AGG | + | chr5.2:17915981-17916000 | MS.gene67235:intron | 35.0% |
| !!! | TTTTAGGTTACAACGGTTCT+TGG | + | chr5.2:17913027-17913046 | MS.gene67235:intron | 35.0% |
| AACAGACATTACCACTTCAG+AGG | - | chr5.2:17915780-17915799 | None:intergenic | 40.0% | |
| AAGAGGAGAAAGGTGAAGAA+TGG | + | chr5.2:17915662-17915681 | MS.gene67235:intron | 40.0% | |
| AATTAAGCGTAGCAGAGATG+AGG | + | chr5.2:17914246-17914265 | MS.gene67235:intron | 40.0% | |
| ACAAAATCCCCCATATTTGG+GGG | - | chr5.2:17917376-17917395 | None:intergenic | 40.0% | |
| ACAGACATTACCACTTCAGA+GGG | - | chr5.2:17915779-17915798 | None:intergenic | 40.0% | |
| ACCAGAACAGACCTAATGAT+AGG | - | chr5.2:17916624-17916643 | None:intergenic | 40.0% | |
| ACCTATCATTAGGTCTGTTC+TGG | + | chr5.2:17916620-17916639 | MS.gene67235:intron | 40.0% | |
| ACGTACTAAATAGCGTATCG+GGG | - | chr5.2:17917889-17917908 | None:intergenic | 40.0% | |
| AGGATGTTGCATACTTGCAT+TGG | + | chr5.2:17914266-17914285 | MS.gene67235:intron | 40.0% | |
| ATTACAATATCCCCCCGAAA+TGG | - | chr5.2:17914769-17914788 | None:intergenic | 40.0% | |
| CAATAGTAGTCAACATGTCG+CGG | + | chr5.2:17916871-17916890 | MS.gene67235:intron | 40.0% | |
| CACTGTAAGATAACTTGAGC+AGG | - | chr5.2:17915165-17915184 | None:intergenic | 40.0% | |
| CAGTGATGGTAGTTAAGGTT+GGG | - | chr5.2:17916780-17916799 | None:intergenic | 40.0% | |
| CATAATACGCCCATTTGGAT+TGG | - | chr5.2:17913466-17913485 | None:intergenic | 40.0% | |
| CCCACACAATATGGAAAACT+AGG | + | chr5.2:17916993-17917012 | MS.gene67235:intron | 40.0% | |
| CGTCTGATATGCAACTAACT+TGG | + | chr5.2:17916684-17916703 | MS.gene67235:intron | 40.0% | |
| CTACCATCACTGGATTTCAT+TGG | + | chr5.2:17916788-17916807 | MS.gene67235:intron | 40.0% | |
| CTCGGTCCCCATATATATAT+TGG | + | chr5.2:17914716-17914735 | MS.gene67235:intron | 40.0% | |
| GAAAAATAAACCCCAACGCA+AGG | + | chr5.2:17916167-17916186 | MS.gene67235:intron | 40.0% | |
| GAAACTAGACTTAGGTGGTT+TGG | + | chr5.2:17914372-17914391 | MS.gene67235:intron | 40.0% | |
| GAGTCAAATCACTAGAGGTA+AGG | + | chr5.2:17914448-17914467 | MS.gene67235:intron | 40.0% | |
| GGGGAACTCAAGAAATGTAT+TGG | - | chr5.2:17917357-17917376 | None:intergenic | 40.0% | |
| GTGAGTATGTGAGAAAGAGA+GGG | + | chr5.2:17916484-17916503 | MS.gene67235:intron | 40.0% | |
| GTGTCTCATATATTGCTTGG+TGG | + | chr5.2:17916318-17916337 | MS.gene67235:intron | 40.0% | |
| GTGTTGTGAATTGCAGATTG+TGG | - | chr5.2:17917985-17918004 | None:intergenic | 40.0% | |
| GTTAGGAGAGTAGATTAGTG+GGG | + | chr5.2:17914426-17914445 | MS.gene67235:intron | 40.0% | |
| TAGCCGCTTGTAAGAATTCT+TGG | + | chr5.2:17915258-17915277 | MS.gene67235:intron | 40.0% | |
| TAGGACTAAAACCCCCAATA+TGG | - | chr5.2:17916143-17916162 | None:intergenic | 40.0% | |
| TCGAAGAGTAACTTTGAGCA+GGG | - | chr5.2:17913858-17913877 | None:intergenic | 40.0% | |
| TCTGTACAGCTGAGAAAAAG+AGG | + | chr5.2:17917626-17917645 | MS.gene67235:intron | 40.0% | |
| TCTTGAGTTCCCCCAAATAT+GGG | + | chr5.2:17917364-17917383 | MS.gene67235:intron | 40.0% | |
| TGAACTGGGCATTTCTTAGT+TGG | + | chr5.2:17913240-17913259 | MS.gene67235:intron | 40.0% | |
| TGAGTATGTGAGAAAGAGAG+GGG | + | chr5.2:17916485-17916504 | MS.gene67235:intron | 40.0% | |
| TGCTTAGGGTAAAAGGAAGA+AGG | - | chr5.2:17917462-17917481 | None:intergenic | 40.0% | |
| TGGTAGAAACTAGACTTAGG+TGG | + | chr5.2:17914367-17914386 | MS.gene67235:intron | 40.0% | |
| TGTCATATGTACGGGACAAA+GGG | + | chr5.2:17914194-17914213 | MS.gene67235:intron | 40.0% | |
| TGTGAGTATGTGAGAAAGAG+AGG | + | chr5.2:17916483-17916502 | MS.gene67235:intron | 40.0% | |
| TTCTTGAGTTCCCCCAAATA+TGG | + | chr5.2:17917363-17917382 | MS.gene67235:intron | 40.0% | |
| TTGACGTATGATAGAGGACT+CGG | + | chr5.2:17914698-17914717 | MS.gene67235:intron | 40.0% | |
| TTGTCATATGTACGGGACAA+AGG | + | chr5.2:17914193-17914212 | MS.gene67235:intron | 40.0% | |
| TTGTGAAATAGCGGTTATGG+AGG | + | chr5.2:17917913-17917932 | MS.gene67235:intron | 40.0% | |
| TTTCGGGGGGATATTGTAAT+TGG | + | chr5.2:17914769-17914788 | MS.gene67235:intron | 40.0% | |
| ! | AGTTTTCCATATTGTGTGGG+AGG | - | chr5.2:17916993-17917012 | None:intergenic | 40.0% |
| ! | ATGATGGGAGGCATACTTAA+GGG | - | chr5.2:17917515-17917534 | None:intergenic | 40.0% |
| ! | ATGTTCGAGTTCCTCCATAT+TGG | + | chr5.2:17916126-17916145 | MS.gene67235:intron | 40.0% |
| ! | CAATGAGTTGGAGAAAGACA+TGG | + | chr5.2:17914520-17914539 | MS.gene67235:intron | 40.0% |
| ! | CGAACAATACCCAGGTTTTA+AGG | + | chr5.2:17918312-17918331 | MS.gene67235:CDS | 40.0% |
| ! | CTCTTGATTTTCCATTTCGG+GGG | + | chr5.2:17914755-17914774 | MS.gene67235:intron | 40.0% |
| ! | GCGACATGTTGACTACTATT+GGG | - | chr5.2:17916872-17916891 | None:intergenic | 40.0% |
| ! | GCTCTTGATTTTCCATTTCG+GGG | + | chr5.2:17914754-17914773 | MS.gene67235:intron | 40.0% |
| ! | GGCATACTTAAGGGTTTGTT+TGG | - | chr5.2:17917506-17917525 | None:intergenic | 40.0% |
| ! | GGTTTGTTTGGGAGTTAAAG+AGG | - | chr5.2:17917494-17917513 | None:intergenic | 40.0% |
| ! | GTTTTCCATATTGTGTGGGA+GGG | - | chr5.2:17916992-17917011 | None:intergenic | 40.0% |
| ! | TATTGGAGGAAGCTTTTGGA+GGG | - | chr5.2:17917340-17917359 | None:intergenic | 40.0% |
| ! | TCTAGAGGCAAAGTTTTTGC+TGG | - | chr5.2:17917769-17917788 | None:intergenic | 40.0% |
| ! | TCTTGATTTTCCATTTCGGG+GGG | + | chr5.2:17914756-17914775 | MS.gene67235:intron | 40.0% |
| ! | TGGGGGATTTTGTAGTATGA+AGG | + | chr5.2:17917383-17917402 | MS.gene67235:intron | 40.0% |
| ! | TGGTTTTCGGTAGAACACTA+TGG | + | chr5.2:17914540-17914559 | MS.gene67235:intron | 40.0% |
| ! | TGTTCGAGTTCCTCCATATT+GGG | + | chr5.2:17916127-17916146 | MS.gene67235:intron | 40.0% |
| !! | GCCTAGTTTTCCATATTGTG+TGG | - | chr5.2:17916997-17917016 | None:intergenic | 40.0% |
| !!! | ACATGGGGTGGATTTTTTCT+AGG | - | chr5.2:17916968-17916987 | None:intergenic | 40.0% |
| !!! | AGGTTTTTTTGGGAGTTAGG+TGG | - | chr5.2:17916219-17916238 | None:intergenic | 40.0% |
| !!! | CGAAGGTTTTTTTGGGAGTT+AGG | - | chr5.2:17916222-17916241 | None:intergenic | 40.0% |
| !!! | GGATTTTGTTTTGCTGGTCT+TGG | + | chr5.2:17914790-17914809 | MS.gene67235:intron | 40.0% |
| !!! | TTTTGTTTTGCTGGTCTTGG+GGG | + | chr5.2:17914793-17914812 | MS.gene67235:intron | 40.0% |
| AAAGGGAGGTGAGAGCTTTA+GGG | + | chr5.2:17915934-17915953 | MS.gene67235:intron | 45.0% | |
| AAATAAACCCCAACGCAAGG+TGG | + | chr5.2:17916170-17916189 | MS.gene67235:intron | 45.0% | |
| AAGCGCACTTCCTTAAAACC+TGG | - | chr5.2:17918325-17918344 | None:intergenic | 45.0% | |
| AATAAACCCCAACGCAAGGT+GGG | + | chr5.2:17916171-17916190 | MS.gene67235:intron | 45.0% | |
| ACAATCATCCATGGCAATGC+AGG | + | chr5.2:17918393-17918412 | MS.gene67235:CDS | 45.0% | |
| ACACATGGTGCAAGTAATGG+TGG | + | chr5.2:17917691-17917710 | MS.gene67235:CDS | 45.0% | |
| AGATGAGGCACAATCATCCA+TGG | + | chr5.2:17918384-17918403 | MS.gene67235:CDS | 45.0% | |
| AGCGCACTTCCTTAAAACCT+GGG | - | chr5.2:17918324-17918343 | None:intergenic | 45.0% | |
| AGTTGGACAATGTGTCCGTT+TGG | + | chr5.2:17913257-17913276 | MS.gene67235:intron | 45.0% | |
| ATATGTACGGGACAAAGGGT+TGG | + | chr5.2:17914198-17914217 | MS.gene67235:intron | 45.0% | |
| ATATTGTGTGGGAGGGAACA+TGG | - | chr5.2:17916985-17917004 | None:intergenic | 45.0% | |
| ATCCTGCCGGTAGTTTCATA+AGG | - | chr5.2:17918277-17918296 | None:intergenic | 45.0% | |
| ATGCTCTTCGAACAATACCC+AGG | + | chr5.2:17918304-17918323 | MS.gene67235:CDS | 45.0% | |
| ATGTTCCCTCCCACACAATA+TGG | + | chr5.2:17916984-17917003 | MS.gene67235:intron | 45.0% | |
| CAAACTCGGCTACACAACAA+TGG | - | chr5.2:17917946-17917965 | None:intergenic | 45.0% | |
| CAATCTTCTGTGCCTAATGG+TGG | + | chr5.2:17917667-17917686 | MS.gene67235:CDS | 45.0% | |
| CCAACCTTAACTACCATCAC+TGG | + | chr5.2:17916778-17916797 | MS.gene67235:intron | 45.0% | |
| CCAGTGATGGTAGTTAAGGT+TGG | - | chr5.2:17916781-17916800 | None:intergenic | 45.0% | |
| CTCGAAGAGTAACTTTGAGC+AGG | - | chr5.2:17913859-17913878 | None:intergenic | 45.0% | |
| CTCTAGTTGCGAGTTTGTAG+TGG | + | chr5.2:17917152-17917171 | MS.gene67235:intron | 45.0% | |
| CTTGAGTTCCCCCAAATATG+GGG | + | chr5.2:17917365-17917384 | MS.gene67235:intron | 45.0% | |
| GACAACATTAGAGAAAGGCG+AGG | + | chr5.2:17914325-17914344 | MS.gene67235:intron | 45.0% | |
| GACTAAAACCCCCAATATGG+AGG | - | chr5.2:17916140-17916159 | None:intergenic | 45.0% | |
| GATGTGTGGTAAGACTAGAC+TGG | + | chr5.2:17914288-17914307 | MS.gene67235:intron | 45.0% | |
| GCAAGTTAGGAGATAAAGGG+AGG | + | chr5.2:17915920-17915939 | MS.gene67235:intron | 45.0% | |
| GCATACTTGCATTGGATGTG+TGG | + | chr5.2:17914274-17914293 | MS.gene67235:intron | 45.0% | |
| GGAACACATGGTGCAAGTAA+TGG | + | chr5.2:17917688-17917707 | MS.gene67235:CDS | 45.0% | |
| TAAAGGGAGGTGAGAGCTTT+AGG | + | chr5.2:17915933-17915952 | MS.gene67235:intron | 45.0% | |
| TAACGGCTACAGTAGTGCTA+TGG | + | chr5.2:17917824-17917843 | MS.gene67235:intron | 45.0% | |
| TAGTTGCGAGTTTGTAGTGG+AGG | + | chr5.2:17917155-17917174 | MS.gene67235:intron | 45.0% | |
| TATGTGAGAAAGAGAGGGGA+GGG | + | chr5.2:17916489-17916508 | MS.gene67235:intron | 45.0% | |
| TATTGTGTGGGAGGGAACAT+GGG | - | chr5.2:17916984-17917003 | None:intergenic | 45.0% | |
| TTGAGTTCCCCCAAATATGG+GGG | + | chr5.2:17917366-17917385 | MS.gene67235:intron | 45.0% | |
| ! | AGTTGCGAGTTTGTAGTGGA+GGG | + | chr5.2:17917156-17917175 | MS.gene67235:intron | 45.0% |
| ! | CGCGACATGTTGACTACTAT+TGG | - | chr5.2:17916873-17916892 | None:intergenic | 45.0% |
| ! | GTATTGGAGGAAGCTTTTGG+AGG | - | chr5.2:17917341-17917360 | None:intergenic | 45.0% |
| ! | GTTCGAGTTCCTCCATATTG+GGG | + | chr5.2:17916128-17916147 | MS.gene67235:intron | 45.0% |
| ! | TGTGTCTGAAATGCATCCGA+AGG | - | chr5.2:17916239-17916258 | None:intergenic | 45.0% |
| ! | TTCGAGTTCCTCCATATTGG+GGG | + | chr5.2:17916129-17916148 | MS.gene67235:intron | 45.0% |
| !! | AAGAGGGAAGCTTTGTTCCA+AGG | + | chr5.2:17915623-17915642 | MS.gene67235:CDS | 45.0% |
| !! | AGAGGGAAGCTTTGTTCCAA+GGG | + | chr5.2:17915624-17915643 | MS.gene67235:CDS | 45.0% |
| !! | AGGAGAGTGCTTAGGGTAAA+AGG | - | chr5.2:17917469-17917488 | None:intergenic | 45.0% |
| !! | GATCAGAAAGTGATGATGGG+AGG | - | chr5.2:17917527-17917546 | None:intergenic | 45.0% |
| !! | GATGATGGGAGGCATACTTA+AGG | - | chr5.2:17917516-17917535 | None:intergenic | 45.0% |
| !!! | GGGGTGGATTTTTTCTAGGT+GGG | - | chr5.2:17916964-17916983 | None:intergenic | 45.0% |
| !!! | GGGTGGATTTTTTCTAGGTG+GGG | - | chr5.2:17916963-17916982 | None:intergenic | 45.0% |
| !!! | GGTGGATTTTTTCTAGGTGG+GGG | - | chr5.2:17916962-17916981 | None:intergenic | 45.0% |
| !!! | TGGGGTGGATTTTTTCTAGG+TGG | - | chr5.2:17916965-17916984 | None:intergenic | 45.0% |
| !!! | TTTTTTCTAGGTGGGGGATG+AGG | - | chr5.2:17916956-17916975 | None:intergenic | 45.0% |
| AAACACACCCAAACAAGGCG+AGG | - | chr5.2:17915977-17915996 | None:intergenic | 50.0% | |
| ATAAACCCCAACGCAAGGTG+GGG | + | chr5.2:17916172-17916191 | MS.gene67235:intron | 50.0% | |
| ATAGTTCCCCACCTTGCGTT+GGG | - | chr5.2:17916181-17916200 | None:intergenic | 50.0% | |
| ATGGCAATGCAGGCTCTACA+AGG | + | chr5.2:17918403-17918422 | MS.gene67235:CDS | 50.0% | |
| ATTGTGTGGGAGGGAACATG+GGG | - | chr5.2:17916983-17917002 | None:intergenic | 50.0% | |
| CATCTGTCGCACTGCATTAC+TGG | - | chr5.2:17915030-17915049 | None:intergenic | 50.0% | |
| CGGCCAATGAAATCCAGTGA+TGG | - | chr5.2:17916794-17916813 | None:intergenic | 50.0% | |
| CTAAAGACGCCTAAGCTTCG+AGG | + | chr5.2:17914969-17914988 | MS.gene67235:CDS | 50.0% | |
| GAGTTAGGTGGAGACAGGAA+AGG | - | chr5.2:17916207-17916226 | None:intergenic | 50.0% | |
| GCACCATGTGTTCCACCATT+AGG | - | chr5.2:17917682-17917701 | None:intergenic | 50.0% | |
| GCATGTAGAGAGAAGACCTG+GGG | + | chr5.2:17914395-17914414 | MS.gene67235:intron | 50.0% | |
| GCTATGGCGCTATTGCATAG+CGG | + | chr5.2:17917840-17917859 | MS.gene67235:intron | 50.0% | |
| GGCATGTAGAGAGAAGACCT+GGG | + | chr5.2:17914394-17914413 | MS.gene67235:intron | 50.0% | |
| GTATGTGAGAAAGAGAGGGG+AGG | + | chr5.2:17916488-17916507 | MS.gene67235:intron | 50.0% | |
| GTGGGGAGTCAAATCACTAG+AGG | + | chr5.2:17914443-17914462 | MS.gene67235:intron | 50.0% | |
| GTTTGGGAGTTAAAGAGGGG+AGG | - | chr5.2:17917489-17917508 | None:intergenic | 50.0% | |
| TAAGCTTCGAGGACAGGCAT+GGG | + | chr5.2:17914980-17914999 | MS.gene67235:CDS | 50.0% | |
| TGCCTTATGAAACTACCGGC+AGG | + | chr5.2:17918272-17918291 | MS.gene67235:CDS | 50.0% | |
| TTAGAGGTGAGCAGTCGAGA+AGG | + | chr5.2:17915997-17916016 | MS.gene67235:intron | 50.0% | |
| TTGTAGAGCCTGCATTGCCA+TGG | - | chr5.2:17918404-17918423 | None:intergenic | 50.0% | |
| TTTGGGAGTTAGGTGGAGAC+AGG | - | chr5.2:17916212-17916231 | None:intergenic | 50.0% | |
| ! | AAGCCTTATCCCACCAAGTG+GGG | - | chr5.2:17914589-17914608 | None:intergenic | 50.0% |
| ! | CAAGCCTTATCCCACCAAGT+GGG | - | chr5.2:17914590-17914609 | None:intergenic | 50.0% |
| ! | GTGCCTAATGGTGGAACACA+TGG | + | chr5.2:17917676-17917695 | MS.gene67235:CDS | 50.0% |
| !! | AGAGCTTTAGGGAGAGACGA+GGG | + | chr5.2:17915945-17915964 | MS.gene67235:intron | 50.0% |
| !! | GGGAATACCTCGCCTTGTTT+GGG | + | chr5.2:17915967-17915986 | MS.gene67235:intron | 50.0% |
| AAAGAGAGGGGAGGGAAGAG+GGG | + | chr5.2:17916497-17916516 | MS.gene67235:intron | 55.0% | |
| AGAAAGAGAGGGGAGGGAAG+AGG | + | chr5.2:17916495-17916514 | MS.gene67235:intron | 55.0% | |
| CATGCCTGTCCTCGAAGCTT+AGG | - | chr5.2:17914981-17915000 | None:intergenic | 55.0% | |
| CGCTTGATCGAAGCAAAGCC+AGG | + | chr5.2:17918340-17918359 | MS.gene67235:CDS | 55.0% | |
| CTAAGCTTCGAGGACAGGCA+TGG | + | chr5.2:17914979-17914998 | MS.gene67235:CDS | 55.0% | |
| CTCCTAACTACAGCATCCCC+AGG | - | chr5.2:17914414-17914433 | None:intergenic | 55.0% | |
| CTTATCCCACCAAGTGGGGT+CGG | - | chr5.2:17914585-17914604 | None:intergenic | 55.0% | |
| GAAAGAGAGGGGAGGGAAGA+GGG | + | chr5.2:17916496-17916515 | MS.gene67235:intron | 55.0% | |
| GACCTGGGGATGCTGTAGTT+AGG | + | chr5.2:17914409-17914428 | MS.gene67235:intron | 55.0% | |
| GAGCATTTCGAGCATCCTGC+CGG | - | chr5.2:17918290-17918309 | None:intergenic | 55.0% | |
| GATAGTTCCCCACCTTGCGT+TGG | - | chr5.2:17916182-17916201 | None:intergenic | 55.0% | |
| GGGCATGTAGAGAGAAGACC+TGG | + | chr5.2:17914393-17914412 | MS.gene67235:intron | 55.0% | |
| GGTTGGGCACAGTTCAGTTC+AGG | - | chr5.2:17916764-17916783 | None:intergenic | 55.0% | |
| GTACGGGACAAAGGGTTGGA+CGG | + | chr5.2:17914202-17914221 | MS.gene67235:intron | 55.0% | |
| GTGGGGGATGAGGAAACTGA+TGG | - | chr5.2:17916946-17916965 | None:intergenic | 55.0% | |
| TAGTTCCCCACCTTGCGTTG+GGG | - | chr5.2:17916180-17916199 | None:intergenic | 55.0% | |
| TCGAGAAGGAGGCTTACGAG+TGG | + | chr5.2:17916011-17916030 | MS.gene67235:intron | 55.0% | |
| TGTATGTAGCCGACCCCACT+TGG | + | chr5.2:17914573-17914592 | MS.gene67235:intron | 55.0% | |
| TTTGGGGGGAGGGAAGTAGA+GGG | + | chr5.2:17917180-17917199 | MS.gene67235:intron | 55.0% | |
| ! | CCAAGCCTTATCCCACCAAG+TGG | - | chr5.2:17914591-17914610 | None:intergenic | 55.0% |
| ! | CCACTTGGTGGGATAAGGCT+TGG | + | chr5.2:17914588-17914607 | MS.gene67235:intron | 55.0% |
| ! | GGGGAATACCTCGCCTTGTT+TGG | + | chr5.2:17915966-17915985 | MS.gene67235:intron | 55.0% |
| !! | AAGAGGGGAGGAGAGTGCTT+AGG | - | chr5.2:17917477-17917496 | None:intergenic | 55.0% |
| !! | AGAGGGGAGGAGAGTGCTTA+GGG | - | chr5.2:17917476-17917495 | None:intergenic | 55.0% |
| !! | AGCTTTAGGGAGAGACGAGG+GGG | + | chr5.2:17915947-17915966 | MS.gene67235:intron | 55.0% |
| !! | GAGAGCTTTAGGGAGAGACG+AGG | + | chr5.2:17915944-17915963 | MS.gene67235:intron | 55.0% |
| !! | GAGCTTTAGGGAGAGACGAG+GGG | + | chr5.2:17915946-17915965 | MS.gene67235:intron | 55.0% |
| AGCAGGCCTCATTCCGTCCA+GGG | + | chr5.2:17918197-17918216 | MS.gene67235:intron | 60.0% | |
| ATGTAGCCGACCCCACTTGG+TGG | + | chr5.2:17914576-17914595 | MS.gene67235:intron | 60.0% | |
| GACGCCTAAGCTTCGAGGAC+AGG | + | chr5.2:17914974-17914993 | MS.gene67235:CDS | 60.0% | |
| GAGGTGAGCAGTCGAGAAGG+AGG | + | chr5.2:17916000-17916019 | MS.gene67235:intron | 60.0% | |
| GTTGGGAGCAGCTGCCTCTT+GGG | - | chr5.2:17918230-17918249 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCACTTGGT+GGG | + | chr5.2:17914577-17914596 | MS.gene67235:intron | 60.0% | |
| TGTTGGGAGCAGCTGCCTCT+TGG | - | chr5.2:17918231-17918250 | None:intergenic | 60.0% | |
| ! | CGACCCCACTTGGTGGGATA+AGG | + | chr5.2:17914583-17914602 | MS.gene67235:intron | 60.0% |
| ACCGGACCCTGGACGGAATG+AGG | - | chr5.2:17918206-17918225 | None:intergenic | 65.0% | |
| AGCAGCTGCCTCTTGGGCAC+CGG | - | chr5.2:17918224-17918243 | None:intergenic | 65.0% | |
| CAGCAGGCCTCATTCCGTCC+AGG | + | chr5.2:17918196-17918215 | MS.gene67235:intron | 65.0% | |
| GCCTCATTCCGTCCAGGGTC+CGG | + | chr5.2:17918202-17918221 | MS.gene67235:CDS | 65.0% | |
| GTGTGGGAGGGAACATGGGG+TGG | - | chr5.2:17916980-17916999 | None:intergenic | 65.0% | |
| TCCAGGGTCCGGTGCCCAAG+AGG | + | chr5.2:17918213-17918232 | MS.gene67235:CDS | 70.0% | |
| !! | CTTGGGCACCGGACCCTGGA+CGG | - | chr5.2:17918213-17918232 | None:intergenic | 70.0% |
| !! | GCCTCTTGGGCACCGGACCC+TGG | - | chr5.2:17918217-17918236 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 17912880 | 17918477 | 17912880 | ID=MS.gene67235 |
| chr5.2 | mRNA | 17912880 | 17918477 | 17912880 | ID=MS.gene67235.t1;Parent=MS.gene67235 |
| chr5.2 | exon | 17912880 | 17912952 | 17912880 | ID=MS.gene67235.t1.exon1;Parent=MS.gene67235.t1 |
| chr5.2 | CDS | 17912880 | 17912952 | 17912880 | ID=cds.MS.gene67235.t1;Parent=MS.gene67235.t1 |
| chr5.2 | exon | 17914907 | 17915079 | 17914907 | ID=MS.gene67235.t1.exon2;Parent=MS.gene67235.t1 |
| chr5.2 | CDS | 17914907 | 17915079 | 17914907 | ID=cds.MS.gene67235.t1;Parent=MS.gene67235.t1 |
| chr5.2 | exon | 17915580 | 17915673 | 17915580 | ID=MS.gene67235.t1.exon3;Parent=MS.gene67235.t1 |
| chr5.2 | CDS | 17915580 | 17915673 | 17915580 | ID=cds.MS.gene67235.t1;Parent=MS.gene67235.t1 |
| chr5.2 | exon | 17917635 | 17917720 | 17917635 | ID=MS.gene67235.t1.exon4;Parent=MS.gene67235.t1 |
| chr5.2 | CDS | 17917635 | 17917720 | 17917635 | ID=cds.MS.gene67235.t1;Parent=MS.gene67235.t1 |
| chr5.2 | exon | 17918202 | 17918477 | 17918202 | ID=MS.gene67235.t1.exon5;Parent=MS.gene67235.t1 |
| chr5.2 | CDS | 17918202 | 17918477 | 17918202 | ID=cds.MS.gene67235.t1;Parent=MS.gene67235.t1 |
| Gene Sequence |
| Protein sequence |
