Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33126.t1 | XP_003588866.1 | 91.7 | 541 | 35 | 2 | 1 | 531 | 1 | 541 | 8.10E-271 | 942.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33126.t1 | Q9M084 | 67.0 | 500 | 148 | 2 | 49 | 531 | 59 | 558 | 5.6e-196 | 685.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33126.t1 | G7I885 | 91.7 | 541 | 35 | 2 | 1 | 531 | 1 | 541 | 5.8e-271 | 942.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052954 | MS.gene33126 | -0.803226 | 3.86E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene33126 | -0.805558 | 1.26E-49 | -1.69E-46 |
| MS.gene059872 | MS.gene33126 | 0.802885 | 4.54E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33126.t1 | MTR_1g014140 | 94.085 | 541 | 22 | 2 | 1 | 531 | 1 | 541 | 0.0 | 1012 |
| MS.gene33126.t1 | MTR_5g028360 | 70.350 | 543 | 134 | 5 | 1 | 531 | 62 | 589 | 0.0 | 751 |
| MS.gene33126.t1 | MTR_4g100920 | 25.304 | 494 | 287 | 16 | 77 | 526 | 86 | 541 | 2.75e-30 | 124 |
| MS.gene33126.t1 | MTR_8g102050 | 30.961 | 281 | 174 | 8 | 261 | 528 | 275 | 548 | 3.76e-26 | 112 |
| MS.gene33126.t1 | MTR_7g101050 | 31.560 | 282 | 173 | 10 | 261 | 528 | 298 | 573 | 3.00e-25 | 110 |
| MS.gene33126.t1 | MTR_2g036600 | 23.780 | 492 | 326 | 15 | 71 | 523 | 107 | 588 | 1.49e-22 | 102 |
| MS.gene33126.t1 | MTR_4g127770 | 22.607 | 491 | 320 | 15 | 77 | 523 | 601 | 1075 | 6.56e-20 | 94.4 |
| MS.gene33126.t1 | MTR_4g127790 | 23.810 | 357 | 236 | 11 | 199 | 522 | 32 | 385 | 5.02e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33126.t1 | AT4G31180 | 63.196 | 557 | 177 | 4 | 3 | 531 | 2 | 558 | 0.0 | 719 |
| MS.gene33126.t1 | AT4G31180 | 63.196 | 557 | 177 | 4 | 3 | 531 | 2 | 558 | 0.0 | 719 |
| MS.gene33126.t1 | AT4G26870 | 64.648 | 512 | 172 | 4 | 26 | 531 | 24 | 532 | 0.0 | 679 |
| MS.gene33126.t1 | AT5G56680 | 30.108 | 279 | 175 | 8 | 261 | 526 | 296 | 567 | 4.72e-27 | 115 |
| MS.gene33126.t1 | AT4G17300 | 25.536 | 466 | 252 | 15 | 112 | 526 | 161 | 582 | 1.24e-26 | 114 |
| MS.gene33126.t1 | AT4G17300 | 25.536 | 466 | 252 | 15 | 112 | 526 | 141 | 562 | 1.46e-26 | 114 |
| MS.gene33126.t1 | AT1G70980 | 28.571 | 280 | 180 | 7 | 261 | 526 | 293 | 566 | 3.40e-23 | 103 |
| MS.gene33126.t1 | AT3G07420 | 24.907 | 269 | 188 | 8 | 265 | 524 | 368 | 631 | 4.88e-12 | 68.9 |
Find 130 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTACATTGATTCTTTC+AGG | 0.118251 | 1.1:-7579867 | MS.gene33126:intron |
| CAGCTTTGCGAGTTCCTTCT+TGG | 0.187183 | 1.1:+7583046 | None:intergenic |
| ATTCCAGCCGCTCCTATTAA+AGG | 0.200895 | 1.1:-7582666 | MS.gene33126:CDS |
| CACAAGCAAATGTCAATATT+TGG | 0.203397 | 1.1:-7581765 | MS.gene33126:CDS |
| TTCTTAGTCATCAGAGAAAA+TGG | 0.255342 | 1.1:-7582804 | MS.gene33126:CDS |
| CAAACAAATTAACACCTTTA+GGG | 0.270476 | 1.1:+7581422 | None:intergenic |
| TCAAAAGAGTTACTGTAGTT+TGG | 0.284688 | 1.1:+7580171 | None:intergenic |
| TATGTAAGCCGCAGAGTATT+TGG | 0.299031 | 1.1:+7581238 | None:intergenic |
| TGAAATTGAGAAGGCCATTC+AGG | 0.299926 | 1.1:-7582406 | MS.gene33126:intron |
| TGTTGTGAGGCACCTTTAAT+AGG | 0.308209 | 1.1:+7582654 | None:intergenic |
| TGGAAAATTCCTTGATTTGC+TGG | 0.311128 | 1.1:+7582097 | None:intergenic |
| AGGCATCTGTGCGAGTTTAC+AGG | 0.319353 | 1.1:-7581681 | MS.gene33126:CDS |
| CAAAAGAGTTACTGTAGTTT+GGG | 0.335107 | 1.1:+7580172 | None:intergenic |
| CACCGTACAGTGCTTGGTTC+AGG | 0.346864 | 1.1:-7582778 | MS.gene33126:CDS |
| CACAATACAGTTTCCTCACT+TGG | 0.354867 | 1.1:+7582487 | None:intergenic |
| TCGACTTGGGTCCAGTCGTT+AGG | 0.357312 | 1.1:+7582912 | None:intergenic |
| CAGAAGATTCCTTTACTCAT+AGG | 0.359787 | 1.1:-7581701 | MS.gene33126:CDS |
| CACACTCCTAAGTTGATTGC+TGG | 0.375345 | 1.1:-7581867 | MS.gene33126:CDS |
| TAGCAAGGCATTGTATAAAA+TGG | 0.394303 | 1.1:+7580201 | None:intergenic |
| AGGTGGCGGCGGCAACTTCT+CGG | 0.397158 | 1.1:+7583009 | None:intergenic |
| GTACCACCACACGGTGGCTT+TGG | 0.402704 | 1.1:-7579649 | MS.gene33126:CDS |
| ACAACTTGTTCGTGTGAATC+AGG | 0.411639 | 1.1:-7582158 | MS.gene33126:CDS |
| TACAGGTCTTGATGTTGAAA+TGG | 0.423398 | 1.1:-7581664 | MS.gene33126:CDS |
| CAAGAAGGAACTCGCAAAGC+TGG | 0.423555 | 1.1:-7583045 | MS.gene33126:CDS |
| CAAAGGGAAACCTGCATGCC+TGG | 0.426932 | 1.1:-7581805 | MS.gene33126:CDS |
| AGGGTGGAGCTGCTGTCTTT+AGG | 0.428133 | 1.1:-7581836 | MS.gene33126:CDS |
| GGAGTAGAGATTGAACCTTT+TGG | 0.442706 | 1.1:-7580421 | MS.gene33126:CDS |
| AACACCTTTAGGGGTTCAAA+CGG | 0.444877 | 1.1:+7581432 | None:intergenic |
| ATCTGCGGACTCACTAAATC+AGG | 0.450583 | 1.1:+7582750 | None:intergenic |
| CTTGATTTGCTGGTGTTCGC+AGG | 0.452358 | 1.1:+7582107 | None:intergenic |
| GCCCTCCCACGGATTAGAAC+CGG | 0.456675 | 1.1:+7582861 | None:intergenic |
| TGGAGCTGCTGTCTTTAGGC+TGG | 0.464922 | 1.1:-7581832 | MS.gene33126:CDS |
| CGACTTGGGTCCAGTCGTTA+GGG | 0.465168 | 1.1:+7582913 | None:intergenic |
| GATTAAGAAACATTATTATG+AGG | 0.466183 | 1.1:-7581640 | MS.gene33126:intron |
| TTAGGTGAGGAGATAATATC+AGG | 0.470682 | 1.1:-7579964 | MS.gene33126:intron |
| TATTAAAGGTGCCTCACAAC+AGG | 0.473545 | 1.1:-7582652 | MS.gene33126:intron |
| GAGTCTATTGTCGATGTTGA+AGG | 0.473757 | 1.1:-7582699 | MS.gene33126:CDS |
| TTACAGTTCCAACTTGAGAC+TGG | 0.475421 | 1.1:+7582071 | None:intergenic |
| AATGCCATCTTCTTCCCAAC+TGG | 0.476125 | 1.1:+7582825 | None:intergenic |
| CTTTGCGAGTTCCTTCTTGG+AGG | 0.479823 | 1.1:+7583049 | None:intergenic |
| TGAGATTCTGAAGTTGACAT+TGG | 0.488423 | 1.1:+7583110 | None:intergenic |
| CGGTGGCTTTGGAGTAGGCT+TGG | 0.490259 | 1.1:-7579638 | MS.gene33126:CDS |
| GCAGCATCCTCGATATTAAA+CGG | 0.494569 | 1.1:+7582441 | None:intergenic |
| TGGTTTCACCGTACAGTGCT+TGG | 0.499781 | 1.1:-7582784 | MS.gene33126:CDS |
| TTTGTTTCTGATGACAGTGT+CGG | 0.500363 | 1.1:+7583083 | None:intergenic |
| AAAATGGTCTTACAGCCAAC+GGG | 0.502027 | 1.1:+7580217 | None:intergenic |
| GTCTTACAGCCAACGGGTAC+CGG | 0.506627 | 1.1:+7580223 | None:intergenic |
| TCAGTATTCAAGTCACCAAA+AGG | 0.506705 | 1.1:+7580406 | None:intergenic |
| CTAGATCCAGCAATCAACTT+AGG | 0.510006 | 1.1:+7581861 | None:intergenic |
| GGTGACTGAGCCAGGCATGC+AGG | 0.511713 | 1.1:+7581795 | None:intergenic |
| TTTAATAGGAGCGGCTGGAA+TGG | 0.513685 | 1.1:+7582668 | None:intergenic |
| GCACCTTTAATAGGAGCGGC+TGG | 0.516328 | 1.1:+7582663 | None:intergenic |
| CACAAGCTATTCGACCAGTT+GGG | 0.517268 | 1.1:-7582839 | MS.gene33126:CDS |
| GCACAAGCTATTCGACCAGT+TGG | 0.517849 | 1.1:-7582840 | MS.gene33126:CDS |
| TTCCACATCCAGTCTCAAGT+TGG | 0.521976 | 1.1:-7582079 | MS.gene33126:CDS |
| ACACCTTTAGGGGTTCAAAC+GGG | 0.524064 | 1.1:+7581433 | None:intergenic |
| CAGCCAACGGGTACCGGTGA+AGG | 0.524085 | 1.1:+7580229 | None:intergenic |
| CTGCGGCTTACATATGAAGA+AGG | 0.526092 | 1.1:-7581229 | MS.gene33126:CDS |
| AATCGTTGAGAGCCTCGACT+TGG | 0.527817 | 1.1:+7582898 | None:intergenic |
| AATGAATATATATACCTGAA+TGG | 0.529761 | 1.1:+7582392 | None:intergenic |
| GAAACTGTATTGTGTGAGTA+AGG | 0.532678 | 1.1:-7582478 | MS.gene33126:CDS |
| AAACAAATTAACACCTTTAG+GGG | 0.533347 | 1.1:+7581423 | None:intergenic |
| GAATAGCTTGTGCCCTCCCA+CGG | 0.535699 | 1.1:+7582850 | None:intergenic |
| CTGCGAACACCAGCAAATCA+AGG | 0.537117 | 1.1:-7582106 | MS.gene33126:CDS |
| GAAGTTGAGGTGACTGAGCC+AGG | 0.538658 | 1.1:+7581787 | None:intergenic |
| TCTTTAGGCTGGACTACAAA+GGG | 0.538957 | 1.1:-7581821 | MS.gene33126:CDS |
| AGAAAGGAAACTAGGCCAGC+TGG | 0.539715 | 1.1:-7580380 | MS.gene33126:CDS |
| TACTCTGCCGTTTAATATCG+AGG | 0.540763 | 1.1:-7582448 | MS.gene33126:CDS |
| CGATGTAGCAGAGGTGGCGG+CGG | 0.543849 | 1.1:+7582998 | None:intergenic |
| TCGATATTAAACGGCAGAGT+AGG | 0.544830 | 1.1:+7582450 | None:intergenic |
| AACAAGCCGGTTCTAATCCG+TGG | 0.544852 | 1.1:-7582867 | MS.gene33126:CDS |
| CCACACGGTGGCTTTGGAGT+AGG | 0.547341 | 1.1:-7579643 | MS.gene33126:CDS |
| TTTGAACACAAAATGTAAGA+AGG | 0.547679 | 1.1:-7581481 | MS.gene33126:CDS |
| TAAAATGGTCTTACAGCCAA+CGG | 0.552316 | 1.1:+7580216 | None:intergenic |
| ATCGTTGAGAGCCTCGACTT+GGG | 0.557567 | 1.1:+7582899 | None:intergenic |
| CGTTAGGGAGCTCAATGAGC+GGG | 0.558240 | 1.1:+7582928 | None:intergenic |
| GACATTTGCTTGTGAAGTTG+AGG | 0.558674 | 1.1:+7581774 | None:intergenic |
| GCACAGATGCCTATGAGTAA+AGG | 0.560403 | 1.1:+7581692 | None:intergenic |
| TTCCAACTTGAGACTGGATG+TGG | 0.562506 | 1.1:+7582077 | None:intergenic |
| AGTCGATGTAGCAGAGGTGG+CGG | 0.572655 | 1.1:+7582995 | None:intergenic |
| CAGAGTTCTATATCCTTCAC+CGG | 0.573477 | 1.1:-7580242 | MS.gene33126:CDS |
| ATTAAACGGCAGAGTAGGAA+TGG | 0.575600 | 1.1:+7582455 | None:intergenic |
| TAGTTTGGGTTGTCATAGCA+AGG | 0.575643 | 1.1:+7580186 | None:intergenic |
| GAAGAACGTGCACAAGCTTG+CGG | 0.577219 | 1.1:-7579910 | MS.gene33126:CDS |
| TCGACCAGTTGGGAAGAAGA+TGG | 0.581394 | 1.1:-7582829 | MS.gene33126:CDS |
| AGACTCACGGCTGAGAGCGG+CGG | 0.581736 | 1.1:+7582716 | None:intergenic |
| TGCACAAGCTTGCGGCATTG+AGG | 0.583418 | 1.1:-7579902 | MS.gene33126:CDS |
| ACTGAAGCAGAAAGGAAACT+AGG | 0.584857 | 1.1:-7580388 | MS.gene33126:CDS |
| GAGAGTCGATGTAGCAGAGG+TGG | 0.585897 | 1.1:+7582992 | None:intergenic |
| GTCTTTAGGCTGGACTACAA+AGG | 0.586503 | 1.1:-7581822 | MS.gene33126:CDS |
| AAACCATAATTGACAGCAAG+GGG | 0.592667 | 1.1:+7582954 | None:intergenic |
| ACTTGAATACTGAAGCAGAA+AGG | 0.595013 | 1.1:-7580396 | MS.gene33126:CDS |
| TGATTTAGTGAGTCCGCAGA+TGG | 0.596877 | 1.1:-7582748 | MS.gene33126:CDS |
| GTACCCGTTTGAACCCCTAA+AGG | 0.597654 | 1.1:-7581436 | MS.gene33126:intron |
| AGAGAGAGTCGATGTAGCAG+AGG | 0.603238 | 1.1:+7582989 | None:intergenic |
| ACAAGCCGGTTCTAATCCGT+GGG | 0.607323 | 1.1:-7582866 | MS.gene33126:CDS |
| ATCAAAACCAACCTGTTGTG+AGG | 0.608593 | 1.1:+7582641 | None:intergenic |
| TGAGGCACCTTTAATAGGAG+CGG | 0.608618 | 1.1:+7582659 | None:intergenic |
| TCATTGAGCTCCCTAACGAC+TGG | 0.609497 | 1.1:-7582923 | MS.gene33126:CDS |
| TATCCTTCACCGGTACCCGT+TGG | 0.609544 | 1.1:-7580232 | MS.gene33126:CDS |
| GCCGGTTCTAATCCGTGGGA+GGG | 0.610769 | 1.1:-7582862 | MS.gene33126:CDS |
| CAGCAATCAACTTAGGAGTG+TGG | 0.611888 | 1.1:+7581868 | None:intergenic |
| GCGGCAAATTTCACCATCTG+CGG | 0.614321 | 1.1:+7582735 | None:intergenic |
| ATTGCTGGATCTAGTGAGGG+TGG | 0.614640 | 1.1:-7581852 | MS.gene33126:CDS |
| TATTGTCGATGTTGAAGGTG+TGG | 0.616511 | 1.1:-7582694 | MS.gene33126:CDS |
| ATCATGGTGCAATCCTGAGT+GGG | 0.620490 | 1.1:+7579551 | None:intergenic |
| AATAGACTCACGGCTGAGAG+CGG | 0.623488 | 1.1:+7582713 | None:intergenic |
| AGCCGGTTCTAATCCGTGGG+AGG | 0.623958 | 1.1:-7582863 | MS.gene33126:CDS |
| AAGTGAAGTTGAAATTGAGA+AGG | 0.624126 | 1.1:-7582415 | MS.gene33126:CDS |
| TAAGAAGGATCTCGAAGCTG+TGG | 0.629352 | 1.1:-7581466 | MS.gene33126:CDS |
| GTTGATTGCTGGATCTAGTG+AGG | 0.632210 | 1.1:-7581856 | MS.gene33126:CDS |
| CAACATCGACAATAGACTCA+CGG | 0.632667 | 1.1:+7582703 | None:intergenic |
| CGTGTAGTAATGCTCTTCTG+TGG | 0.635161 | 1.1:-7579613 | MS.gene33126:CDS |
| TGCCTGAACCAAGCACTGTA+CGG | 0.635520 | 1.1:+7582776 | None:intergenic |
| AGAAGGTATTCAGATGCTCA+AGG | 0.641602 | 1.1:-7581212 | MS.gene33126:intron |
| TTGATTGCTGGATCTAGTGA+GGG | 0.644845 | 1.1:-7581855 | MS.gene33126:CDS |
| ACTCCAAAGCCACCGTGTGG+TGG | 0.646949 | 1.1:+7579646 | None:intergenic |
| CGATTCACTACAGAACAAGC+CGG | 0.649891 | 1.1:-7582880 | MS.gene33126:CDS |
| CATCATGGTGCAATCCTGAG+TGG | 0.650761 | 1.1:+7579550 | None:intergenic |
| TAACGACTGGACCCAAGTCG+AGG | 0.659778 | 1.1:-7582910 | MS.gene33126:CDS |
| AGATATGGTGTACCACCACA+CGG | 0.671410 | 1.1:-7579658 | MS.gene33126:CDS |
| AAAACCATAATTGACAGCAA+GGG | 0.671638 | 1.1:+7582953 | None:intergenic |
| TATAGGTTGAAATCCAAGTG+AGG | 0.674003 | 1.1:-7582500 | MS.gene33126:intron |
| GCAATCCTGAGTGGGTCACG+TGG | 0.678111 | 1.1:+7579559 | None:intergenic |
| TCGTTAGGGAGCTCAATGAG+CGG | 0.683815 | 1.1:+7582927 | None:intergenic |
| TGGCGGCGGCAACTTCTCGG+CGG | 0.706873 | 1.1:+7583012 | None:intergenic |
| CCTACTCCAAAGCCACCGTG+TGG | 0.729566 | 1.1:+7579643 | None:intergenic |
| AACCATAATTGACAGCAAGG+GGG | 0.738850 | 1.1:+7582955 | None:intergenic |
| AGTATCTTCCAAATACTCTG+CGG | 0.740430 | 1.1:-7581246 | MS.gene33126:CDS |
| TATGGTGTACCACCACACGG+TGG | 0.820152 | 1.1:-7579655 | MS.gene33126:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATAATATTAGAGAAAAT+AGG | + | chr1.1:7580616-7580635 | None:intergenic | 15.0% |
| !! | ATTATATAAATGTCATTGAA+AGG | - | chr1.1:7581731-7581750 | MS.gene33126:CDS | 15.0% |
| !! | TAACTATGATATATATAAGA+TGG | - | chr1.1:7582143-7582162 | MS.gene33126:CDS | 15.0% |
| !! | TTTCAATTTAATTCAAGAAA+AGG | - | chr1.1:7581954-7581973 | MS.gene33126:intron | 15.0% |
| !! | TTTCTTGAATTAAATTGAAA+AGG | + | chr1.1:7581954-7581973 | None:intergenic | 15.0% |
| !!! | ATAATTTTAAACTTTACTAC+AGG | + | chr1.1:7581686-7581705 | None:intergenic | 15.0% |
| !!! | GATTTTGATTTTGATTATAA+TGG | - | chr1.1:7580116-7580135 | MS.gene33126:intron | 15.0% |
| !! | AAATTGATGAAAATGTACTT+GGG | - | chr1.1:7581773-7581792 | MS.gene33126:CDS | 20.0% |
| !! | AACCAAATAATTGTTACTAT+TGG | - | chr1.1:7581924-7581943 | MS.gene33126:intron | 20.0% |
| !! | AATAGTAACAATTATTTGGT+TGG | + | chr1.1:7581925-7581944 | None:intergenic | 20.0% |
| !! | AATGAATATATATACCTGAA+TGG | + | chr1.1:7580270-7580289 | None:intergenic | 20.0% |
| !! | ACCAAATAATTGTTACTATT+GGG | - | chr1.1:7581925-7581944 | MS.gene33126:intron | 20.0% |
| !! | GATTAAGAAACATTATTATG+AGG | - | chr1.1:7581019-7581038 | MS.gene33126:intron | 20.0% |
| !! | TAAATTGATGAAAATGTACT+TGG | - | chr1.1:7581772-7581791 | MS.gene33126:CDS | 20.0% |
| !! | TCAATTACAACATTTCTAAT+CGG | + | chr1.1:7580294-7580313 | None:intergenic | 20.0% |
| !! | TGTAATTCTATTTATAGGTA+TGG | - | chr1.1:7582392-7582411 | MS.gene33126:intron | 20.0% |
| !!! | CAATTTATTTGTTTTGTAGT+GGG | - | chr1.1:7581298-7581317 | MS.gene33126:intron | 20.0% |
| !!! | CATTTCTTAAGTTAGTTTAT+CGG | + | chr1.1:7580700-7580719 | None:intergenic | 20.0% |
| !!! | TCAATTTATTTGTTTTGTAG+TGG | - | chr1.1:7581297-7581316 | MS.gene33126:intron | 20.0% |
| !!! | TCAATTTTACAAAATAGACA+GGG | + | chr1.1:7581574-7581593 | None:intergenic | 20.0% |
| !!! | TCTATTTTGTAAAATTGAGA+GGG | - | chr1.1:7581576-7581595 | MS.gene33126:intron | 20.0% |
| !!! | TCTGGTTATAATGATTTTAT+GGG | - | chr1.1:7582935-7582954 | MS.gene33126:CDS | 20.0% |
| !!! | TGTTGTTTTGTTTAATATAC+CGG | - | chr1.1:7580420-7580439 | MS.gene33126:CDS | 20.0% |
| ! | AAACAAATTAACACCTTTAG+GGG | + | chr1.1:7581239-7581258 | None:intergenic | 25.0% |
| ! | ACATTATTATGAGGTACATT+TGG | - | chr1.1:7581028-7581047 | MS.gene33126:intron | 25.0% |
| ! | AGGACATATAGTTATTTGAT+TGG | - | chr1.1:7581974-7581993 | MS.gene33126:intron | 25.0% |
| ! | ATCAGAAACAAAAAGCAAAA+AGG | - | chr1.1:7579587-7579606 | MS.gene33126:CDS | 25.0% |
| ! | CAAACAAATTAACACCTTTA+GGG | + | chr1.1:7581240-7581259 | None:intergenic | 25.0% |
| ! | CCAAATAATTGTTACTATTG+GGG | - | chr1.1:7581926-7581945 | MS.gene33126:intron | 25.0% |
| ! | GATAAACAAACAAATGTGAT+AGG | - | chr1.1:7581511-7581530 | MS.gene33126:CDS | 25.0% |
| ! | GTTCAATGTCTTTGTTAATA+CGG | - | chr1.1:7582885-7582904 | MS.gene33126:CDS | 25.0% |
| ! | TATAAGATTAAACTGTACAC+AGG | + | chr1.1:7581631-7581650 | None:intergenic | 25.0% |
| ! | TCGACTGTAATTCTATTTAT+AGG | - | chr1.1:7582387-7582406 | MS.gene33126:intron | 25.0% |
| ! | TGATTGATCATTTACAGATA+TGG | - | chr1.1:7582986-7583005 | MS.gene33126:CDS | 25.0% |
| ! | TTCAATGTCTTTGTTAATAC+GGG | - | chr1.1:7582886-7582905 | MS.gene33126:CDS | 25.0% |
| ! | TTTAAACTTTACTACAGGAT+TGG | + | chr1.1:7581681-7581700 | None:intergenic | 25.0% |
| ! | TTTAGTCATTTCATTGATGA+TGG | - | chr1.1:7581852-7581871 | MS.gene33126:CDS | 25.0% |
| ! | TTTGAACACAAAATGTAAGA+AGG | - | chr1.1:7581178-7581197 | MS.gene33126:intron | 25.0% |
| !! | AACTTAAGAAATGCATTTTG+CGG | - | chr1.1:7580707-7580726 | MS.gene33126:intron | 25.0% |
| !! | AGTTATAAAAGATTTGAGAC+AGG | + | chr1.1:7582322-7582341 | None:intergenic | 25.0% |
| !! | CTAAATGAGATCTCATTTTA+TGG | + | chr1.1:7581837-7581856 | None:intergenic | 25.0% |
| !! | CTATTTTGTAAAATTGAGAG+GGG | - | chr1.1:7581577-7581596 | MS.gene33126:intron | 25.0% |
| !! | CTCAATTTTACAAAATAGAC+AGG | + | chr1.1:7581575-7581594 | None:intergenic | 25.0% |
| !! | CTCTGGTTATAATGATTTTA+TGG | - | chr1.1:7582934-7582953 | MS.gene33126:CDS | 25.0% |
| !! | CTGGTTATAATGATTTTATG+GGG | - | chr1.1:7582936-7582955 | MS.gene33126:CDS | 25.0% |
| !! | GTCTATTTTGTAAAATTGAG+AGG | - | chr1.1:7581575-7581594 | MS.gene33126:intron | 25.0% |
| !! | GTTATAAAAGATTTGAGACA+GGG | + | chr1.1:7582321-7582340 | None:intergenic | 25.0% |
| !! | TATGGAAGTACAAACAAATT+TGG | + | chr1.1:7582620-7582639 | None:intergenic | 25.0% |
| !! | TGGAATTTTCAAAAATTGGA+GGG | + | chr1.1:7581905-7581924 | None:intergenic | 25.0% |
| !! | TGGTTGGAATTTTCAAAAAT+TGG | + | chr1.1:7581909-7581928 | None:intergenic | 25.0% |
| !! | TTGGAATTTTCAAAAATTGG+AGG | + | chr1.1:7581906-7581925 | None:intergenic | 25.0% |
| !!! | ACTGATACTTTTCTGTTTTT+TGG | - | chr1.1:7581108-7581127 | MS.gene33126:intron | 25.0% |
| !!! | CTAAAGGTGTTAATTTGTTT+GGG | - | chr1.1:7581239-7581258 | MS.gene33126:CDS | 25.0% |
| !!! | TGATCAATCATTTAGTTTTC+TGG | + | chr1.1:7582976-7582995 | None:intergenic | 25.0% |
| !!! | TTGATTATAATGGTGTTATG+TGG | - | chr1.1:7580126-7580145 | MS.gene33126:intron | 25.0% |
| AAAAACCATAATTGACAGCA+AGG | + | chr1.1:7579710-7579729 | None:intergenic | 30.0% | |
| AAAACCATAATTGACAGCAA+GGG | + | chr1.1:7579709-7579728 | None:intergenic | 30.0% | |
| AAGAATCAATGTAAGCAGAT+AGG | + | chr1.1:7582790-7582809 | None:intergenic | 30.0% | |
| AAGTGAAGTTGAAATTGAGA+AGG | - | chr1.1:7580244-7580263 | MS.gene33126:CDS | 30.0% | |
| AATCACAAAACCTAAGTAAC+AGG | + | chr1.1:7580046-7580065 | None:intergenic | 30.0% | |
| AATGCTTTGGTATGACAATT+TGG | - | chr1.1:7582557-7582576 | MS.gene33126:intron | 30.0% | |
| ACACACATCTTTAATCAGAA+AGG | + | chr1.1:7580396-7580415 | None:intergenic | 30.0% | |
| CAAAAGAGTTACTGTAGTTT+GGG | + | chr1.1:7582490-7582509 | None:intergenic | 30.0% | |
| CAAGTTAGTGACACTTATTT+AGG | - | chr1.1:7582001-7582020 | MS.gene33126:intron | 30.0% | |
| CACAAGCAAATGTCAATATT+TGG | - | chr1.1:7580894-7580913 | MS.gene33126:intron | 30.0% | |
| CCAAACAAATTAACACCTTT+AGG | + | chr1.1:7581241-7581260 | None:intergenic | 30.0% | |
| CCCCAATAGTAACAATTATT+TGG | + | chr1.1:7581929-7581948 | None:intergenic | 30.0% | |
| TCAAAAGAGTTACTGTAGTT+TGG | + | chr1.1:7582491-7582510 | None:intergenic | 30.0% | |
| TTCTTAGTCATCAGAGAAAA+TGG | - | chr1.1:7579855-7579874 | MS.gene33126:intron | 30.0% | |
| TTTACATCAAGACTCAGAAA+AGG | - | chr1.1:7582107-7582126 | MS.gene33126:CDS | 30.0% | |
| TTTGTGAGTTGTGATTGTTT+AGG | - | chr1.1:7580088-7580107 | MS.gene33126:intron | 30.0% | |
| ! | TATTTTGTCATGCAATGCTT+TGG | - | chr1.1:7582544-7582563 | MS.gene33126:intron | 30.0% |
| ! | TCTTAAGTTAGTTTATCGGT+AGG | + | chr1.1:7580696-7580715 | None:intergenic | 30.0% |
| !! | CCTAAAGGTGTTAATTTGTT+TGG | - | chr1.1:7581238-7581257 | MS.gene33126:CDS | 30.0% |
| !! | GTTTTGATATCCTGTTACTT+AGG | - | chr1.1:7580033-7580052 | MS.gene33126:intron | 30.0% |
| !! | TAGCAAGGCATTGTATAAAA+TGG | + | chr1.1:7582461-7582480 | None:intergenic | 30.0% |
| !! | TTCATTGATGATGGTAGTTT+GGG | - | chr1.1:7581861-7581880 | MS.gene33126:CDS | 30.0% |
| !! | TTTCATTGATGATGGTAGTT+TGG | - | chr1.1:7581860-7581879 | MS.gene33126:CDS | 30.0% |
| !! | TTTCCTCTTGTAGTTAGTTT+TGG | - | chr1.1:7582058-7582077 | MS.gene33126:intron | 30.0% |
| !!! | ATACTTTTCTGTTTTTTGGC+AGG | - | chr1.1:7581112-7581131 | MS.gene33126:intron | 30.0% |
| !!! | ATTACTTTTCTAAAACCAGC+TGG | + | chr1.1:7582297-7582316 | None:intergenic | 30.0% |
| !!! | GTTGATGGTGATTTTTTAAC+TGG | - | chr1.1:7580465-7580484 | MS.gene33126:intron | 30.0% |
| !!! | TATGTGGTTTTGTTCTCTAT+AGG | - | chr1.1:7580142-7580161 | MS.gene33126:intron | 30.0% |
| !!! | TTCCTCTTGTAGTTAGTTTT+GGG | - | chr1.1:7582059-7582078 | MS.gene33126:intron | 30.0% |
| AAACCATAATTGACAGCAAG+GGG | + | chr1.1:7579708-7579727 | None:intergenic | 35.0% | |
| AACTATTGTTGAGGAATTCC+TGG | - | chr1.1:7582029-7582048 | MS.gene33126:intron | 35.0% | |
| ACAAAGACATTGAACACGAT+AGG | + | chr1.1:7582880-7582899 | None:intergenic | 35.0% | |
| ACTATTGTTGAGGAATTCCT+GGG | - | chr1.1:7582030-7582049 | MS.gene33126:intron | 35.0% | |
| ACTTGAATACTGAAGCAGAA+AGG | - | chr1.1:7582263-7582282 | MS.gene33126:intron | 35.0% | |
| AGTATCTTCCAAATACTCTG+CGG | - | chr1.1:7581413-7581432 | MS.gene33126:intron | 35.0% | |
| CAAATGTGATAGGATGATGA+TGG | - | chr1.1:7581521-7581540 | MS.gene33126:CDS | 35.0% | |
| CACCATCAACATTCATGTAA+GGG | + | chr1.1:7580455-7580474 | None:intergenic | 35.0% | |
| CAGAAGATTCCTTTACTCAT+AGG | - | chr1.1:7580958-7580977 | MS.gene33126:intron | 35.0% | |
| CTTTGTTAATACGGGTGTTT+AGG | - | chr1.1:7582894-7582913 | MS.gene33126:CDS | 35.0% | |
| GAAACTGTATTGTGTGAGTA+AGG | - | chr1.1:7580181-7580200 | MS.gene33126:CDS | 35.0% | |
| GAAGATACTGCACATTCATA+GGG | + | chr1.1:7581402-7581421 | None:intergenic | 35.0% | |
| GGAATTCCTCAACAATAGTT+AGG | + | chr1.1:7582029-7582048 | None:intergenic | 35.0% | |
| TACAGGTCTTGATGTTGAAA+TGG | - | chr1.1:7580995-7581014 | MS.gene33126:intron | 35.0% | |
| TAGGTTCCTAACTATTGTTG+AGG | - | chr1.1:7582020-7582039 | MS.gene33126:intron | 35.0% | |
| TCACCATCAACATTCATGTA+AGG | + | chr1.1:7580456-7580475 | None:intergenic | 35.0% | |
| TCAGTATTCAAGTCACCAAA+AGG | + | chr1.1:7582256-7582275 | None:intergenic | 35.0% | |
| TTAGGTGAGGAGATAATATC+AGG | - | chr1.1:7582695-7582714 | MS.gene33126:CDS | 35.0% | |
| ! | CCATAAAAGCTGAAGCTTTT+GGG | - | chr1.1:7582635-7582654 | MS.gene33126:intron | 35.0% |
| ! | GAGTAATGATTTTGCTTTGC+AGG | - | chr1.1:7582210-7582229 | MS.gene33126:intron | 35.0% |
| ! | GCACGCAATTAATCATGTTT+TGG | - | chr1.1:7582581-7582600 | MS.gene33126:intron | 35.0% |
| ! | TAAAATGGTCTTACAGCCAA+CGG | + | chr1.1:7582446-7582465 | None:intergenic | 35.0% |
| ! | TATAGGTTGAAATCCAAGTG+AGG | - | chr1.1:7580159-7580178 | MS.gene33126:CDS | 35.0% |
| ! | TATCCACATGCCTGAATTTT+TGG | - | chr1.1:7582727-7582746 | MS.gene33126:CDS | 35.0% |
| ! | TCCATAAAAGCTGAAGCTTT+TGG | - | chr1.1:7582634-7582653 | MS.gene33126:intron | 35.0% |
| ! | TCTTTTGATGTCTTCATTCG+AGG | - | chr1.1:7582503-7582522 | MS.gene33126:intron | 35.0% |
| ! | TTTGCGTTTGAAATTGTCGA+GGG | - | chr1.1:7581071-7581090 | MS.gene33126:intron | 35.0% |
| ! | TTTTGTAAAATTGAGAGGGG+TGG | - | chr1.1:7581580-7581599 | MS.gene33126:intron | 35.0% |
| !! | CTGCTTACATTGATTCTTTC+AGG | - | chr1.1:7582792-7582811 | MS.gene33126:CDS | 35.0% |
| !! | TCATTGATGATGGTAGTTTG+GGG | - | chr1.1:7581862-7581881 | MS.gene33126:CDS | 35.0% |
| !! | TGGAAAATTCCTTGATTTGC+TGG | + | chr1.1:7580565-7580584 | None:intergenic | 35.0% |
| !! | TTTGTTTCTGATGACAGTGT+CGG | + | chr1.1:7579579-7579598 | None:intergenic | 35.0% |
| !!! | TGTAGTTAGTTTTGGGAGTT+TGG | - | chr1.1:7582066-7582085 | MS.gene33126:intron | 35.0% |
| !!! | TTCTGTTTTTTGGCAGGTTA+TGG | - | chr1.1:7581118-7581137 | MS.gene33126:intron | 35.0% |
| AACCATAATTGACAGCAAGG+GGG | + | chr1.1:7579707-7579726 | None:intergenic | 40.0% | |
| ACTGAAGCAGAAAGGAAACT+AGG | - | chr1.1:7582271-7582290 | MS.gene33126:intron | 40.0% | |
| ATCAAAACCAACCTGTTGTG+AGG | + | chr1.1:7580021-7580040 | None:intergenic | 40.0% | |
| ATTAAACGGCAGAGTAGGAA+TGG | + | chr1.1:7580207-7580226 | None:intergenic | 40.0% | |
| CAACATCGACAATAGACTCA+CGG | + | chr1.1:7579959-7579978 | None:intergenic | 40.0% | |
| CACAATACAGTTTCCTCACT+TGG | + | chr1.1:7580175-7580194 | None:intergenic | 40.0% | |
| CAGAGTTCTATATCCTTCAC+CGG | - | chr1.1:7582417-7582436 | MS.gene33126:CDS | 40.0% | |
| CAGCACCAATCTCAAAAACA+CGG | + | chr1.1:7580929-7580948 | None:intergenic | 40.0% | |
| CTACAATCAAGATGAGAGTG+TGG | - | chr1.1:7580328-7580347 | MS.gene33126:intron | 40.0% | |
| CTAGATCCAGCAATCAACTT+AGG | + | chr1.1:7580801-7580820 | None:intergenic | 40.0% | |
| CTATTGTTGAGGAATTCCTG+GGG | - | chr1.1:7582031-7582050 | MS.gene33126:intron | 40.0% | |
| CTCCCAAAACTAACTACAAG+AGG | + | chr1.1:7582064-7582083 | None:intergenic | 40.0% | |
| CTCCCTTACATGAATGTTGA+TGG | - | chr1.1:7580450-7580469 | MS.gene33126:intron | 40.0% | |
| CTTCCAAAAATTCAGGCATG+TGG | + | chr1.1:7582733-7582752 | None:intergenic | 40.0% | |
| GAAAATGTACTTGGGTAGAC+AGG | - | chr1.1:7581781-7581800 | MS.gene33126:CDS | 40.0% | |
| GACAGGGATAAAAGACGTAA+AGG | + | chr1.1:7581558-7581577 | None:intergenic | 40.0% | |
| GACATTTGCTTGTGAAGTTG+AGG | + | chr1.1:7580888-7580907 | None:intergenic | 40.0% | |
| GAGTCTATTGTCGATGTTGA+AGG | - | chr1.1:7579960-7579979 | MS.gene33126:CDS | 40.0% | |
| GCACGTTCTTCCAAAAATTC+AGG | + | chr1.1:7582740-7582759 | None:intergenic | 40.0% | |
| GCAGCATCCTCGATATTAAA+CGG | + | chr1.1:7580221-7580240 | None:intergenic | 40.0% | |
| GGAAGATACTGCACATTCAT+AGG | + | chr1.1:7581403-7581422 | None:intergenic | 40.0% | |
| TACAAGAGGAAAAATACCCC+AGG | + | chr1.1:7582050-7582069 | None:intergenic | 40.0% | |
| TATTGTCGATGTTGAAGGTG+TGG | - | chr1.1:7579965-7579984 | MS.gene33126:intron | 40.0% | |
| TCGATATTAAACGGCAGAGT+AGG | + | chr1.1:7580212-7580231 | None:intergenic | 40.0% | |
| TCTTTAGGCTGGACTACAAA+GGG | - | chr1.1:7580838-7580857 | MS.gene33126:intron | 40.0% | |
| TGAAATTGAGAAGGCCATTC+AGG | - | chr1.1:7580253-7580272 | MS.gene33126:CDS | 40.0% | |
| TTACAGTTCCAACTTGAGAC+TGG | + | chr1.1:7580591-7580610 | None:intergenic | 40.0% | |
| TTGATTGCTGGATCTAGTGA+GGG | - | chr1.1:7580804-7580823 | MS.gene33126:intron | 40.0% | |
| ! | AAAATGGTCTTACAGCCAAC+GGG | + | chr1.1:7582445-7582464 | None:intergenic | 40.0% |
| ! | AACACCTTTAGGGGTTCAAA+CGG | + | chr1.1:7581230-7581249 | None:intergenic | 40.0% |
| ! | ACAACTTGTTCGTGTGAATC+AGG | - | chr1.1:7580501-7580520 | MS.gene33126:intron | 40.0% |
| ! | ATGCATTTTGCGGTGTGATA+CGG | - | chr1.1:7580717-7580736 | MS.gene33126:intron | 40.0% |
| ! | CCCAAAAGCTTCAGCTTTTA+TGG | + | chr1.1:7582638-7582657 | None:intergenic | 40.0% |
| ! | CTATGCAATCCTTGTTGCTT+AGG | - | chr1.1:7582677-7582696 | MS.gene33126:CDS | 40.0% |
| ! | GATTTTGCTTTGCAGGAAGT+TGG | - | chr1.1:7582217-7582236 | MS.gene33126:intron | 40.0% |
| ! | GGAGTAGAGATTGAACCTTT+TGG | - | chr1.1:7582238-7582257 | MS.gene33126:intron | 40.0% |
| ! | GTTGCTGCTTGTAAGTTTGT+TGG | - | chr1.1:7580662-7580681 | MS.gene33126:intron | 40.0% |
| ! | GTTTGCGTTTGAAATTGTCG+AGG | - | chr1.1:7581070-7581089 | MS.gene33126:intron | 40.0% |
| ! | TACTCTGCCGTTTAATATCG+AGG | - | chr1.1:7580211-7580230 | MS.gene33126:CDS | 40.0% |
| ! | TATGTAAGCCGCAGAGTATT+TGG | + | chr1.1:7581424-7581443 | None:intergenic | 40.0% |
| ! | TGTTGTGAGGCACCTTTAAT+AGG | + | chr1.1:7580008-7580027 | None:intergenic | 40.0% |
| !! | AGAAGGTATTCAGATGCTCA+AGG | - | chr1.1:7581447-7581466 | MS.gene33126:CDS | 40.0% |
| !! | ATGTGATAGGATGATGATGG+CGG | - | chr1.1:7581524-7581543 | MS.gene33126:CDS | 40.0% |
| !! | TAGTTTGGGTTGTCATAGCA+AGG | + | chr1.1:7582476-7582495 | None:intergenic | 40.0% |
| !! | TATTAAAGGTGCCTCACAAC+AGG | - | chr1.1:7580007-7580026 | MS.gene33126:intron | 40.0% |
| !! | TGGAAGTTTAAGCACTGGTA+GGG | - | chr1.1:7581600-7581619 | MS.gene33126:intron | 40.0% |
| !!! | ATTTTTTAACTGGTGCAGGC+TGG | - | chr1.1:7580475-7580494 | MS.gene33126:intron | 40.0% |
| !!! | GGTGATTTTTTAACTGGTGC+AGG | - | chr1.1:7580471-7580490 | MS.gene33126:intron | 40.0% |
| AAGCAAAAAGGCCTCCAAGA+AGG | - | chr1.1:7579599-7579618 | MS.gene33126:CDS | 45.0% | |
| AATGCCATCTTCTTCCCAAC+TGG | + | chr1.1:7579837-7579856 | None:intergenic | 45.0% | |
| AGATATGGTGTACCACCACA+CGG | - | chr1.1:7583001-7583020 | MS.gene33126:CDS | 45.0% | |
| ATAACCAGAGCTCAGCAAGA+GGG | + | chr1.1:7582924-7582943 | None:intergenic | 45.0% | |
| ATCTCCTCACCTAAGCAACA+AGG | + | chr1.1:7582689-7582708 | None:intergenic | 45.0% | |
| ATCTGCGGACTCACTAAATC+AGG | + | chr1.1:7579912-7579931 | None:intergenic | 45.0% | |
| ATTCCAGCCGCTCCTATTAA+AGG | - | chr1.1:7579993-7580012 | MS.gene33126:intron | 45.0% | |
| CACAAGCTATTCGACCAGTT+GGG | - | chr1.1:7579820-7579839 | MS.gene33126:intron | 45.0% | |
| CAGCAATCAACTTAGGAGTG+TGG | + | chr1.1:7580794-7580813 | None:intergenic | 45.0% | |
| CATGTAAGGGAGACAAGTTC+CGG | + | chr1.1:7580442-7580461 | None:intergenic | 45.0% | |
| CGATTCACTACAGAACAAGC+CGG | - | chr1.1:7579779-7579798 | MS.gene33126:intron | 45.0% | |
| CGTGTAGTAATGCTCTTCTG+TGG | - | chr1.1:7583046-7583065 | MS.gene33126:CDS | 45.0% | |
| CTGCGGCTTACATATGAAGA+AGG | - | chr1.1:7581430-7581449 | MS.gene33126:intron | 45.0% | |
| GCACAGATGCCTATGAGTAA+AGG | + | chr1.1:7580970-7580989 | None:intergenic | 45.0% | |
| GTCTTTAGGCTGGACTACAA+AGG | - | chr1.1:7580837-7580856 | MS.gene33126:intron | 45.0% | |
| GTTGATTGCTGGATCTAGTG+AGG | - | chr1.1:7580803-7580822 | MS.gene33126:intron | 45.0% | |
| TAAGAAGGATCTCGAAGCTG+TGG | - | chr1.1:7581193-7581212 | MS.gene33126:intron | 45.0% | |
| TATAACCAGAGCTCAGCAAG+AGG | + | chr1.1:7582925-7582944 | None:intergenic | 45.0% | |
| TCATTACTCGCTGCAAGACA+AGG | + | chr1.1:7582199-7582218 | None:intergenic | 45.0% | |
| TGATTTAGTGAGTCCGCAGA+TGG | - | chr1.1:7579911-7579930 | MS.gene33126:CDS | 45.0% | |
| TTCCAACTTGAGACTGGATG+TGG | + | chr1.1:7580585-7580604 | None:intergenic | 45.0% | |
| TTCCACATCCAGTCTCAAGT+TGG | - | chr1.1:7580580-7580599 | MS.gene33126:intron | 45.0% | |
| TTTAATAGGAGCGGCTGGAA+TGG | + | chr1.1:7579994-7580013 | None:intergenic | 45.0% | |
| ! | ACACCTTTAGGGGTTCAAAC+GGG | + | chr1.1:7581229-7581248 | None:intergenic | 45.0% |
| ! | CAATCCTTGTTGCTTAGGTG+AGG | - | chr1.1:7582682-7582701 | MS.gene33126:CDS | 45.0% |
| ! | TGAGGCACCTTTAATAGGAG+CGG | + | chr1.1:7580003-7580022 | None:intergenic | 45.0% |
| !! | CACACTCCTAAGTTGATTGC+TGG | - | chr1.1:7580792-7580811 | MS.gene33126:intron | 45.0% |
| !! | GTGGAAGTTTAAGCACTGGT+AGG | - | chr1.1:7581599-7581618 | MS.gene33126:intron | 45.0% |
| !!! | CTTCGCCGTGTTTTTGAGAT+TGG | - | chr1.1:7580921-7580940 | MS.gene33126:intron | 45.0% |
| AATAGACTCACGGCTGAGAG+CGG | + | chr1.1:7579949-7579968 | None:intergenic | 50.0% | |
| AATCGTTGAGAGCCTCGACT+TGG | + | chr1.1:7579764-7579783 | None:intergenic | 50.0% | |
| AGAAAGGAAACTAGGCCAGC+TGG | - | chr1.1:7582279-7582298 | MS.gene33126:intron | 50.0% | |
| AGAGAGAGTCGATGTAGCAG+AGG | + | chr1.1:7579673-7579692 | None:intergenic | 50.0% | |
| AGGCATCTGTGCGAGTTTAC+AGG | - | chr1.1:7580978-7580997 | MS.gene33126:intron | 50.0% | |
| AGGGGTGGAAGTTTAAGCAC+TGG | - | chr1.1:7581595-7581614 | MS.gene33126:intron | 50.0% | |
| ATCGTTGAGAGCCTCGACTT+GGG | + | chr1.1:7579763-7579782 | None:intergenic | 50.0% | |
| ATTGCTGGATCTAGTGAGGG+TGG | - | chr1.1:7580807-7580826 | MS.gene33126:intron | 50.0% | |
| CAAGAAGGAACTCGCAAAGC+TGG | - | chr1.1:7579614-7579633 | MS.gene33126:CDS | 50.0% | |
| CAGCTTTGCGAGTTCCTTCT+TGG | + | chr1.1:7579616-7579635 | None:intergenic | 50.0% | |
| CTGCGAACACCAGCAAATCA+AGG | - | chr1.1:7580553-7580572 | MS.gene33126:intron | 50.0% | |
| CTTTGCGAGTTCCTTCTTGG+AGG | + | chr1.1:7579613-7579632 | None:intergenic | 50.0% | |
| GAAGAACGTGCACAAGCTTG+CGG | - | chr1.1:7582749-7582768 | MS.gene33126:CDS | 50.0% | |
| GCACAAGCTATTCGACCAGT+TGG | - | chr1.1:7579819-7579838 | MS.gene33126:intron | 50.0% | |
| GCGGCAAATTTCACCATCTG+CGG | + | chr1.1:7579927-7579946 | None:intergenic | 50.0% | |
| GTACCCGTTTGAACCCCTAA+AGG | - | chr1.1:7581223-7581242 | MS.gene33126:CDS | 50.0% | |
| TAACCAGAGCTCAGCAAGAG+GGG | + | chr1.1:7582923-7582942 | None:intergenic | 50.0% | |
| TCATTGAGCTCCCTAACGAC+TGG | - | chr1.1:7579736-7579755 | MS.gene33126:intron | 50.0% | |
| TCGACCAGTTGGGAAGAAGA+TGG | - | chr1.1:7579830-7579849 | MS.gene33126:intron | 50.0% | |
| TCGTTAGGGAGCTCAATGAG+CGG | + | chr1.1:7579735-7579754 | None:intergenic | 50.0% | |
| TGGTTTCACCGTACAGTGCT+TGG | - | chr1.1:7579875-7579894 | MS.gene33126:CDS | 50.0% | |
| TTGCGGTGTGATACGGTGTT+GGG | - | chr1.1:7580724-7580743 | MS.gene33126:intron | 50.0% | |
| TTTGCGGTGTGATACGGTGT+TGG | - | chr1.1:7580723-7580742 | MS.gene33126:intron | 50.0% | |
| ! | AACAAGCCGGTTCTAATCCG+TGG | - | chr1.1:7579792-7579811 | MS.gene33126:intron | 50.0% |
| ! | ACAAGCCGGTTCTAATCCGT+GGG | - | chr1.1:7579793-7579812 | MS.gene33126:intron | 50.0% |
| ! | GACCCCCTTGCTGTCAATTA+TGG | - | chr1.1:7579702-7579721 | MS.gene33126:intron | 50.0% |
| ! | TGCCTGAACCAAGCACTGTA+CGG | + | chr1.1:7579886-7579905 | None:intergenic | 50.0% |
| ! | TTTTTCCACGTGACCCACTC+AGG | - | chr1.1:7583095-7583114 | MS.gene33126:CDS | 50.0% |
| !! | AAAGGTGCCTCACAACAGGT+TGG | - | chr1.1:7580011-7580030 | MS.gene33126:intron | 50.0% |
| !! | CTTGATTTGCTGGTGTTCGC+AGG | + | chr1.1:7580555-7580574 | None:intergenic | 50.0% |
| AGGGTGGAGCTGCTGTCTTT+AGG | - | chr1.1:7580823-7580842 | MS.gene33126:intron | 55.0% | |
| AGTCGATGTAGCAGAGGTGG+CGG | + | chr1.1:7579667-7579686 | None:intergenic | 55.0% | |
| CAAAGGGAAACCTGCATGCC+TGG | - | chr1.1:7580854-7580873 | MS.gene33126:intron | 55.0% | |
| CACCGTACAGTGCTTGGTTC+AGG | - | chr1.1:7579881-7579900 | MS.gene33126:CDS | 55.0% | |
| CGTTAGGGAGCTCAATGAGC+GGG | + | chr1.1:7579734-7579753 | None:intergenic | 55.0% | |
| GAAGTTGAGGTGACTGAGCC+AGG | + | chr1.1:7580875-7580894 | None:intergenic | 55.0% | |
| GAGAGTCGATGTAGCAGAGG+TGG | + | chr1.1:7579670-7579689 | None:intergenic | 55.0% | |
| GCACCTTTAATAGGAGCGGC+TGG | + | chr1.1:7579999-7580018 | None:intergenic | 55.0% | |
| GTCTTACAGCCAACGGGTAC+CGG | + | chr1.1:7582439-7582458 | None:intergenic | 55.0% | |
| TAACGACTGGACCCAAGTCG+AGG | - | chr1.1:7579749-7579768 | MS.gene33126:intron | 55.0% | |
| TATCCTTCACCGGTACCCGT+TGG | - | chr1.1:7582427-7582446 | MS.gene33126:CDS | 55.0% | |
| TATGGTGTACCACCACACGG+TGG | - | chr1.1:7583004-7583023 | MS.gene33126:CDS | 55.0% | |
| TGCACAAGCTTGCGGCATTG+AGG | - | chr1.1:7582757-7582776 | MS.gene33126:CDS | 55.0% | |
| TGGAGCTGCTGTCTTTAGGC+TGG | - | chr1.1:7580827-7580846 | MS.gene33126:intron | 55.0% | |
| ! | CGACTTGGGTCCAGTCGTTA+GGG | + | chr1.1:7579749-7579768 | None:intergenic | 55.0% |
| ! | GAATAGCTTGTGCCCTCCCA+CGG | + | chr1.1:7579812-7579831 | None:intergenic | 55.0% |
| ! | GGTGTGATACGGTGTTGGGT+AGG | - | chr1.1:7580728-7580747 | MS.gene33126:intron | 55.0% |
| !! | TCGACTTGGGTCCAGTCGTT+AGG | + | chr1.1:7579750-7579769 | None:intergenic | 55.0% |
| ACTCCAAAGCCACCGTGTGG+TGG | + | chr1.1:7583016-7583035 | None:intergenic | 60.0% | |
| CCTACTCCAAAGCCACCGTG+TGG | + | chr1.1:7583019-7583038 | None:intergenic | 60.0% | |
| GCAATCCTGAGTGGGTCACG+TGG | + | chr1.1:7583103-7583122 | None:intergenic | 60.0% | |
| GTACCACCACACGGTGGCTT+TGG | - | chr1.1:7583010-7583029 | MS.gene33126:CDS | 60.0% | |
| ! | AGCCGGTTCTAATCCGTGGG+AGG | - | chr1.1:7579796-7579815 | MS.gene33126:intron | 60.0% |
| ! | GCCGGTTCTAATCCGTGGGA+GGG | - | chr1.1:7579797-7579816 | MS.gene33126:intron | 60.0% |
| !! | CCACACGGTGGCTTTGGAGT+AGG | - | chr1.1:7583016-7583035 | MS.gene33126:CDS | 60.0% |
| !! | CGGTGGCTTTGGAGTAGGCT+TGG | - | chr1.1:7583021-7583040 | MS.gene33126:CDS | 60.0% |
| !! | GCCCTCCCACGGATTAGAAC+CGG | + | chr1.1:7579801-7579820 | None:intergenic | 60.0% |
| AGACTCACGGCTGAGAGCGG+CGG | + | chr1.1:7579946-7579965 | None:intergenic | 65.0% | |
| CTGCCCCTCTTGCTGAGCTC+TGG | - | chr1.1:7582917-7582936 | MS.gene33126:CDS | 65.0% | |
| GGTGACTGAGCCAGGCATGC+AGG | + | chr1.1:7580867-7580886 | None:intergenic | 65.0% | |
| ! | AGGTGGCGGCGGCAACTTCT+CGG | + | chr1.1:7579653-7579672 | None:intergenic | 65.0% |
| ! | CGATGTAGCAGAGGTGGCGG+CGG | + | chr1.1:7579664-7579683 | None:intergenic | 65.0% |
| !! | CAGCCAACGGGTACCGGTGA+AGG | + | chr1.1:7582433-7582452 | None:intergenic | 65.0% |
| TGGCGGCGGCAACTTCTCGG+CGG | + | chr1.1:7579650-7579669 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 7579552 | 7583129 | 7579552 | ID=MS.gene33126 |
| chr1.1 | mRNA | 7579552 | 7583129 | 7579552 | ID=MS.gene33126.t1;Parent=MS.gene33126 |
| chr1.1 | exon | 7582653 | 7583129 | 7582653 | ID=MS.gene33126.t1.exon1;Parent=MS.gene33126.t1 |
| chr1.1 | CDS | 7582653 | 7583129 | 7582653 | ID=cds.MS.gene33126.t1;Parent=MS.gene33126.t1 |
| chr1.1 | exon | 7582407 | 7582517 | 7582407 | ID=MS.gene33126.t1.exon2;Parent=MS.gene33126.t1 |
| chr1.1 | CDS | 7582407 | 7582517 | 7582407 | ID=cds.MS.gene33126.t1;Parent=MS.gene33126.t1 |
| chr1.1 | exon | 7582075 | 7582188 | 7582075 | ID=MS.gene33126.t1.exon3;Parent=MS.gene33126.t1 |
| chr1.1 | CDS | 7582075 | 7582188 | 7582075 | ID=cds.MS.gene33126.t1;Parent=MS.gene33126.t1 |
| chr1.1 | exon | 7581641 | 7581931 | 7581641 | ID=MS.gene33126.t1.exon4;Parent=MS.gene33126.t1 |
| chr1.1 | CDS | 7581641 | 7581931 | 7581641 | ID=cds.MS.gene33126.t1;Parent=MS.gene33126.t1 |
| chr1.1 | exon | 7581437 | 7581547 | 7581437 | ID=MS.gene33126.t1.exon5;Parent=MS.gene33126.t1 |
| chr1.1 | CDS | 7581437 | 7581547 | 7581437 | ID=cds.MS.gene33126.t1;Parent=MS.gene33126.t1 |
| chr1.1 | exon | 7581213 | 7581266 | 7581213 | ID=MS.gene33126.t1.exon6;Parent=MS.gene33126.t1 |
| chr1.1 | CDS | 7581213 | 7581266 | 7581213 | ID=cds.MS.gene33126.t1;Parent=MS.gene33126.t1 |
| chr1.1 | exon | 7580370 | 7580449 | 7580370 | ID=MS.gene33126.t1.exon7;Parent=MS.gene33126.t1 |
| chr1.1 | CDS | 7580370 | 7580449 | 7580370 | ID=cds.MS.gene33126.t1;Parent=MS.gene33126.t1 |
| chr1.1 | exon | 7580157 | 7580272 | 7580157 | ID=MS.gene33126.t1.exon8;Parent=MS.gene33126.t1 |
| chr1.1 | CDS | 7580157 | 7580272 | 7580157 | ID=cds.MS.gene33126.t1;Parent=MS.gene33126.t1 |
| chr1.1 | exon | 7579868 | 7579982 | 7579868 | ID=MS.gene33126.t1.exon9;Parent=MS.gene33126.t1 |
| chr1.1 | CDS | 7579868 | 7579982 | 7579868 | ID=cds.MS.gene33126.t1;Parent=MS.gene33126.t1 |
| chr1.1 | exon | 7579552 | 7579678 | 7579552 | ID=MS.gene33126.t1.exon10;Parent=MS.gene33126.t1 |
| chr1.1 | CDS | 7579552 | 7579678 | 7579552 | ID=cds.MS.gene33126.t1;Parent=MS.gene33126.t1 |
| Gene Sequence |
| Protein sequence |
