Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000635.t1 | AES95696.1 | 84.5 | 543 | 65 | 3 | 1 | 539 | 62 | 589 | 5.70E-256 | 893.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000635.t1 | Q9M084 | 64.3 | 498 | 168 | 2 | 52 | 539 | 61 | 558 | 1.1e-183 | 644.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000635.t1 | G7KAW8 | 84.5 | 543 | 65 | 3 | 1 | 539 | 62 | 589 | 4.1e-256 | 893.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000635.t1 | MTR_5g028360 | 88.214 | 543 | 45 | 3 | 1 | 539 | 62 | 589 | 0.0 | 971 |
| MS.gene000635.t1 | MTR_1g014140 | 73.937 | 541 | 139 | 1 | 1 | 539 | 1 | 541 | 0.0 | 815 |
| MS.gene000635.t1 | MTR_4g100920 | 25.049 | 511 | 303 | 18 | 65 | 534 | 70 | 541 | 9.19e-33 | 132 |
| MS.gene000635.t1 | MTR_8g102050 | 30.605 | 281 | 175 | 8 | 269 | 536 | 275 | 548 | 4.46e-27 | 115 |
| MS.gene000635.t1 | MTR_7g101050 | 31.970 | 269 | 163 | 10 | 282 | 536 | 311 | 573 | 4.04e-26 | 112 |
| MS.gene000635.t1 | MTR_2g036600 | 22.474 | 485 | 315 | 18 | 91 | 531 | 121 | 588 | 4.22e-14 | 75.5 |
| MS.gene000635.t1 | MTR_4g127790 | 23.184 | 358 | 237 | 13 | 207 | 530 | 32 | 385 | 9.49e-12 | 67.4 |
| MS.gene000635.t1 | MTR_4g052070 | 26.172 | 256 | 166 | 8 | 83 | 331 | 65 | 304 | 2.77e-11 | 66.6 |
| MS.gene000635.t1 | MTR_8g104740 | 27.857 | 280 | 173 | 12 | 61 | 331 | 57 | 316 | 5.37e-11 | 65.9 |
| MS.gene000635.t1 | MTR_8g104740 | 27.857 | 280 | 173 | 12 | 61 | 331 | 57 | 316 | 8.27e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000635.t1 | AT4G31180 | 63.056 | 517 | 181 | 2 | 33 | 539 | 42 | 558 | 0.0 | 676 |
| MS.gene000635.t1 | AT4G31180 | 63.056 | 517 | 181 | 2 | 33 | 539 | 42 | 558 | 0.0 | 676 |
| MS.gene000635.t1 | AT4G26870 | 61.822 | 516 | 191 | 4 | 25 | 539 | 22 | 532 | 0.0 | 647 |
| MS.gene000635.t1 | AT4G17300 | 25.255 | 491 | 291 | 15 | 86 | 534 | 126 | 582 | 1.87e-30 | 125 |
| MS.gene000635.t1 | AT4G17300 | 25.255 | 491 | 291 | 15 | 86 | 534 | 106 | 562 | 1.90e-30 | 125 |
| MS.gene000635.t1 | AT5G56680 | 29.603 | 277 | 175 | 8 | 273 | 536 | 300 | 569 | 6.64e-28 | 118 |
| MS.gene000635.t1 | AT1G70980 | 29.710 | 276 | 172 | 8 | 276 | 536 | 300 | 568 | 1.25e-25 | 111 |
| MS.gene000635.t1 | AT3G07420 | 23.792 | 269 | 191 | 8 | 273 | 532 | 368 | 631 | 1.55e-11 | 67.4 |
Find 121 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGATACTTCTTACATTTC+TGG | 0.087614 | 5.1:-19259746 | None:intergenic |
| CTTATTACATTGATGCTTTC+AGG | 0.115749 | 5.1:+19261156 | MS.gene000635:CDS |
| CACACTCCAAAGTTGATTAA+TGG | 0.180357 | 5.1:+19259355 | MS.gene000635:CDS |
| TTCTAGAAGCATCCTCTATT+TGG | 0.181059 | 5.1:-19258741 | None:intergenic |
| GCACGTTCTTCTAACAATTT+TGG | 0.230009 | 5.1:-19261101 | None:intergenic |
| GACCCCTTAGCCACCAATTA+TGG | 0.254007 | 5.1:+19258214 | MS.gene000635:CDS |
| ATTCCGGCTACTCCTATTAA+AGG | 0.274375 | 5.1:+19258526 | MS.gene000635:CDS |
| TATTTCCACGTGACCCAAAA+AGG | 0.306266 | 5.1:+19261417 | MS.gene000635:CDS |
| TAATGGGATGTTGCCATAAT+TGG | 0.313034 | 5.1:-19258227 | None:intergenic |
| AGGCATCTGTGTGAGTTTAC+TGG | 0.353312 | 5.1:+19259541 | MS.gene000635:CDS |
| TTAGGTGAGGAGATAATTTC+AGG | 0.358661 | 5.1:+19261059 | MS.gene000635:intron |
| AAGTGCTTTGACCTGGGTCC+GGG | 0.362290 | 5.1:-19258287 | None:intergenic |
| TTGGATTGGAGCTCCTCTAA+TGG | 0.364039 | 5.1:-19258244 | None:intergenic |
| TGCTGAGTGGTGCCTTTAAT+AGG | 0.368885 | 5.1:-19258538 | None:intergenic |
| CAAGTGCTTTGACCTGGGTC+CGG | 0.371135 | 5.1:-19258288 | None:intergenic |
| CGGAAAATTCCTTGATTAGC+TGG | 0.377962 | 5.1:-19259071 | None:intergenic |
| GACGGGATGGACCGGTGTCT+TGG | 0.378797 | 5.1:-19258263 | None:intergenic |
| TGGTGGCTTTGGCGCAGGCT+TGG | 0.380508 | 5.1:+19261343 | MS.gene000635:CDS |
| TCATGGCGTTGTTTCCATTC+CGG | 0.380729 | 5.1:+19258510 | MS.gene000635:CDS |
| ATCTGCTCACTCACTGAATC+AGG | 0.382002 | 5.1:-19258442 | None:intergenic |
| ACCGATACCCTTTGGCCATA+AGG | 0.383226 | 5.1:+19260792 | MS.gene000635:CDS |
| GCACCACTGCATGGTGGCTT+TGG | 0.390476 | 5.1:+19261332 | MS.gene000635:CDS |
| CTAGATCCATTAATCAACTT+TGG | 0.392041 | 5.1:-19259361 | None:intergenic |
| CTCTATTTGGAAGGGTAAAA+CGG | 0.398471 | 5.1:-19258728 | None:intergenic |
| TGGTGCAGGCTCTTTGCACT+CGG | 0.398760 | 5.1:-19258071 | None:intergenic |
| CAAAGGGCATCCTGCATGCC+TGG | 0.401678 | 5.1:+19259417 | MS.gene000635:CDS |
| CTGCATGGTGGCTTTGGCGC+AGG | 0.403327 | 5.1:+19261338 | MS.gene000635:CDS |
| GAGTCTGTGGTGGACGTTCA+TGG | 0.408170 | 5.1:+19258493 | MS.gene000635:CDS |
| ACAACTTGTTCGTGTGAATC+AGG | 0.411639 | 5.1:+19259010 | MS.gene000635:CDS |
| AGCATCAATGTAATAAGATA+TGG | 0.416066 | 5.1:-19261150 | None:intergenic |
| TATCCTTCACCGATACCCTT+TGG | 0.424104 | 5.1:+19260784 | MS.gene000635:CDS |
| TTATGGCAACATCCCATTAG+AGG | 0.429972 | 5.1:+19258231 | MS.gene000635:CDS |
| TGGATTGGAGCTCCTCTAAT+GGG | 0.435677 | 5.1:-19258243 | None:intergenic |
| CGGCCATTTGTTGCCGATGT+CGG | 0.439008 | 5.1:-19258156 | None:intergenic |
| CATTGTATAGAACGGCCTTA+TGG | 0.447659 | 5.1:-19260807 | None:intergenic |
| GACGATGATGGTGCTGGTGC+AGG | 0.454321 | 5.1:-19258085 | None:intergenic |
| GGAGTAGAAATTGAGCCTTT+TGG | 0.454350 | 5.1:+19260599 | MS.gene000635:CDS |
| TGAATATGACAGGGCCAGTC+AGG | 0.454741 | 5.1:+19258771 | MS.gene000635:CDS |
| TCTATTTGGAAGGGTAAAAC+GGG | 0.465770 | 5.1:-19258727 | None:intergenic |
| GATGGACCGGTGTCTTGGAT+TGG | 0.465944 | 5.1:-19258258 | None:intergenic |
| GTGAATTGAAATGAAGTCTT+CGG | 0.483974 | 5.1:-19259335 | None:intergenic |
| TATTAAAGGCACCACTCAGC+AGG | 0.490348 | 5.1:+19258540 | MS.gene000635:CDS |
| CTAAATTGTATTGTGTGAGT+AGG | 0.490707 | 5.1:+19258698 | MS.gene000635:CDS |
| AGTGCTTTGACCTGGGTCCG+GGG | 0.493434 | 5.1:-19258286 | None:intergenic |
| GCTCCGACATCGGCAACAAA+TGG | 0.503015 | 5.1:+19258153 | MS.gene000635:CDS |
| GTACCCATTCGAACCGCTAA+AGG | 0.503139 | 5.1:+19259785 | MS.gene000635:CDS |
| TTGCCATAATTGGTGGCTAA+GGG | 0.506950 | 5.1:-19258217 | None:intergenic |
| AATAATTCAGTTAGAATTCG+AGG | 0.508512 | 5.1:+19258325 | MS.gene000635:CDS |
| ATGTCGGAGCTTTACCAGCT+TGG | 0.509633 | 5.1:-19258140 | None:intergenic |
| TACACCTTTAGCGGTTCGAA+TGG | 0.512382 | 5.1:-19259789 | None:intergenic |
| ACCTCAACTTCACAAGCAAA+TGG | 0.513847 | 5.1:+19259447 | MS.gene000635:CDS |
| GAAGTGAAGCTGAATATGAC+AGG | 0.516656 | 5.1:+19258761 | MS.gene000635:CDS |
| AATCGTCAAGTGCTTTGACC+TGG | 0.518195 | 5.1:-19258294 | None:intergenic |
| GCGCCAAAGCCACCATGCAG+TGG | 0.521064 | 5.1:-19261335 | None:intergenic |
| GATTGACTGCCACTATTTCG+AGG | 0.521814 | 5.1:+19259582 | MS.gene000635:CDS |
| ATCGTCAAGTGCTTTGACCT+GGG | 0.521979 | 5.1:-19258293 | None:intergenic |
| CTTCAACATTATCCGCAATA+CGG | 0.524897 | 5.1:-19259091 | None:intergenic |
| CACCGGTCCATCCCGTCCCC+CGG | 0.527914 | 5.1:+19258269 | MS.gene000635:CDS |
| ACACCTTTAGCGGTTCGAAT+GGG | 0.531138 | 5.1:-19259788 | None:intergenic |
| TCGGAGCTTTACCAGCTTGG+CGG | 0.531299 | 5.1:-19258137 | None:intergenic |
| TTGCAAACACCAGCTAATCA+AGG | 0.532269 | 5.1:+19259062 | MS.gene000635:CDS |
| AACGCCATCTTCTTACTCAC+TGG | 0.532690 | 5.1:-19258367 | None:intergenic |
| GCCTTATGGCCAAAGGGTAT+CGG | 0.533082 | 5.1:-19260793 | None:intergenic |
| TCAGTATTCAAGTCACCAAA+AGG | 0.536741 | 5.1:-19260614 | None:intergenic |
| GTTGCCATAATTGGTGGCTA+AGG | 0.537422 | 5.1:-19258218 | None:intergenic |
| GAAGTTGAGGTGACTGAGCC+AGG | 0.538658 | 5.1:-19259435 | None:intergenic |
| ACAGATATACCTCGAAATAG+TGG | 0.539941 | 5.1:-19259591 | None:intergenic |
| CAGAGGATTCCTTTACTCAC+AGG | 0.542220 | 5.1:+19259521 | MS.gene000635:CDS |
| GGTGCAGGCTCTTTGCACTC+GGG | 0.544258 | 5.1:-19258070 | None:intergenic |
| ACACAGATGCCTGTGAGTAA+AGG | 0.545161 | 5.1:-19259530 | None:intergenic |
| GCCATTTGCTTGTGAAGTTG+AGG | 0.546111 | 5.1:-19259448 | None:intergenic |
| AGAAGCATCCTCTATTTGGA+AGG | 0.546640 | 5.1:-19258737 | None:intergenic |
| TAAATTGTATTGTGTGAGTA+GGG | 0.550079 | 5.1:+19258699 | MS.gene000635:CDS |
| CTGCGGCTTACATACGAAGA+AGG | 0.554330 | 5.1:+19260046 | MS.gene000635:CDS |
| CAAAGCACTTGACGATTCAC+TGG | 0.554919 | 5.1:+19258300 | MS.gene000635:CDS |
| AGCTCTCAGCCGTGAGTCTG+TGG | 0.557460 | 5.1:+19258480 | MS.gene000635:CDS |
| TGGCCAAAGGGTATCGGTGA+AGG | 0.560167 | 5.1:-19260787 | None:intergenic |
| GGTGACTGAGCCAGGCATGC+AGG | 0.560588 | 5.1:-19259427 | None:intergenic |
| TTTAATAGGAGTAGCCGGAA+TGG | 0.564133 | 5.1:-19258524 | None:intergenic |
| ATTGTTAGAAGAACGTGCAC+AGG | 0.565590 | 5.1:+19261106 | MS.gene000635:CDS |
| AGCTGGTAAAGCTCCGACAT+CGG | 0.569312 | 5.1:+19258143 | MS.gene000635:CDS |
| ACTGAAGCTGAAAGGAAACT+AGG | 0.576789 | 5.1:+19260632 | MS.gene000635:CDS |
| GTCGGTGCAATGTACCTGAC+TGG | 0.577872 | 5.1:-19258785 | None:intergenic |
| CACAAGCAAATGGCAATATG+TGG | 0.581777 | 5.1:+19259457 | MS.gene000635:CDS |
| TCTGATGATTCCGACGATGA+TGG | 0.583276 | 5.1:-19258097 | None:intergenic |
| GTGCCTTTAATAGGAGTAGC+CGG | 0.584656 | 5.1:-19258529 | None:intergenic |
| GTTGATTAATGGATCTAGTG+AGG | 0.586296 | 5.1:+19259366 | MS.gene000635:CDS |
| GTGCTTTGACCTGGGTCCGG+GGG | 0.586355 | 5.1:-19258285 | None:intergenic |
| GACAGAGGTAGTAGCAGCGG+CGG | 0.587288 | 5.1:-19258176 | None:intergenic |
| GATTCCGACGATGATGGTGC+TGG | 0.590858 | 5.1:-19258091 | None:intergenic |
| AGAACGGCCTTATGGCCAAA+GGG | 0.597615 | 5.1:-19260799 | None:intergenic |
| GAGCAAGGCATTGTATAGAA+CGG | 0.599279 | 5.1:-19260815 | None:intergenic |
| TGTTGAAACTGTACAGTGCT+TGG | 0.600109 | 5.1:+19258408 | MS.gene000635:CDS |
| TCGTTTGACGTCTTTATCCG+TGG | 0.600195 | 5.1:+19260860 | MS.gene000635:CDS |
| ACTTGAATACTGAAGCTGAA+AGG | 0.602852 | 5.1:+19260624 | MS.gene000635:CDS |
| AGAGACAGAGGTAGTAGCAG+CGG | 0.604458 | 5.1:-19258179 | None:intergenic |
| ACGACCAGTGAGTAAGAAGA+TGG | 0.608825 | 5.1:+19258363 | MS.gene000635:CDS |
| TGGGATGTTGCCATAATTGG+TGG | 0.610485 | 5.1:-19258224 | None:intergenic |
| TGCTGAGAGATTAGAGACAG+AGG | 0.613637 | 5.1:-19258191 | None:intergenic |
| ATAATTCAGTTAGAATTCGA+GGG | 0.614687 | 5.1:+19258326 | MS.gene000635:CDS |
| ATTAATGGATCTAGTGAGGG+TGG | 0.615216 | 5.1:+19259370 | MS.gene000635:CDS |
| TGCACCAGCACCATCATCGT+CGG | 0.615748 | 5.1:+19258087 | MS.gene000635:CDS |
| TAGAACGGCCTTATGGCCAA+AGG | 0.615833 | 5.1:-19260800 | None:intergenic |
| TTGATTAATGGATCTAGTGA+GGG | 0.619081 | 5.1:+19259367 | MS.gene000635:CDS |
| AGATATGGTGCACCACTGCA+TGG | 0.619194 | 5.1:+19261323 | MS.gene000635:intron |
| TAAGCCGCAGAGTATTTCGC+AGG | 0.624017 | 5.1:-19260033 | None:intergenic |
| GAAGCATCCTCTATTTGGAA+GGG | 0.624822 | 5.1:-19258736 | None:intergenic |
| TGCCATAATTGGTGGCTAAG+GGG | 0.625961 | 5.1:-19258216 | None:intergenic |
| TCTCAGCCGTGAGTCTGTGG+TGG | 0.626818 | 5.1:+19258483 | MS.gene000635:CDS |
| CTGGTCTTGATGCTGAAATG+CGG | 0.628437 | 5.1:+19259560 | MS.gene000635:CDS |
| GAACGTCCACCACAGACTCA+CGG | 0.631311 | 5.1:-19258489 | None:intergenic |
| AGAAGGTATTGAGATGCTCA+AGG | 0.631343 | 5.1:+19260063 | MS.gene000635:CDS |
| CGGGGCTGTGTATAGAGCAG+AGG | 0.634042 | 5.1:+19259504 | MS.gene000635:CDS |
| CGTGTTGTAATGCTCTTCTG+TGG | 0.634961 | 5.1:+19261368 | MS.gene000635:CDS |
| TGATTCAGTGAGTGAGCAGA+TGG | 0.646610 | 5.1:+19258444 | MS.gene000635:CDS |
| AGAAGTATCTTGAAGCTGTG+AGG | 0.665661 | 5.1:+19259757 | MS.gene000635:CDS |
| GGAGCTCCAATCCAAGACAC+CGG | 0.683365 | 5.1:+19258252 | MS.gene000635:CDS |
| AAGTGAAGCTGAATATGACA+GGG | 0.700528 | 5.1:+19258762 | MS.gene000635:CDS |
| ATGTCATGCGAATATTATCG+AGG | 0.703735 | 5.1:-19261391 | None:intergenic |
| TATGGTGCACCACTGCATGG+TGG | 0.757084 | 5.1:+19261326 | MS.gene000635:CDS |
| AGTACCTGCGAAATACTCTG+CGG | 0.773213 | 5.1:+19260029 | MS.gene000635:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAGTAGTAAAATATTAA+GGG | - | chr5.1:19260682-19260701 | None:intergenic | 10.0% |
| !! | TATTTAGTAGTAAAATATTA+AGG | - | chr5.1:19260683-19260702 | None:intergenic | 10.0% |
| !!! | TACTTTTTTTTTTGTATTAT+AGG | + | chr5.1:19259810-19259829 | MS.gene000635:intron | 10.0% |
| !!! | AGGTTTTTATTAGTTTTTTA+GGG | + | chr5.1:19258560-19258579 | MS.gene000635:intron | 15.0% |
| !!! | ATAACTTTTGATTGTATTTT+CGG | + | chr5.1:19259286-19259305 | MS.gene000635:intron | 15.0% |
| !!! | ATCAATTAAAATTGACATTT+TGG | + | chr5.1:19260279-19260298 | MS.gene000635:intron | 15.0% |
| !!! | ATGATTTGTCTTATTTTATT+TGG | + | chr5.1:19259670-19259689 | MS.gene000635:intron | 15.0% |
| !!! | ATTACTTTTCTAAAACTAAT+TGG | - | chr5.1:19260658-19260677 | None:intergenic | 15.0% |
| !!! | TTATTGTTGTTATTATTTTC+TGG | + | chr5.1:19261260-19261279 | MS.gene000635:intron | 15.0% |
| !!! | TTTTTAAACTGAATTACAAA+GGG | + | chr5.1:19259401-19259420 | MS.gene000635:CDS | 15.0% |
| !! | AAATAATAACAACAATAACC+AGG | - | chr5.1:19261258-19261277 | None:intergenic | 20.0% |
| !! | AATAATAACAACAATAACCA+GGG | - | chr5.1:19261257-19261276 | None:intergenic | 20.0% |
| !! | TATAAGATTAAAATGTTCAC+AGG | - | chr5.1:19260241-19260260 | None:intergenic | 20.0% |
| !! | TGGATTTCAATTCTATTTAT+AGG | + | chr5.1:19260744-19260763 | MS.gene000635:intron | 20.0% |
| !!! | ATGTCAATGTTTTTTTGTAA+TGG | + | chr5.1:19258973-19258992 | MS.gene000635:intron | 20.0% |
| !!! | CAGGTTTTTATTAGTTTTTT+AGG | + | chr5.1:19258559-19258578 | MS.gene000635:intron | 20.0% |
| !!! | CTATTATGTAAAACTGATTT+TGG | + | chr5.1:19260724-19260743 | MS.gene000635:intron | 20.0% |
| !!! | GTCATGTTTAATATATTTTC+TGG | + | chr5.1:19259194-19259213 | MS.gene000635:intron | 20.0% |
| !!! | GTGTTATGAAAATTTGATTT+TGG | + | chr5.1:19258597-19258616 | MS.gene000635:intron | 20.0% |
| !!! | GTTTTTAAACTGAATTACAA+AGG | + | chr5.1:19259400-19259419 | MS.gene000635:CDS | 20.0% |
| !!! | TAACTTTTGATTGTATTTTC+GGG | + | chr5.1:19259287-19259306 | MS.gene000635:intron | 20.0% |
| !!! | TGTTTTAACTATGATCTAAT+TGG | + | chr5.1:19260514-19260533 | MS.gene000635:intron | 20.0% |
| !!! | TTATTTTATTTGGCAGATTA+TGG | + | chr5.1:19259680-19259699 | MS.gene000635:intron | 20.0% |
| ! | AAACATTGACATTCACATAA+AGG | - | chr5.1:19258965-19258984 | None:intergenic | 25.0% |
| ! | AAATTAAGACTAGAAGACTT+CGG | - | chr5.1:19260430-19260449 | None:intergenic | 25.0% |
| ! | AATAATTCAGTTAGAATTCG+AGG | + | chr5.1:19258325-19258344 | MS.gene000635:CDS | 25.0% |
| ! | AGCATCAATGTAATAAGATA+TGG | - | chr5.1:19261153-19261172 | None:intergenic | 25.0% |
| ! | ATAATTCAGTTAGAATTCGA+GGG | + | chr5.1:19258326-19258345 | MS.gene000635:CDS | 25.0% |
| ! | CAAACTCATCAAAATAACAT+TGG | - | chr5.1:19259147-19259166 | None:intergenic | 25.0% |
| ! | TAAACTATTCAACTTGTAAG+TGG | + | chr5.1:19260101-19260120 | MS.gene000635:intron | 25.0% |
| ! | TAAATTGTATTGTGTGAGTA+GGG | + | chr5.1:19258699-19258718 | MS.gene000635:CDS | 25.0% |
| ! | TCAAATCAAACAACAATAAC+AGG | - | chr5.1:19261017-19261036 | None:intergenic | 25.0% |
| !! | AAAAAAAAGTACACCTTTAG+CGG | - | chr5.1:19259801-19259820 | None:intergenic | 25.0% |
| !! | TATTAATGATTTTGCTTTGC+AGG | + | chr5.1:19260571-19260590 | MS.gene000635:intron | 25.0% |
| !!! | ACGTTTGTTGTATATAGATT+CGG | + | chr5.1:19258891-19258910 | MS.gene000635:intron | 25.0% |
| !!! | CTAGTCTTAATTTTCTCTTA+TGG | + | chr5.1:19260437-19260456 | MS.gene000635:intron | 25.0% |
| !!! | GTGGTTTTAAATTATTGATC+TGG | - | chr5.1:19258847-19258866 | None:intergenic | 25.0% |
| AACACAAATCTTAATCAGTG+TGG | - | chr5.1:19258866-19258885 | None:intergenic | 30.0% | |
| ACAGGAAACTTGAGATTTAA+TGG | - | chr5.1:19260999-19261018 | None:intergenic | 30.0% | |
| AGACAAATCATCAGTAAATC+AGG | - | chr5.1:19259661-19259680 | None:intergenic | 30.0% | |
| CAAGATACTTCTTACATTTC+TGG | - | chr5.1:19259749-19259768 | None:intergenic | 30.0% | |
| CGTGATAAAAGAAAGACTAA+AGG | - | chr5.1:19260164-19260183 | None:intergenic | 30.0% | |
| CTAAATTGTATTGTGTGAGT+AGG | + | chr5.1:19258698-19258717 | MS.gene000635:CDS | 30.0% | |
| CTAGATCCATTAATCAACTT+TGG | - | chr5.1:19259364-19259383 | None:intergenic | 30.0% | |
| CTTATTACATTGATGCTTTC+AGG | + | chr5.1:19261156-19261175 | MS.gene000635:CDS | 30.0% | |
| GTGAATTGAAATGAAGTCTT+CGG | - | chr5.1:19259338-19259357 | None:intergenic | 30.0% | |
| TCATAGTTGATCTTATGTAG+TGG | + | chr5.1:19259852-19259871 | MS.gene000635:intron | 30.0% | |
| TTAACTATGATCTAATTGGC+TGG | + | chr5.1:19260518-19260537 | MS.gene000635:intron | 30.0% | |
| TTTCTCTTATGGATAGTTCT+AGG | + | chr5.1:19260448-19260467 | MS.gene000635:intron | 30.0% | |
| ! | TGTGTGGTTTTCTTCATTAT+AGG | + | chr5.1:19258660-19258679 | MS.gene000635:intron | 30.0% |
| ! | TTGATTAATGGATCTAGTGA+GGG | + | chr5.1:19259367-19259386 | MS.gene000635:CDS | 30.0% |
| !! | AATGGAAGTGCTAATACATT+TGG | - | chr5.1:19260981-19261000 | None:intergenic | 30.0% |
| !! | CTATATATTTGTTGTCGCTT+AGG | + | chr5.1:19261041-19261060 | MS.gene000635:intron | 30.0% |
| !! | TGATTTTAACCGTGTTTTTG+AGG | + | chr5.1:19259480-19259499 | MS.gene000635:CDS | 30.0% |
| !!! | TGTTTTTTTGTAATGGATGC+AGG | + | chr5.1:19258980-19258999 | MS.gene000635:intron | 30.0% |
| AAACCAACTGGAAATTGGTT+AGG | + | chr5.1:19260362-19260381 | MS.gene000635:intron | 35.0% | |
| AAGTGAAGCTGAATATGACA+GGG | + | chr5.1:19258762-19258781 | MS.gene000635:CDS | 35.0% | |
| AATGTGTGATCTTCCAGATA+TGG | + | chr5.1:19261308-19261327 | MS.gene000635:intron | 35.0% | |
| ACAGATATACCTCGAAATAG+TGG | - | chr5.1:19259594-19259613 | None:intergenic | 35.0% | |
| ACTAATAAAAACCTGCTGAG+TGG | - | chr5.1:19258554-19258573 | None:intergenic | 35.0% | |
| ACTTGAATACTGAAGCTGAA+AGG | + | chr5.1:19260624-19260643 | MS.gene000635:CDS | 35.0% | |
| AGTAGAGACATCCTAAACAT+AGG | - | chr5.1:19261228-19261247 | None:intergenic | 35.0% | |
| AGTGTGAGTTGCATTGTTTA+GGG | + | chr5.1:19258620-19258639 | MS.gene000635:intron | 35.0% | |
| ATGTCATGCGAATATTATCG+AGG | - | chr5.1:19261394-19261413 | None:intergenic | 35.0% | |
| CTCTATTTGGAAGGGTAAAA+CGG | - | chr5.1:19258731-19258750 | None:intergenic | 35.0% | |
| CTTCAACATTATCCGCAATA+CGG | - | chr5.1:19259094-19259113 | None:intergenic | 35.0% | |
| GTCTCCAGAAAACATTTCAT+CGG | + | chr5.1:19260337-19260356 | MS.gene000635:intron | 35.0% | |
| TAATGGGATGTTGCCATAAT+TGG | - | chr5.1:19258230-19258249 | None:intergenic | 35.0% | |
| TATGATGGTATTGTGTTGTG+TGG | + | chr5.1:19258644-19258663 | MS.gene000635:intron | 35.0% | |
| TCAGTATTCAAGTCACCAAA+AGG | - | chr5.1:19260617-19260636 | None:intergenic | 35.0% | |
| TCTATTTGGAAGGGTAAAAC+GGG | - | chr5.1:19258730-19258749 | None:intergenic | 35.0% | |
| TTAGGTGAGGAGATAATTTC+AGG | + | chr5.1:19261059-19261078 | MS.gene000635:intron | 35.0% | |
| ! | ATACATTTGGAGAAGCATGA+CGG | - | chr5.1:19260968-19260987 | None:intergenic | 35.0% |
| ! | CACACTCCAAAGTTGATTAA+TGG | + | chr5.1:19259355-19259374 | MS.gene000635:CDS | 35.0% |
| ! | CAGTTTCAACATTTTCTCTG+AGG | - | chr5.1:19258399-19258418 | None:intergenic | 35.0% |
| ! | CTTGTTGTATCTTCTTACCA+CGG | - | chr5.1:19260880-19260899 | None:intergenic | 35.0% |
| ! | GCACGTTCTTCTAACAATTT+TGG | - | chr5.1:19261104-19261123 | None:intergenic | 35.0% |
| ! | GTGGTTTTCTTCATTATAGG+TGG | + | chr5.1:19258663-19258682 | MS.gene000635:intron | 35.0% |
| ! | GTTGATTAATGGATCTAGTG+AGG | + | chr5.1:19259366-19259385 | MS.gene000635:CDS | 35.0% |
| ! | TCAAGGAATTTTCCGTATTG+CGG | + | chr5.1:19259079-19259098 | MS.gene000635:CDS | 35.0% |
| ! | TGCATTGTTTAGGGTTATGA+TGG | + | chr5.1:19258629-19258648 | MS.gene000635:intron | 35.0% |
| ! | TGTCGCTTATACCTATGTTT+AGG | + | chr5.1:19261214-19261233 | MS.gene000635:intron | 35.0% |
| ! | TGTGTGTTTGAAATCGTTGA+GGG | + | chr5.1:19259629-19259648 | MS.gene000635:intron | 35.0% |
| ! | TTGTGTGTTTGAAATCGTTG+AGG | + | chr5.1:19259628-19259647 | MS.gene000635:intron | 35.0% |
| ! | TTTGCCGATGAAATGTTTTC+TGG | - | chr5.1:19260344-19260363 | None:intergenic | 35.0% |
| !! | TTCTAGAAGCATCCTCTATT+TGG | - | chr5.1:19258744-19258763 | None:intergenic | 35.0% |
| !! | TTTTGATTGTATTTTCGGGC+AGG | + | chr5.1:19259291-19259310 | MS.gene000635:intron | 35.0% |
| !!! | TAGTTTTGATCATCAGAGCA+AGG | - | chr5.1:19260833-19260852 | None:intergenic | 35.0% |
| !!! | TTTAACCGTGTTTTTGAGGT+CGG | + | chr5.1:19259484-19259503 | MS.gene000635:CDS | 35.0% |
| ACCTCAACTTCACAAGCAAA+TGG | + | chr5.1:19259447-19259466 | MS.gene000635:CDS | 40.0% | |
| ACTGAAGCTGAAAGGAAACT+AGG | + | chr5.1:19260632-19260651 | MS.gene000635:CDS | 40.0% | |
| ATTCCGGCTACTCCTATTAA+AGG | + | chr5.1:19258526-19258545 | MS.gene000635:CDS | 40.0% | |
| ATTGTTAGAAGAACGTGCAC+AGG | + | chr5.1:19261106-19261125 | MS.gene000635:CDS | 40.0% | |
| ATTTCATCGGCAAAACCAAC+TGG | + | chr5.1:19260350-19260369 | MS.gene000635:intron | 40.0% | |
| CACAAGCAAATGGCAATATG+TGG | + | chr5.1:19259457-19259476 | MS.gene000635:CDS | 40.0% | |
| CATTGTATAGAACGGCCTTA+TGG | - | chr5.1:19260810-19260829 | None:intergenic | 40.0% | |
| CGACTGTTCATCGTTAGTTA+CGG | + | chr5.1:19258804-19258823 | MS.gene000635:intron | 40.0% | |
| CGGAAAATTCCTTGATTAGC+TGG | - | chr5.1:19259074-19259093 | None:intergenic | 40.0% | |
| CGTAACTAACGATGAACAGT+CGG | - | chr5.1:19258806-19258825 | None:intergenic | 40.0% | |
| GAAGTGAAGCTGAATATGAC+AGG | + | chr5.1:19258761-19258780 | MS.gene000635:CDS | 40.0% | |
| GAGTGTGAGTTGCATTGTTT+AGG | + | chr5.1:19258619-19258638 | MS.gene000635:intron | 40.0% | |
| TATTTCCACGTGACCCAAAA+AGG | + | chr5.1:19261417-19261436 | MS.gene000635:CDS | 40.0% | |
| TGTTGAAACTGTACAGTGCT+TGG | + | chr5.1:19258408-19258427 | MS.gene000635:CDS | 40.0% | |
| TTAAGACTAGAAGACTTCGG+AGG | - | chr5.1:19260427-19260446 | None:intergenic | 40.0% | |
| TTATGGCAACATCCCATTAG+AGG | + | chr5.1:19258231-19258250 | MS.gene000635:CDS | 40.0% | |
| TTGCAAACACCAGCTAATCA+AGG | + | chr5.1:19259062-19259081 | MS.gene000635:CDS | 40.0% | |
| TTTAATAGGAGTAGCCGGAA+TGG | - | chr5.1:19258527-19258546 | None:intergenic | 40.0% | |
| ! | ACAACTTGTTCGTGTGAATC+AGG | + | chr5.1:19259010-19259029 | MS.gene000635:CDS | 40.0% |
| ! | ATTAATGGATCTAGTGAGGG+TGG | + | chr5.1:19259370-19259389 | MS.gene000635:CDS | 40.0% |
| ! | CGTTTTACCCTTCCAAATAG+AGG | + | chr5.1:19258729-19258748 | MS.gene000635:CDS | 40.0% |
| ! | GAAGCATCCTCTATTTGGAA+GGG | - | chr5.1:19258739-19258758 | None:intergenic | 40.0% |
| ! | GATTTTGCTTTGCAGGAAGT+TGG | + | chr5.1:19260578-19260597 | MS.gene000635:intron | 40.0% |
| ! | GGAGTAGAAATTGAGCCTTT+TGG | + | chr5.1:19260599-19260618 | MS.gene000635:CDS | 40.0% |
| ! | GTGTGTTTGAAATCGTTGAG+GGG | + | chr5.1:19259630-19259649 | MS.gene000635:intron | 40.0% |
| ! | TTGCCATAATTGGTGGCTAA+GGG | - | chr5.1:19258220-19258239 | None:intergenic | 40.0% |
| !! | AGAAGCATCCTCTATTTGGA+AGG | - | chr5.1:19258740-19258759 | None:intergenic | 40.0% |
| !! | AGAAGGTATTGAGATGCTCA+AGG | + | chr5.1:19260063-19260082 | MS.gene000635:CDS | 40.0% |
| !! | AGAAGTATCTTGAAGCTGTG+AGG | + | chr5.1:19259757-19259776 | MS.gene000635:CDS | 40.0% |
| !! | ATGGAGTTAAGGCACTGATA+AGG | + | chr5.1:19260210-19260229 | MS.gene000635:intron | 40.0% |
| !! | GAGCAAGGCATTGTATAGAA+CGG | - | chr5.1:19260818-19260837 | None:intergenic | 40.0% |
| !! | TATTTGTTGTCGCTTAGGTG+AGG | + | chr5.1:19261046-19261065 | MS.gene000635:intron | 40.0% |
| !!! | TTAACCGTGTTTTTGAGGTC+GGG | + | chr5.1:19259485-19259504 | MS.gene000635:CDS | 40.0% |
| !!! | TTTTTGTAATGGATGCAGGC+TGG | + | chr5.1:19258984-19259003 | MS.gene000635:intron | 40.0% |
| AACGCCATCTTCTTACTCAC+TGG | - | chr5.1:19258370-19258389 | None:intergenic | 45.0% | |
| AAGCGACACTCAATGCTACA+GGG | - | chr5.1:19261202-19261221 | None:intergenic | 45.0% | |
| AAGTAAAAAAGCCGCCAAGC+TGG | + | chr5.1:19258126-19258145 | MS.gene000635:CDS | 45.0% | |
| AATCGTCAAGTGCTTTGACC+TGG | - | chr5.1:19258297-19258316 | None:intergenic | 45.0% | |
| ACACAGATGCCTGTGAGTAA+AGG | - | chr5.1:19259533-19259552 | None:intergenic | 45.0% | |
| ACACCTTTAGCGGTTCGAAT+GGG | - | chr5.1:19259791-19259810 | None:intergenic | 45.0% | |
| ACATGCCAGCATCCTTTACA+GGG | - | chr5.1:19260307-19260326 | None:intergenic | 45.0% | |
| ACGACCAGTGAGTAAGAAGA+TGG | + | chr5.1:19258363-19258382 | MS.gene000635:CDS | 45.0% | |
| ACTGCAGATTCACAGGGTTA+TGG | - | chr5.1:19260012-19260031 | None:intergenic | 45.0% | |
| AGGCATCTGTGTGAGTTTAC+TGG | + | chr5.1:19259541-19259560 | MS.gene000635:CDS | 45.0% | |
| AGTACCTGCGAAATACTCTG+CGG | + | chr5.1:19260029-19260048 | MS.gene000635:intron | 45.0% | |
| ATCACGACGCTGAGTTAGAA+AGG | + | chr5.1:19260178-19260197 | MS.gene000635:intron | 45.0% | |
| ATCGTCAAGTGCTTTGACCT+GGG | - | chr5.1:19258296-19258315 | None:intergenic | 45.0% | |
| ATCTGCTCACTCACTGAATC+AGG | - | chr5.1:19258445-19258464 | None:intergenic | 45.0% | |
| ATGTCTCTACTACTGAACCC+TGG | + | chr5.1:19261237-19261256 | MS.gene000635:intron | 45.0% | |
| CAGAGGATTCCTTTACTCAC+AGG | + | chr5.1:19259521-19259540 | MS.gene000635:CDS | 45.0% | |
| CGGCAAAACCAACTGGAAAT+TGG | + | chr5.1:19260357-19260376 | MS.gene000635:intron | 45.0% | |
| CGTGTTGTAATGCTCTTCTG+TGG | + | chr5.1:19261368-19261387 | MS.gene000635:CDS | 45.0% | |
| GAGCCTAACCAATTTCCAGT+TGG | - | chr5.1:19260368-19260387 | None:intergenic | 45.0% | |
| GATTGACTGCCACTATTTCG+AGG | + | chr5.1:19259582-19259601 | MS.gene000635:CDS | 45.0% | |
| GCCATTTGCTTGTGAAGTTG+AGG | - | chr5.1:19259451-19259470 | None:intergenic | 45.0% | |
| GTGCCTTTAATAGGAGTAGC+CGG | - | chr5.1:19258532-19258551 | None:intergenic | 45.0% | |
| TAAGCGACACTCAATGCTAC+AGG | - | chr5.1:19261203-19261222 | None:intergenic | 45.0% | |
| TACACCTTTAGCGGTTCGAA+TGG | - | chr5.1:19259792-19259811 | None:intergenic | 45.0% | |
| TATCCTTCACCGATACCCTT+TGG | + | chr5.1:19260784-19260803 | MS.gene000635:CDS | 45.0% | |
| TCGAGGTATATCTGTCACAC+TGG | + | chr5.1:19259599-19259618 | MS.gene000635:intron | 45.0% | |
| TCGTTTGACGTCTTTATCCG+TGG | + | chr5.1:19260860-19260879 | MS.gene000635:CDS | 45.0% | |
| TCTGATGATTCCGACGATGA+TGG | - | chr5.1:19258100-19258119 | None:intergenic | 45.0% | |
| TGATTCAGTGAGTGAGCAGA+TGG | + | chr5.1:19258444-19258463 | MS.gene000635:CDS | 45.0% | |
| TGCTGAGAGATTAGAGACAG+AGG | - | chr5.1:19258194-19258213 | None:intergenic | 45.0% | |
| TGCTGAGTGGTGCCTTTAAT+AGG | - | chr5.1:19258541-19258560 | None:intergenic | 45.0% | |
| TGGGATGTTGCCATAATTGG+TGG | - | chr5.1:19258227-19258246 | None:intergenic | 45.0% | |
| ! | CAAAGCACTTGACGATTCAC+TGG | + | chr5.1:19258300-19258319 | MS.gene000635:CDS | 45.0% |
| ! | GTTGCCATAATTGGTGGCTA+AGG | - | chr5.1:19258221-19258240 | None:intergenic | 45.0% |
| ! | TCATGGCGTTGTTTCCATTC+CGG | + | chr5.1:19258510-19258529 | MS.gene000635:CDS | 45.0% |
| ! | TGCCATAATTGGTGGCTAAG+GGG | - | chr5.1:19258219-19258238 | None:intergenic | 45.0% |
| ! | TGGATTGGAGCTCCTCTAAT+GGG | - | chr5.1:19258246-19258265 | None:intergenic | 45.0% |
| ! | TTGGATTGGAGCTCCTCTAA+TGG | - | chr5.1:19258247-19258266 | None:intergenic | 45.0% |
| !! | CTGGTCTTGATGCTGAAATG+CGG | + | chr5.1:19259560-19259579 | MS.gene000635:CDS | 45.0% |
| !! | TATTAAAGGCACCACTCAGC+AGG | + | chr5.1:19258540-19258559 | MS.gene000635:CDS | 45.0% |
| !!! | GACATTTTGGAGCCCTGTAA+AGG | + | chr5.1:19260292-19260311 | MS.gene000635:intron | 45.0% |
| !!! | GTAATCCTTTTTGGGTCACG+TGG | - | chr5.1:19261425-19261444 | None:intergenic | 45.0% |
| !!! | TAACCGTGTTTTTGAGGTCG+GGG | + | chr5.1:19259486-19259505 | MS.gene000635:CDS | 45.0% |
| ACACCCTAGGACAGAACAGT+GGG | - | chr5.1:19260390-19260409 | None:intergenic | 50.0% | |
| ACCGATACCCTTTGGCCATA+AGG | + | chr5.1:19260792-19260811 | MS.gene000635:CDS | 50.0% | |
| ACGACGCTGAGTTAGAAAGG+TGG | + | chr5.1:19260181-19260200 | MS.gene000635:intron | 50.0% | |
| AGAGACAGAGGTAGTAGCAG+CGG | - | chr5.1:19258182-19258201 | None:intergenic | 50.0% | |
| AGATATGGTGCACCACTGCA+TGG | + | chr5.1:19261323-19261342 | MS.gene000635:intron | 50.0% | |
| AGCTGGTAAAGCTCCGACAT+CGG | + | chr5.1:19258143-19258162 | MS.gene000635:CDS | 50.0% | |
| ATGCAGTGGTGCACCATATC+TGG | - | chr5.1:19261324-19261343 | None:intergenic | 50.0% | |
| ATGTCGGAGCTTTACCAGCT+TGG | - | chr5.1:19258143-19258162 | None:intergenic | 50.0% | |
| CACATGCCAGCATCCTTTAC+AGG | - | chr5.1:19260308-19260327 | None:intergenic | 50.0% | |
| CGACGCTGAGTTAGAAAGGT+GGG | + | chr5.1:19260182-19260201 | MS.gene000635:intron | 50.0% | |
| CTGCGGCTTACATACGAAGA+AGG | + | chr5.1:19260046-19260065 | MS.gene000635:CDS | 50.0% | |
| GACCCCTTAGCCACCAATTA+TGG | + | chr5.1:19258214-19258233 | MS.gene000635:CDS | 50.0% | |
| GTACCCATTCGAACCGCTAA+AGG | + | chr5.1:19259785-19259804 | MS.gene000635:CDS | 50.0% | |
| GTTAGAAAGGTGGGAGGTGA+TGG | + | chr5.1:19260191-19260210 | MS.gene000635:intron | 50.0% | |
| TGAATATGACAGGGCCAGTC+AGG | + | chr5.1:19258771-19258790 | MS.gene000635:CDS | 50.0% | |
| ! | AGAACGGCCTTATGGCCAAA+GGG | - | chr5.1:19260802-19260821 | None:intergenic | 50.0% |
| ! | GCAGGTACTGCAGATTCACA+GGG | - | chr5.1:19260018-19260037 | None:intergenic | 50.0% |
| ! | GCCTTATGGCCAAAGGGTAT+CGG | - | chr5.1:19260796-19260815 | None:intergenic | 50.0% |
| ! | TAAGCCGCAGAGTATTTCGC+AGG | - | chr5.1:19260036-19260055 | None:intergenic | 50.0% |
| ! | TAGAACGGCCTTATGGCCAA+AGG | - | chr5.1:19260803-19260822 | None:intergenic | 50.0% |
| AAGTGCTTTGACCTGGGTCC+GGG | - | chr5.1:19258290-19258309 | None:intergenic | 55.0% | |
| CAAGTGCTTTGACCTGGGTC+CGG | - | chr5.1:19258291-19258310 | None:intergenic | 55.0% | |
| CACACCCTAGGACAGAACAG+TGG | - | chr5.1:19260391-19260410 | None:intergenic | 55.0% | |
| CAGCCCCGACCTCAAAAACA+CGG | - | chr5.1:19259492-19259511 | None:intergenic | 55.0% | |
| CGCTGAGTTAGAAAGGTGGG+AGG | + | chr5.1:19260185-19260204 | MS.gene000635:intron | 55.0% | |
| GAACGTCCACCACAGACTCA+CGG | - | chr5.1:19258492-19258511 | None:intergenic | 55.0% | |
| GAAGTTGAGGTGACTGAGCC+AGG | - | chr5.1:19259438-19259457 | None:intergenic | 55.0% | |
| GACTTCGGAGGATCAGCTCT+CGG | - | chr5.1:19260415-19260434 | None:intergenic | 55.0% | |
| GATGGACCGGTGTCTTGGAT+TGG | - | chr5.1:19258261-19258280 | None:intergenic | 55.0% | |
| GCTCCCACTGTTCTGTCCTA+GGG | + | chr5.1:19260384-19260403 | MS.gene000635:intron | 55.0% | |
| GCTCCGACATCGGCAACAAA+TGG | + | chr5.1:19258153-19258172 | MS.gene000635:CDS | 55.0% | |
| GGAGCTCCAATCCAAGACAC+CGG | + | chr5.1:19258252-19258271 | MS.gene000635:CDS | 55.0% | |
| GTCGGTGCAATGTACCTGAC+TGG | - | chr5.1:19258788-19258807 | None:intergenic | 55.0% | |
| TATGGTGCACCACTGCATGG+TGG | + | chr5.1:19261326-19261345 | MS.gene000635:CDS | 55.0% | |
| TCGGAGCTTTACCAGCTTGG+CGG | - | chr5.1:19258140-19258159 | None:intergenic | 55.0% | |
| TGCACCAGCACCATCATCGT+CGG | + | chr5.1:19258087-19258106 | MS.gene000635:CDS | 55.0% | |
| TGGAGCCCTGTAAAGGATGC+TGG | + | chr5.1:19260299-19260318 | MS.gene000635:intron | 55.0% | |
| TGGTGCAGGCTCTTTGCACT+CGG | - | chr5.1:19258074-19258093 | None:intergenic | 55.0% | |
| ! | CGCAGGTACTGCAGATTCAC+AGG | - | chr5.1:19260019-19260038 | None:intergenic | 55.0% |
| ! | CGGCCATTTGTTGCCGATGT+CGG | - | chr5.1:19258159-19258178 | None:intergenic | 55.0% |
| ! | GATTCCGACGATGATGGTGC+TGG | - | chr5.1:19258094-19258113 | None:intergenic | 55.0% |
| !! | GAGTCTGTGGTGGACGTTCA+TGG | + | chr5.1:19258493-19258512 | MS.gene000635:CDS | 55.0% |
| !! | GGTGGGAGGTGATGGAGTTA+AGG | + | chr5.1:19260199-19260218 | MS.gene000635:intron | 55.0% |
| !! | TGGCCAAAGGGTATCGGTGA+AGG | - | chr5.1:19260790-19260809 | None:intergenic | 55.0% |
| AGCTCTCAGCCGTGAGTCTG+TGG | + | chr5.1:19258480-19258499 | MS.gene000635:CDS | 60.0% | |
| AGTGCTTTGACCTGGGTCCG+GGG | - | chr5.1:19258289-19258308 | None:intergenic | 60.0% | |
| CGGGGCTGTGTATAGAGCAG+AGG | + | chr5.1:19259504-19259523 | MS.gene000635:CDS | 60.0% | |
| GACAGAGGTAGTAGCAGCGG+CGG | - | chr5.1:19258179-19258198 | None:intergenic | 60.0% | |
| GCACCACTGCATGGTGGCTT+TGG | + | chr5.1:19261332-19261351 | MS.gene000635:CDS | 60.0% | |
| GGCTCCCACTGTTCTGTCCT+AGG | + | chr5.1:19260383-19260402 | MS.gene000635:intron | 60.0% | |
| GGTGCAGGCTCTTTGCACTC+GGG | - | chr5.1:19258073-19258092 | None:intergenic | 60.0% | |
| TCAGCTCTCGGTCACACCCT+AGG | - | chr5.1:19260403-19260422 | None:intergenic | 60.0% | |
| TCTCAGCCGTGAGTCTGTGG+TGG | + | chr5.1:19258483-19258502 | MS.gene000635:CDS | 60.0% | |
| !! | CAAAGGGCATCCTGCATGCC+TGG | + | chr5.1:19259417-19259436 | MS.gene000635:CDS | 60.0% |
| !! | GACGATGATGGTGCTGGTGC+AGG | - | chr5.1:19258088-19258107 | None:intergenic | 60.0% |
| GACGGGATGGACCGGTGTCT+TGG | - | chr5.1:19258266-19258285 | None:intergenic | 65.0% | |
| GCGCCAAAGCCACCATGCAG+TGG | - | chr5.1:19261338-19261357 | None:intergenic | 65.0% | |
| GGTGACTGAGCCAGGCATGC+AGG | - | chr5.1:19259430-19259449 | None:intergenic | 65.0% | |
| GTGCTTTGACCTGGGTCCGG+GGG | - | chr5.1:19258288-19258307 | None:intergenic | 65.0% | |
| TTTGACCTGGGTCCGGGGGA+CGG | - | chr5.1:19258284-19258303 | None:intergenic | 65.0% | |
| !! | CTGCATGGTGGCTTTGGCGC+AGG | + | chr5.1:19261338-19261357 | MS.gene000635:CDS | 65.0% |
| !! | TGGTGGCTTTGGCGCAGGCT+TGG | + | chr5.1:19261343-19261362 | MS.gene000635:CDS | 65.0% |
| TTGACCTGGGTCCGGGGGAC+GGG | - | chr5.1:19258283-19258302 | None:intergenic | 70.0% | |
| CACCGGTCCATCCCGTCCCC+CGG | + | chr5.1:19258269-19258288 | MS.gene000635:CDS | 75.0% | |
| GTCCGGGGGACGGGATGGAC+CGG | - | chr5.1:19258274-19258293 | None:intergenic | 75.0% | |
| ! | CCATCCCGTCCCCCGGACCC+AGG | + | chr5.1:19258276-19258295 | MS.gene000635:CDS | 80.0% |
| ! | CCTGGGTCCGGGGGACGGGA+TGG | - | chr5.1:19258279-19258298 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 19258061 | 19261451 | 19258061 | ID=MS.gene000635 |
| chr5.1 | mRNA | 19258061 | 19261451 | 19258061 | ID=MS.gene000635.t1;Parent=MS.gene000635 |
| chr5.1 | exon | 19258061 | 19258561 | 19258061 | ID=MS.gene000635.t1.exon1;Parent=MS.gene000635.t1 |
| chr5.1 | CDS | 19258061 | 19258561 | 19258061 | ID=cds.MS.gene000635.t1;Parent=MS.gene000635.t1 |
| chr5.1 | exon | 19258682 | 19258792 | 19258682 | ID=MS.gene000635.t1.exon2;Parent=MS.gene000635.t1 |
| chr5.1 | CDS | 19258682 | 19258792 | 19258682 | ID=cds.MS.gene000635.t1;Parent=MS.gene000635.t1 |
| chr5.1 | exon | 19259002 | 19259115 | 19259002 | ID=MS.gene000635.t1.exon3;Parent=MS.gene000635.t1 |
| chr5.1 | CDS | 19259002 | 19259115 | 19259002 | ID=cds.MS.gene000635.t1;Parent=MS.gene000635.t1 |
| chr5.1 | exon | 19259313 | 19259603 | 19259313 | ID=MS.gene000635.t1.exon4;Parent=MS.gene000635.t1 |
| chr5.1 | CDS | 19259313 | 19259603 | 19259313 | ID=cds.MS.gene000635.t1;Parent=MS.gene000635.t1 |
| chr5.1 | exon | 19259696 | 19259806 | 19259696 | ID=MS.gene000635.t1.exon5;Parent=MS.gene000635.t1 |
| chr5.1 | CDS | 19259696 | 19259806 | 19259696 | ID=cds.MS.gene000635.t1;Parent=MS.gene000635.t1 |
| chr5.1 | exon | 19260031 | 19260084 | 19260031 | ID=MS.gene000635.t1.exon6;Parent=MS.gene000635.t1 |
| chr5.1 | CDS | 19260031 | 19260084 | 19260031 | ID=cds.MS.gene000635.t1;Parent=MS.gene000635.t1 |
| chr5.1 | exon | 19260593 | 19260672 | 19260593 | ID=MS.gene000635.t1.exon7;Parent=MS.gene000635.t1 |
| chr5.1 | CDS | 19260593 | 19260672 | 19260593 | ID=cds.MS.gene000635.t1;Parent=MS.gene000635.t1 |
| chr5.1 | exon | 19260766 | 19260881 | 19260766 | ID=MS.gene000635.t1.exon8;Parent=MS.gene000635.t1 |
| chr5.1 | CDS | 19260766 | 19260881 | 19260766 | ID=cds.MS.gene000635.t1;Parent=MS.gene000635.t1 |
| chr5.1 | exon | 19261063 | 19261177 | 19261063 | ID=MS.gene000635.t1.exon9;Parent=MS.gene000635.t1 |
| chr5.1 | CDS | 19261063 | 19261177 | 19261063 | ID=cds.MS.gene000635.t1;Parent=MS.gene000635.t1 |
| chr5.1 | exon | 19261325 | 19261451 | 19261325 | ID=MS.gene000635.t1.exon10;Parent=MS.gene000635.t1 |
| chr5.1 | CDS | 19261325 | 19261451 | 19261325 | ID=cds.MS.gene000635.t1;Parent=MS.gene000635.t1 |
| Gene Sequence |
| Protein sequence |
