Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51584.t1 | XP_003588866.1 | 93.7 | 541 | 25 | 2 | 1 | 532 | 1 | 541 | 1.50E-269 | 938.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51584.t1 | Q9M084 | 67.0 | 500 | 148 | 2 | 50 | 532 | 59 | 558 | 4.3e-196 | 685.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51584.t1 | G7I885 | 93.7 | 541 | 25 | 2 | 1 | 532 | 1 | 541 | 1.1e-269 | 938.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51584.t1 | MTR_1g014140 | 94.096 | 542 | 21 | 3 | 1 | 532 | 1 | 541 | 0.0 | 1009 |
| MS.gene51584.t1 | MTR_5g028360 | 70.221 | 544 | 134 | 6 | 1 | 532 | 62 | 589 | 0.0 | 748 |
| MS.gene51584.t1 | MTR_4g100920 | 25.304 | 494 | 287 | 16 | 78 | 527 | 86 | 541 | 3.26e-30 | 124 |
| MS.gene51584.t1 | MTR_8g102050 | 30.961 | 281 | 174 | 8 | 262 | 529 | 275 | 548 | 4.12e-26 | 112 |
| MS.gene51584.t1 | MTR_7g101050 | 31.560 | 282 | 173 | 10 | 262 | 529 | 298 | 573 | 3.43e-25 | 109 |
| MS.gene51584.t1 | MTR_2g036600 | 23.984 | 492 | 325 | 15 | 72 | 524 | 107 | 588 | 2.88e-23 | 103 |
| MS.gene51584.t1 | MTR_4g127770 | 22.811 | 491 | 319 | 15 | 78 | 524 | 601 | 1075 | 2.29e-20 | 95.9 |
| MS.gene51584.t1 | MTR_4g127790 | 23.810 | 357 | 236 | 11 | 200 | 523 | 32 | 385 | 6.19e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51584.t1 | AT4G31180 | 63.375 | 557 | 177 | 4 | 3 | 532 | 2 | 558 | 0.0 | 722 |
| MS.gene51584.t1 | AT4G31180 | 63.375 | 557 | 177 | 4 | 3 | 532 | 2 | 558 | 0.0 | 722 |
| MS.gene51584.t1 | AT4G26870 | 64.648 | 512 | 173 | 3 | 26 | 532 | 24 | 532 | 0.0 | 684 |
| MS.gene51584.t1 | AT5G56680 | 30.466 | 279 | 174 | 8 | 262 | 527 | 296 | 567 | 5.37e-27 | 115 |
| MS.gene51584.t1 | AT4G17300 | 25.482 | 467 | 253 | 15 | 112 | 527 | 160 | 582 | 1.23e-26 | 114 |
| MS.gene51584.t1 | AT4G17300 | 25.482 | 467 | 253 | 15 | 112 | 527 | 140 | 562 | 1.91e-26 | 113 |
| MS.gene51584.t1 | AT1G70980 | 28.571 | 280 | 180 | 7 | 262 | 527 | 293 | 566 | 4.10e-23 | 103 |
| MS.gene51584.t1 | AT3G07420 | 24.907 | 269 | 188 | 8 | 266 | 525 | 368 | 631 | 5.94e-12 | 68.9 |
Find 130 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTACATTGATTCTTTC+AGG | 0.118251 | 1.4:-7838263 | MS.gene51584:intron |
| CAGCTTTGCGAGTTCCTTCT+TGG | 0.187183 | 1.4:+7841444 | None:intergenic |
| ATTCCAGCCGCTCCTATTAA+AGG | 0.200895 | 1.4:-7841061 | MS.gene51584:CDS |
| CACAAGCAAATGTCAATATT+TGG | 0.203397 | 1.4:-7840160 | MS.gene51584:CDS |
| TTCTTAGTCATCAGAGAAAA+TGG | 0.255342 | 1.4:-7841199 | MS.gene51584:CDS |
| CAAACAAATTAACACCTTTA+GGG | 0.270476 | 1.4:+7839817 | None:intergenic |
| TCAAAAGAGTTACTGTAGTT+TGG | 0.284688 | 1.4:+7838567 | None:intergenic |
| TATGTAAGCCGCAGAGTATT+TGG | 0.299031 | 1.4:+7839634 | None:intergenic |
| TGAAATTGAGAAGGCCATTC+AGG | 0.299926 | 1.4:-7840801 | MS.gene51584:intron |
| TGTTGTGAGGCACCTTTAAT+AGG | 0.308209 | 1.4:+7841049 | None:intergenic |
| TGGAAAATTCCTTGATTTGC+TGG | 0.311128 | 1.4:+7840492 | None:intergenic |
| AGGCATCTGTGCGAGTTTAC+AGG | 0.319353 | 1.4:-7840076 | MS.gene51584:CDS |
| CAAAAGAGTTACTGTAGTTT+GGG | 0.335107 | 1.4:+7838568 | None:intergenic |
| CACCGTACAGTGCTTGGTTC+AGG | 0.346864 | 1.4:-7841173 | MS.gene51584:CDS |
| CACAATACAGTTTCCTCACT+TGG | 0.354867 | 1.4:+7840882 | None:intergenic |
| CAGAAGATTCCTTTACTCAT+AGG | 0.359787 | 1.4:-7840096 | MS.gene51584:CDS |
| CACACTCCTAAGTTGATTGC+TGG | 0.375345 | 1.4:-7840262 | MS.gene51584:CDS |
| TCAACTTCGGTCCAGTCGTC+AGG | 0.376176 | 1.4:+7841307 | None:intergenic |
| TAGCAAGGCATTGTATAAAA+TGG | 0.394303 | 1.4:+7838597 | None:intergenic |
| AGGTGGCGGCGGCAACTTCT+CGG | 0.397158 | 1.4:+7841404 | None:intergenic |
| GTACCACCACACGGTGGCTT+TGG | 0.402704 | 1.4:-7838045 | MS.gene51584:CDS |
| ACAACTTGTTCGTGTGAATC+AGG | 0.411639 | 1.4:-7840553 | MS.gene51584:CDS |
| TACAGGTCTTGATGTTGAAA+TGG | 0.423398 | 1.4:-7840059 | MS.gene51584:CDS |
| CAAGAAGGAACTCGCAAAGC+TGG | 0.423555 | 1.4:-7841443 | MS.gene51584:CDS |
| CAAAGGGAAACCTGCATGCC+TGG | 0.426932 | 1.4:-7840200 | MS.gene51584:CDS |
| AGGGTGGAGCTGCTGTCTTT+AGG | 0.428133 | 1.4:-7840231 | MS.gene51584:CDS |
| GGAGTAGAGATTGAACCTTT+TGG | 0.442706 | 1.4:-7838817 | MS.gene51584:CDS |
| AACACCTTTAGGGGTTCAAA+CGG | 0.444877 | 1.4:+7839827 | None:intergenic |
| ATCTGCGGACTCACTAAATC+AGG | 0.450583 | 1.4:+7841145 | None:intergenic |
| CTTGATTTGCTGGTGTTCGC+AGG | 0.452358 | 1.4:+7840502 | None:intergenic |
| TGGAGCTGCTGTCTTTAGGC+TGG | 0.464922 | 1.4:-7840227 | MS.gene51584:CDS |
| GATTAAGAAACATTATTATG+AGG | 0.466183 | 1.4:-7840035 | MS.gene51584:intron |
| TTAGGTGAGGAGATAATATC+AGG | 0.470682 | 1.4:-7838360 | MS.gene51584:intron |
| TATTAAAGGTGCCTCACAAC+AGG | 0.473545 | 1.4:-7841047 | MS.gene51584:intron |
| GAGTCTATTGTCGATGTTGA+AGG | 0.473757 | 1.4:-7841094 | MS.gene51584:CDS |
| TTACAGTTCCAACTTGAGAC+TGG | 0.475421 | 1.4:+7840466 | None:intergenic |
| AATGCCATCTTCTTCCCAAC+TGG | 0.476125 | 1.4:+7841220 | None:intergenic |
| CTTTGCGAGTTCCTTCTTGG+AGG | 0.479823 | 1.4:+7841447 | None:intergenic |
| TGAGATTCTGAAGTTGACAT+TGG | 0.488423 | 1.4:+7841508 | None:intergenic |
| CGGTGGCTTTGGAGTAGGCT+TGG | 0.490259 | 1.4:-7838034 | MS.gene51584:CDS |
| GCAGCATCCTCGATATTAAA+CGG | 0.494569 | 1.4:+7840836 | None:intergenic |
| TGAGGCTCTCAATGATTCAC+TGG | 0.499024 | 1.4:-7841287 | MS.gene51584:CDS |
| TGGTTTCACCGTACAGTGCT+TGG | 0.499781 | 1.4:-7841179 | MS.gene51584:CDS |
| TTTGTTTCTGATGACAGTGT+CGG | 0.500363 | 1.4:+7841481 | None:intergenic |
| AAAATGGTCTTACAGCCAAC+GGG | 0.502027 | 1.4:+7838613 | None:intergenic |
| GTCTTACAGCCAACGGGTAC+CGG | 0.506627 | 1.4:+7838619 | None:intergenic |
| TCAGTATTCAAGTCACCAAA+AGG | 0.506705 | 1.4:+7838802 | None:intergenic |
| TCATTGAGCTCCCTGACGAC+TGG | 0.506929 | 1.4:-7841318 | MS.gene51584:CDS |
| CTAGATCCAGCAATCAACTT+AGG | 0.510006 | 1.4:+7840256 | None:intergenic |
| GGTGACTGAGCCAGGCATGC+AGG | 0.511713 | 1.4:+7840190 | None:intergenic |
| TTTAATAGGAGCGGCTGGAA+TGG | 0.513685 | 1.4:+7841063 | None:intergenic |
| GCACCTTTAATAGGAGCGGC+TGG | 0.516328 | 1.4:+7841058 | None:intergenic |
| CACAAGCTATTCGACCAGTT+GGG | 0.517268 | 1.4:-7841234 | MS.gene51584:CDS |
| GCACAAGCTATTCGACCAGT+TGG | 0.517849 | 1.4:-7841235 | MS.gene51584:CDS |
| TTCCACATCCAGTCTCAAGT+TGG | 0.521976 | 1.4:-7840474 | MS.gene51584:CDS |
| ACACCTTTAGGGGTTCAAAC+GGG | 0.524064 | 1.4:+7839828 | None:intergenic |
| CAGCCAACGGGTACCGGTGA+AGG | 0.524085 | 1.4:+7838625 | None:intergenic |
| CTGCGGCTTACATATGAAGA+AGG | 0.526092 | 1.4:-7839625 | MS.gene51584:CDS |
| AATGGATATATATACCTGAA+TGG | 0.529761 | 1.4:+7840787 | None:intergenic |
| GAAACTGTATTGTGTGAGTA+AGG | 0.532678 | 1.4:-7840873 | MS.gene51584:CDS |
| AAACAAATTAACACCTTTAG+GGG | 0.533347 | 1.4:+7839818 | None:intergenic |
| GAATAGCTTGTGCCCTCCCA+CGG | 0.535699 | 1.4:+7841245 | None:intergenic |
| CTGCGAACACCAGCAAATCA+AGG | 0.537117 | 1.4:-7840501 | MS.gene51584:CDS |
| GAAGTTGAGGTGACTGAGCC+AGG | 0.538658 | 1.4:+7840182 | None:intergenic |
| TCTTTAGGCTGGACTACAAA+GGG | 0.538957 | 1.4:-7840216 | MS.gene51584:CDS |
| AGAAAGGAAACTAGGCCAGC+TGG | 0.539715 | 1.4:-7838776 | MS.gene51584:CDS |
| TACTCTGCCGTTTAATATCG+AGG | 0.540763 | 1.4:-7840843 | MS.gene51584:CDS |
| AACAAGCAGGTTCTAATCCG+TGG | 0.542895 | 1.4:-7841262 | MS.gene51584:CDS |
| CGATGTAGCAGAGGTGGCGG+CGG | 0.543849 | 1.4:+7841393 | None:intergenic |
| TCGATATTAAACGGCAGAGT+AGG | 0.544830 | 1.4:+7840845 | None:intergenic |
| CGGCGGCAACTTCTCGGCGG+CGG | 0.544898 | 1.4:+7841410 | None:intergenic |
| CCACACGGTGGCTTTGGAGT+AGG | 0.547341 | 1.4:-7838039 | MS.gene51584:CDS |
| TTTGAACACAAAATGTAAGA+AGG | 0.547679 | 1.4:-7839876 | MS.gene51584:CDS |
| TAAAATGGTCTTACAGCCAA+CGG | 0.552316 | 1.4:+7838612 | None:intergenic |
| CGTCAGGGAGCTCAATGAGC+GGG | 0.553502 | 1.4:+7841323 | None:intergenic |
| GACATTTGCTTGTGAAGTTG+AGG | 0.558674 | 1.4:+7840169 | None:intergenic |
| GCACAGATGCCTATGAGTAA+AGG | 0.560403 | 1.4:+7840087 | None:intergenic |
| TTCCAACTTGAGACTGGATG+TGG | 0.562506 | 1.4:+7840472 | None:intergenic |
| AGTCGATGTAGCAGAGGTGG+CGG | 0.572655 | 1.4:+7841390 | None:intergenic |
| CAGAGTTCTATATCCTTCAC+CGG | 0.573477 | 1.4:-7838638 | MS.gene51584:CDS |
| ATTAAACGGCAGAGTAGGAA+TGG | 0.575600 | 1.4:+7840850 | None:intergenic |
| TAGTTTGGGTTGTCATAGCA+AGG | 0.575643 | 1.4:+7838582 | None:intergenic |
| GAAGAACGTGCACAAGCTTG+CGG | 0.577219 | 1.4:-7838306 | MS.gene51584:CDS |
| TCGACCAGTTGGGAAGAAGA+TGG | 0.581394 | 1.4:-7841224 | MS.gene51584:CDS |
| AGACTCACGGCTGAGAGCGG+CGG | 0.581736 | 1.4:+7841111 | None:intergenic |
| TGCACAAGCTTGCGGCATTG+AGG | 0.583418 | 1.4:-7838298 | MS.gene51584:CDS |
| ACTGAAGCAGAAAGGAAACT+AGG | 0.584857 | 1.4:-7838784 | MS.gene51584:CDS |
| GAGAGTCGATGTAGCAGAGG+TGG | 0.585897 | 1.4:+7841387 | None:intergenic |
| TGATTCACTGGAGAACAAGC+AGG | 0.586415 | 1.4:-7841275 | MS.gene51584:CDS |
| GTCTTTAGGCTGGACTACAA+AGG | 0.586503 | 1.4:-7840217 | MS.gene51584:CDS |
| AAACCATAATTGACAGCAAG+GGG | 0.592667 | 1.4:+7841349 | None:intergenic |
| ACTTGAATACTGAAGCAGAA+AGG | 0.595013 | 1.4:-7838792 | MS.gene51584:CDS |
| TGACGACTGGACCGAAGTTG+AGG | 0.595296 | 1.4:-7841305 | MS.gene51584:CDS |
| TGATTTAGTGAGTCCGCAGA+TGG | 0.596877 | 1.4:-7841143 | MS.gene51584:CDS |
| GTACCCGTTTGAACCCCTAA+AGG | 0.597654 | 1.4:-7839831 | MS.gene51584:intron |
| CAACTTCGGTCCAGTCGTCA+GGG | 0.601964 | 1.4:+7841308 | None:intergenic |
| AGAGAGAGTCGATGTAGCAG+AGG | 0.603238 | 1.4:+7841384 | None:intergenic |
| ATCATTGAGAGCCTCAACTT+CGG | 0.607801 | 1.4:+7841294 | None:intergenic |
| ATCAAAACCAACCTGTTGTG+AGG | 0.608593 | 1.4:+7841036 | None:intergenic |
| TGAGGCACCTTTAATAGGAG+CGG | 0.608618 | 1.4:+7841054 | None:intergenic |
| TATCCTTCACCGGTACCCGT+TGG | 0.609544 | 1.4:-7838628 | MS.gene51584:CDS |
| CAGCAATCAACTTAGGAGTG+TGG | 0.611888 | 1.4:+7840263 | None:intergenic |
| GCGGCAAATTTCACCATCTG+CGG | 0.614321 | 1.4:+7841130 | None:intergenic |
| ATTGCTGGATCTAGTGAGGG+TGG | 0.614640 | 1.4:-7840247 | MS.gene51584:CDS |
| ACAAGCAGGTTCTAATCCGT+GGG | 0.615661 | 1.4:-7841261 | MS.gene51584:CDS |
| TATTGTCGATGTTGAAGGTG+TGG | 0.616511 | 1.4:-7841089 | MS.gene51584:CDS |
| AGCAGGTTCTAATCCGTGGG+AGG | 0.619320 | 1.4:-7841258 | MS.gene51584:CDS |
| ATCATGGTGCAATCCTGAGT+GGG | 0.620490 | 1.4:+7837947 | None:intergenic |
| AATAGACTCACGGCTGAGAG+CGG | 0.623488 | 1.4:+7841108 | None:intergenic |
| AAGTGAAGTTGAAATTGAGA+AGG | 0.624126 | 1.4:-7840810 | MS.gene51584:CDS |
| TAAGAAGGATCTCGAAGCTG+TGG | 0.629352 | 1.4:-7839861 | MS.gene51584:CDS |
| GTTGATTGCTGGATCTAGTG+AGG | 0.632210 | 1.4:-7840251 | MS.gene51584:CDS |
| CAACATCGACAATAGACTCA+CGG | 0.632667 | 1.4:+7841098 | None:intergenic |
| CGTGTAGTAATGCTCTTCTG+TGG | 0.635161 | 1.4:-7838009 | MS.gene51584:CDS |
| TGCCTGAACCAAGCACTGTA+CGG | 0.635520 | 1.4:+7841171 | None:intergenic |
| GCAGGTTCTAATCCGTGGGA+GGG | 0.639094 | 1.4:-7841257 | MS.gene51584:CDS |
| AGAAGGTATTCAGATGCTCA+AGG | 0.641602 | 1.4:-7839608 | MS.gene51584:intron |
| TTGATTGCTGGATCTAGTGA+GGG | 0.644845 | 1.4:-7840250 | MS.gene51584:CDS |
| ACTCCAAAGCCACCGTGTGG+TGG | 0.646949 | 1.4:+7838042 | None:intergenic |
| CATCATGGTGCAATCCTGAG+TGG | 0.650761 | 1.4:+7837946 | None:intergenic |
| TCGTCAGGGAGCTCAATGAG+CGG | 0.662590 | 1.4:+7841322 | None:intergenic |
| AGATATGGTGTACCACCACA+CGG | 0.671410 | 1.4:-7838054 | MS.gene51584:CDS |
| AAAACCATAATTGACAGCAA+GGG | 0.671638 | 1.4:+7841348 | None:intergenic |
| TATAGGTTGAAATCCAAGTG+AGG | 0.674003 | 1.4:-7840895 | MS.gene51584:intron |
| GCAATCCTGAGTGGGTCACG+TGG | 0.678111 | 1.4:+7837955 | None:intergenic |
| TGGCGGCGGCAACTTCTCGG+CGG | 0.684255 | 1.4:+7841407 | None:intergenic |
| CCTACTCCAAAGCCACCGTG+TGG | 0.729566 | 1.4:+7838039 | None:intergenic |
| AACCATAATTGACAGCAAGG+GGG | 0.738850 | 1.4:+7841350 | None:intergenic |
| AGTATCTTCCAAATACTCTG+CGG | 0.740430 | 1.4:-7839642 | MS.gene51584:CDS |
| TATGGTGTACCACCACACGG+TGG | 0.820152 | 1.4:-7838051 | MS.gene51584:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATAATATTAGAGAAAAT+AGG | + | chr1.4:7839015-7839034 | None:intergenic | 15.0% |
| !! | ATTATATAAATGTCATTGAA+AGG | - | chr1.4:7840129-7840148 | MS.gene51584:CDS | 15.0% |
| !! | TAACTATGATATATATAAGA+TGG | - | chr1.4:7840541-7840560 | MS.gene51584:CDS | 15.0% |
| !! | TTTCAATTTAATTCAAGAAA+AGG | - | chr1.4:7840352-7840371 | MS.gene51584:intron | 15.0% |
| !! | TTTCTTGAATTAAATTGAAA+AGG | + | chr1.4:7840352-7840371 | None:intergenic | 15.0% |
| !!! | ATAATTTTAAACTTTACTAC+AGG | + | chr1.4:7840084-7840103 | None:intergenic | 15.0% |
| !!! | GATTTTGATTTTGATTATAA+TGG | - | chr1.4:7838515-7838534 | MS.gene51584:intron | 15.0% |
| !! | AAATTGATGAAAATGTACTT+GGG | - | chr1.4:7840171-7840190 | MS.gene51584:CDS | 20.0% |
| !! | AACCAAATAATTGTTACTAT+TGG | - | chr1.4:7840322-7840341 | MS.gene51584:intron | 20.0% |
| !! | AATAGTAACAATTATTTGGT+TGG | + | chr1.4:7840323-7840342 | None:intergenic | 20.0% |
| !! | ACCAAATAATTGTTACTATT+GGG | - | chr1.4:7840323-7840342 | MS.gene51584:intron | 20.0% |
| !! | GATTAAGAAACATTATTATG+AGG | - | chr1.4:7839418-7839437 | MS.gene51584:intron | 20.0% |
| !! | TAAATTGATGAAAATGTACT+TGG | - | chr1.4:7840170-7840189 | MS.gene51584:CDS | 20.0% |
| !! | TCAATTACAACATTTCTAAT+CGG | + | chr1.4:7838693-7838712 | None:intergenic | 20.0% |
| !! | TCAATTTATTTGTTTGTAGT+GGG | - | chr1.4:7839696-7839715 | MS.gene51584:intron | 20.0% |
| !! | TGTAATTCTATTTATAGGTA+TGG | - | chr1.4:7840790-7840809 | MS.gene51584:intron | 20.0% |
| !! | TTCAATTTATTTGTTTGTAG+TGG | - | chr1.4:7839695-7839714 | MS.gene51584:intron | 20.0% |
| !!! | CATTTCTTAAGTTAGTTTAT+CGG | + | chr1.4:7839099-7839118 | None:intergenic | 20.0% |
| !!! | TCAATTTTACAAAATAGACA+GGG | + | chr1.4:7839972-7839991 | None:intergenic | 20.0% |
| !!! | TCTATTTTGTAAAATTGAGA+GGG | - | chr1.4:7839974-7839993 | MS.gene51584:intron | 20.0% |
| !!! | TCTGGTTATAATGATTTTAT+GGG | - | chr1.4:7841333-7841352 | MS.gene51584:CDS | 20.0% |
| !!! | TGTTGTTTTGTTTAATATAC+CGG | - | chr1.4:7838819-7838838 | MS.gene51584:CDS | 20.0% |
| ! | AAACAAATTAACACCTTTAG+GGG | + | chr1.4:7839638-7839657 | None:intergenic | 25.0% |
| ! | AATGGATATATATACCTGAA+TGG | + | chr1.4:7838669-7838688 | None:intergenic | 25.0% |
| ! | ACATTATTATGAGGTACATT+TGG | - | chr1.4:7839427-7839446 | MS.gene51584:intron | 25.0% |
| ! | AGGACATATAGTTATTTGAT+TGG | - | chr1.4:7840372-7840391 | MS.gene51584:intron | 25.0% |
| ! | ATCAGAAACAAAAAGCAAAA+AGG | - | chr1.4:7837983-7838002 | MS.gene51584:CDS | 25.0% |
| ! | CAAACAAATTAACACCTTTA+GGG | + | chr1.4:7839639-7839658 | None:intergenic | 25.0% |
| ! | CCAAATAATTGTTACTATTG+GGG | - | chr1.4:7840324-7840343 | MS.gene51584:intron | 25.0% |
| ! | GATAAACAAACAAATGTGAT+AGG | - | chr1.4:7839909-7839928 | MS.gene51584:CDS | 25.0% |
| ! | GTTCAATGTCTTTGTTAATA+CGG | - | chr1.4:7841283-7841302 | MS.gene51584:CDS | 25.0% |
| ! | TATAAGATTAAACTGTACAC+AGG | + | chr1.4:7840029-7840048 | None:intergenic | 25.0% |
| ! | TCGACTGTAATTCTATTTAT+AGG | - | chr1.4:7840785-7840804 | MS.gene51584:intron | 25.0% |
| ! | TGATTGATCATTTACAGATA+TGG | - | chr1.4:7841384-7841403 | MS.gene51584:CDS | 25.0% |
| ! | TTCAATGTCTTTGTTAATAC+GGG | - | chr1.4:7841284-7841303 | MS.gene51584:CDS | 25.0% |
| ! | TTTAAACTTTACTACAGGAT+TGG | + | chr1.4:7840079-7840098 | None:intergenic | 25.0% |
| ! | TTTAGTCATTTCATTGATGA+TGG | - | chr1.4:7840250-7840269 | MS.gene51584:CDS | 25.0% |
| ! | TTTGAACACAAAATGTAAGA+AGG | - | chr1.4:7839577-7839596 | MS.gene51584:intron | 25.0% |
| !! | AACTTAAGAAATGCATTTTG+CGG | - | chr1.4:7839106-7839125 | MS.gene51584:intron | 25.0% |
| !! | AGTTATAAAAGATTTGAGAC+AGG | + | chr1.4:7840720-7840739 | None:intergenic | 25.0% |
| !! | CTAAATGAGATCTCATTTTA+TGG | + | chr1.4:7840235-7840254 | None:intergenic | 25.0% |
| !! | CTATTTTGTAAAATTGAGAG+GGG | - | chr1.4:7839975-7839994 | MS.gene51584:intron | 25.0% |
| !! | CTCAATTTTACAAAATAGAC+AGG | + | chr1.4:7839973-7839992 | None:intergenic | 25.0% |
| !! | CTCTGGTTATAATGATTTTA+TGG | - | chr1.4:7841332-7841351 | MS.gene51584:CDS | 25.0% |
| !! | CTGGTTATAATGATTTTATG+GGG | - | chr1.4:7841334-7841353 | MS.gene51584:CDS | 25.0% |
| !! | GTCTATTTTGTAAAATTGAG+AGG | - | chr1.4:7839973-7839992 | MS.gene51584:intron | 25.0% |
| !! | GTTATAAAAGATTTGAGACA+GGG | + | chr1.4:7840719-7840738 | None:intergenic | 25.0% |
| !! | TATGGAAGTACAAACAAATT+TGG | + | chr1.4:7841018-7841037 | None:intergenic | 25.0% |
| !! | TGGAATTTTCAAAAATTGGA+GGG | + | chr1.4:7840303-7840322 | None:intergenic | 25.0% |
| !! | TGGTTGGAATTTTCAAAAAT+TGG | + | chr1.4:7840307-7840326 | None:intergenic | 25.0% |
| !! | TTGGAATTTTCAAAAATTGG+AGG | + | chr1.4:7840304-7840323 | None:intergenic | 25.0% |
| !!! | ACTGATACTTTTCTGTTTTT+TGG | - | chr1.4:7839507-7839526 | MS.gene51584:intron | 25.0% |
| !!! | CTAAAGGTGTTAATTTGTTT+GGG | - | chr1.4:7839638-7839657 | MS.gene51584:CDS | 25.0% |
| !!! | TGATCAATCATTTAGTTTTC+TGG | + | chr1.4:7841374-7841393 | None:intergenic | 25.0% |
| !!! | TTGATTATAATGGTGTTATG+TGG | - | chr1.4:7838525-7838544 | MS.gene51584:intron | 25.0% |
| AAAAACCATAATTGACAGCA+AGG | + | chr1.4:7838109-7838128 | None:intergenic | 30.0% | |
| AAAACCATAATTGACAGCAA+GGG | + | chr1.4:7838108-7838127 | None:intergenic | 30.0% | |
| AAGAATCAATGTAAGCAGAT+AGG | + | chr1.4:7841188-7841207 | None:intergenic | 30.0% | |
| AAGTGAAGTTGAAATTGAGA+AGG | - | chr1.4:7838643-7838662 | MS.gene51584:CDS | 30.0% | |
| AATCACAAAACCTAAGTAAC+AGG | + | chr1.4:7838445-7838464 | None:intergenic | 30.0% | |
| AATGCTTTGGTATGACAATT+TGG | - | chr1.4:7840955-7840974 | MS.gene51584:intron | 30.0% | |
| ACAACATTTCTAATCGGTAA+TGG | + | chr1.4:7838687-7838706 | None:intergenic | 30.0% | |
| ACACACATCTTTAATCAGAA+AGG | + | chr1.4:7838795-7838814 | None:intergenic | 30.0% | |
| CAAAAGAGTTACTGTAGTTT+GGG | + | chr1.4:7840888-7840907 | None:intergenic | 30.0% | |
| CAAGTTAGTGACACTTATTT+AGG | - | chr1.4:7840399-7840418 | MS.gene51584:intron | 30.0% | |
| CACAAGCAAATGTCAATATT+TGG | - | chr1.4:7839293-7839312 | MS.gene51584:intron | 30.0% | |
| CCAAACAAATTAACACCTTT+AGG | + | chr1.4:7839640-7839659 | None:intergenic | 30.0% | |
| CCCCAATAGTAACAATTATT+TGG | + | chr1.4:7840327-7840346 | None:intergenic | 30.0% | |
| TCAAAAGAGTTACTGTAGTT+TGG | + | chr1.4:7840889-7840908 | None:intergenic | 30.0% | |
| TTCTTAGTCATCAGAGAAAA+TGG | - | chr1.4:7838254-7838273 | MS.gene51584:intron | 30.0% | |
| TTTACATCAAGACTCAGAAA+AGG | - | chr1.4:7840505-7840524 | MS.gene51584:CDS | 30.0% | |
| TTTGTGAGTTGTGATTGTTT+AGG | - | chr1.4:7838487-7838506 | MS.gene51584:intron | 30.0% | |
| ! | TATTTTGTCATGCAATGCTT+TGG | - | chr1.4:7840942-7840961 | MS.gene51584:intron | 30.0% |
| ! | TCTTAAGTTAGTTTATCGGT+AGG | + | chr1.4:7839095-7839114 | None:intergenic | 30.0% |
| !! | CCTAAAGGTGTTAATTTGTT+TGG | - | chr1.4:7839637-7839656 | MS.gene51584:CDS | 30.0% |
| !! | GTTTTGATATCCTGTTACTT+AGG | - | chr1.4:7838432-7838451 | MS.gene51584:intron | 30.0% |
| !! | TAGCAAGGCATTGTATAAAA+TGG | + | chr1.4:7840859-7840878 | None:intergenic | 30.0% |
| !! | TTCATTGATGATGGTAGTTT+GGG | - | chr1.4:7840259-7840278 | MS.gene51584:CDS | 30.0% |
| !! | TTTCATTGATGATGGTAGTT+TGG | - | chr1.4:7840258-7840277 | MS.gene51584:CDS | 30.0% |
| !! | TTTCCTCTTGTAGTTAGTTT+TGG | - | chr1.4:7840456-7840475 | MS.gene51584:intron | 30.0% |
| !!! | ATACTTTTCTGTTTTTTGGC+AGG | - | chr1.4:7839511-7839530 | MS.gene51584:intron | 30.0% |
| !!! | ATTACTTTTCTAAAACCAGC+TGG | + | chr1.4:7840695-7840714 | None:intergenic | 30.0% |
| !!! | GTTGATGGTGATTTTTTAAC+TGG | - | chr1.4:7838864-7838883 | MS.gene51584:intron | 30.0% |
| !!! | TATGTGGTTTTGTTCTCTAT+AGG | - | chr1.4:7838541-7838560 | MS.gene51584:intron | 30.0% |
| !!! | TTCCTCTTGTAGTTAGTTTT+GGG | - | chr1.4:7840457-7840476 | MS.gene51584:intron | 30.0% |
| AAACCATAATTGACAGCAAG+GGG | + | chr1.4:7838107-7838126 | None:intergenic | 35.0% | |
| AACTATTGTTGAGGAATTCC+TGG | - | chr1.4:7840427-7840446 | MS.gene51584:intron | 35.0% | |
| ACAAAGACATTGAACACGAT+AGG | + | chr1.4:7841278-7841297 | None:intergenic | 35.0% | |
| ACTATTGTTGAGGAATTCCT+GGG | - | chr1.4:7840428-7840447 | MS.gene51584:intron | 35.0% | |
| ACTTGAATACTGAAGCAGAA+AGG | - | chr1.4:7840661-7840680 | MS.gene51584:intron | 35.0% | |
| AGTATCTTCCAAATACTCTG+CGG | - | chr1.4:7839811-7839830 | MS.gene51584:intron | 35.0% | |
| CAAATGTGATAGGATGATGA+TGG | - | chr1.4:7839919-7839938 | MS.gene51584:CDS | 35.0% | |
| CACCATCAACATTCATGTAA+GGG | + | chr1.4:7838854-7838873 | None:intergenic | 35.0% | |
| CAGAAGATTCCTTTACTCAT+AGG | - | chr1.4:7839357-7839376 | MS.gene51584:intron | 35.0% | |
| CTTTGTTAATACGGGTGTTT+AGG | - | chr1.4:7841292-7841311 | MS.gene51584:CDS | 35.0% | |
| GAAACTGTATTGTGTGAGTA+AGG | - | chr1.4:7838580-7838599 | MS.gene51584:CDS | 35.0% | |
| GAAGATACTGCACATTCATA+GGG | + | chr1.4:7839800-7839819 | None:intergenic | 35.0% | |
| GGAATTCCTCAACAATAGTT+AGG | + | chr1.4:7840427-7840446 | None:intergenic | 35.0% | |
| TACAGGTCTTGATGTTGAAA+TGG | - | chr1.4:7839394-7839413 | MS.gene51584:intron | 35.0% | |
| TAGGTTCCTAACTATTGTTG+AGG | - | chr1.4:7840418-7840437 | MS.gene51584:intron | 35.0% | |
| TCACCATCAACATTCATGTA+AGG | + | chr1.4:7838855-7838874 | None:intergenic | 35.0% | |
| TCAGTATTCAAGTCACCAAA+AGG | + | chr1.4:7840654-7840673 | None:intergenic | 35.0% | |
| TTAGGTGAGGAGATAATATC+AGG | - | chr1.4:7841093-7841112 | MS.gene51584:CDS | 35.0% | |
| ! | CCATAAAAGCTGAAGCTTTT+GGG | - | chr1.4:7841033-7841052 | MS.gene51584:intron | 35.0% |
| ! | GAGTAATGATTTTGCTTTGC+AGG | - | chr1.4:7840608-7840627 | MS.gene51584:intron | 35.0% |
| ! | GCACGCAATTAATCATGTTT+TGG | - | chr1.4:7840979-7840998 | MS.gene51584:intron | 35.0% |
| ! | TAAAATGGTCTTACAGCCAA+CGG | + | chr1.4:7840844-7840863 | None:intergenic | 35.0% |
| ! | TATAGGTTGAAATCCAAGTG+AGG | - | chr1.4:7838558-7838577 | MS.gene51584:CDS | 35.0% |
| ! | TATCCACATGCCTGAATTTT+TGG | - | chr1.4:7841125-7841144 | MS.gene51584:CDS | 35.0% |
| ! | TCCATAAAAGCTGAAGCTTT+TGG | - | chr1.4:7841032-7841051 | MS.gene51584:intron | 35.0% |
| ! | TCTTTTGATGTCTTCATTCG+AGG | - | chr1.4:7840901-7840920 | MS.gene51584:intron | 35.0% |
| ! | TTTGCGTTTGAAATTGTCGA+GGG | - | chr1.4:7839470-7839489 | MS.gene51584:intron | 35.0% |
| ! | TTTTGTAAAATTGAGAGGGG+TGG | - | chr1.4:7839978-7839997 | MS.gene51584:intron | 35.0% |
| !! | CTGCTTACATTGATTCTTTC+AGG | - | chr1.4:7841190-7841209 | MS.gene51584:CDS | 35.0% |
| !! | TCATTGATGATGGTAGTTTG+GGG | - | chr1.4:7840260-7840279 | MS.gene51584:CDS | 35.0% |
| !! | TGGAAAATTCCTTGATTTGC+TGG | + | chr1.4:7838964-7838983 | None:intergenic | 35.0% |
| !! | TTTGTTTCTGATGACAGTGT+CGG | + | chr1.4:7837975-7837994 | None:intergenic | 35.0% |
| !!! | TGTAGTTAGTTTTGGGAGTT+TGG | - | chr1.4:7840464-7840483 | MS.gene51584:intron | 35.0% |
| !!! | TTCTGTTTTTTGGCAGGTTA+TGG | - | chr1.4:7839517-7839536 | MS.gene51584:intron | 35.0% |
| AACCATAATTGACAGCAAGG+GGG | + | chr1.4:7838106-7838125 | None:intergenic | 40.0% | |
| ACTGAAGCAGAAAGGAAACT+AGG | - | chr1.4:7840669-7840688 | MS.gene51584:intron | 40.0% | |
| ATCAAAACCAACCTGTTGTG+AGG | + | chr1.4:7838420-7838439 | None:intergenic | 40.0% | |
| ATCATTGAGAGCCTCAACTT+CGG | + | chr1.4:7838162-7838181 | None:intergenic | 40.0% | |
| ATTAAACGGCAGAGTAGGAA+TGG | + | chr1.4:7838606-7838625 | None:intergenic | 40.0% | |
| CAACATCGACAATAGACTCA+CGG | + | chr1.4:7838358-7838377 | None:intergenic | 40.0% | |
| CACAATACAGTTTCCTCACT+TGG | + | chr1.4:7838574-7838593 | None:intergenic | 40.0% | |
| CAGAGTTCTATATCCTTCAC+CGG | - | chr1.4:7840815-7840834 | MS.gene51584:CDS | 40.0% | |
| CAGCACCAATCTCAAAAACA+CGG | + | chr1.4:7839328-7839347 | None:intergenic | 40.0% | |
| CTACAATCAAGATGAGAGTG+TGG | - | chr1.4:7838727-7838746 | MS.gene51584:intron | 40.0% | |
| CTAGATCCAGCAATCAACTT+AGG | + | chr1.4:7839200-7839219 | None:intergenic | 40.0% | |
| CTATTGTTGAGGAATTCCTG+GGG | - | chr1.4:7840429-7840448 | MS.gene51584:intron | 40.0% | |
| CTCCCAAAACTAACTACAAG+AGG | + | chr1.4:7840462-7840481 | None:intergenic | 40.0% | |
| CTCCCTTACATGAATGTTGA+TGG | - | chr1.4:7838849-7838868 | MS.gene51584:intron | 40.0% | |
| CTTCCAAAAATTCAGGCATG+TGG | + | chr1.4:7841131-7841150 | None:intergenic | 40.0% | |
| GAAAATGTACTTGGGTAGAC+AGG | - | chr1.4:7840179-7840198 | MS.gene51584:CDS | 40.0% | |
| GACAGGGATAAAAGACGTAA+AGG | + | chr1.4:7839956-7839975 | None:intergenic | 40.0% | |
| GACATTTGCTTGTGAAGTTG+AGG | + | chr1.4:7839287-7839306 | None:intergenic | 40.0% | |
| GAGTCTATTGTCGATGTTGA+AGG | - | chr1.4:7838359-7838378 | MS.gene51584:CDS | 40.0% | |
| GCACGTTCTTCCAAAAATTC+AGG | + | chr1.4:7841138-7841157 | None:intergenic | 40.0% | |
| GCAGCATCCTCGATATTAAA+CGG | + | chr1.4:7838620-7838639 | None:intergenic | 40.0% | |
| GGAAGATACTGCACATTCAT+AGG | + | chr1.4:7839801-7839820 | None:intergenic | 40.0% | |
| TACAAGAGGAAAAATACCCC+AGG | + | chr1.4:7840448-7840467 | None:intergenic | 40.0% | |
| TATTGTCGATGTTGAAGGTG+TGG | - | chr1.4:7838364-7838383 | MS.gene51584:intron | 40.0% | |
| TCGATATTAAACGGCAGAGT+AGG | + | chr1.4:7838611-7838630 | None:intergenic | 40.0% | |
| TCTTTAGGCTGGACTACAAA+GGG | - | chr1.4:7839237-7839256 | MS.gene51584:intron | 40.0% | |
| TGAAATTGAGAAGGCCATTC+AGG | - | chr1.4:7838652-7838671 | MS.gene51584:intron | 40.0% | |
| TTACAGTTCCAACTTGAGAC+TGG | + | chr1.4:7838990-7839009 | None:intergenic | 40.0% | |
| TTGATTGCTGGATCTAGTGA+GGG | - | chr1.4:7839203-7839222 | MS.gene51584:intron | 40.0% | |
| ! | AAAATGGTCTTACAGCCAAC+GGG | + | chr1.4:7840843-7840862 | None:intergenic | 40.0% |
| ! | AACACCTTTAGGGGTTCAAA+CGG | + | chr1.4:7839629-7839648 | None:intergenic | 40.0% |
| ! | ACAACTTGTTCGTGTGAATC+AGG | - | chr1.4:7838900-7838919 | MS.gene51584:intron | 40.0% |
| ! | ATGCATTTTGCGGTGTGATA+CGG | - | chr1.4:7839116-7839135 | MS.gene51584:intron | 40.0% |
| ! | CCCAAAAGCTTCAGCTTTTA+TGG | + | chr1.4:7841036-7841055 | None:intergenic | 40.0% |
| ! | CTATGCAATCCTTGTTGCTT+AGG | - | chr1.4:7841075-7841094 | MS.gene51584:CDS | 40.0% |
| ! | GATTTTGCTTTGCAGGAAGT+TGG | - | chr1.4:7840615-7840634 | MS.gene51584:intron | 40.0% |
| ! | GGAGTAGAGATTGAACCTTT+TGG | - | chr1.4:7840636-7840655 | MS.gene51584:intron | 40.0% |
| ! | GTTGCTGCTTGTAAGTTTGT+TGG | - | chr1.4:7839061-7839080 | MS.gene51584:intron | 40.0% |
| ! | GTTTGCGTTTGAAATTGTCG+AGG | - | chr1.4:7839469-7839488 | MS.gene51584:intron | 40.0% |
| ! | TACTCTGCCGTTTAATATCG+AGG | - | chr1.4:7838610-7838629 | MS.gene51584:CDS | 40.0% |
| ! | TATGTAAGCCGCAGAGTATT+TGG | + | chr1.4:7839822-7839841 | None:intergenic | 40.0% |
| ! | TGTTGTGAGGCACCTTTAAT+AGG | + | chr1.4:7838407-7838426 | None:intergenic | 40.0% |
| !! | AGAAGGTATTCAGATGCTCA+AGG | - | chr1.4:7839845-7839864 | MS.gene51584:CDS | 40.0% |
| !! | ATGTGATAGGATGATGATGG+CGG | - | chr1.4:7839922-7839941 | MS.gene51584:CDS | 40.0% |
| !! | TAGTTTGGGTTGTCATAGCA+AGG | + | chr1.4:7840874-7840893 | None:intergenic | 40.0% |
| !! | TATTAAAGGTGCCTCACAAC+AGG | - | chr1.4:7838406-7838425 | MS.gene51584:intron | 40.0% |
| !! | TGGAAGTTTAAGCACTGGTA+GGG | - | chr1.4:7839998-7840017 | MS.gene51584:intron | 40.0% |
| !!! | ATTTTTTAACTGGTGCAGGC+TGG | - | chr1.4:7838874-7838893 | MS.gene51584:intron | 40.0% |
| !!! | GGTGATTTTTTAACTGGTGC+AGG | - | chr1.4:7838870-7838889 | MS.gene51584:intron | 40.0% |
| AAGCAAAAAGGCCTCCAAGA+AGG | - | chr1.4:7837995-7838014 | MS.gene51584:CDS | 45.0% | |
| AATGCCATCTTCTTCCCAAC+TGG | + | chr1.4:7838236-7838255 | None:intergenic | 45.0% | |
| AGATATGGTGTACCACCACA+CGG | - | chr1.4:7841399-7841418 | MS.gene51584:CDS | 45.0% | |
| ATAACCAGAGCTCAGCAAGA+GGG | + | chr1.4:7841322-7841341 | None:intergenic | 45.0% | |
| ATCTCCTCACCTAAGCAACA+AGG | + | chr1.4:7841087-7841106 | None:intergenic | 45.0% | |
| ATCTGCGGACTCACTAAATC+AGG | + | chr1.4:7838311-7838330 | None:intergenic | 45.0% | |
| ATTCCAGCCGCTCCTATTAA+AGG | - | chr1.4:7838392-7838411 | MS.gene51584:intron | 45.0% | |
| CACAAGCTATTCGACCAGTT+GGG | - | chr1.4:7838219-7838238 | MS.gene51584:intron | 45.0% | |
| CAGCAATCAACTTAGGAGTG+TGG | + | chr1.4:7839193-7839212 | None:intergenic | 45.0% | |
| CATGTAAGGGAGACAAGTTC+CGG | + | chr1.4:7838841-7838860 | None:intergenic | 45.0% | |
| CGTGTAGTAATGCTCTTCTG+TGG | - | chr1.4:7841444-7841463 | MS.gene51584:CDS | 45.0% | |
| CTGCGGCTTACATATGAAGA+AGG | - | chr1.4:7839828-7839847 | MS.gene51584:intron | 45.0% | |
| GCACAGATGCCTATGAGTAA+AGG | + | chr1.4:7839369-7839388 | None:intergenic | 45.0% | |
| GTCTTTAGGCTGGACTACAA+AGG | - | chr1.4:7839236-7839255 | MS.gene51584:intron | 45.0% | |
| GTTGATTGCTGGATCTAGTG+AGG | - | chr1.4:7839202-7839221 | MS.gene51584:intron | 45.0% | |
| TAAGAAGGATCTCGAAGCTG+TGG | - | chr1.4:7839592-7839611 | MS.gene51584:intron | 45.0% | |
| TATAACCAGAGCTCAGCAAG+AGG | + | chr1.4:7841323-7841342 | None:intergenic | 45.0% | |
| TCATTACTCGCTGCAAGACA+AGG | + | chr1.4:7840597-7840616 | None:intergenic | 45.0% | |
| TGAGGCTCTCAATGATTCAC+TGG | - | chr1.4:7838166-7838185 | MS.gene51584:intron | 45.0% | |
| TGATTCACTGGAGAACAAGC+AGG | - | chr1.4:7838178-7838197 | MS.gene51584:intron | 45.0% | |
| TGATTTAGTGAGTCCGCAGA+TGG | - | chr1.4:7838310-7838329 | MS.gene51584:CDS | 45.0% | |
| TTCCAACTTGAGACTGGATG+TGG | + | chr1.4:7838984-7839003 | None:intergenic | 45.0% | |
| TTCCACATCCAGTCTCAAGT+TGG | - | chr1.4:7838979-7838998 | MS.gene51584:intron | 45.0% | |
| TTTAATAGGAGCGGCTGGAA+TGG | + | chr1.4:7838393-7838412 | None:intergenic | 45.0% | |
| ! | AACAAGCAGGTTCTAATCCG+TGG | - | chr1.4:7838191-7838210 | MS.gene51584:intron | 45.0% |
| ! | ACAAGCAGGTTCTAATCCGT+GGG | - | chr1.4:7838192-7838211 | MS.gene51584:intron | 45.0% |
| ! | ACACCTTTAGGGGTTCAAAC+GGG | + | chr1.4:7839628-7839647 | None:intergenic | 45.0% |
| ! | CAATCCTTGTTGCTTAGGTG+AGG | - | chr1.4:7841080-7841099 | MS.gene51584:CDS | 45.0% |
| ! | TGAGGCACCTTTAATAGGAG+CGG | + | chr1.4:7838402-7838421 | None:intergenic | 45.0% |
| !! | CACACTCCTAAGTTGATTGC+TGG | - | chr1.4:7839191-7839210 | MS.gene51584:intron | 45.0% |
| !! | GTGGAAGTTTAAGCACTGGT+AGG | - | chr1.4:7839997-7840016 | MS.gene51584:intron | 45.0% |
| !!! | CTTCGCCGTGTTTTTGAGAT+TGG | - | chr1.4:7839320-7839339 | MS.gene51584:intron | 45.0% |
| AATAGACTCACGGCTGAGAG+CGG | + | chr1.4:7838348-7838367 | None:intergenic | 50.0% | |
| AGAAAGGAAACTAGGCCAGC+TGG | - | chr1.4:7840677-7840696 | MS.gene51584:intron | 50.0% | |
| AGAGAGAGTCGATGTAGCAG+AGG | + | chr1.4:7838072-7838091 | None:intergenic | 50.0% | |
| AGGCATCTGTGCGAGTTTAC+AGG | - | chr1.4:7839377-7839396 | MS.gene51584:intron | 50.0% | |
| AGGGGTGGAAGTTTAAGCAC+TGG | - | chr1.4:7839993-7840012 | MS.gene51584:intron | 50.0% | |
| ATTGCTGGATCTAGTGAGGG+TGG | - | chr1.4:7839206-7839225 | MS.gene51584:intron | 50.0% | |
| CAAGAAGGAACTCGCAAAGC+TGG | - | chr1.4:7838010-7838029 | MS.gene51584:CDS | 50.0% | |
| CAGCTTTGCGAGTTCCTTCT+TGG | + | chr1.4:7838012-7838031 | None:intergenic | 50.0% | |
| CTGCGAACACCAGCAAATCA+AGG | - | chr1.4:7838952-7838971 | MS.gene51584:intron | 50.0% | |
| CTTTGCGAGTTCCTTCTTGG+AGG | + | chr1.4:7838009-7838028 | None:intergenic | 50.0% | |
| GAAGAACGTGCACAAGCTTG+CGG | - | chr1.4:7841147-7841166 | MS.gene51584:CDS | 50.0% | |
| GCACAAGCTATTCGACCAGT+TGG | - | chr1.4:7838218-7838237 | MS.gene51584:intron | 50.0% | |
| GCGGCAAATTTCACCATCTG+CGG | + | chr1.4:7838326-7838345 | None:intergenic | 50.0% | |
| GTACCCGTTTGAACCCCTAA+AGG | - | chr1.4:7839622-7839641 | MS.gene51584:CDS | 50.0% | |
| TAACCAGAGCTCAGCAAGAG+GGG | + | chr1.4:7841321-7841340 | None:intergenic | 50.0% | |
| TCGACCAGTTGGGAAGAAGA+TGG | - | chr1.4:7838229-7838248 | MS.gene51584:intron | 50.0% | |
| TGGTTTCACCGTACAGTGCT+TGG | - | chr1.4:7838274-7838293 | MS.gene51584:CDS | 50.0% | |
| TTGCGGTGTGATACGGTGTT+GGG | - | chr1.4:7839123-7839142 | MS.gene51584:intron | 50.0% | |
| TTTGCGGTGTGATACGGTGT+TGG | - | chr1.4:7839122-7839141 | MS.gene51584:intron | 50.0% | |
| ! | GACCCCCTTGCTGTCAATTA+TGG | - | chr1.4:7838101-7838120 | MS.gene51584:intron | 50.0% |
| ! | TGCCTGAACCAAGCACTGTA+CGG | + | chr1.4:7838285-7838304 | None:intergenic | 50.0% |
| ! | TTTTTCCACGTGACCCACTC+AGG | - | chr1.4:7841493-7841512 | MS.gene51584:CDS | 50.0% |
| !! | AAAGGTGCCTCACAACAGGT+TGG | - | chr1.4:7838410-7838429 | MS.gene51584:intron | 50.0% |
| !! | CTTGATTTGCTGGTGTTCGC+AGG | + | chr1.4:7838954-7838973 | None:intergenic | 50.0% |
| AGGGTGGAGCTGCTGTCTTT+AGG | - | chr1.4:7839222-7839241 | MS.gene51584:intron | 55.0% | |
| AGTCGATGTAGCAGAGGTGG+CGG | + | chr1.4:7838066-7838085 | None:intergenic | 55.0% | |
| CAAAGGGAAACCTGCATGCC+TGG | - | chr1.4:7839253-7839272 | MS.gene51584:intron | 55.0% | |
| CAACTTCGGTCCAGTCGTCA+GGG | + | chr1.4:7838148-7838167 | None:intergenic | 55.0% | |
| CACCGTACAGTGCTTGGTTC+AGG | - | chr1.4:7838280-7838299 | MS.gene51584:CDS | 55.0% | |
| GAAGTTGAGGTGACTGAGCC+AGG | + | chr1.4:7839274-7839293 | None:intergenic | 55.0% | |
| GAGAGTCGATGTAGCAGAGG+TGG | + | chr1.4:7838069-7838088 | None:intergenic | 55.0% | |
| GCACCTTTAATAGGAGCGGC+TGG | + | chr1.4:7838398-7838417 | None:intergenic | 55.0% | |
| GTCTTACAGCCAACGGGTAC+CGG | + | chr1.4:7840837-7840856 | None:intergenic | 55.0% | |
| TATCCTTCACCGGTACCCGT+TGG | - | chr1.4:7840825-7840844 | MS.gene51584:CDS | 55.0% | |
| TATGGTGTACCACCACACGG+TGG | - | chr1.4:7841402-7841421 | MS.gene51584:CDS | 55.0% | |
| TCAACTTCGGTCCAGTCGTC+AGG | + | chr1.4:7838149-7838168 | None:intergenic | 55.0% | |
| TCATTGAGCTCCCTGACGAC+TGG | - | chr1.4:7838135-7838154 | MS.gene51584:intron | 55.0% | |
| TCGTCAGGGAGCTCAATGAG+CGG | + | chr1.4:7838134-7838153 | None:intergenic | 55.0% | |
| TGACGACTGGACCGAAGTTG+AGG | - | chr1.4:7838148-7838167 | MS.gene51584:intron | 55.0% | |
| TGCACAAGCTTGCGGCATTG+AGG | - | chr1.4:7841155-7841174 | MS.gene51584:CDS | 55.0% | |
| TGGAGCTGCTGTCTTTAGGC+TGG | - | chr1.4:7839226-7839245 | MS.gene51584:intron | 55.0% | |
| ! | AGCAGGTTCTAATCCGTGGG+AGG | - | chr1.4:7838195-7838214 | MS.gene51584:intron | 55.0% |
| ! | GAATAGCTTGTGCCCTCCCA+CGG | + | chr1.4:7838211-7838230 | None:intergenic | 55.0% |
| ! | GCAGGTTCTAATCCGTGGGA+GGG | - | chr1.4:7838196-7838215 | MS.gene51584:intron | 55.0% |
| ! | GGTGTGATACGGTGTTGGGT+AGG | - | chr1.4:7839127-7839146 | MS.gene51584:intron | 55.0% |
| ACTCCAAAGCCACCGTGTGG+TGG | + | chr1.4:7841414-7841433 | None:intergenic | 60.0% | |
| CCTACTCCAAAGCCACCGTG+TGG | + | chr1.4:7841417-7841436 | None:intergenic | 60.0% | |
| CGTCAGGGAGCTCAATGAGC+GGG | + | chr1.4:7838133-7838152 | None:intergenic | 60.0% | |
| GCAATCCTGAGTGGGTCACG+TGG | + | chr1.4:7841501-7841520 | None:intergenic | 60.0% | |
| GTACCACCACACGGTGGCTT+TGG | - | chr1.4:7841408-7841427 | MS.gene51584:CDS | 60.0% | |
| !! | CCACACGGTGGCTTTGGAGT+AGG | - | chr1.4:7841414-7841433 | MS.gene51584:CDS | 60.0% |
| !! | CGGTGGCTTTGGAGTAGGCT+TGG | - | chr1.4:7841419-7841438 | MS.gene51584:CDS | 60.0% |
| AGACTCACGGCTGAGAGCGG+CGG | + | chr1.4:7838345-7838364 | None:intergenic | 65.0% | |
| CTGCCCCTCTTGCTGAGCTC+TGG | - | chr1.4:7841315-7841334 | MS.gene51584:CDS | 65.0% | |
| GGTGACTGAGCCAGGCATGC+AGG | + | chr1.4:7839266-7839285 | None:intergenic | 65.0% | |
| ! | AGGTGGCGGCGGCAACTTCT+CGG | + | chr1.4:7838052-7838071 | None:intergenic | 65.0% |
| ! | CGATGTAGCAGAGGTGGCGG+CGG | + | chr1.4:7838063-7838082 | None:intergenic | 65.0% |
| !! | CAGCCAACGGGTACCGGTGA+AGG | + | chr1.4:7840831-7840850 | None:intergenic | 65.0% |
| TGGCGGCGGCAACTTCTCGG+CGG | + | chr1.4:7838049-7838068 | None:intergenic | 70.0% | |
| CGGCGGCAACTTCTCGGCGG+CGG | + | chr1.4:7838046-7838065 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 7837948 | 7841527 | 7837948 | ID=MS.gene51584 |
| chr1.4 | mRNA | 7837948 | 7841527 | 7837948 | ID=MS.gene51584.t1;Parent=MS.gene51584 |
| chr1.4 | exon | 7841048 | 7841527 | 7841048 | ID=MS.gene51584.t1.exon1;Parent=MS.gene51584.t1 |
| chr1.4 | CDS | 7841048 | 7841527 | 7841048 | ID=cds.MS.gene51584.t1;Parent=MS.gene51584.t1 |
| chr1.4 | exon | 7840802 | 7840912 | 7840802 | ID=MS.gene51584.t1.exon2;Parent=MS.gene51584.t1 |
| chr1.4 | CDS | 7840802 | 7840912 | 7840802 | ID=cds.MS.gene51584.t1;Parent=MS.gene51584.t1 |
| chr1.4 | exon | 7840470 | 7840583 | 7840470 | ID=MS.gene51584.t1.exon3;Parent=MS.gene51584.t1 |
| chr1.4 | CDS | 7840470 | 7840583 | 7840470 | ID=cds.MS.gene51584.t1;Parent=MS.gene51584.t1 |
| chr1.4 | exon | 7840036 | 7840326 | 7840036 | ID=MS.gene51584.t1.exon4;Parent=MS.gene51584.t1 |
| chr1.4 | CDS | 7840036 | 7840326 | 7840036 | ID=cds.MS.gene51584.t1;Parent=MS.gene51584.t1 |
| chr1.4 | exon | 7839832 | 7839942 | 7839832 | ID=MS.gene51584.t1.exon5;Parent=MS.gene51584.t1 |
| chr1.4 | CDS | 7839832 | 7839942 | 7839832 | ID=cds.MS.gene51584.t1;Parent=MS.gene51584.t1 |
| chr1.4 | exon | 7839609 | 7839662 | 7839609 | ID=MS.gene51584.t1.exon6;Parent=MS.gene51584.t1 |
| chr1.4 | CDS | 7839609 | 7839662 | 7839609 | ID=cds.MS.gene51584.t1;Parent=MS.gene51584.t1 |
| chr1.4 | exon | 7838766 | 7838845 | 7838766 | ID=MS.gene51584.t1.exon7;Parent=MS.gene51584.t1 |
| chr1.4 | CDS | 7838766 | 7838845 | 7838766 | ID=cds.MS.gene51584.t1;Parent=MS.gene51584.t1 |
| chr1.4 | exon | 7838553 | 7838668 | 7838553 | ID=MS.gene51584.t1.exon8;Parent=MS.gene51584.t1 |
| chr1.4 | CDS | 7838553 | 7838668 | 7838553 | ID=cds.MS.gene51584.t1;Parent=MS.gene51584.t1 |
| chr1.4 | exon | 7838264 | 7838378 | 7838264 | ID=MS.gene51584.t1.exon9;Parent=MS.gene51584.t1 |
| chr1.4 | CDS | 7838264 | 7838378 | 7838264 | ID=cds.MS.gene51584.t1;Parent=MS.gene51584.t1 |
| chr1.4 | exon | 7837948 | 7838074 | 7837948 | ID=MS.gene51584.t1.exon10;Parent=MS.gene51584.t1 |
| chr1.4 | CDS | 7837948 | 7838074 | 7837948 | ID=cds.MS.gene51584.t1;Parent=MS.gene51584.t1 |
| Gene Sequence |
| Protein sequence |
