Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98468.t1 | AES95696.1 | 84.7 | 543 | 64 | 3 | 1 | 539 | 62 | 589 | 1.50E-256 | 895.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98468.t1 | Q9M084 | 64.3 | 498 | 168 | 2 | 52 | 539 | 61 | 558 | 8.5e-184 | 644.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98468.t1 | G7KAW8 | 84.7 | 543 | 64 | 3 | 1 | 539 | 62 | 589 | 1.1e-256 | 895.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98468.t1 | MTR_5g028360 | 88.398 | 543 | 44 | 3 | 1 | 539 | 62 | 589 | 0.0 | 972 |
| MS.gene98468.t1 | MTR_1g014140 | 74.122 | 541 | 138 | 1 | 1 | 539 | 1 | 541 | 0.0 | 818 |
| MS.gene98468.t1 | MTR_4g100920 | 25.145 | 517 | 295 | 19 | 65 | 534 | 70 | 541 | 8.52e-33 | 132 |
| MS.gene98468.t1 | MTR_8g102050 | 30.605 | 281 | 175 | 8 | 269 | 536 | 275 | 548 | 7.40e-27 | 114 |
| MS.gene98468.t1 | MTR_7g101050 | 31.970 | 269 | 163 | 10 | 282 | 536 | 311 | 573 | 6.61e-26 | 112 |
| MS.gene98468.t1 | MTR_2g036600 | 22.245 | 481 | 321 | 16 | 91 | 531 | 121 | 588 | 2.00e-14 | 76.6 |
| MS.gene98468.t1 | MTR_4g127790 | 23.464 | 358 | 236 | 12 | 207 | 530 | 32 | 385 | 6.24e-12 | 67.8 |
| MS.gene98468.t1 | MTR_4g052070 | 26.295 | 251 | 162 | 8 | 88 | 331 | 70 | 304 | 2.35e-11 | 67.0 |
| MS.gene98468.t1 | MTR_8g104740 | 27.857 | 280 | 173 | 12 | 61 | 331 | 57 | 316 | 5.65e-11 | 65.5 |
| MS.gene98468.t1 | MTR_8g104740 | 27.857 | 280 | 173 | 12 | 61 | 331 | 57 | 316 | 7.38e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98468.t1 | AT4G31180 | 63.056 | 517 | 181 | 2 | 33 | 539 | 42 | 558 | 0.0 | 675 |
| MS.gene98468.t1 | AT4G31180 | 63.056 | 517 | 181 | 2 | 33 | 539 | 42 | 558 | 0.0 | 675 |
| MS.gene98468.t1 | AT4G26870 | 61.822 | 516 | 191 | 4 | 25 | 539 | 22 | 532 | 0.0 | 646 |
| MS.gene98468.t1 | AT4G17300 | 25.352 | 497 | 283 | 16 | 86 | 534 | 106 | 562 | 1.50e-30 | 125 |
| MS.gene98468.t1 | AT4G17300 | 25.352 | 497 | 283 | 16 | 86 | 534 | 126 | 582 | 1.61e-30 | 126 |
| MS.gene98468.t1 | AT5G56680 | 29.603 | 277 | 175 | 8 | 273 | 536 | 300 | 569 | 8.06e-28 | 117 |
| MS.gene98468.t1 | AT1G70980 | 29.710 | 276 | 172 | 8 | 276 | 536 | 300 | 568 | 1.38e-25 | 111 |
| MS.gene98468.t1 | AT3G07420 | 23.792 | 269 | 191 | 8 | 273 | 532 | 368 | 631 | 2.23e-11 | 67.0 |
Find 121 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGATACTTCTTACATTTC+TGG | 0.087614 | 5.4:-18981434 | None:intergenic |
| CTTATTACATTGATGCTTTC+AGG | 0.115749 | 5.4:+18982842 | MS.gene98468:CDS |
| CACACTCCAAAGTTGATTAA+TGG | 0.180357 | 5.4:+18981043 | MS.gene98468:CDS |
| TTCTAGAAGCATCCTCTATT+TGG | 0.181059 | 5.4:-18980429 | None:intergenic |
| GCACGTTCTTCTAACAATTT+TGG | 0.230009 | 5.4:-18982787 | None:intergenic |
| GACCCCTTAGCCACCAATTA+TGG | 0.254007 | 5.4:+18979902 | MS.gene98468:CDS |
| ATTCCGGCTACTCCTATTAA+AGG | 0.274375 | 5.4:+18980214 | MS.gene98468:CDS |
| TATTTCCACGTGACCCAAAA+AGG | 0.306266 | 5.4:+18983103 | MS.gene98468:CDS |
| TAATGGGATGTTGCCATAAT+TGG | 0.313034 | 5.4:-18979915 | None:intergenic |
| AGGCATCTGTGTGAGTTTAC+TGG | 0.353312 | 5.4:+18981229 | MS.gene98468:CDS |
| TTAGGTGAGGAGATAATTTC+AGG | 0.358661 | 5.4:+18982745 | MS.gene98468:intron |
| AAGTGCTTTGACCTGGGTCC+GGG | 0.362290 | 5.4:-18979975 | None:intergenic |
| TTGGATTGGAGCTCCTCTAA+TGG | 0.364039 | 5.4:-18979932 | None:intergenic |
| TGCTGAGTGGTGCCTTTAAT+AGG | 0.368885 | 5.4:-18980226 | None:intergenic |
| CAAGTGCTTTGACCTGGGTC+CGG | 0.371135 | 5.4:-18979976 | None:intergenic |
| CGGAAAATTCCTTGATTAGC+TGG | 0.377962 | 5.4:-18980759 | None:intergenic |
| GACGGGATGGACCGGTGTCT+TGG | 0.378797 | 5.4:-18979951 | None:intergenic |
| TGGTGGCTTTGGCGCAGGCT+TGG | 0.380508 | 5.4:+18983029 | MS.gene98468:CDS |
| TCATGGCGTTGTTTCCATTC+CGG | 0.380729 | 5.4:+18980198 | MS.gene98468:CDS |
| ATCTGCTCACTCACTGAATC+AGG | 0.382002 | 5.4:-18980130 | None:intergenic |
| ACCGATACCCTTTGGCCATA+AGG | 0.383226 | 5.4:+18982478 | MS.gene98468:CDS |
| GCACCACTGCATGGTGGCTT+TGG | 0.390476 | 5.4:+18983018 | MS.gene98468:CDS |
| CTAGATCCATTAATCAACTT+TGG | 0.392041 | 5.4:-18981049 | None:intergenic |
| ACAACTTGTTCGTGTGAATC+AGG | 0.394922 | 5.4:+18980698 | MS.gene98468:CDS |
| CTCTATTTGGAAGGGTAAAA+CGG | 0.398471 | 5.4:-18980416 | None:intergenic |
| TGGTGCAGGCTCTTTGCACT+CGG | 0.398760 | 5.4:-18979759 | None:intergenic |
| CAAAGGGCATCCTGCATGCC+TGG | 0.401678 | 5.4:+18981105 | MS.gene98468:CDS |
| CTGCATGGTGGCTTTGGCGC+AGG | 0.403327 | 5.4:+18983024 | MS.gene98468:CDS |
| GAGTCTGTGGTGGACGTTCA+TGG | 0.408170 | 5.4:+18980181 | MS.gene98468:CDS |
| AGCATCAATGTAATAAGATA+TGG | 0.416066 | 5.4:-18982836 | None:intergenic |
| TATCCTTCACCGATACCCTT+TGG | 0.424104 | 5.4:+18982470 | MS.gene98468:CDS |
| TTATGGCAACATCCCATTAG+AGG | 0.429972 | 5.4:+18979919 | MS.gene98468:CDS |
| TGGATTGGAGCTCCTCTAAT+GGG | 0.435677 | 5.4:-18979931 | None:intergenic |
| CGGCCATTTGTTGCCGATGT+CGG | 0.439008 | 5.4:-18979844 | None:intergenic |
| CATTGTATAGAACGGCCTTA+TGG | 0.447659 | 5.4:-18982493 | None:intergenic |
| GACGATGATGGTGCTGGTGC+AGG | 0.454321 | 5.4:-18979773 | None:intergenic |
| GGAGTAGAAATTGAGCCTTT+TGG | 0.454350 | 5.4:+18982285 | MS.gene98468:CDS |
| TGAATATGACAGGGCCAGTC+AGG | 0.454741 | 5.4:+18980459 | MS.gene98468:CDS |
| TCTATTTGGAAGGGTAAAAC+GGG | 0.465770 | 5.4:-18980415 | None:intergenic |
| GATGGACCGGTGTCTTGGAT+TGG | 0.465944 | 5.4:-18979946 | None:intergenic |
| GTGAATTGAAATGAAGTCTT+CGG | 0.483974 | 5.4:-18981023 | None:intergenic |
| TATTAAAGGCACCACTCAGC+AGG | 0.490348 | 5.4:+18980228 | MS.gene98468:CDS |
| CTAAATTGTATTGTGTGAGT+AGG | 0.490707 | 5.4:+18980386 | MS.gene98468:CDS |
| AGTGCTTTGACCTGGGTCCG+GGG | 0.493434 | 5.4:-18979974 | None:intergenic |
| GCTCCGACATCGGCAACAAA+TGG | 0.503015 | 5.4:+18979841 | MS.gene98468:CDS |
| TTGCCATAATTGGTGGCTAA+GGG | 0.506950 | 5.4:-18979905 | None:intergenic |
| GTACCTTTAGCGGTTCGAAT+GGG | 0.507990 | 5.4:-18981476 | None:intergenic |
| AATAATTCAGTTAGAATTCG+AGG | 0.508512 | 5.4:+18980013 | MS.gene98468:CDS |
| ATGTCGGAGCTTTACCAGCT+TGG | 0.509633 | 5.4:-18979828 | None:intergenic |
| ACCTCAACTTCACAAGCAAA+TGG | 0.513847 | 5.4:+18981135 | MS.gene98468:CDS |
| GAAGTGAAGCTGAATATGAC+AGG | 0.516656 | 5.4:+18980449 | MS.gene98468:CDS |
| AATCGTCAAGTGCTTTGACC+TGG | 0.518195 | 5.4:-18979982 | None:intergenic |
| GCGCCAAAGCCACCATGCAG+TGG | 0.521064 | 5.4:-18983021 | None:intergenic |
| GATTGACTGCCACTATTTCG+AGG | 0.521814 | 5.4:+18981270 | MS.gene98468:CDS |
| ATCGTCAAGTGCTTTGACCT+GGG | 0.521979 | 5.4:-18979981 | None:intergenic |
| CTTCAACATTATCCGCAATA+CGG | 0.524897 | 5.4:-18980779 | None:intergenic |
| AGTACCTTTAGCGGTTCGAA+TGG | 0.527085 | 5.4:-18981477 | None:intergenic |
| CACCGGTCCATCCCGTCCCC+CGG | 0.527914 | 5.4:+18979957 | MS.gene98468:CDS |
| TCGGAGCTTTACCAGCTTGG+CGG | 0.531299 | 5.4:-18979825 | None:intergenic |
| TTGCAAACACCAGCTAATCA+AGG | 0.532269 | 5.4:+18980750 | MS.gene98468:CDS |
| AACGCCATCTTCTTACTCAC+TGG | 0.532690 | 5.4:-18980055 | None:intergenic |
| GCCTTATGGCCAAAGGGTAT+CGG | 0.533082 | 5.4:-18982479 | None:intergenic |
| TCAGTATTCAAGTCACCAAA+AGG | 0.536741 | 5.4:-18982300 | None:intergenic |
| GTTGCCATAATTGGTGGCTA+AGG | 0.537422 | 5.4:-18979906 | None:intergenic |
| GAAGTTGAGGTGACTGAGCC+AGG | 0.538658 | 5.4:-18981123 | None:intergenic |
| ACAGATATACCTCGAAATAG+TGG | 0.539941 | 5.4:-18981279 | None:intergenic |
| CAGAGGATTCCTTTACTCAC+AGG | 0.542220 | 5.4:+18981209 | MS.gene98468:CDS |
| GGTGCAGGCTCTTTGCACTC+GGG | 0.544258 | 5.4:-18979758 | None:intergenic |
| ACACAGATGCCTGTGAGTAA+AGG | 0.545161 | 5.4:-18981218 | None:intergenic |
| GCCATTTGCTTGTGAAGTTG+AGG | 0.546111 | 5.4:-18981136 | None:intergenic |
| AGAAGCATCCTCTATTTGGA+AGG | 0.546640 | 5.4:-18980425 | None:intergenic |
| TAAATTGTATTGTGTGAGTA+GGG | 0.550079 | 5.4:+18980387 | MS.gene98468:CDS |
| CTGCGGCTTACATACGAAGA+AGG | 0.554330 | 5.4:+18981732 | MS.gene98468:CDS |
| CAAAGCACTTGACGATTCAC+TGG | 0.554919 | 5.4:+18979988 | MS.gene98468:CDS |
| AGCTCTCAGCCGTGAGTCTG+TGG | 0.557460 | 5.4:+18980168 | MS.gene98468:CDS |
| TGGCCAAAGGGTATCGGTGA+AGG | 0.560167 | 5.4:-18982473 | None:intergenic |
| GGTGACTGAGCCAGGCATGC+AGG | 0.560588 | 5.4:-18981115 | None:intergenic |
| TTTAATAGGAGTAGCCGGAA+TGG | 0.564133 | 5.4:-18980212 | None:intergenic |
| ATTGTTAGAAGAACGTGCAC+AGG | 0.565590 | 5.4:+18982792 | MS.gene98468:CDS |
| AGCTGGTAAAGCTCCGACAT+CGG | 0.569312 | 5.4:+18979831 | MS.gene98468:CDS |
| GTACCCATTCGAACCGCTAA+AGG | 0.573542 | 5.4:+18981473 | MS.gene98468:CDS |
| ACTGAAGCTGAAAGGAAACT+AGG | 0.576789 | 5.4:+18982318 | MS.gene98468:CDS |
| GTCGGTGCAATGTACCTGAC+TGG | 0.577872 | 5.4:-18980473 | None:intergenic |
| CACAAGCAAATGGCAATATG+TGG | 0.581777 | 5.4:+18981145 | MS.gene98468:CDS |
| TCTGATGATTCCGACGATGA+TGG | 0.583276 | 5.4:-18979785 | None:intergenic |
| GTGCCTTTAATAGGAGTAGC+CGG | 0.584656 | 5.4:-18980217 | None:intergenic |
| GTTGATTAATGGATCTAGTG+AGG | 0.586296 | 5.4:+18981054 | MS.gene98468:CDS |
| GTGCTTTGACCTGGGTCCGG+GGG | 0.586355 | 5.4:-18979973 | None:intergenic |
| GACAGAGGTAGTAGCAGCGG+CGG | 0.587288 | 5.4:-18979864 | None:intergenic |
| GATTCCGACGATGATGGTGC+TGG | 0.590858 | 5.4:-18979779 | None:intergenic |
| AGAACGGCCTTATGGCCAAA+GGG | 0.597615 | 5.4:-18982485 | None:intergenic |
| GAGCAAGGCATTGTATAGAA+CGG | 0.599279 | 5.4:-18982501 | None:intergenic |
| TGTTGAAACTGTACAGTGCT+TGG | 0.600109 | 5.4:+18980096 | MS.gene98468:CDS |
| TCGTTTGACGTCTTTATCCG+TGG | 0.600195 | 5.4:+18982546 | MS.gene98468:CDS |
| ACTTGAATACTGAAGCTGAA+AGG | 0.602852 | 5.4:+18982310 | MS.gene98468:CDS |
| AGAGACAGAGGTAGTAGCAG+CGG | 0.604458 | 5.4:-18979867 | None:intergenic |
| ACGACCAGTGAGTAAGAAGA+TGG | 0.608825 | 5.4:+18980051 | MS.gene98468:CDS |
| TGGGATGTTGCCATAATTGG+TGG | 0.610485 | 5.4:-18979912 | None:intergenic |
| TGCTGAGAGATTAGAGACAG+AGG | 0.613637 | 5.4:-18979879 | None:intergenic |
| ATAATTCAGTTAGAATTCGA+GGG | 0.614687 | 5.4:+18980014 | MS.gene98468:CDS |
| ATTAATGGATCTAGTGAGGG+TGG | 0.615216 | 5.4:+18981058 | MS.gene98468:CDS |
| TGCACCAGCACCATCATCGT+CGG | 0.615748 | 5.4:+18979775 | MS.gene98468:CDS |
| TAGAACGGCCTTATGGCCAA+AGG | 0.615833 | 5.4:-18982486 | None:intergenic |
| TTGATTAATGGATCTAGTGA+GGG | 0.619081 | 5.4:+18981055 | MS.gene98468:CDS |
| AGATATGGTGCACCACTGCA+TGG | 0.619194 | 5.4:+18983009 | MS.gene98468:intron |
| TAAGCCGCAGAGTATTTCGC+AGG | 0.624017 | 5.4:-18981719 | None:intergenic |
| GAAGCATCCTCTATTTGGAA+GGG | 0.624822 | 5.4:-18980424 | None:intergenic |
| TGCCATAATTGGTGGCTAAG+GGG | 0.625961 | 5.4:-18979904 | None:intergenic |
| TCTCAGCCGTGAGTCTGTGG+TGG | 0.626818 | 5.4:+18980171 | MS.gene98468:CDS |
| CTGGTCTTGATGCTGAAATG+CGG | 0.628437 | 5.4:+18981248 | MS.gene98468:CDS |
| GAACGTCCACCACAGACTCA+CGG | 0.631311 | 5.4:-18980177 | None:intergenic |
| AGAAGGTATTGAGATGCTCA+AGG | 0.631343 | 5.4:+18981749 | MS.gene98468:CDS |
| CGGGGCTGTGTATAGAGCAG+AGG | 0.634042 | 5.4:+18981192 | MS.gene98468:CDS |
| CGTGTTGTAATGCTCTTCTG+TGG | 0.634961 | 5.4:+18983054 | MS.gene98468:CDS |
| TGATTCAGTGAGTGAGCAGA+TGG | 0.646610 | 5.4:+18980132 | MS.gene98468:CDS |
| AGAAGTATCTTGAAGCTGTG+AGG | 0.665661 | 5.4:+18981445 | MS.gene98468:CDS |
| GGAGCTCCAATCCAAGACAC+CGG | 0.683365 | 5.4:+18979940 | MS.gene98468:CDS |
| AAGTGAAGCTGAATATGACA+GGG | 0.700528 | 5.4:+18980450 | MS.gene98468:CDS |
| ATGTCATGCGAATATTATCG+AGG | 0.703735 | 5.4:-18983077 | None:intergenic |
| TATGGTGCACCACTGCATGG+TGG | 0.757084 | 5.4:+18983012 | MS.gene98468:CDS |
| AGTACCTGCGAAATACTCTG+CGG | 0.773213 | 5.4:+18981715 | MS.gene98468:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAGTAGTAAAATATTAA+GGG | - | chr5.4:18982368-18982387 | None:intergenic | 10.0% |
| !! | TATTTAGTAGTAAAATATTA+AGG | - | chr5.4:18982369-18982388 | None:intergenic | 10.0% |
| !!! | TACTTTTTTTTTTGTATTAT+AGG | + | chr5.4:18981496-18981515 | MS.gene98468:intron | 10.0% |
| !!! | AGGTTTTTATTAGTTTTTTA+GGG | + | chr5.4:18980248-18980267 | MS.gene98468:intron | 15.0% |
| !!! | ATAACTTTTGATTGTATTTT+CGG | + | chr5.4:18980974-18980993 | MS.gene98468:intron | 15.0% |
| !!! | ATCAATTAAAATTGACATTT+TGG | + | chr5.4:18981965-18981984 | MS.gene98468:intron | 15.0% |
| !!! | ATGATTTGTCTTATTTTATT+TGG | + | chr5.4:18981358-18981377 | MS.gene98468:intron | 15.0% |
| !!! | ATTACTTTTCTAAAACTAAT+TGG | - | chr5.4:18982344-18982363 | None:intergenic | 15.0% |
| !!! | TTATTGTTGTTATTATTTTC+TGG | + | chr5.4:18982946-18982965 | MS.gene98468:intron | 15.0% |
| !!! | TTTTTAAACTGAATTACAAA+GGG | + | chr5.4:18981089-18981108 | MS.gene98468:CDS | 15.0% |
| !! | AAATAATAACAACAATAACC+AGG | - | chr5.4:18982944-18982963 | None:intergenic | 20.0% |
| !! | AATAATAACAACAATAACCA+GGG | - | chr5.4:18982943-18982962 | None:intergenic | 20.0% |
| !! | TATAAGATTAAAATGTTCAC+AGG | - | chr5.4:18981927-18981946 | None:intergenic | 20.0% |
| !! | TGGATTTCAATTCTATTTAT+AGG | + | chr5.4:18982430-18982449 | MS.gene98468:intron | 20.0% |
| !!! | AAAAAAAAAAGTACCTTTAG+CGG | - | chr5.4:18981489-18981508 | None:intergenic | 20.0% |
| !!! | ATGTCAATGTTTTTTTGTAA+TGG | + | chr5.4:18980661-18980680 | MS.gene98468:intron | 20.0% |
| !!! | CAGGTTTTTATTAGTTTTTT+AGG | + | chr5.4:18980247-18980266 | MS.gene98468:intron | 20.0% |
| !!! | CTATTATGTAAAACTGATTT+TGG | + | chr5.4:18982410-18982429 | MS.gene98468:intron | 20.0% |
| !!! | GTCATGTTTAATATATTTTC+TGG | + | chr5.4:18980882-18980901 | MS.gene98468:intron | 20.0% |
| !!! | GTGTTATGAAAATTTGATTT+TGG | + | chr5.4:18980285-18980304 | MS.gene98468:intron | 20.0% |
| !!! | GTTTTTAAACTGAATTACAA+AGG | + | chr5.4:18981088-18981107 | MS.gene98468:CDS | 20.0% |
| !!! | TAACTTTTGATTGTATTTTC+GGG | + | chr5.4:18980975-18980994 | MS.gene98468:intron | 20.0% |
| !!! | TGTTTTAACTATGATCTAAT+TGG | + | chr5.4:18982200-18982219 | MS.gene98468:intron | 20.0% |
| !!! | TTATTTTATTTGGCAGATTA+TGG | + | chr5.4:18981368-18981387 | MS.gene98468:intron | 20.0% |
| ! | AAACATTGACATTCACATAA+AGG | - | chr5.4:18980653-18980672 | None:intergenic | 25.0% |
| ! | AAATTAAGACTAGAAGACTT+CGG | - | chr5.4:18982116-18982135 | None:intergenic | 25.0% |
| ! | AATAATTCAGTTAGAATTCG+AGG | + | chr5.4:18980013-18980032 | MS.gene98468:CDS | 25.0% |
| ! | AGCATCAATGTAATAAGATA+TGG | - | chr5.4:18982839-18982858 | None:intergenic | 25.0% |
| ! | ATAATTCAGTTAGAATTCGA+GGG | + | chr5.4:18980014-18980033 | MS.gene98468:CDS | 25.0% |
| ! | CAAACTCATCAAAATAACAT+TGG | - | chr5.4:18980835-18980854 | None:intergenic | 25.0% |
| ! | TAAACTATTCAACTTGTAAG+TGG | + | chr5.4:18981787-18981806 | MS.gene98468:intron | 25.0% |
| ! | TAAATTGTATTGTGTGAGTA+GGG | + | chr5.4:18980387-18980406 | MS.gene98468:CDS | 25.0% |
| ! | TCAAATCAAACAACAATAAC+AGG | - | chr5.4:18982703-18982722 | None:intergenic | 25.0% |
| !! | TATTAATGATTTTGCTTTGC+AGG | + | chr5.4:18982257-18982276 | MS.gene98468:intron | 25.0% |
| !!! | ACGTTTGTTGTATATAGATT+CGG | + | chr5.4:18980579-18980598 | MS.gene98468:intron | 25.0% |
| !!! | CTAGTCTTAATTTTCTCTTA+TGG | + | chr5.4:18982123-18982142 | MS.gene98468:intron | 25.0% |
| !!! | GTGGTTTTAAATTATTGATC+TGG | - | chr5.4:18980535-18980554 | None:intergenic | 25.0% |
| AACACAAATCTTAATCAGTG+TGG | - | chr5.4:18980554-18980573 | None:intergenic | 30.0% | |
| ACAGGAAACTTGAGATTTAA+TGG | - | chr5.4:18982685-18982704 | None:intergenic | 30.0% | |
| AGACAAATCATCAGTAAATC+AGG | - | chr5.4:18981349-18981368 | None:intergenic | 30.0% | |
| CAAGATACTTCTTACATTTC+TGG | - | chr5.4:18981437-18981456 | None:intergenic | 30.0% | |
| CGTGATAAAAGAAAGACTAA+AGG | - | chr5.4:18981850-18981869 | None:intergenic | 30.0% | |
| CTAAATTGTATTGTGTGAGT+AGG | + | chr5.4:18980386-18980405 | MS.gene98468:CDS | 30.0% | |
| CTAGATCCATTAATCAACTT+TGG | - | chr5.4:18981052-18981071 | None:intergenic | 30.0% | |
| CTTATTACATTGATGCTTTC+AGG | + | chr5.4:18982842-18982861 | MS.gene98468:CDS | 30.0% | |
| GTGAATTGAAATGAAGTCTT+CGG | - | chr5.4:18981026-18981045 | None:intergenic | 30.0% | |
| TCATAGTTGATCTTATGTAG+TGG | + | chr5.4:18981538-18981557 | MS.gene98468:intron | 30.0% | |
| TTAACTATGATCTAATTGGC+TGG | + | chr5.4:18982204-18982223 | MS.gene98468:intron | 30.0% | |
| TTTCTCTTATGGATAGTTCT+AGG | + | chr5.4:18982134-18982153 | MS.gene98468:intron | 30.0% | |
| ! | TGTGTGGTTTTCTTCATTAT+AGG | + | chr5.4:18980348-18980367 | MS.gene98468:intron | 30.0% |
| ! | TTGATTAATGGATCTAGTGA+GGG | + | chr5.4:18981055-18981074 | MS.gene98468:CDS | 30.0% |
| !! | AATGGAAGTGCTAATACATT+TGG | - | chr5.4:18982667-18982686 | None:intergenic | 30.0% |
| !! | CTATATATTTGTTGTCGCTT+AGG | + | chr5.4:18982727-18982746 | MS.gene98468:intron | 30.0% |
| !! | TGATTTTAACCGTGTTTTTG+AGG | + | chr5.4:18981168-18981187 | MS.gene98468:CDS | 30.0% |
| !!! | TGTTTTTTTGTAATGGATGC+AGG | + | chr5.4:18980668-18980687 | MS.gene98468:intron | 30.0% |
| AAACCAACTGGAAATTGGTT+AGG | + | chr5.4:18982048-18982067 | MS.gene98468:intron | 35.0% | |
| AAGTGAAGCTGAATATGACA+GGG | + | chr5.4:18980450-18980469 | MS.gene98468:CDS | 35.0% | |
| AATGTGTGATCTTCCAGATA+TGG | + | chr5.4:18982994-18983013 | MS.gene98468:intron | 35.0% | |
| ACAGATATACCTCGAAATAG+TGG | - | chr5.4:18981282-18981301 | None:intergenic | 35.0% | |
| ACTAATAAAAACCTGCTGAG+TGG | - | chr5.4:18980242-18980261 | None:intergenic | 35.0% | |
| ACTTGAATACTGAAGCTGAA+AGG | + | chr5.4:18982310-18982329 | MS.gene98468:CDS | 35.0% | |
| AGTAGAGACATCCTAAACAT+AGG | - | chr5.4:18982914-18982933 | None:intergenic | 35.0% | |
| AGTGTGAGTTGCATTGTTTA+GGG | + | chr5.4:18980308-18980327 | MS.gene98468:intron | 35.0% | |
| ATGTCATGCGAATATTATCG+AGG | - | chr5.4:18983080-18983099 | None:intergenic | 35.0% | |
| CTCTATTTGGAAGGGTAAAA+CGG | - | chr5.4:18980419-18980438 | None:intergenic | 35.0% | |
| CTTCAACATTATCCGCAATA+CGG | - | chr5.4:18980782-18980801 | None:intergenic | 35.0% | |
| GTCTCCAGAAAACATTTCAT+CGG | + | chr5.4:18982023-18982042 | MS.gene98468:intron | 35.0% | |
| TAATGGGATGTTGCCATAAT+TGG | - | chr5.4:18979918-18979937 | None:intergenic | 35.0% | |
| TATGATGGTATTGTGTTGTG+TGG | + | chr5.4:18980332-18980351 | MS.gene98468:intron | 35.0% | |
| TCAGTATTCAAGTCACCAAA+AGG | - | chr5.4:18982303-18982322 | None:intergenic | 35.0% | |
| TCTATTTGGAAGGGTAAAAC+GGG | - | chr5.4:18980418-18980437 | None:intergenic | 35.0% | |
| TTAGGTGAGGAGATAATTTC+AGG | + | chr5.4:18982745-18982764 | MS.gene98468:intron | 35.0% | |
| ! | ATACATTTGGAGAAGCATGA+CGG | - | chr5.4:18982654-18982673 | None:intergenic | 35.0% |
| ! | CACACTCCAAAGTTGATTAA+TGG | + | chr5.4:18981043-18981062 | MS.gene98468:CDS | 35.0% |
| ! | CAGTTTCAACATTTTCTCTG+AGG | - | chr5.4:18980087-18980106 | None:intergenic | 35.0% |
| ! | CTTGTTGTATCTTCTTACCA+CGG | - | chr5.4:18982566-18982585 | None:intergenic | 35.0% |
| ! | GCACGTTCTTCTAACAATTT+TGG | - | chr5.4:18982790-18982809 | None:intergenic | 35.0% |
| ! | GTGGTTTTCTTCATTATAGG+TGG | + | chr5.4:18980351-18980370 | MS.gene98468:intron | 35.0% |
| ! | GTTGATTAATGGATCTAGTG+AGG | + | chr5.4:18981054-18981073 | MS.gene98468:CDS | 35.0% |
| ! | TCAAGGAATTTTCCGTATTG+CGG | + | chr5.4:18980767-18980786 | MS.gene98468:CDS | 35.0% |
| ! | TGCATTGTTTAGGGTTATGA+TGG | + | chr5.4:18980317-18980336 | MS.gene98468:intron | 35.0% |
| ! | TGTCGCTTATACCTATGTTT+AGG | + | chr5.4:18982900-18982919 | MS.gene98468:intron | 35.0% |
| ! | TGTGTGTTTGAAATCGTTGA+GGG | + | chr5.4:18981317-18981336 | MS.gene98468:intron | 35.0% |
| ! | TTGTGTGTTTGAAATCGTTG+AGG | + | chr5.4:18981316-18981335 | MS.gene98468:intron | 35.0% |
| ! | TTTGCCGATGAAATGTTTTC+TGG | - | chr5.4:18982030-18982049 | None:intergenic | 35.0% |
| !! | TTCTAGAAGCATCCTCTATT+TGG | - | chr5.4:18980432-18980451 | None:intergenic | 35.0% |
| !! | TTTTGATTGTATTTTCGGGC+AGG | + | chr5.4:18980979-18980998 | MS.gene98468:intron | 35.0% |
| !!! | TAGTTTTGATCATCAGAGCA+AGG | - | chr5.4:18982519-18982538 | None:intergenic | 35.0% |
| !!! | TTTAACCGTGTTTTTGAGGT+CGG | + | chr5.4:18981172-18981191 | MS.gene98468:CDS | 35.0% |
| ACCTCAACTTCACAAGCAAA+TGG | + | chr5.4:18981135-18981154 | MS.gene98468:CDS | 40.0% | |
| ACTGAAGCTGAAAGGAAACT+AGG | + | chr5.4:18982318-18982337 | MS.gene98468:CDS | 40.0% | |
| ATTCCGGCTACTCCTATTAA+AGG | + | chr5.4:18980214-18980233 | MS.gene98468:CDS | 40.0% | |
| ATTGTTAGAAGAACGTGCAC+AGG | + | chr5.4:18982792-18982811 | MS.gene98468:CDS | 40.0% | |
| ATTTCATCGGCAAAACCAAC+TGG | + | chr5.4:18982036-18982055 | MS.gene98468:intron | 40.0% | |
| CACAAGCAAATGGCAATATG+TGG | + | chr5.4:18981145-18981164 | MS.gene98468:CDS | 40.0% | |
| CATTGTATAGAACGGCCTTA+TGG | - | chr5.4:18982496-18982515 | None:intergenic | 40.0% | |
| CGACTGTTCATCGTTAGTTA+CGG | + | chr5.4:18980492-18980511 | MS.gene98468:intron | 40.0% | |
| CGGAAAATTCCTTGATTAGC+TGG | - | chr5.4:18980762-18980781 | None:intergenic | 40.0% | |
| CGTAACTAACGATGAACAGT+CGG | - | chr5.4:18980494-18980513 | None:intergenic | 40.0% | |
| GAAGTGAAGCTGAATATGAC+AGG | + | chr5.4:18980449-18980468 | MS.gene98468:CDS | 40.0% | |
| GAGTGTGAGTTGCATTGTTT+AGG | + | chr5.4:18980307-18980326 | MS.gene98468:intron | 40.0% | |
| TATTTCCACGTGACCCAAAA+AGG | + | chr5.4:18983103-18983122 | MS.gene98468:CDS | 40.0% | |
| TGTTGAAACTGTACAGTGCT+TGG | + | chr5.4:18980096-18980115 | MS.gene98468:CDS | 40.0% | |
| TTAAGACTAGAAGACTTCGG+AGG | - | chr5.4:18982113-18982132 | None:intergenic | 40.0% | |
| TTATGGCAACATCCCATTAG+AGG | + | chr5.4:18979919-18979938 | MS.gene98468:CDS | 40.0% | |
| TTGCAAACACCAGCTAATCA+AGG | + | chr5.4:18980750-18980769 | MS.gene98468:CDS | 40.0% | |
| TTTAATAGGAGTAGCCGGAA+TGG | - | chr5.4:18980215-18980234 | None:intergenic | 40.0% | |
| ! | ACAACTTGTTCGTGTGAATC+AGG | + | chr5.4:18980698-18980717 | MS.gene98468:CDS | 40.0% |
| ! | ATTAATGGATCTAGTGAGGG+TGG | + | chr5.4:18981058-18981077 | MS.gene98468:CDS | 40.0% |
| ! | CGTTTTACCCTTCCAAATAG+AGG | + | chr5.4:18980417-18980436 | MS.gene98468:CDS | 40.0% |
| ! | GAAGCATCCTCTATTTGGAA+GGG | - | chr5.4:18980427-18980446 | None:intergenic | 40.0% |
| ! | GATTTTGCTTTGCAGGAAGT+TGG | + | chr5.4:18982264-18982283 | MS.gene98468:intron | 40.0% |
| ! | GGAGTAGAAATTGAGCCTTT+TGG | + | chr5.4:18982285-18982304 | MS.gene98468:CDS | 40.0% |
| ! | GTGTGTTTGAAATCGTTGAG+GGG | + | chr5.4:18981318-18981337 | MS.gene98468:intron | 40.0% |
| ! | TTGCCATAATTGGTGGCTAA+GGG | - | chr5.4:18979908-18979927 | None:intergenic | 40.0% |
| !! | AGAAGCATCCTCTATTTGGA+AGG | - | chr5.4:18980428-18980447 | None:intergenic | 40.0% |
| !! | AGAAGGTATTGAGATGCTCA+AGG | + | chr5.4:18981749-18981768 | MS.gene98468:CDS | 40.0% |
| !! | AGAAGTATCTTGAAGCTGTG+AGG | + | chr5.4:18981445-18981464 | MS.gene98468:CDS | 40.0% |
| !! | ATGGAGTTAAGGCACTGATA+AGG | + | chr5.4:18981896-18981915 | MS.gene98468:intron | 40.0% |
| !! | GAGCAAGGCATTGTATAGAA+CGG | - | chr5.4:18982504-18982523 | None:intergenic | 40.0% |
| !! | GTATGCGTACATGCTTTTTG+CGG | + | chr5.4:18981616-18981635 | MS.gene98468:intron | 40.0% |
| !! | TATTTGTTGTCGCTTAGGTG+AGG | + | chr5.4:18982732-18982751 | MS.gene98468:intron | 40.0% |
| !!! | TTAACCGTGTTTTTGAGGTC+GGG | + | chr5.4:18981173-18981192 | MS.gene98468:CDS | 40.0% |
| !!! | TTTTTGTAATGGATGCAGGC+TGG | + | chr5.4:18980672-18980691 | MS.gene98468:intron | 40.0% |
| AACGCCATCTTCTTACTCAC+TGG | - | chr5.4:18980058-18980077 | None:intergenic | 45.0% | |
| AAGCGACACTCAATGCTACA+GGG | - | chr5.4:18982888-18982907 | None:intergenic | 45.0% | |
| AAGTAAAAAAGCCGCCAAGC+TGG | + | chr5.4:18979814-18979833 | MS.gene98468:CDS | 45.0% | |
| AATCGTCAAGTGCTTTGACC+TGG | - | chr5.4:18979985-18980004 | None:intergenic | 45.0% | |
| ACACAGATGCCTGTGAGTAA+AGG | - | chr5.4:18981221-18981240 | None:intergenic | 45.0% | |
| ACATGCCAGCATCCTTTACA+GGG | - | chr5.4:18981993-18982012 | None:intergenic | 45.0% | |
| ACGACCAGTGAGTAAGAAGA+TGG | + | chr5.4:18980051-18980070 | MS.gene98468:CDS | 45.0% | |
| ACTGCAGATTCACAGGGTTA+TGG | - | chr5.4:18981698-18981717 | None:intergenic | 45.0% | |
| AGGCATCTGTGTGAGTTTAC+TGG | + | chr5.4:18981229-18981248 | MS.gene98468:CDS | 45.0% | |
| AGTACCTGCGAAATACTCTG+CGG | + | chr5.4:18981715-18981734 | MS.gene98468:intron | 45.0% | |
| AGTACCTTTAGCGGTTCGAA+TGG | - | chr5.4:18981480-18981499 | None:intergenic | 45.0% | |
| ATCACGACGCTGAGTTAGAA+AGG | + | chr5.4:18981864-18981883 | MS.gene98468:intron | 45.0% | |
| ATCGTCAAGTGCTTTGACCT+GGG | - | chr5.4:18979984-18980003 | None:intergenic | 45.0% | |
| ATCTGCTCACTCACTGAATC+AGG | - | chr5.4:18980133-18980152 | None:intergenic | 45.0% | |
| ATGTCTCTACTACTGAACCC+TGG | + | chr5.4:18982923-18982942 | MS.gene98468:intron | 45.0% | |
| CAGAGGATTCCTTTACTCAC+AGG | + | chr5.4:18981209-18981228 | MS.gene98468:CDS | 45.0% | |
| CGGCAAAACCAACTGGAAAT+TGG | + | chr5.4:18982043-18982062 | MS.gene98468:intron | 45.0% | |
| CGTGTTGTAATGCTCTTCTG+TGG | + | chr5.4:18983054-18983073 | MS.gene98468:CDS | 45.0% | |
| GAGCCTAACCAATTTCCAGT+TGG | - | chr5.4:18982054-18982073 | None:intergenic | 45.0% | |
| GATTGACTGCCACTATTTCG+AGG | + | chr5.4:18981270-18981289 | MS.gene98468:CDS | 45.0% | |
| GCCATTTGCTTGTGAAGTTG+AGG | - | chr5.4:18981139-18981158 | None:intergenic | 45.0% | |
| GTACCTTTAGCGGTTCGAAT+GGG | - | chr5.4:18981479-18981498 | None:intergenic | 45.0% | |
| GTGCCTTTAATAGGAGTAGC+CGG | - | chr5.4:18980220-18980239 | None:intergenic | 45.0% | |
| TAAGCGACACTCAATGCTAC+AGG | - | chr5.4:18982889-18982908 | None:intergenic | 45.0% | |
| TATCCTTCACCGATACCCTT+TGG | + | chr5.4:18982470-18982489 | MS.gene98468:CDS | 45.0% | |
| TCGAGGTATATCTGTCACAC+TGG | + | chr5.4:18981287-18981306 | MS.gene98468:intron | 45.0% | |
| TCGTTTGACGTCTTTATCCG+TGG | + | chr5.4:18982546-18982565 | MS.gene98468:CDS | 45.0% | |
| TCTGATGATTCCGACGATGA+TGG | - | chr5.4:18979788-18979807 | None:intergenic | 45.0% | |
| TGATTCAGTGAGTGAGCAGA+TGG | + | chr5.4:18980132-18980151 | MS.gene98468:CDS | 45.0% | |
| TGCTGAGAGATTAGAGACAG+AGG | - | chr5.4:18979882-18979901 | None:intergenic | 45.0% | |
| TGCTGAGTGGTGCCTTTAAT+AGG | - | chr5.4:18980229-18980248 | None:intergenic | 45.0% | |
| TGGGATGTTGCCATAATTGG+TGG | - | chr5.4:18979915-18979934 | None:intergenic | 45.0% | |
| ! | CAAAGCACTTGACGATTCAC+TGG | + | chr5.4:18979988-18980007 | MS.gene98468:CDS | 45.0% |
| ! | GTTGCCATAATTGGTGGCTA+AGG | - | chr5.4:18979909-18979928 | None:intergenic | 45.0% |
| ! | TCATGGCGTTGTTTCCATTC+CGG | + | chr5.4:18980198-18980217 | MS.gene98468:CDS | 45.0% |
| ! | TGCCATAATTGGTGGCTAAG+GGG | - | chr5.4:18979907-18979926 | None:intergenic | 45.0% |
| ! | TGGATTGGAGCTCCTCTAAT+GGG | - | chr5.4:18979934-18979953 | None:intergenic | 45.0% |
| ! | TTGGATTGGAGCTCCTCTAA+TGG | - | chr5.4:18979935-18979954 | None:intergenic | 45.0% |
| !! | CTGGTCTTGATGCTGAAATG+CGG | + | chr5.4:18981248-18981267 | MS.gene98468:CDS | 45.0% |
| !! | TATTAAAGGCACCACTCAGC+AGG | + | chr5.4:18980228-18980247 | MS.gene98468:CDS | 45.0% |
| !!! | GACATTTTGGAGCCCTGTAA+AGG | + | chr5.4:18981978-18981997 | MS.gene98468:intron | 45.0% |
| !!! | GTAATCCTTTTTGGGTCACG+TGG | - | chr5.4:18983111-18983130 | None:intergenic | 45.0% |
| !!! | TAACCGTGTTTTTGAGGTCG+GGG | + | chr5.4:18981174-18981193 | MS.gene98468:CDS | 45.0% |
| ACACCCTAGGACAGAACAGT+GGG | - | chr5.4:18982076-18982095 | None:intergenic | 50.0% | |
| ACCGATACCCTTTGGCCATA+AGG | + | chr5.4:18982478-18982497 | MS.gene98468:CDS | 50.0% | |
| ACGACGCTGAGTTAGAAAGG+TGG | + | chr5.4:18981867-18981886 | MS.gene98468:intron | 50.0% | |
| AGAGACAGAGGTAGTAGCAG+CGG | - | chr5.4:18979870-18979889 | None:intergenic | 50.0% | |
| AGATATGGTGCACCACTGCA+TGG | + | chr5.4:18983009-18983028 | MS.gene98468:intron | 50.0% | |
| AGCTGGTAAAGCTCCGACAT+CGG | + | chr5.4:18979831-18979850 | MS.gene98468:CDS | 50.0% | |
| ATGCAGTGGTGCACCATATC+TGG | - | chr5.4:18983010-18983029 | None:intergenic | 50.0% | |
| ATGTCGGAGCTTTACCAGCT+TGG | - | chr5.4:18979831-18979850 | None:intergenic | 50.0% | |
| CACATGCCAGCATCCTTTAC+AGG | - | chr5.4:18981994-18982013 | None:intergenic | 50.0% | |
| CGACGCTGAGTTAGAAAGGT+GGG | + | chr5.4:18981868-18981887 | MS.gene98468:intron | 50.0% | |
| CTGCGGCTTACATACGAAGA+AGG | + | chr5.4:18981732-18981751 | MS.gene98468:CDS | 50.0% | |
| GACCCCTTAGCCACCAATTA+TGG | + | chr5.4:18979902-18979921 | MS.gene98468:CDS | 50.0% | |
| GTACCCATTCGAACCGCTAA+AGG | + | chr5.4:18981473-18981492 | MS.gene98468:CDS | 50.0% | |
| GTTAGAAAGGTGGGAGGTGA+TGG | + | chr5.4:18981877-18981896 | MS.gene98468:intron | 50.0% | |
| TGAATATGACAGGGCCAGTC+AGG | + | chr5.4:18980459-18980478 | MS.gene98468:CDS | 50.0% | |
| ! | AGAACGGCCTTATGGCCAAA+GGG | - | chr5.4:18982488-18982507 | None:intergenic | 50.0% |
| ! | GCAGGTACTGCAGATTCACA+GGG | - | chr5.4:18981704-18981723 | None:intergenic | 50.0% |
| ! | GCCTTATGGCCAAAGGGTAT+CGG | - | chr5.4:18982482-18982501 | None:intergenic | 50.0% |
| ! | TAAGCCGCAGAGTATTTCGC+AGG | - | chr5.4:18981722-18981741 | None:intergenic | 50.0% |
| ! | TAGAACGGCCTTATGGCCAA+AGG | - | chr5.4:18982489-18982508 | None:intergenic | 50.0% |
| AAGTGCTTTGACCTGGGTCC+GGG | - | chr5.4:18979978-18979997 | None:intergenic | 55.0% | |
| CAAGTGCTTTGACCTGGGTC+CGG | - | chr5.4:18979979-18979998 | None:intergenic | 55.0% | |
| CACACCCTAGGACAGAACAG+TGG | - | chr5.4:18982077-18982096 | None:intergenic | 55.0% | |
| CAGCCCCGACCTCAAAAACA+CGG | - | chr5.4:18981180-18981199 | None:intergenic | 55.0% | |
| CGCTGAGTTAGAAAGGTGGG+AGG | + | chr5.4:18981871-18981890 | MS.gene98468:intron | 55.0% | |
| GAACGTCCACCACAGACTCA+CGG | - | chr5.4:18980180-18980199 | None:intergenic | 55.0% | |
| GAAGTTGAGGTGACTGAGCC+AGG | - | chr5.4:18981126-18981145 | None:intergenic | 55.0% | |
| GACTTCGGAGGATCAGCTCT+CGG | - | chr5.4:18982101-18982120 | None:intergenic | 55.0% | |
| GATGGACCGGTGTCTTGGAT+TGG | - | chr5.4:18979949-18979968 | None:intergenic | 55.0% | |
| GCTCCCACTGTTCTGTCCTA+GGG | + | chr5.4:18982070-18982089 | MS.gene98468:intron | 55.0% | |
| GCTCCGACATCGGCAACAAA+TGG | + | chr5.4:18979841-18979860 | MS.gene98468:CDS | 55.0% | |
| GGAGCTCCAATCCAAGACAC+CGG | + | chr5.4:18979940-18979959 | MS.gene98468:CDS | 55.0% | |
| GTCGGTGCAATGTACCTGAC+TGG | - | chr5.4:18980476-18980495 | None:intergenic | 55.0% | |
| TATGGTGCACCACTGCATGG+TGG | + | chr5.4:18983012-18983031 | MS.gene98468:CDS | 55.0% | |
| TCGGAGCTTTACCAGCTTGG+CGG | - | chr5.4:18979828-18979847 | None:intergenic | 55.0% | |
| TGCACCAGCACCATCATCGT+CGG | + | chr5.4:18979775-18979794 | MS.gene98468:CDS | 55.0% | |
| TGGAGCCCTGTAAAGGATGC+TGG | + | chr5.4:18981985-18982004 | MS.gene98468:intron | 55.0% | |
| TGGTGCAGGCTCTTTGCACT+CGG | - | chr5.4:18979762-18979781 | None:intergenic | 55.0% | |
| ! | CGCAGGTACTGCAGATTCAC+AGG | - | chr5.4:18981705-18981724 | None:intergenic | 55.0% |
| ! | CGGCCATTTGTTGCCGATGT+CGG | - | chr5.4:18979847-18979866 | None:intergenic | 55.0% |
| ! | GATTCCGACGATGATGGTGC+TGG | - | chr5.4:18979782-18979801 | None:intergenic | 55.0% |
| !! | GAGTCTGTGGTGGACGTTCA+TGG | + | chr5.4:18980181-18980200 | MS.gene98468:CDS | 55.0% |
| !! | GGTGGGAGGTGATGGAGTTA+AGG | + | chr5.4:18981885-18981904 | MS.gene98468:intron | 55.0% |
| !! | TGGCCAAAGGGTATCGGTGA+AGG | - | chr5.4:18982476-18982495 | None:intergenic | 55.0% |
| AGCTCTCAGCCGTGAGTCTG+TGG | + | chr5.4:18980168-18980187 | MS.gene98468:CDS | 60.0% | |
| AGTGCTTTGACCTGGGTCCG+GGG | - | chr5.4:18979977-18979996 | None:intergenic | 60.0% | |
| CGGGGCTGTGTATAGAGCAG+AGG | + | chr5.4:18981192-18981211 | MS.gene98468:CDS | 60.0% | |
| GACAGAGGTAGTAGCAGCGG+CGG | - | chr5.4:18979867-18979886 | None:intergenic | 60.0% | |
| GCACCACTGCATGGTGGCTT+TGG | + | chr5.4:18983018-18983037 | MS.gene98468:CDS | 60.0% | |
| GGCTCCCACTGTTCTGTCCT+AGG | + | chr5.4:18982069-18982088 | MS.gene98468:intron | 60.0% | |
| GGTGCAGGCTCTTTGCACTC+GGG | - | chr5.4:18979761-18979780 | None:intergenic | 60.0% | |
| TCAGCTCTCGGTCACACCCT+AGG | - | chr5.4:18982089-18982108 | None:intergenic | 60.0% | |
| TCTCAGCCGTGAGTCTGTGG+TGG | + | chr5.4:18980171-18980190 | MS.gene98468:CDS | 60.0% | |
| !! | CAAAGGGCATCCTGCATGCC+TGG | + | chr5.4:18981105-18981124 | MS.gene98468:CDS | 60.0% |
| !! | GACGATGATGGTGCTGGTGC+AGG | - | chr5.4:18979776-18979795 | None:intergenic | 60.0% |
| GACGGGATGGACCGGTGTCT+TGG | - | chr5.4:18979954-18979973 | None:intergenic | 65.0% | |
| GCGCCAAAGCCACCATGCAG+TGG | - | chr5.4:18983024-18983043 | None:intergenic | 65.0% | |
| GGTGACTGAGCCAGGCATGC+AGG | - | chr5.4:18981118-18981137 | None:intergenic | 65.0% | |
| GTGCTTTGACCTGGGTCCGG+GGG | - | chr5.4:18979976-18979995 | None:intergenic | 65.0% | |
| TTTGACCTGGGTCCGGGGGA+CGG | - | chr5.4:18979972-18979991 | None:intergenic | 65.0% | |
| !! | CTGCATGGTGGCTTTGGCGC+AGG | + | chr5.4:18983024-18983043 | MS.gene98468:CDS | 65.0% |
| !! | TGGTGGCTTTGGCGCAGGCT+TGG | + | chr5.4:18983029-18983048 | MS.gene98468:CDS | 65.0% |
| TTGACCTGGGTCCGGGGGAC+GGG | - | chr5.4:18979971-18979990 | None:intergenic | 70.0% | |
| CACCGGTCCATCCCGTCCCC+CGG | + | chr5.4:18979957-18979976 | MS.gene98468:CDS | 75.0% | |
| GTCCGGGGGACGGGATGGAC+CGG | - | chr5.4:18979962-18979981 | None:intergenic | 75.0% | |
| ! | CCATCCCGTCCCCCGGACCC+AGG | + | chr5.4:18979964-18979983 | MS.gene98468:CDS | 80.0% |
| ! | CCTGGGTCCGGGGGACGGGA+TGG | - | chr5.4:18979967-18979986 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 18979749 | 18983137 | 18979749 | ID=MS.gene98468 |
| chr5.4 | mRNA | 18979749 | 18983137 | 18979749 | ID=MS.gene98468.t1;Parent=MS.gene98468 |
| chr5.4 | exon | 18979749 | 18980249 | 18979749 | ID=MS.gene98468.t1.exon1;Parent=MS.gene98468.t1 |
| chr5.4 | CDS | 18979749 | 18980249 | 18979749 | ID=cds.MS.gene98468.t1;Parent=MS.gene98468.t1 |
| chr5.4 | exon | 18980370 | 18980480 | 18980370 | ID=MS.gene98468.t1.exon2;Parent=MS.gene98468.t1 |
| chr5.4 | CDS | 18980370 | 18980480 | 18980370 | ID=cds.MS.gene98468.t1;Parent=MS.gene98468.t1 |
| chr5.4 | exon | 18980690 | 18980803 | 18980690 | ID=MS.gene98468.t1.exon3;Parent=MS.gene98468.t1 |
| chr5.4 | CDS | 18980690 | 18980803 | 18980690 | ID=cds.MS.gene98468.t1;Parent=MS.gene98468.t1 |
| chr5.4 | exon | 18981001 | 18981291 | 18981001 | ID=MS.gene98468.t1.exon4;Parent=MS.gene98468.t1 |
| chr5.4 | CDS | 18981001 | 18981291 | 18981001 | ID=cds.MS.gene98468.t1;Parent=MS.gene98468.t1 |
| chr5.4 | exon | 18981384 | 18981494 | 18981384 | ID=MS.gene98468.t1.exon5;Parent=MS.gene98468.t1 |
| chr5.4 | CDS | 18981384 | 18981494 | 18981384 | ID=cds.MS.gene98468.t1;Parent=MS.gene98468.t1 |
| chr5.4 | exon | 18981717 | 18981770 | 18981717 | ID=MS.gene98468.t1.exon6;Parent=MS.gene98468.t1 |
| chr5.4 | CDS | 18981717 | 18981770 | 18981717 | ID=cds.MS.gene98468.t1;Parent=MS.gene98468.t1 |
| chr5.4 | exon | 18982279 | 18982358 | 18982279 | ID=MS.gene98468.t1.exon7;Parent=MS.gene98468.t1 |
| chr5.4 | CDS | 18982279 | 18982358 | 18982279 | ID=cds.MS.gene98468.t1;Parent=MS.gene98468.t1 |
| chr5.4 | exon | 18982452 | 18982567 | 18982452 | ID=MS.gene98468.t1.exon8;Parent=MS.gene98468.t1 |
| chr5.4 | CDS | 18982452 | 18982567 | 18982452 | ID=cds.MS.gene98468.t1;Parent=MS.gene98468.t1 |
| chr5.4 | exon | 18982749 | 18982863 | 18982749 | ID=MS.gene98468.t1.exon9;Parent=MS.gene98468.t1 |
| chr5.4 | CDS | 18982749 | 18982863 | 18982749 | ID=cds.MS.gene98468.t1;Parent=MS.gene98468.t1 |
| chr5.4 | exon | 18983011 | 18983137 | 18983011 | ID=MS.gene98468.t1.exon10;Parent=MS.gene98468.t1 |
| chr5.4 | CDS | 18983011 | 18983137 | 18983011 | ID=cds.MS.gene98468.t1;Parent=MS.gene98468.t1 |
| Gene Sequence |
| Protein sequence |
