Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016068.t1 | XP_003588866.1 | 93.5 | 541 | 35 | 0 | 1 | 541 | 1 | 541 | 8.20E-287 | 995.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016068.t1 | Q9M084 | 68.0 | 500 | 150 | 2 | 52 | 541 | 59 | 558 | 2.5e-199 | 696.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016068.t1 | G7I885 | 93.5 | 541 | 35 | 0 | 1 | 541 | 1 | 541 | 5.9e-287 | 995.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016068.t1 | MTR_1g014140 | 98.152 | 541 | 10 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1098 |
| MS.gene016068.t1 | MTR_5g028360 | 70.826 | 545 | 138 | 4 | 1 | 541 | 62 | 589 | 0.0 | 768 |
| MS.gene016068.t1 | MTR_4g100920 | 25.304 | 494 | 287 | 16 | 87 | 536 | 86 | 541 | 2.41e-31 | 128 |
| MS.gene016068.t1 | MTR_8g102050 | 30.961 | 281 | 174 | 8 | 271 | 538 | 275 | 548 | 2.79e-28 | 119 |
| MS.gene016068.t1 | MTR_7g101050 | 31.560 | 282 | 173 | 10 | 271 | 538 | 298 | 573 | 4.18e-27 | 115 |
| MS.gene016068.t1 | MTR_2g036600 | 23.673 | 490 | 325 | 15 | 83 | 533 | 109 | 588 | 2.78e-22 | 101 |
| MS.gene016068.t1 | MTR_4g127770 | 22.200 | 491 | 322 | 15 | 87 | 533 | 601 | 1075 | 1.14e-19 | 93.6 |
| MS.gene016068.t1 | MTR_8g007295 | 22.490 | 498 | 296 | 18 | 90 | 533 | 111 | 572 | 2.75e-15 | 79.3 |
| MS.gene016068.t1 | MTR_4g127790 | 22.969 | 357 | 239 | 10 | 209 | 532 | 32 | 385 | 1.26e-14 | 76.3 |
| MS.gene016068.t1 | MTR_8g011530 | 23.019 | 265 | 191 | 7 | 278 | 534 | 367 | 626 | 1.69e-11 | 67.4 |
| MS.gene016068.t1 | MTR_4g052070 | 27.953 | 254 | 150 | 9 | 92 | 333 | 72 | 304 | 2.30e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016068.t1 | AT4G31180 | 64.632 | 557 | 179 | 4 | 3 | 541 | 2 | 558 | 0.0 | 731 |
| MS.gene016068.t1 | AT4G31180 | 64.632 | 557 | 179 | 4 | 3 | 541 | 2 | 558 | 0.0 | 731 |
| MS.gene016068.t1 | AT4G26870 | 65.631 | 515 | 171 | 4 | 28 | 541 | 23 | 532 | 0.0 | 691 |
| MS.gene016068.t1 | AT5G56680 | 30.882 | 272 | 168 | 8 | 278 | 536 | 303 | 567 | 1.85e-29 | 122 |
| MS.gene016068.t1 | AT4G17300 | 25.536 | 466 | 252 | 15 | 122 | 536 | 161 | 582 | 8.25e-28 | 117 |
| MS.gene016068.t1 | AT4G17300 | 25.536 | 466 | 252 | 15 | 122 | 536 | 141 | 562 | 1.06e-27 | 117 |
| MS.gene016068.t1 | AT1G70980 | 28.929 | 280 | 179 | 7 | 271 | 536 | 293 | 566 | 2.39e-25 | 110 |
Find 137 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTACATCGATTCTTTC+AGG | 0.151574 | 1.3:-8273046 | MS.gene016068:intron |
| ATTCCAGCCGCTCCTATTAA+AGG | 0.200895 | 1.3:-8276030 | MS.gene016068:CDS |
| CAAACAAATTAACACCTTTA+GGG | 0.270476 | 1.3:+8274791 | None:intergenic |
| CTTTGCGGCATCCTTCTTGC+AGG | 0.276045 | 1.3:+8276434 | None:intergenic |
| ATGTCAATATGTGGTGATTT+TGG | 0.279212 | 1.3:-8275125 | MS.gene016068:CDS |
| TTCTTAGTCATCAGAGAAAA+TGG | 0.279492 | 1.3:-8276168 | MS.gene016068:CDS |
| TCAAAAGAGTTACTGTAGTT+TGG | 0.284688 | 1.3:+8273356 | None:intergenic |
| GATCCCCTTGCTGTCAATTA+TGG | 0.290000 | 1.3:-8276342 | MS.gene016068:CDS |
| TATGTAAGCCGCAGAGTATT+TGG | 0.299031 | 1.3:+8274608 | None:intergenic |
| TGAAATTGAGAAGGCCATTC+AGG | 0.299926 | 1.3:-8275775 | MS.gene016068:intron |
| TGTTGTGAGGCACCTTTAAT+AGG | 0.308209 | 1.3:+8276018 | None:intergenic |
| TGGAAAATTCCTTGATTTGC+TGG | 0.311128 | 1.3:+8275466 | None:intergenic |
| AGGCATCTGTGCGAGTTTAC+AGG | 0.319353 | 1.3:-8275050 | MS.gene016068:CDS |
| CAAAAGAGTTACTGTAGTTT+GGG | 0.335107 | 1.3:+8273357 | None:intergenic |
| CACCGTACAGTGCTTGGTTC+AGG | 0.346864 | 1.3:-8276142 | MS.gene016068:CDS |
| CACAATACAGTTTCCTCACT+TGG | 0.354867 | 1.3:+8275856 | None:intergenic |
| CAGAAGATTCCTTTACTCAT+AGG | 0.359787 | 1.3:-8275070 | MS.gene016068:CDS |
| CACACTCCTAAGTTGATTGC+TGG | 0.375345 | 1.3:-8275236 | MS.gene016068:CDS |
| GTCCAGTCGTTGACATTGAC+AGG | 0.393463 | 1.3:+8276285 | None:intergenic |
| TAGCAAGGCATTGTATAAAA+TGG | 0.394303 | 1.3:+8273386 | None:intergenic |
| AGGTGGCGGCGGCAACTTCT+CGG | 0.397158 | 1.3:+8276394 | None:intergenic |
| GTACCACCACACGGTGGCTT+TGG | 0.402704 | 1.3:-8272873 | MS.gene016068:CDS |
| ACAACTTGTTCGTGTGAATC+AGG | 0.411639 | 1.3:-8275527 | MS.gene016068:CDS |
| CAAGAAGGATGCCGCAAAGC+TGG | 0.416596 | 1.3:-8276430 | MS.gene016068:CDS |
| CAAAGGGCAACCTGCATGCC+TGG | 0.419819 | 1.3:-8275174 | MS.gene016068:CDS |
| TACAGGTCTTGATGTTGAAA+TGG | 0.423398 | 1.3:-8275033 | MS.gene016068:CDS |
| AGGGTGGAGCTGCTGTCTTT+AGG | 0.428133 | 1.3:-8275205 | MS.gene016068:CDS |
| GGAGTAGAGATTGAACCTTT+TGG | 0.442706 | 1.3:-8273606 | MS.gene016068:CDS |
| CATTGACAGGGGTCTTCGAT+TGG | 0.443151 | 1.3:+8276298 | None:intergenic |
| AACACCTTTAGGGGTTCAAA+CGG | 0.444877 | 1.3:+8274801 | None:intergenic |
| ATCTGCGGACTCACTAAATC+AGG | 0.450583 | 1.3:+8276114 | None:intergenic |
| CTTGATTTGCTGGTGTTCGC+AGG | 0.452358 | 1.3:+8275476 | None:intergenic |
| AACGCCATCTTCTTCCCAAC+TGG | 0.452718 | 1.3:+8276189 | None:intergenic |
| GCCCTCCCACGGATTAGAAC+CGG | 0.456675 | 1.3:+8276225 | None:intergenic |
| GCAGCATCCTCGATATTAAT+CGG | 0.461821 | 1.3:+8275810 | None:intergenic |
| TGGAGCTGCTGTCTTTAGGC+TGG | 0.464922 | 1.3:-8275201 | MS.gene016068:CDS |
| GATTAAGAAACATTATTATG+AGG | 0.466183 | 1.3:-8275009 | MS.gene016068:intron |
| TTACATTTCCAACTTGAGAC+TGG | 0.472065 | 1.3:+8275440 | None:intergenic |
| TATTAAAGGTGCCTCACAAC+AGG | 0.473545 | 1.3:-8276016 | MS.gene016068:intron |
| CGGTGGCTTTGGAGTAGGCT+TGG | 0.490259 | 1.3:-8272862 | MS.gene016068:CDS |
| TTAGGCGAGGAGATAATATC+AGG | 0.491304 | 1.3:-8273143 | MS.gene016068:intron |
| TGAGGCTCTCAATGATTCAC+TGG | 0.499024 | 1.3:-8276256 | MS.gene016068:CDS |
| TGGTTTCACCGTACAGTGCT+TGG | 0.499781 | 1.3:-8276148 | MS.gene016068:CDS |
| AAAATGGTCTTACAGCCAAC+GGG | 0.502027 | 1.3:+8273402 | None:intergenic |
| GTCTTACAGCCAACGGGTAC+CGG | 0.506627 | 1.3:+8273408 | None:intergenic |
| TCAGTATTCAAGTCACCAAA+AGG | 0.506705 | 1.3:+8273591 | None:intergenic |
| CTAGATCCAGCAATCAACTT+AGG | 0.510006 | 1.3:+8275230 | None:intergenic |
| TTTAATAGGAGCGGCTGGAA+TGG | 0.513685 | 1.3:+8276032 | None:intergenic |
| GAGTCTATTGTCGATGTCGA+AGG | 0.513770 | 1.3:-8276063 | MS.gene016068:CDS |
| GCACCTTTAATAGGAGCGGC+TGG | 0.516328 | 1.3:+8276027 | None:intergenic |
| CACAAGCTATTCGACCAGTT+GGG | 0.517268 | 1.3:-8276203 | MS.gene016068:CDS |
| GCACAAGCTATTCGACCAGT+TGG | 0.517849 | 1.3:-8276204 | MS.gene016068:CDS |
| ACACCTTTAGGGGTTCAAAC+GGG | 0.524064 | 1.3:+8274802 | None:intergenic |
| CAGCCAACGGGTACCGGTGA+AGG | 0.524085 | 1.3:+8273414 | None:intergenic |
| CTGCGGCTTACATATGAAGA+AGG | 0.526092 | 1.3:-8274599 | MS.gene016068:CDS |
| TTCCAACTTGAGACTGGATG+TGG | 0.528293 | 1.3:+8275446 | None:intergenic |
| AATGAATATATATACCTGAA+TGG | 0.529761 | 1.3:+8275761 | None:intergenic |
| GAAACTGTATTGTGTGAGTA+AGG | 0.532678 | 1.3:-8275847 | MS.gene016068:CDS |
| AAACAAATTAACACCTTTAG+GGG | 0.533347 | 1.3:+8274792 | None:intergenic |
| GAATAGCTTGTGCCCTCCCA+CGG | 0.535699 | 1.3:+8276214 | None:intergenic |
| CTGCGAACACCAGCAAATCA+AGG | 0.537117 | 1.3:-8275475 | MS.gene016068:CDS |
| TTCCACATCCAGTCTCAAGT+TGG | 0.538148 | 1.3:-8275448 | MS.gene016068:CDS |
| GAAGTTGAGGTGACTGAGCC+AGG | 0.538658 | 1.3:+8275156 | None:intergenic |
| AGAAAGGAAACTAGGCCAGC+TGG | 0.539715 | 1.3:-8273565 | MS.gene016068:CDS |
| TCTTTAGGCTGGACTACAAA+GGG | 0.542694 | 1.3:-8275190 | MS.gene016068:CDS |
| CGATGTAGCAGAGGTGGCGG+CGG | 0.543849 | 1.3:+8276383 | None:intergenic |
| CCACACGGTGGCTTTGGAGT+AGG | 0.547341 | 1.3:-8272867 | MS.gene016068:CDS |
| AACAAGCCGGTTCTAATCCG+TGG | 0.547533 | 1.3:-8276231 | MS.gene016068:CDS |
| TTTGAACACAAAATGTAAGA+AGG | 0.547679 | 1.3:-8274850 | MS.gene016068:CDS |
| CCCCTGTCAATGTCAACGAC+TGG | 0.551263 | 1.3:-8276287 | MS.gene016068:CDS |
| TAAAATGGTCTTACAGCCAA+CGG | 0.552316 | 1.3:+8273401 | None:intergenic |
| TCGATATTAATCGGCAGAGT+AGG | 0.553228 | 1.3:+8275819 | None:intergenic |
| GGTGACTGAGCCAGGCATGC+AGG | 0.555621 | 1.3:+8275164 | None:intergenic |
| TCGATTGGAGCTCAATGAGC+GGG | 0.557785 | 1.3:+8276313 | None:intergenic |
| GACATTTGCTTGTGAAGTTG+AGG | 0.558674 | 1.3:+8275143 | None:intergenic |
| GCACAGATGCCTATGAGTAA+AGG | 0.560403 | 1.3:+8275061 | None:intergenic |
| CACAAGCAAATGTCAATATG+TGG | 0.561198 | 1.3:-8275134 | MS.gene016068:CDS |
| AGTCGATGTAGCAGAGGTGG+CGG | 0.572655 | 1.3:+8276380 | None:intergenic |
| CAGAGTTCTATATCCTTCAC+CGG | 0.573477 | 1.3:-8273427 | MS.gene016068:CDS |
| ATTAATCGGCAGAGTAGGAA+TGG | 0.575600 | 1.3:+8275824 | None:intergenic |
| TAGTTTGGGTTGTCATAGCA+AGG | 0.575643 | 1.3:+8273371 | None:intergenic |
| GAAGAACGTGCACAAGCTTG+CGG | 0.577219 | 1.3:-8273089 | MS.gene016068:CDS |
| TTTATCCACGTGACCCACTC+AGG | 0.577438 | 1.3:-8272788 | MS.gene016068:CDS |
| GTCTTTAGGCTGGACTACAA+AGG | 0.579932 | 1.3:-8275191 | MS.gene016068:CDS |
| TCGACCAGTTGGGAAGAAGA+TGG | 0.581394 | 1.3:-8276193 | MS.gene016068:CDS |
| AGACTCACGGCTGAGAGCGG+CGG | 0.581736 | 1.3:+8276080 | None:intergenic |
| TGCACAAGCTTGCGGCATTG+AGG | 0.583418 | 1.3:-8273081 | MS.gene016068:CDS |
| AATCATTGAGAGCCTCAACT+CGG | 0.583678 | 1.3:+8276262 | None:intergenic |
| ACTGAAGCAGAAAGGAAACT+AGG | 0.584857 | 1.3:-8273573 | MS.gene016068:CDS |
| GAGAGTCGATGTAGCAGAGG+TGG | 0.585897 | 1.3:+8276377 | None:intergenic |
| TACTCTGCCGATTAATATCG+AGG | 0.589627 | 1.3:-8275817 | MS.gene016068:CDS |
| TCCAGTCGTTGACATTGACA+GGG | 0.592334 | 1.3:+8276286 | None:intergenic |
| AGAGAGAGTCGATGTAGCAG+AGG | 0.593608 | 1.3:+8276374 | None:intergenic |
| ACTTGAATACTGAAGCAGAA+AGG | 0.595013 | 1.3:-8273581 | MS.gene016068:CDS |
| TGATTTAGTGAGTCCGCAGA+TGG | 0.596877 | 1.3:-8276112 | MS.gene016068:CDS |
| GTACCCGTTTGAACCCCTAA+AGG | 0.597654 | 1.3:-8274805 | MS.gene016068:intron |
| ATCATTGAGAGCCTCAACTC+GGG | 0.599803 | 1.3:+8276263 | None:intergenic |
| CAACGACTGGACCCGAGTTG+AGG | 0.600329 | 1.3:-8276274 | MS.gene016068:CDS |
| TCAAGAGCCGACACTGTCAT+CGG | 0.603493 | 1.3:-8276484 | MS.gene016068:CDS |
| GATCCTTCCGATGACAGTGT+CGG | 0.605021 | 1.3:+8276477 | None:intergenic |
| TGAGGCACCTTTAATAGGAG+CGG | 0.608618 | 1.3:+8276023 | None:intergenic |
| TATCCTTCACCGGTACCCGT+TGG | 0.609544 | 1.3:-8273417 | MS.gene016068:CDS |
| GCCGGTTCTAATCCGTGGGA+GGG | 0.610769 | 1.3:-8276226 | MS.gene016068:CDS |
| TTCGATTGGAGCTCAATGAG+CGG | 0.611035 | 1.3:+8276312 | None:intergenic |
| CAGCAATCAACTTAGGAGTG+TGG | 0.611888 | 1.3:+8275237 | None:intergenic |
| TGATTCACTGGAGAACAAGC+CGG | 0.613416 | 1.3:-8276244 | MS.gene016068:CDS |
| GCGGCAAATTTCACCATCTG+CGG | 0.614321 | 1.3:+8276099 | None:intergenic |
| ATTGCTGGATCTAGTGAGGG+TGG | 0.614640 | 1.3:-8275221 | MS.gene016068:CDS |
| ATACCATAATTGACAGCAAG+GGG | 0.614733 | 1.3:+8276339 | None:intergenic |
| ACAAGCCGGTTCTAATCCGT+GGG | 0.615482 | 1.3:-8276230 | MS.gene016068:CDS |
| TATTGTCGATGTCGAAGGTG+TGG | 0.616371 | 1.3:-8276058 | MS.gene016068:CDS |
| ATCATGGTGCAATCCTGAGT+GGG | 0.620490 | 1.3:+8272775 | None:intergenic |
| AATAGACTCACGGCTGAGAG+CGG | 0.623488 | 1.3:+8276077 | None:intergenic |
| AGCCGGTTCTAATCCGTGGG+AGG | 0.623958 | 1.3:-8276227 | MS.gene016068:CDS |
| AAGTGAAGTTGAAATTGAGA+AGG | 0.624126 | 1.3:-8275784 | MS.gene016068:CDS |
| GAGCCGACACTGTCATCGGA+AGG | 0.625324 | 1.3:-8276480 | MS.gene016068:CDS |
| TAAGAAGGATCTCGAAGCTG+TGG | 0.629352 | 1.3:-8274835 | MS.gene016068:CDS |
| GTTGATTGCTGGATCTAGTG+AGG | 0.632210 | 1.3:-8275225 | MS.gene016068:CDS |
| CAATACCATAATTGACAGCA+AGG | 0.634292 | 1.3:+8276337 | None:intergenic |
| CGTGTAGTAATGCTCTTCTG+TGG | 0.635161 | 1.3:-8272837 | MS.gene016068:CDS |
| TGCCTGAACCAAGCACTGTA+CGG | 0.635520 | 1.3:+8276140 | None:intergenic |
| ATCATAACCAACCTGTTGTG+AGG | 0.639858 | 1.3:+8276005 | None:intergenic |
| AGAAGGTATTCAGATGCTCA+AGG | 0.641602 | 1.3:-8274582 | MS.gene016068:intron |
| TTGATTGCTGGATCTAGTGA+GGG | 0.644845 | 1.3:-8275224 | MS.gene016068:CDS |
| ACTCCAAAGCCACCGTGTGG+TGG | 0.646949 | 1.3:+8272870 | None:intergenic |
| CATCATGGTGCAATCCTGAG+TGG | 0.650761 | 1.3:+8272774 | None:intergenic |
| CGACATCGACAATAGACTCA+CGG | 0.651944 | 1.3:+8276067 | None:intergenic |
| GAATCTTCTGCTCTAAACAC+AGG | 0.652142 | 1.3:+8275083 | None:intergenic |
| AGATATGGTGTACCACCACA+CGG | 0.671410 | 1.3:-8272882 | MS.gene016068:CDS |
| TATAGGTTGAAATCCAAGTG+AGG | 0.674003 | 1.3:-8275869 | MS.gene016068:intron |
| GCAATCCTGAGTGGGTCACG+TGG | 0.689157 | 1.3:+8272783 | None:intergenic |
| AATACCATAATTGACAGCAA+GGG | 0.690003 | 1.3:+8276338 | None:intergenic |
| TGGCGGCGGCAACTTCTCGG+CGG | 0.706873 | 1.3:+8276397 | None:intergenic |
| CCTACTCCAAAGCCACCGTG+TGG | 0.729566 | 1.3:+8272867 | None:intergenic |
| CCAGTCGTTGACATTGACAG+GGG | 0.731951 | 1.3:+8276287 | None:intergenic |
| AGTATCTTCCAAATACTCTG+CGG | 0.740430 | 1.3:-8274616 | MS.gene016068:CDS |
| TATGGTGTACCACCACACGG+TGG | 0.820152 | 1.3:-8272879 | MS.gene016068:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATAATATTAGAGAAAAT+AGG | + | chr1.3:8273865-8273884 | None:intergenic | 15.0% |
| !! | ATTATATAAATGTCATTGAA+AGG | - | chr1.3:8274977-8274996 | MS.gene016068:intron | 15.0% |
| !! | TAACTATGATATATATAAGA+TGG | - | chr1.3:8275576-8275595 | MS.gene016068:intron | 15.0% |
| !! | TTTCAATTTAATTCAAGAAA+AGG | - | chr1.3:8275200-8275219 | MS.gene016068:CDS | 15.0% |
| !! | TTTCTTGAATTAAATTGAAA+AGG | + | chr1.3:8275200-8275219 | None:intergenic | 15.0% |
| !!! | GATTTTGATTTTGATTATAA+TGG | - | chr1.3:8273365-8273384 | MS.gene016068:CDS | 15.0% |
| !!! | TCTGGTTATAATAATTTTAT+GGG | - | chr1.3:8276329-8276348 | MS.gene016068:CDS | 15.0% |
| !! | AAATTGATGAAAATGTACTT+GGG | - | chr1.3:8275019-8275038 | MS.gene016068:CDS | 20.0% |
| !! | AACCAAATAATTGTTACTAT+TGG | - | chr1.3:8275170-8275189 | MS.gene016068:CDS | 20.0% |
| !! | AATAGTAACAATTATTTGGT+TGG | + | chr1.3:8275171-8275190 | None:intergenic | 20.0% |
| !! | AATGAATATATATACCTGAA+TGG | + | chr1.3:8273519-8273538 | None:intergenic | 20.0% |
| !! | ACCAAATAATTGTTACTATT+GGG | - | chr1.3:8275171-8275190 | MS.gene016068:CDS | 20.0% |
| !! | ATCAAGAAATTGTTACTATT+GGG | - | chr1.3:8275358-8275377 | MS.gene016068:intron | 20.0% |
| !! | GATTAAGAAACATTATTATG+AGG | - | chr1.3:8274268-8274287 | MS.gene016068:intron | 20.0% |
| !! | TAAATTGATGAAAATGTACT+TGG | - | chr1.3:8275018-8275037 | MS.gene016068:CDS | 20.0% |
| !! | TCAATTACAACATTTCTAAT+CGG | + | chr1.3:8273543-8273562 | None:intergenic | 20.0% |
| !! | TCAATTTATTTGTTTGTAGT+GGG | - | chr1.3:8274546-8274565 | MS.gene016068:intron | 20.0% |
| !! | TGTAATTCTATTTATAGGTA+TGG | - | chr1.3:8275825-8275844 | MS.gene016068:CDS | 20.0% |
| !! | TTCAATTTATTTGTTTGTAG+TGG | - | chr1.3:8274545-8274564 | MS.gene016068:intron | 20.0% |
| !!! | CATTTCTTAAGTTAGTTTAT+CGG | + | chr1.3:8273949-8273968 | None:intergenic | 20.0% |
| !!! | CTCTGGTTATAATAATTTTA+TGG | - | chr1.3:8276328-8276347 | MS.gene016068:CDS | 20.0% |
| !!! | CTGGTTATAATAATTTTATG+GGG | - | chr1.3:8276330-8276349 | MS.gene016068:CDS | 20.0% |
| !!! | TCAATTTTACAAAATAGACA+GGG | + | chr1.3:8274822-8274841 | None:intergenic | 20.0% |
| !!! | TGTCTATTTTGTAAAATTGA+GGG | - | chr1.3:8274822-8274841 | MS.gene016068:CDS | 20.0% |
| !!! | TGTTGTTTTGTTTAATATAC+TGG | - | chr1.3:8273669-8273688 | MS.gene016068:intron | 20.0% |
| ! | AAACAAATTAACACCTTTAG+GGG | + | chr1.3:8274488-8274507 | None:intergenic | 25.0% |
| ! | ACATTATTATGAGGTACATT+TGG | - | chr1.3:8274277-8274296 | MS.gene016068:intron | 25.0% |
| ! | AGGACATATAGTTATTTGAT+TGG | - | chr1.3:8275220-8275239 | MS.gene016068:CDS | 25.0% |
| ! | ATCAGAAACAAAAAGCAAAA+AGG | - | chr1.3:8272820-8272839 | MS.gene016068:CDS | 25.0% |
| ! | CAAACAAATTAACACCTTTA+GGG | + | chr1.3:8274489-8274508 | None:intergenic | 25.0% |
| ! | CATCAAGAAATTGTTACTAT+TGG | - | chr1.3:8275357-8275376 | MS.gene016068:intron | 25.0% |
| ! | CCAAATAATTGTTACTATTG+GGG | - | chr1.3:8275172-8275191 | MS.gene016068:CDS | 25.0% |
| ! | GATAAACAAACAAATGTGAT+AGG | - | chr1.3:8274759-8274778 | MS.gene016068:intron | 25.0% |
| ! | GTTCAATGTCTTTGTTAATA+CGG | - | chr1.3:8276279-8276298 | MS.gene016068:CDS | 25.0% |
| ! | TATAAGATTAAACTGTACAC+AGG | + | chr1.3:8274877-8274896 | None:intergenic | 25.0% |
| ! | TCAAGAAATTGTTACTATTG+GGG | - | chr1.3:8275359-8275378 | MS.gene016068:intron | 25.0% |
| ! | TCGACTGTAATTCTATTTAT+AGG | - | chr1.3:8275820-8275839 | MS.gene016068:CDS | 25.0% |
| ! | TGATTGATCATTTACAGATA+TGG | - | chr1.3:8276380-8276399 | MS.gene016068:CDS | 25.0% |
| ! | TTCAATGTCTTTGTTAATAC+GGG | - | chr1.3:8276280-8276299 | MS.gene016068:CDS | 25.0% |
| ! | TTTAAACTTCACTACAAGAT+TGG | + | chr1.3:8274927-8274946 | None:intergenic | 25.0% |
| ! | TTTAGTCATTTCATTGATGA+TGG | - | chr1.3:8275098-8275117 | MS.gene016068:CDS | 25.0% |
| ! | TTTGAACACAAAATGTAAGA+AGG | - | chr1.3:8274427-8274446 | MS.gene016068:intron | 25.0% |
| !! | AACTTAAGAAATGCATTTTG+CGG | - | chr1.3:8273956-8273975 | MS.gene016068:intron | 25.0% |
| !! | AATGCTTTGTTATGACAATT+TGG | - | chr1.3:8275990-8276009 | MS.gene016068:intron | 25.0% |
| !! | AGTTATAAAAGATTTGAGAC+AGG | + | chr1.3:8275755-8275774 | None:intergenic | 25.0% |
| !! | CTAAATGAGATCTCATTTTA+TGG | + | chr1.3:8275083-8275102 | None:intergenic | 25.0% |
| !! | CTCAATTTTACAAAATAGAC+AGG | + | chr1.3:8274823-8274842 | None:intergenic | 25.0% |
| !! | CTGTCTATTTTGTAAAATTG+AGG | - | chr1.3:8274821-8274840 | MS.gene016068:CDS | 25.0% |
| !! | GTCTATTTTGTAAAATTGAG+GGG | - | chr1.3:8274823-8274842 | MS.gene016068:CDS | 25.0% |
| !! | GTTATAAAAGATTTGAGACA+GGG | + | chr1.3:8275754-8275773 | None:intergenic | 25.0% |
| !! | GTTATGATATCTTGTTACTT+AGG | - | chr1.3:8273287-8273306 | MS.gene016068:intron | 25.0% |
| !! | TGGAATTTTCAAAAATTGGA+GGG | + | chr1.3:8275151-8275170 | None:intergenic | 25.0% |
| !! | TGGTTGGAATTTTCAAAAAT+TGG | + | chr1.3:8275155-8275174 | None:intergenic | 25.0% |
| !! | TTGGAATTTTCAAAAATTGG+AGG | + | chr1.3:8275152-8275171 | None:intergenic | 25.0% |
| !!! | ACTGATACTTTTCTGTTTTT+TGG | - | chr1.3:8274357-8274376 | MS.gene016068:intron | 25.0% |
| !!! | CTAAAGGTGTTAATTTGTTT+GGG | - | chr1.3:8274488-8274507 | MS.gene016068:intron | 25.0% |
| !!! | GTTGATGGTGATTTTTTAAT+TGG | - | chr1.3:8273714-8273733 | MS.gene016068:intron | 25.0% |
| !!! | TGATCAATCATTTAGTTTTC+TGG | + | chr1.3:8276370-8276389 | None:intergenic | 25.0% |
| !!! | TTGATTATAATGGTGTTATG+TGG | - | chr1.3:8273375-8273394 | MS.gene016068:CDS | 25.0% |
| AAGTGAAGTTGAAATTGAGA+AGG | - | chr1.3:8273493-8273512 | MS.gene016068:intron | 30.0% | |
| AATACCATAATTGACAGCAA+GGG | + | chr1.3:8272942-8272961 | None:intergenic | 30.0% | |
| ACACACATCTTTAATCAGAA+AGG | + | chr1.3:8273645-8273664 | None:intergenic | 30.0% | |
| CAAAAGAGTTACTGTAGTTT+GGG | + | chr1.3:8275923-8275942 | None:intergenic | 30.0% | |
| CAAGTTAGTGACACTTATTT+AGG | - | chr1.3:8275247-8275266 | MS.gene016068:CDS | 30.0% | |
| CCAAACAAATTAACACCTTT+AGG | + | chr1.3:8274490-8274509 | None:intergenic | 30.0% | |
| CCCCAATAGTAACAATTATT+TGG | + | chr1.3:8275175-8275194 | None:intergenic | 30.0% | |
| TCAAAAGAGTTACTGTAGTT+TGG | + | chr1.3:8275924-8275943 | None:intergenic | 30.0% | |
| TTCTTAGTCATCAGAGAAAA+TGG | - | chr1.3:8273109-8273128 | MS.gene016068:CDS | 30.0% | |
| TTTACATCAAGACTCAGAAA+AGG | - | chr1.3:8275540-8275559 | MS.gene016068:intron | 30.0% | |
| TTTGTGAGTTGTGATTGTTT+AGG | - | chr1.3:8273343-8273362 | MS.gene016068:CDS | 30.0% | |
| ! | ATGTCAATATGTGGTGATTT+TGG | - | chr1.3:8274152-8274171 | MS.gene016068:intron | 30.0% |
| ! | TATGGAAGTACAAACACATT+TGG | + | chr1.3:8276059-8276078 | None:intergenic | 30.0% |
| ! | TATTTTGTAAAATTGAGGGG+TGG | - | chr1.3:8274826-8274845 | MS.gene016068:CDS | 30.0% |
| ! | TCTTAAGTTAGTTTATCGGT+AGG | + | chr1.3:8273945-8273964 | None:intergenic | 30.0% |
| !! | CCTAAAGGTGTTAATTTGTT+TGG | - | chr1.3:8274487-8274506 | MS.gene016068:intron | 30.0% |
| !! | TAGCAAGGCATTGTATAAAA+TGG | + | chr1.3:8275894-8275913 | None:intergenic | 30.0% |
| !! | TTCATTGATGATGGTAGTTT+GGG | - | chr1.3:8275107-8275126 | MS.gene016068:CDS | 30.0% |
| !! | TTTCATTGATGATGGTAGTT+TGG | - | chr1.3:8275106-8275125 | MS.gene016068:CDS | 30.0% |
| !! | TTTCCTCTTGTAGTTAGTTT+TGG | - | chr1.3:8275304-8275323 | MS.gene016068:intron | 30.0% |
| !!! | ATACTTTTCTGTTTTTTGGC+AGG | - | chr1.3:8274361-8274380 | MS.gene016068:intron | 30.0% |
| !!! | ATTACTTTTCTAAAACCAGC+TGG | + | chr1.3:8275730-8275749 | None:intergenic | 30.0% |
| !!! | TATGTGGTTTTGTTCTCTAT+AGG | - | chr1.3:8273391-8273410 | MS.gene016068:CDS | 30.0% |
| !!! | TTCCTCTTGTAGTTAGTTTT+GGG | - | chr1.3:8275305-8275324 | MS.gene016068:intron | 30.0% |
| AACTATTGTTGAGGAATTCC+TGG | - | chr1.3:8275275-8275294 | MS.gene016068:CDS | 35.0% | |
| ACAAAGACATTGAACACGAT+AGG | + | chr1.3:8276274-8276293 | None:intergenic | 35.0% | |
| ACTATTGTTGAGGAATTCCT+GGG | - | chr1.3:8275276-8275295 | MS.gene016068:CDS | 35.0% | |
| ACTTGAATACTGAAGCAGAA+AGG | - | chr1.3:8275696-8275715 | MS.gene016068:intron | 35.0% | |
| AGTATCTTCCAAATACTCTG+CGG | - | chr1.3:8274661-8274680 | MS.gene016068:intron | 35.0% | |
| ATACCATAATTGACAGCAAG+GGG | + | chr1.3:8272941-8272960 | None:intergenic | 35.0% | |
| CAAATGTGATAGGATGATGA+TGG | - | chr1.3:8274769-8274788 | MS.gene016068:intron | 35.0% | |
| CAATACCATAATTGACAGCA+AGG | + | chr1.3:8272943-8272962 | None:intergenic | 35.0% | |
| CACAAGCAAATGTCAATATG+TGG | - | chr1.3:8274143-8274162 | MS.gene016068:intron | 35.0% | |
| CACCATCAACATTCATGTAA+GGG | + | chr1.3:8273704-8273723 | None:intergenic | 35.0% | |
| CAGAAGATTCCTTTACTCAT+AGG | - | chr1.3:8274207-8274226 | MS.gene016068:intron | 35.0% | |
| CTTTGTTAATACGGGTGTTT+AGG | - | chr1.3:8276288-8276307 | MS.gene016068:CDS | 35.0% | |
| GAAACTGTATTGTGTGAGTA+AGG | - | chr1.3:8273430-8273449 | MS.gene016068:CDS | 35.0% | |
| GAAGATACTGCACATTCATA+GGG | + | chr1.3:8274650-8274669 | None:intergenic | 35.0% | |
| GGAATTCCTCAACAATAGTT+AGG | + | chr1.3:8275275-8275294 | None:intergenic | 35.0% | |
| TACAGGTCTTGATGTTGAAA+TGG | - | chr1.3:8274244-8274263 | MS.gene016068:intron | 35.0% | |
| TAGGTTCCTAACTATTGTTG+AGG | - | chr1.3:8275266-8275285 | MS.gene016068:CDS | 35.0% | |
| TCACCATCAACATTCATGTA+AGG | + | chr1.3:8273705-8273724 | None:intergenic | 35.0% | |
| TCAGTATTCAAGTCACCAAA+AGG | + | chr1.3:8275689-8275708 | None:intergenic | 35.0% | |
| TTACATTTCCAACTTGAGAC+TGG | + | chr1.3:8273840-8273859 | None:intergenic | 35.0% | |
| ! | CCATAAAAGCTGAAGCTTTT+GGG | - | chr1.3:8276074-8276093 | MS.gene016068:CDS | 35.0% |
| ! | CTATTCAATCCTTGTTGCTT+AGG | - | chr1.3:8276116-8276135 | MS.gene016068:CDS | 35.0% |
| ! | GAGTAATGATTTTGCTTTGC+AGG | - | chr1.3:8275643-8275662 | MS.gene016068:intron | 35.0% |
| ! | GCACGCAATTAATCATGTTT+TGG | - | chr1.3:8276014-8276033 | MS.gene016068:intron | 35.0% |
| ! | TAAAATGGTCTTACAGCCAA+CGG | + | chr1.3:8275879-8275898 | None:intergenic | 35.0% |
| ! | TATAGGTTGAAATCCAAGTG+AGG | - | chr1.3:8273408-8273427 | MS.gene016068:CDS | 35.0% |
| ! | TATCCACATGCCTGAATTTT+TGG | - | chr1.3:8276166-8276185 | MS.gene016068:CDS | 35.0% |
| ! | TCCATAAAAGCTGAAGCTTT+TGG | - | chr1.3:8276073-8276092 | MS.gene016068:CDS | 35.0% |
| ! | TCTTTTGATGTCTTCATTCG+AGG | - | chr1.3:8275936-8275955 | MS.gene016068:intron | 35.0% |
| ! | TGGAAGTTTAAGCACTGTTA+GGG | - | chr1.3:8274846-8274865 | MS.gene016068:CDS | 35.0% |
| ! | TTTGCGTTTGAAATTGTCGA+GGG | - | chr1.3:8274320-8274339 | MS.gene016068:intron | 35.0% |
| !! | TCATTGATGATGGTAGTTTG+GGG | - | chr1.3:8275108-8275127 | MS.gene016068:CDS | 35.0% |
| !! | TGGAAAATTCCTTGATTTGC+TGG | + | chr1.3:8273814-8273833 | None:intergenic | 35.0% |
| !!! | ATTTTTTAATTGGTGCAGGC+TGG | - | chr1.3:8273724-8273743 | MS.gene016068:intron | 35.0% |
| !!! | GGTGATTTTTTAATTGGTGC+AGG | - | chr1.3:8273720-8273739 | MS.gene016068:intron | 35.0% |
| !!! | TGTAGTTAGTTTTGGGAGTT+TGG | - | chr1.3:8275312-8275331 | MS.gene016068:intron | 35.0% |
| !!! | TTCTGTTTTTTGGCAGGTTA+TGG | - | chr1.3:8274367-8274386 | MS.gene016068:intron | 35.0% |
| AATCATTGAGAGCCTCAACT+CGG | + | chr1.3:8273018-8273037 | None:intergenic | 40.0% | |
| ACTGAAGCAGAAAGGAAACT+AGG | - | chr1.3:8275704-8275723 | MS.gene016068:intron | 40.0% | |
| ATAACCAGAGCTCAGTAAGA+GGG | + | chr1.3:8276318-8276337 | None:intergenic | 40.0% | |
| ATCATAACCAACCTGTTGTG+AGG | + | chr1.3:8273275-8273294 | None:intergenic | 40.0% | |
| ATTAATCGGCAGAGTAGGAA+TGG | + | chr1.3:8273456-8273475 | None:intergenic | 40.0% | |
| CACAATACAGTTTCCTCACT+TGG | + | chr1.3:8273424-8273443 | None:intergenic | 40.0% | |
| CAGAGTTCTATATCCTTCAC+CGG | - | chr1.3:8275850-8275869 | MS.gene016068:CDS | 40.0% | |
| CAGGACCAATCTCAAAAACA+CGG | + | chr1.3:8274178-8274197 | None:intergenic | 40.0% | |
| CTACAATCAAGATGAGAGTG+TGG | - | chr1.3:8273577-8273596 | MS.gene016068:CDS | 40.0% | |
| CTAGATCCAGCAATCAACTT+AGG | + | chr1.3:8274050-8274069 | None:intergenic | 40.0% | |
| CTATTGTTGAGGAATTCCTG+GGG | - | chr1.3:8275277-8275296 | MS.gene016068:CDS | 40.0% | |
| CTCCCAAAACTAACTACAAG+AGG | + | chr1.3:8275310-8275329 | None:intergenic | 40.0% | |
| CTCCCTTACATGAATGTTGA+TGG | - | chr1.3:8273699-8273718 | MS.gene016068:intron | 40.0% | |
| CTTCCAAAAATTCAGGCATG+TGG | + | chr1.3:8276172-8276191 | None:intergenic | 40.0% | |
| GAAAATGTACTTGGGTAGAC+AGG | - | chr1.3:8275027-8275046 | MS.gene016068:CDS | 40.0% | |
| GACAGGGATAAAAGACGTAA+AGG | + | chr1.3:8274806-8274825 | None:intergenic | 40.0% | |
| GACATTTGCTTGTGAAGTTG+AGG | + | chr1.3:8274137-8274156 | None:intergenic | 40.0% | |
| GCACGTTCTTCCAAAAATTC+AGG | + | chr1.3:8276179-8276198 | None:intergenic | 40.0% | |
| GCAGCATCCTCGATATTAAT+CGG | + | chr1.3:8273470-8273489 | None:intergenic | 40.0% | |
| GGAAGATACTGCACATTCAT+AGG | + | chr1.3:8274651-8274670 | None:intergenic | 40.0% | |
| TACAAGAGGAAAAATACCCC+AGG | + | chr1.3:8275296-8275315 | None:intergenic | 40.0% | |
| TATAACCAGAGCTCAGTAAG+AGG | + | chr1.3:8276319-8276338 | None:intergenic | 40.0% | |
| TCGATATTAATCGGCAGAGT+AGG | + | chr1.3:8273461-8273480 | None:intergenic | 40.0% | |
| TCTTTAGGCTGGACTACAAA+GGG | - | chr1.3:8274087-8274106 | MS.gene016068:intron | 40.0% | |
| TGAAATTGAGAAGGCCATTC+AGG | - | chr1.3:8273502-8273521 | MS.gene016068:intron | 40.0% | |
| TTAGGCGAGGAGATAATATC+AGG | - | chr1.3:8276134-8276153 | MS.gene016068:CDS | 40.0% | |
| TTGATTGCTGGATCTAGTGA+GGG | - | chr1.3:8274053-8274072 | MS.gene016068:intron | 40.0% | |
| ! | AAAATGGTCTTACAGCCAAC+GGG | + | chr1.3:8275878-8275897 | None:intergenic | 40.0% |
| ! | AACACCTTTAGGGGTTCAAA+CGG | + | chr1.3:8274479-8274498 | None:intergenic | 40.0% |
| ! | ACAACTTGTTCGTGTGAATC+AGG | - | chr1.3:8273750-8273769 | MS.gene016068:intron | 40.0% |
| ! | ACACATTTGGAGAAGCATGA+TGG | + | chr1.3:8276046-8276065 | None:intergenic | 40.0% |
| ! | ATGCATTTTGCGGTGTGATA+CGG | - | chr1.3:8273966-8273985 | MS.gene016068:intron | 40.0% |
| ! | CCCAAAAGCTTCAGCTTTTA+TGG | + | chr1.3:8276077-8276096 | None:intergenic | 40.0% |
| ! | GAATCTTCTGCTCTAAACAC+AGG | + | chr1.3:8274197-8274216 | None:intergenic | 40.0% |
| ! | GATTTTGCTTTGCAGGAAGT+TGG | - | chr1.3:8275650-8275669 | MS.gene016068:intron | 40.0% |
| ! | GGAGTAGAGATTGAACCTTT+TGG | - | chr1.3:8275671-8275690 | MS.gene016068:intron | 40.0% |
| ! | GTGGAAGTTTAAGCACTGTT+AGG | - | chr1.3:8274845-8274864 | MS.gene016068:CDS | 40.0% |
| ! | GTTGCTGCTTGTAAGTTTGT+TGG | - | chr1.3:8273911-8273930 | MS.gene016068:intron | 40.0% |
| ! | GTTTGCGTTTGAAATTGTCG+AGG | - | chr1.3:8274319-8274338 | MS.gene016068:intron | 40.0% |
| ! | TACTCTGCCGATTAATATCG+AGG | - | chr1.3:8273460-8273479 | MS.gene016068:intron | 40.0% |
| ! | TATGTAAGCCGCAGAGTATT+TGG | + | chr1.3:8274672-8274691 | None:intergenic | 40.0% |
| ! | TGTTGTGAGGCACCTTTAAT+AGG | + | chr1.3:8273262-8273281 | None:intergenic | 40.0% |
| !! | AGAAGGTATTCAGATGCTCA+AGG | - | chr1.3:8274695-8274714 | MS.gene016068:intron | 40.0% |
| !! | ATGTGATAGGATGATGATGG+CGG | - | chr1.3:8274772-8274791 | MS.gene016068:intron | 40.0% |
| !! | CTGCTTACATCGATTCTTTC+AGG | - | chr1.3:8276231-8276250 | MS.gene016068:CDS | 40.0% |
| !! | TAGTTTGGGTTGTCATAGCA+AGG | + | chr1.3:8275909-8275928 | None:intergenic | 40.0% |
| !! | TATTAAAGGTGCCTCACAAC+AGG | - | chr1.3:8273261-8273280 | MS.gene016068:intron | 40.0% |
| !!! | TTTGGCCGTGTTTTTGAGAT+TGG | - | chr1.3:8274170-8274189 | MS.gene016068:intron | 40.0% |
| AAGCAAAAAGGCCTGCAAGA+AGG | - | chr1.3:8272832-8272851 | MS.gene016068:CDS | 45.0% | |
| AGATATGGTGTACCACCACA+CGG | - | chr1.3:8276395-8276414 | MS.gene016068:CDS | 45.0% | |
| ATCATTGAGAGCCTCAACTC+GGG | + | chr1.3:8273017-8273036 | None:intergenic | 45.0% | |
| ATCTGCGGACTCACTAAATC+AGG | + | chr1.3:8273166-8273185 | None:intergenic | 45.0% | |
| ATTCCAGCCGCTCCTATTAA+AGG | - | chr1.3:8273247-8273266 | MS.gene016068:intron | 45.0% | |
| CACAAGCTATTCGACCAGTT+GGG | - | chr1.3:8273074-8273093 | MS.gene016068:CDS | 45.0% | |
| CAGCAATCAACTTAGGAGTG+TGG | + | chr1.3:8274043-8274062 | None:intergenic | 45.0% | |
| CGACATCGACAATAGACTCA+CGG | + | chr1.3:8273213-8273232 | None:intergenic | 45.0% | |
| CGTGTAGTAATGCTCTTCTG+TGG | - | chr1.3:8276440-8276459 | MS.gene016068:CDS | 45.0% | |
| CTGCGGCTTACATATGAAGA+AGG | - | chr1.3:8274678-8274697 | MS.gene016068:intron | 45.0% | |
| GAGTCTATTGTCGATGTCGA+AGG | - | chr1.3:8273214-8273233 | MS.gene016068:intron | 45.0% | |
| GCACAGATGCCTATGAGTAA+AGG | + | chr1.3:8274219-8274238 | None:intergenic | 45.0% | |
| GTCTTTAGGCTGGACTACAA+AGG | - | chr1.3:8274086-8274105 | MS.gene016068:intron | 45.0% | |
| GTTGATTGCTGGATCTAGTG+AGG | - | chr1.3:8274052-8274071 | MS.gene016068:intron | 45.0% | |
| TAACCAGAGCTCAGTAAGAG+GGG | + | chr1.3:8276317-8276336 | None:intergenic | 45.0% | |
| TAAGAAGGATCTCGAAGCTG+TGG | - | chr1.3:8274442-8274461 | MS.gene016068:intron | 45.0% | |
| TATTGTCGATGTCGAAGGTG+TGG | - | chr1.3:8273219-8273238 | MS.gene016068:intron | 45.0% | |
| TCATTACTCGCTGCAAGACA+AGG | + | chr1.3:8275632-8275651 | None:intergenic | 45.0% | |
| TCCAGTCGTTGACATTGACA+GGG | + | chr1.3:8272994-8273013 | None:intergenic | 45.0% | |
| TGAGGCTCTCAATGATTCAC+TGG | - | chr1.3:8273021-8273040 | MS.gene016068:intron | 45.0% | |
| TGATTCACTGGAGAACAAGC+CGG | - | chr1.3:8273033-8273052 | MS.gene016068:intron | 45.0% | |
| TGATTTAGTGAGTCCGCAGA+TGG | - | chr1.3:8273165-8273184 | MS.gene016068:intron | 45.0% | |
| TTCCAACTTGAGACTGGATG+TGG | + | chr1.3:8273834-8273853 | None:intergenic | 45.0% | |
| TTCCACATCCAGTCTCAAGT+TGG | - | chr1.3:8273829-8273848 | MS.gene016068:intron | 45.0% | |
| TTCGATTGGAGCTCAATGAG+CGG | + | chr1.3:8272968-8272987 | None:intergenic | 45.0% | |
| TTTAATAGGAGCGGCTGGAA+TGG | + | chr1.3:8273248-8273267 | None:intergenic | 45.0% | |
| ! | ACACCTTTAGGGGTTCAAAC+GGG | + | chr1.3:8274478-8274497 | None:intergenic | 45.0% |
| ! | GATCCCCTTGCTGTCAATTA+TGG | - | chr1.3:8272935-8272954 | MS.gene016068:intron | 45.0% |
| ! | TGAGGCACCTTTAATAGGAG+CGG | + | chr1.3:8273257-8273276 | None:intergenic | 45.0% |
| !! | CACACTCCTAAGTTGATTGC+TGG | - | chr1.3:8274041-8274060 | MS.gene016068:intron | 45.0% |
| AACGCCATCTTCTTCCCAAC+TGG | + | chr1.3:8273091-8273110 | None:intergenic | 50.0% | |
| AATAGACTCACGGCTGAGAG+CGG | + | chr1.3:8273203-8273222 | None:intergenic | 50.0% | |
| AGAAAGGAAACTAGGCCAGC+TGG | - | chr1.3:8275712-8275731 | MS.gene016068:intron | 50.0% | |
| AGAGAGAGTCGATGTAGCAG+AGG | + | chr1.3:8272906-8272925 | None:intergenic | 50.0% | |
| AGGCATCTGTGCGAGTTTAC+AGG | - | chr1.3:8274227-8274246 | MS.gene016068:intron | 50.0% | |
| ATCTCCTCGCCTAAGCAACA+AGG | + | chr1.3:8276128-8276147 | None:intergenic | 50.0% | |
| ATTGCTGGATCTAGTGAGGG+TGG | - | chr1.3:8274056-8274075 | MS.gene016068:intron | 50.0% | |
| CATTGACAGGGGTCTTCGAT+TGG | + | chr1.3:8272982-8273001 | None:intergenic | 50.0% | |
| CCAGTCGTTGACATTGACAG+GGG | + | chr1.3:8272993-8273012 | None:intergenic | 50.0% | |
| CTGCGAACACCAGCAAATCA+AGG | - | chr1.3:8273802-8273821 | MS.gene016068:intron | 50.0% | |
| GAAGAACGTGCACAAGCTTG+CGG | - | chr1.3:8276188-8276207 | MS.gene016068:CDS | 50.0% | |
| GATCCTTCCGATGACAGTGT+CGG | + | chr1.3:8272803-8272822 | None:intergenic | 50.0% | |
| GCACAAGCTATTCGACCAGT+TGG | - | chr1.3:8273073-8273092 | MS.gene016068:CDS | 50.0% | |
| GCGGCAAATTTCACCATCTG+CGG | + | chr1.3:8273181-8273200 | None:intergenic | 50.0% | |
| GTACCCGTTTGAACCCCTAA+AGG | - | chr1.3:8274472-8274491 | MS.gene016068:intron | 50.0% | |
| GTCCAGTCGTTGACATTGAC+AGG | + | chr1.3:8272995-8273014 | None:intergenic | 50.0% | |
| TCAAGAGCCGACACTGTCAT+CGG | - | chr1.3:8272793-8272812 | MS.gene016068:CDS | 50.0% | |
| TCGACCAGTTGGGAAGAAGA+TGG | - | chr1.3:8273084-8273103 | MS.gene016068:CDS | 50.0% | |
| TCGATTGGAGCTCAATGAGC+GGG | + | chr1.3:8272967-8272986 | None:intergenic | 50.0% | |
| TGGTTTCACCGTACAGTGCT+TGG | - | chr1.3:8273129-8273148 | MS.gene016068:CDS | 50.0% | |
| TTGCGGTGTGATACGGTGTT+GGG | - | chr1.3:8273973-8273992 | MS.gene016068:intron | 50.0% | |
| TTTATCCACGTGACCCACTC+AGG | - | chr1.3:8276489-8276508 | MS.gene016068:CDS | 50.0% | |
| TTTGCGGTGTGATACGGTGT+TGG | - | chr1.3:8273972-8273991 | MS.gene016068:intron | 50.0% | |
| ! | AACAAGCCGGTTCTAATCCG+TGG | - | chr1.3:8273046-8273065 | MS.gene016068:intron | 50.0% |
| ! | ACAAGCCGGTTCTAATCCGT+GGG | - | chr1.3:8273047-8273066 | MS.gene016068:CDS | 50.0% |
| ! | CAATCCTTGTTGCTTAGGCG+AGG | - | chr1.3:8276121-8276140 | MS.gene016068:CDS | 50.0% |
| ! | TGCCTGAACCAAGCACTGTA+CGG | + | chr1.3:8273140-8273159 | None:intergenic | 50.0% |
| !! | AAAGGTGCCTCACAACAGGT+TGG | - | chr1.3:8273265-8273284 | MS.gene016068:intron | 50.0% |
| !! | CTTGATTTGCTGGTGTTCGC+AGG | + | chr1.3:8273804-8273823 | None:intergenic | 50.0% |
| !!! | GCGTTGCTTTTCCAGCTTTG+CGG | + | chr1.3:8272861-8272880 | None:intergenic | 50.0% |
| AGGGTGGAGCTGCTGTCTTT+AGG | - | chr1.3:8274072-8274091 | MS.gene016068:intron | 55.0% | |
| AGTCGATGTAGCAGAGGTGG+CGG | + | chr1.3:8272900-8272919 | None:intergenic | 55.0% | |
| CAAGAAGGATGCCGCAAAGC+TGG | - | chr1.3:8272847-8272866 | MS.gene016068:CDS | 55.0% | |
| CACCGTACAGTGCTTGGTTC+AGG | - | chr1.3:8273135-8273154 | MS.gene016068:CDS | 55.0% | |
| CCCCTGTCAATGTCAACGAC+TGG | - | chr1.3:8272990-8273009 | MS.gene016068:intron | 55.0% | |
| CTTTGCGGCATCCTTCTTGC+AGG | + | chr1.3:8272846-8272865 | None:intergenic | 55.0% | |
| GAAGTTGAGGTGACTGAGCC+AGG | + | chr1.3:8274124-8274143 | None:intergenic | 55.0% | |
| GAGAGTCGATGTAGCAGAGG+TGG | + | chr1.3:8272903-8272922 | None:intergenic | 55.0% | |
| GCACCTTTAATAGGAGCGGC+TGG | + | chr1.3:8273253-8273272 | None:intergenic | 55.0% | |
| GTCTTACAGCCAACGGGTAC+CGG | + | chr1.3:8275872-8275891 | None:intergenic | 55.0% | |
| TATCCTTCACCGGTACCCGT+TGG | - | chr1.3:8275860-8275879 | MS.gene016068:CDS | 55.0% | |
| TATGGTGTACCACCACACGG+TGG | - | chr1.3:8276398-8276417 | MS.gene016068:CDS | 55.0% | |
| TGCACAAGCTTGCGGCATTG+AGG | - | chr1.3:8276196-8276215 | MS.gene016068:CDS | 55.0% | |
| TGGAGCTGCTGTCTTTAGGC+TGG | - | chr1.3:8274076-8274095 | MS.gene016068:intron | 55.0% | |
| ! | GAATAGCTTGTGCCCTCCCA+CGG | + | chr1.3:8273066-8273085 | None:intergenic | 55.0% |
| ! | GGTGTGATACGGTGTTGGGT+AGG | - | chr1.3:8273977-8273996 | MS.gene016068:intron | 55.0% |
| ACTCCAAAGCCACCGTGTGG+TGG | + | chr1.3:8276410-8276429 | None:intergenic | 60.0% | |
| CAAAGGGCAACCTGCATGCC+TGG | - | chr1.3:8274103-8274122 | MS.gene016068:intron | 60.0% | |
| CAACGACTGGACCCGAGTTG+AGG | - | chr1.3:8273003-8273022 | MS.gene016068:intron | 60.0% | |
| CCTACTCCAAAGCCACCGTG+TGG | + | chr1.3:8276413-8276432 | None:intergenic | 60.0% | |
| CTGCCCCTCTTACTGAGCTC+TGG | - | chr1.3:8276311-8276330 | MS.gene016068:CDS | 60.0% | |
| GAGCCGACACTGTCATCGGA+AGG | - | chr1.3:8272797-8272816 | MS.gene016068:CDS | 60.0% | |
| GCAATCCTGAGTGGGTCACG+TGG | + | chr1.3:8276497-8276516 | None:intergenic | 60.0% | |
| GTACCACCACACGGTGGCTT+TGG | - | chr1.3:8276404-8276423 | MS.gene016068:CDS | 60.0% | |
| ! | AGCCGGTTCTAATCCGTGGG+AGG | - | chr1.3:8273050-8273069 | MS.gene016068:CDS | 60.0% |
| ! | GCCGGTTCTAATCCGTGGGA+GGG | - | chr1.3:8273051-8273070 | MS.gene016068:CDS | 60.0% |
| !! | CCACACGGTGGCTTTGGAGT+AGG | - | chr1.3:8276410-8276429 | MS.gene016068:CDS | 60.0% |
| !! | CGGTGGCTTTGGAGTAGGCT+TGG | - | chr1.3:8276415-8276434 | MS.gene016068:CDS | 60.0% |
| !! | GCCCTCCCACGGATTAGAAC+CGG | + | chr1.3:8273055-8273074 | None:intergenic | 60.0% |
| AGACTCACGGCTGAGAGCGG+CGG | + | chr1.3:8273200-8273219 | None:intergenic | 65.0% | |
| GGTGACTGAGCCAGGCATGC+AGG | + | chr1.3:8274116-8274135 | None:intergenic | 65.0% | |
| ! | AGGTGGCGGCGGCAACTTCT+CGG | + | chr1.3:8272886-8272905 | None:intergenic | 65.0% |
| ! | CGATGTAGCAGAGGTGGCGG+CGG | + | chr1.3:8272897-8272916 | None:intergenic | 65.0% |
| !! | CAGCCAACGGGTACCGGTGA+AGG | + | chr1.3:8275866-8275885 | None:intergenic | 65.0% |
| TGGCGGCGGCAACTTCTCGG+CGG | + | chr1.3:8272883-8272902 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 8272776 | 8276523 | 8272776 | ID=MS.gene016068 |
| chr1.3 | mRNA | 8272776 | 8276523 | 8272776 | ID=MS.gene016068.t1;Parent=MS.gene016068 |
| chr1.3 | exon | 8276017 | 8276523 | 8276017 | ID=MS.gene016068.t1.exon1;Parent=MS.gene016068.t1 |
| chr1.3 | CDS | 8276017 | 8276523 | 8276017 | ID=cds.MS.gene016068.t1;Parent=MS.gene016068.t1 |
| chr1.3 | exon | 8275776 | 8275886 | 8275776 | ID=MS.gene016068.t1.exon2;Parent=MS.gene016068.t1 |
| chr1.3 | CDS | 8275776 | 8275886 | 8275776 | ID=cds.MS.gene016068.t1;Parent=MS.gene016068.t1 |
| chr1.3 | exon | 8275444 | 8275557 | 8275444 | ID=MS.gene016068.t1.exon3;Parent=MS.gene016068.t1 |
| chr1.3 | CDS | 8275444 | 8275557 | 8275444 | ID=cds.MS.gene016068.t1;Parent=MS.gene016068.t1 |
| chr1.3 | exon | 8275010 | 8275300 | 8275010 | ID=MS.gene016068.t1.exon4;Parent=MS.gene016068.t1 |
| chr1.3 | CDS | 8275010 | 8275300 | 8275010 | ID=cds.MS.gene016068.t1;Parent=MS.gene016068.t1 |
| chr1.3 | exon | 8274806 | 8274916 | 8274806 | ID=MS.gene016068.t1.exon5;Parent=MS.gene016068.t1 |
| chr1.3 | CDS | 8274806 | 8274916 | 8274806 | ID=cds.MS.gene016068.t1;Parent=MS.gene016068.t1 |
| chr1.3 | exon | 8274583 | 8274636 | 8274583 | ID=MS.gene016068.t1.exon6;Parent=MS.gene016068.t1 |
| chr1.3 | CDS | 8274583 | 8274636 | 8274583 | ID=cds.MS.gene016068.t1;Parent=MS.gene016068.t1 |
| chr1.3 | exon | 8273555 | 8273634 | 8273555 | ID=MS.gene016068.t1.exon7;Parent=MS.gene016068.t1 |
| chr1.3 | CDS | 8273555 | 8273634 | 8273555 | ID=cds.MS.gene016068.t1;Parent=MS.gene016068.t1 |
| chr1.3 | exon | 8273342 | 8273457 | 8273342 | ID=MS.gene016068.t1.exon8;Parent=MS.gene016068.t1 |
| chr1.3 | CDS | 8273342 | 8273457 | 8273342 | ID=cds.MS.gene016068.t1;Parent=MS.gene016068.t1 |
| chr1.3 | exon | 8273047 | 8273161 | 8273047 | ID=MS.gene016068.t1.exon9;Parent=MS.gene016068.t1 |
| chr1.3 | CDS | 8273047 | 8273161 | 8273047 | ID=cds.MS.gene016068.t1;Parent=MS.gene016068.t1 |
| chr1.3 | exon | 8272776 | 8272902 | 8272776 | ID=MS.gene016068.t1.exon10;Parent=MS.gene016068.t1 |
| chr1.3 | CDS | 8272776 | 8272902 | 8272776 | ID=cds.MS.gene016068.t1;Parent=MS.gene016068.t1 |
| Gene Sequence |
| Protein sequence |
