Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99709.t1 | XP_003615951.1 | 99.1 | 233 | 2 | 0 | 1 | 233 | 1 | 233 | 3.50E-101 | 377.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99709.t1 | O22922 | 76.9 | 234 | 51 | 2 | 1 | 233 | 1 | 232 | 2.0e-81 | 303.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99709.t1 | G7K5T4 | 99.1 | 233 | 2 | 0 | 1 | 233 | 1 | 233 | 2.5e-101 | 377.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050290 | MS.gene99709 | 0.803885 | 2.82E-49 | -1.69E-46 |
| MS.gene054937 | MS.gene99709 | 0.819158 | 1.34E-52 | -1.69E-46 |
| MS.gene057052 | MS.gene99709 | 0.812239 | 4.69E-51 | -1.69E-46 |
| MS.gene057092 | MS.gene99709 | 0.82354 | 1.31E-53 | -1.69E-46 |
| MS.gene060856 | MS.gene99709 | 0.808943 | 2.42E-50 | -1.69E-46 |
| MS.gene061145 | MS.gene99709 | 0.805624 | 1.22E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99709.t1 | MTR_5g074430 | 98.283 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 2.71e-173 | 476 |
| MS.gene99709.t1 | MTR_5g074430 | 97.863 | 234 | 4 | 1 | 1 | 233 | 1 | 234 | 1.15e-171 | 471 |
| MS.gene99709.t1 | MTR_1g055405 | 94.382 | 178 | 8 | 2 | 57 | 233 | 103 | 279 | 5.37e-108 | 312 |
| MS.gene99709.t1 | MTR_4g084990 | 61.864 | 236 | 80 | 3 | 7 | 233 | 11 | 245 | 1.30e-100 | 292 |
| MS.gene99709.t1 | MTR_4g084990 | 60.256 | 234 | 86 | 2 | 7 | 233 | 11 | 244 | 1.04e-99 | 290 |
| MS.gene99709.t1 | MTR_7g108715 | 57.500 | 160 | 58 | 3 | 83 | 233 | 3 | 161 | 3.89e-56 | 176 |
| MS.gene99709.t1 | MTR_4g084990 | 56.204 | 137 | 60 | 0 | 7 | 143 | 11 | 147 | 8.24e-53 | 169 |
| MS.gene99709.t1 | MTR_3g072860 | 84.810 | 79 | 12 | 0 | 46 | 124 | 62 | 140 | 5.09e-30 | 109 |
| MS.gene99709.t1 | MTR_7g108725 | 64.615 | 65 | 23 | 0 | 7 | 71 | 11 | 75 | 2.18e-25 | 95.9 |
| MS.gene99709.t1 | MTR_4g085040 | 64.615 | 65 | 23 | 0 | 9 | 73 | 13 | 77 | 7.26e-23 | 91.3 |
| MS.gene99709.t1 | MTR_4g085000 | 63.333 | 60 | 22 | 0 | 5 | 64 | 9 | 68 | 1.80e-21 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99709.t1 | AT2G30260 | 69.915 | 236 | 64 | 3 | 1 | 233 | 1 | 232 | 6.58e-124 | 351 |
| MS.gene99709.t1 | AT1G06960 | 72.961 | 233 | 59 | 2 | 1 | 233 | 1 | 229 | 6.23e-122 | 346 |
| MS.gene99709.t1 | AT1G06960 | 70.707 | 198 | 54 | 2 | 36 | 233 | 7 | 200 | 1.45e-96 | 280 |
| MS.gene99709.t1 | AT2G47580 | 56.904 | 239 | 92 | 4 | 5 | 233 | 13 | 250 | 6.09e-87 | 258 |
| MS.gene99709.t1 | AT2G30260 | 68.919 | 148 | 41 | 1 | 1 | 148 | 1 | 143 | 5.74e-72 | 217 |
| MS.gene99709.t1 | AT1G06960 | 74.825 | 143 | 34 | 1 | 1 | 143 | 1 | 141 | 1.93e-70 | 213 |
| MS.gene99709.t1 | AT1G06960 | 82.524 | 103 | 18 | 0 | 1 | 103 | 1 | 103 | 8.16e-63 | 192 |
| MS.gene99709.t1 | AT1G06960 | 66.887 | 151 | 46 | 2 | 83 | 233 | 4 | 150 | 4.87e-62 | 191 |
| MS.gene99709.t1 | AT1G06960 | 75.510 | 98 | 24 | 0 | 36 | 133 | 7 | 104 | 4.87e-45 | 147 |
Find 53 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCAATATGGAAGGATTT+TGG | 0.143011 | 5.2:-62348778 | MS.gene99709:CDS |
| ATTGAGATTCTTAATGTAAA+TGG | 0.200962 | 5.2:+62350927 | None:intergenic |
| CATCTGTCGCACTGCATTAC+TGG | 0.268948 | 5.2:+62348686 | None:intergenic |
| TATTGCTTATTCTCTCAATA+TGG | 0.294966 | 5.2:-62348789 | MS.gene99709:CDS |
| AAACCAGAGAGGATGCTTTC+AGG | 0.319590 | 5.2:-62350970 | None:intergenic |
| TTAATGTAAATGGTTTGATT+TGG | 0.322185 | 5.2:+62350937 | None:intergenic |
| CTTAGCAAAGTTTATAATCA+TGG | 0.324640 | 5.2:+62345386 | None:intergenic |
| GCCTCTTGGGCACCGGACCC+TGG | 0.364979 | 5.2:+62345621 | None:intergenic |
| CTCTATGAACAAAATATTGT+TGG | 0.365120 | 5.2:+62345590 | None:intergenic |
| TGTTGGGAGCAGCTGCCTCT+TGG | 0.368601 | 5.2:+62345607 | None:intergenic |
| GTTGGGAGCAGCTGCCTCTT+GGG | 0.371933 | 5.2:+62345608 | None:intergenic |
| GCACCATGTGTTCCACCATT+AGG | 0.384777 | 5.2:+62346156 | None:intergenic |
| GCCTCATTCCGTCCAGGGTC+CGG | 0.398715 | 5.2:-62345633 | MS.gene99709:CDS |
| ATGTAAATGGTTTGATTTGG+AGG | 0.406769 | 5.2:+62350940 | None:intergenic |
| AAACAATCTTCTGTGCCTAA+TGG | 0.424244 | 5.2:-62346171 | MS.gene99709:CDS |
| AACCAGAGAGGATGCTTTCA+GGG | 0.433914 | 5.2:-62350969 | None:intergenic |
| AGCAGCTGCCTCTTGGGCAC+CGG | 0.444275 | 5.2:+62345614 | None:intergenic |
| ACAATCATCCATGGCAATGC+AGG | 0.453318 | 5.2:-62345442 | MS.gene99709:CDS |
| TCTATGAACAAAATATTGTT+GGG | 0.458630 | 5.2:+62345591 | None:intergenic |
| GACGCCTAAGCTTCGAGGAC+AGG | 0.460104 | 5.2:-62348739 | MS.gene99709:CDS |
| AGAGGGAAGCTTTGTTCCAA+GGG | 0.460175 | 5.2:-62348087 | MS.gene99709:CDS |
| CGCTTGATCGAAGCAAAGCC+AGG | 0.463784 | 5.2:-62345495 | MS.gene99709:CDS |
| TTAGCAAAGTTTATAATCAT+GGG | 0.465775 | 5.2:+62345387 | None:intergenic |
| CATGCCTGTCCTCGAAGCTT+AGG | 0.475388 | 5.2:+62348735 | None:intergenic |
| ACCGGACCCTGGACGGAATG+AGG | 0.501996 | 5.2:+62345632 | None:intergenic |
| AAGCGCACTTCCTTAAAACC+TGG | 0.502688 | 5.2:+62345513 | None:intergenic |
| CAGCAGGCCTCATTCCGTCC+AGG | 0.503368 | 5.2:-62345639 | MS.gene99709:intron |
| CTAAAGACGCCTAAGCTTCG+AGG | 0.510089 | 5.2:-62348744 | MS.gene99709:CDS |
| AAGAGGGAAGCTTTGTTCCA+AGG | 0.510421 | 5.2:-62348088 | MS.gene99709:CDS |
| ATCCTGCCGGTAGTTTCATA+AGG | 0.510992 | 5.2:+62345561 | None:intergenic |
| CTTGGGCACCGGACCCTGGA+CGG | 0.524347 | 5.2:+62345625 | None:intergenic |
| GCTTATTCTCTCAATATGGA+AGG | 0.527328 | 5.2:-62348785 | MS.gene99709:CDS |
| AAATCTACAAATGCGATACC+TGG | 0.531054 | 5.2:+62345477 | None:intergenic |
| TCCAGGGTCCGGTGCCCAAG+AGG | 0.546064 | 5.2:-62345622 | MS.gene99709:CDS |
| AGCAGGCCTCATTCCGTCCA+GGG | 0.559600 | 5.2:-62345638 | MS.gene99709:intron |
| CAATCTTCTGTGCCTAATGG+TGG | 0.560473 | 5.2:-62346168 | MS.gene99709:CDS |
| TGCCTTATGAAACTACCGGC+AGG | 0.562261 | 5.2:-62345563 | MS.gene99709:CDS |
| ATGGCAATGCAGGCTCTACA+AGG | 0.563519 | 5.2:-62345432 | MS.gene99709:CDS |
| TAAGCTTCGAGGACAGGCAT+GGG | 0.574433 | 5.2:-62348733 | MS.gene99709:CDS |
| CTAAGCTTCGAGGACAGGCA+TGG | 0.581122 | 5.2:-62348734 | MS.gene99709:CDS |
| GATTGTATTGCTAAAGAAGA+GGG | 0.592319 | 5.2:-62348104 | MS.gene99709:CDS |
| GAGCATTTCGAGCATCCTGC+CGG | 0.593424 | 5.2:+62345548 | None:intergenic |
| TTGTAGAGCCTGCATTGCCA+TGG | 0.596181 | 5.2:+62345434 | None:intergenic |
| AGCGCACTTCCTTAAAACCT+GGG | 0.597463 | 5.2:+62345514 | None:intergenic |
| GTGCCTAATGGTGGAACACA+TGG | 0.600600 | 5.2:-62346159 | MS.gene99709:CDS |
| ATGCTCTTCGAACAATACCC+AGG | 0.603681 | 5.2:-62345531 | MS.gene99709:CDS |
| AGATGAGGCACAATCATCCA+TGG | 0.621792 | 5.2:-62345451 | MS.gene99709:CDS |
| AATTTGCCTTATGAAACTAC+CGG | 0.623907 | 5.2:-62345567 | MS.gene99709:CDS |
| AATGAAAAGATCAAGAAAGA+CGG | 0.624809 | 5.2:-62350907 | MS.gene99709:intron |
| GGAACACATGGTGCAAGTAA+TGG | 0.626001 | 5.2:-62346147 | MS.gene99709:CDS |
| AGATTGTATTGCTAAAGAAG+AGG | 0.631624 | 5.2:-62348105 | MS.gene99709:CDS |
| ACCAGAGAGGATGCTTTCAG+GGG | 0.636302 | 5.2:-62350968 | None:intergenic |
| ACACATGGTGCAAGTAATGG+TGG | 0.721642 | 5.2:-62346144 | MS.gene99709:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGTAAATATTTATACATA+TGG | + | chr5.2:62346650-62346669 | None:intergenic | 10.0% |
| !!! | TGTATATACTTTATATTTTA+AGG | - | chr5.2:62349624-62349643 | MS.gene99709:intron | 10.0% |
| !! | AAATAATAATTCAAAAAGTG+AGG | + | chr5.2:62348347-62348366 | None:intergenic | 15.0% |
| !! | AAATTAATGTTTAGTACAAA+AGG | + | chr5.2:62348968-62348987 | None:intergenic | 15.0% |
| !! | ATATAACAGATCATATATAT+AGG | - | chr5.2:62346460-62346479 | MS.gene99709:intron | 15.0% |
| !! | ATGATATATCAAATAATTCT+TGG | + | chr5.2:62346675-62346694 | None:intergenic | 15.0% |
| !! | CAAAAATGATAGAAAATATT+AGG | - | chr5.2:62348494-62348513 | MS.gene99709:intron | 15.0% |
| !! | TAAAAAGTTAATGAAAATTG+TGG | - | chr5.2:62346247-62346266 | MS.gene99709:intron | 15.0% |
| !! | TAATAATCAACATAGATTAA+AGG | + | chr5.2:62350234-62350253 | None:intergenic | 15.0% |
| !! | TAGAAAAGTAAGAAAAAAAT+GGG | + | chr5.2:62345483-62345502 | None:intergenic | 15.0% |
| !! | TATAACAGATCATATATATA+GGG | - | chr5.2:62346461-62346480 | MS.gene99709:intron | 15.0% |
| !! | TATTAAACGTTGTTAAATAA+CGG | - | chr5.2:62350310-62350329 | MS.gene99709:intron | 15.0% |
| !!! | AAAATTTAGTTTAATTGAAC+TGG | - | chr5.2:62345724-62345743 | MS.gene99709:intron | 15.0% |
| !!! | AAATTTAGTTTAATTGAACT+GGG | - | chr5.2:62345725-62345744 | MS.gene99709:intron | 15.0% |
| !!! | CACTTTTTGAATTATTATTT+GGG | - | chr5.2:62348347-62348366 | MS.gene99709:intron | 15.0% |
| !!! | CTAATATTTTCTATCATTTT+TGG | + | chr5.2:62348496-62348515 | None:intergenic | 15.0% |
| !!! | TCACTTTTTGAATTATTATT+TGG | - | chr5.2:62348346-62348365 | MS.gene99709:intron | 15.0% |
| !!! | TGTTTTTTGTTGAATTATTA+GGG | - | chr5.2:62345623-62345642 | MS.gene99709:CDS | 15.0% |
| !! | ATAAATCATGTACACAAAAT+AGG | + | chr5.2:62349525-62349544 | None:intergenic | 20.0% |
| !! | ATACAAGTCCAATATATATA+TGG | + | chr5.2:62347352-62347371 | None:intergenic | 20.0% |
| !! | ATATATATATTGGACTTGTA+TGG | - | chr5.2:62347351-62347370 | MS.gene99709:intron | 20.0% |
| !! | ATATATCATTGTCATATGTA+CGG | - | chr5.2:62346686-62346705 | MS.gene99709:intron | 20.0% |
| !! | ATTGAGATTCTTAATGTAAA+TGG | + | chr5.2:62345414-62345433 | None:intergenic | 20.0% |
| !! | ATTTAACAAAATTAGAGAAG+AGG | + | chr5.2:62349153-62349172 | None:intergenic | 20.0% |
| !! | CATATTATAACAACATAGAT+TGG | - | chr5.2:62349797-62349816 | MS.gene99709:intron | 20.0% |
| !! | GTAGAAAAGTAAGAAAAAAA+TGG | + | chr5.2:62345484-62345503 | None:intergenic | 20.0% |
| !! | TAATATAACCAACAATAGAT+TGG | + | chr5.2:62346073-62346092 | None:intergenic | 20.0% |
| !! | TACAAGTCCAATATATATAT+GGG | + | chr5.2:62347351-62347370 | None:intergenic | 20.0% |
| !! | TCTATGAACAAAATATTGTT+GGG | + | chr5.2:62350750-62350769 | None:intergenic | 20.0% |
| !! | TGTATTACAAAATTCAATGT+TGG | - | chr5.2:62346601-62346620 | MS.gene99709:intron | 20.0% |
| !! | TTAATGTAAATGGTTTGATT+TGG | + | chr5.2:62345404-62345423 | None:intergenic | 20.0% |
| !! | TTAGCAAAGTTTATAATCAT+GGG | + | chr5.2:62350954-62350973 | None:intergenic | 20.0% |
| !!! | AAATTCATTATTTTGCAATG+TGG | - | chr5.2:62349409-62349428 | MS.gene99709:intron | 20.0% |
| !!! | AATAAGAACCTTTAATTTGA+TGG | - | chr5.2:62346283-62346302 | MS.gene99709:intron | 20.0% |
| !!! | ATATTATGTTTAGCTTTCTT+TGG | - | chr5.2:62347996-62348015 | MS.gene99709:intron | 20.0% |
| !!! | ATCATTGTATAACTTTTTAC+CGG | + | chr5.2:62346498-62346517 | None:intergenic | 20.0% |
| !!! | GCTTTTATGTATTATTCATA+AGG | - | chr5.2:62345813-62345832 | MS.gene99709:intron | 20.0% |
| !!! | GTGTTTTTTGTTGAATTATT+AGG | - | chr5.2:62345622-62345641 | MS.gene99709:CDS | 20.0% |
| !!! | TATGGTTAGAAATTTTAACT+GGG | - | chr5.2:62345596-62345615 | MS.gene99709:CDS | 20.0% |
| !!! | TTATGGTTAGAAATTTTAAC+TGG | - | chr5.2:62345595-62345614 | MS.gene99709:CDS | 20.0% |
| !!! | TTCTCTAATTTTGTTAAATG+TGG | - | chr5.2:62349154-62349173 | MS.gene99709:intron | 20.0% |
| !!! | TTGCTTTTTACTACTTTTTT+AGG | - | chr5.2:62345511-62345530 | MS.gene99709:CDS | 20.0% |
| ! | AAAAATAAGCCAATCCAAAT+GGG | - | chr5.2:62345953-62345972 | MS.gene99709:intron | 25.0% |
| ! | AATGAAAAGATCAAGAAAGA+CGG | - | chr5.2:62345431-62345450 | MS.gene99709:CDS | 25.0% |
| ! | ACAAGTCCAATATATATATG+GGG | + | chr5.2:62347350-62347369 | None:intergenic | 25.0% |
| ! | AGTATATCAGTGTAATACAT+GGG | - | chr5.2:62346540-62346559 | MS.gene99709:intron | 25.0% |
| ! | ATAAACTTTGCTAAGAAGTA+AGG | - | chr5.2:62350960-62350979 | MS.gene99709:CDS | 25.0% |
| ! | ATAATCCCTAATTTGAATGA+GGG | + | chr5.2:62349922-62349941 | None:intergenic | 25.0% |
| ! | ATATAACAGATCCTATATGT+AGG | - | chr5.2:62346516-62346535 | MS.gene99709:intron | 25.0% |
| ! | ATATGTTTCAATTTAACTCG+TGG | - | chr5.2:62350593-62350612 | MS.gene99709:intron | 25.0% |
| ! | ATTGAGAGTAATATAAGAAG+AGG | - | chr5.2:62348671-62348690 | MS.gene99709:CDS | 25.0% |
| ! | CAATTCAACCATCAAATTAA+AGG | + | chr5.2:62346294-62346313 | None:intergenic | 25.0% |
| ! | CAATTCACAACACTAAAATT+GGG | - | chr5.2:62350495-62350514 | MS.gene99709:intron | 25.0% |
| ! | CAGTATAACTTTAATACCAT+AGG | + | chr5.2:62347702-62347721 | None:intergenic | 25.0% |
| ! | CTCTATGAACAAAATATTGT+TGG | + | chr5.2:62350751-62350770 | None:intergenic | 25.0% |
| ! | CTTAGCAAAGTTTATAATCA+TGG | + | chr5.2:62350955-62350974 | None:intergenic | 25.0% |
| ! | GAAAAAAATGGGAATGTAAA+CGG | + | chr5.2:62345472-62345491 | None:intergenic | 25.0% |
| ! | GAATTCTTGGTTAAACATTA+TGG | - | chr5.2:62347896-62347915 | MS.gene99709:intron | 25.0% |
| ! | GCTTATTATGTATGAGAAAA+GGG | - | chr5.2:62345975-62345994 | MS.gene99709:intron | 25.0% |
| ! | GGTTGAATTGATGAAATTAA+GGG | - | chr5.2:62346304-62346323 | MS.gene99709:intron | 25.0% |
| ! | GTACACAAATTAACAGATAT+AGG | + | chr5.2:62347725-62347744 | None:intergenic | 25.0% |
| ! | TAAAAATAAGCCAATCCAAA+TGG | - | chr5.2:62345952-62345971 | MS.gene99709:intron | 25.0% |
| ! | TAATTTCTCTTAATGTCCAT+TGG | - | chr5.2:62347827-62347846 | MS.gene99709:intron | 25.0% |
| ! | TACAAAATTCAATGTTGGAT+GGG | - | chr5.2:62346606-62346625 | MS.gene99709:intron | 25.0% |
| ! | TACGTAATATTGTGAAATAG+CGG | - | chr5.2:62350407-62350426 | MS.gene99709:intron | 25.0% |
| ! | TATAACAGATCCTATATGTA+GGG | - | chr5.2:62346517-62346536 | MS.gene99709:intron | 25.0% |
| ! | TATATCATTGTCATATGTAC+GGG | - | chr5.2:62346687-62346706 | MS.gene99709:intron | 25.0% |
| ! | TATTAGAGAAACTATCAAGA+AGG | - | chr5.2:62346988-62347007 | MS.gene99709:intron | 25.0% |
| ! | TATTATTCATAAGGTTGTCA+AGG | - | chr5.2:62345822-62345841 | MS.gene99709:intron | 25.0% |
| ! | TATTGCTTATTCTCTCAATA+TGG | - | chr5.2:62347549-62347568 | MS.gene99709:intron | 25.0% |
| ! | TGGTTGAATTGATGAAATTA+AGG | - | chr5.2:62346303-62346322 | MS.gene99709:intron | 25.0% |
| ! | TTACAAAATTCAATGTTGGA+TGG | - | chr5.2:62346605-62346624 | MS.gene99709:intron | 25.0% |
| ! | TTCAAAGGGATAAATGATAA+TGG | + | chr5.2:62348392-62348411 | None:intergenic | 25.0% |
| ! | TTCTAATGAATGACTAGTAT+TGG | + | chr5.2:62348473-62348492 | None:intergenic | 25.0% |
| ! | TTGAGAGTAATATAAGAAGA+GGG | - | chr5.2:62348672-62348691 | MS.gene99709:CDS | 25.0% |
| !! | ACCATAGGTTTTTCATAAAA+TGG | + | chr5.2:62347687-62347706 | None:intergenic | 25.0% |
| !! | ATCATTGCATAACTTTTTAC+CGG | + | chr5.2:62346442-62346461 | None:intergenic | 25.0% |
| !! | CCATAGGTTTTTCATAAAAT+GGG | + | chr5.2:62347686-62347705 | None:intergenic | 25.0% |
| !! | CGTTAGTTTCTTTATTGAAT+TGG | - | chr5.2:62350068-62350087 | MS.gene99709:intron | 25.0% |
| !! | GTTTCTCTAATAGTTTTTGT+AGG | + | chr5.2:62346980-62346999 | None:intergenic | 25.0% |
| !! | TTATAATCATGGGATTTTGA+GGG | + | chr5.2:62350944-62350963 | None:intergenic | 25.0% |
| !! | TTGAATTATTAGGGTAGTTT+TGG | - | chr5.2:62345632-62345651 | MS.gene99709:CDS | 25.0% |
| !! | TTGCTCTTGATTTTTCATTT+CGG | - | chr5.2:62347377-62347396 | MS.gene99709:intron | 25.0% |
| !! | TTTATAATCATGGGATTTTG+AGG | + | chr5.2:62350945-62350964 | None:intergenic | 25.0% |
| !! | TTTCTACCATCTTTTCTAAT+AGG | + | chr5.2:62346857-62346876 | None:intergenic | 25.0% |
| !!! | ACTACTTTTTTAGGTTTCAA+CGG | - | chr5.2:62345520-62345539 | MS.gene99709:CDS | 25.0% |
| !!! | ATTTGTAGATTTTGAAGATG+AGG | - | chr5.2:62350872-62350891 | MS.gene99709:intron | 25.0% |
| !!! | TCGTTGAATAACTTTTTTAC+TGG | - | chr5.2:62346573-62346592 | MS.gene99709:intron | 25.0% |
| AAAAAGAAACAAGAGGAGAA+AGG | - | chr5.2:62348279-62348298 | MS.gene99709:intron | 30.0% | |
| AAAACGTGATAAAACACAAC+AGG | + | chr5.2:62347760-62347779 | None:intergenic | 30.0% | |
| AAACTCCCTCATTCAAATTA+GGG | - | chr5.2:62349914-62349933 | MS.gene99709:intron | 30.0% | |
| AAATGTACTCTTATATCAGC+AGG | - | chr5.2:62350683-62350702 | MS.gene99709:intron | 30.0% | |
| AACTTGCAAACAAAGACTAA+AGG | + | chr5.2:62348534-62348553 | None:intergenic | 30.0% | |
| AAGAATGAGAATGAAAGATG+TGG | - | chr5.2:62348058-62348077 | MS.gene99709:intron | 30.0% | |
| AATTTGCCTTATGAAACTAC+CGG | - | chr5.2:62350771-62350790 | MS.gene99709:intron | 30.0% | |
| AGATTGTATTGCTAAAGAAG+AGG | - | chr5.2:62348233-62348252 | MS.gene99709:intron | 30.0% | |
| AGTAATATAAGAAGAGGGAA+AGG | - | chr5.2:62348677-62348696 | MS.gene99709:CDS | 30.0% | |
| ATATTGTGAAATAGCGGTTA+TGG | - | chr5.2:62350413-62350432 | MS.gene99709:intron | 30.0% | |
| CAAAAATACGTCAATCCAAA+CGG | + | chr5.2:62345774-62345793 | None:intergenic | 30.0% | |
| GAAATGACAACATTAGAGAA+AGG | - | chr5.2:62346821-62346840 | MS.gene99709:intron | 30.0% | |
| GAGTATATCAGTGTAATACA+TGG | - | chr5.2:62346539-62346558 | MS.gene99709:intron | 30.0% | |
| GATAATCCCTAATTTGAATG+AGG | + | chr5.2:62349923-62349942 | None:intergenic | 30.0% | |
| GATTGTATTGCTAAAGAAGA+GGG | - | chr5.2:62348234-62348253 | MS.gene99709:intron | 30.0% | |
| GCAATTCACAACACTAAAAT+TGG | - | chr5.2:62350494-62350513 | MS.gene99709:intron | 30.0% | |
| GGCTTATTATGTATGAGAAA+AGG | - | chr5.2:62345974-62345993 | MS.gene99709:intron | 30.0% | |
| TAAACTCCCTCATTCAAATT+AGG | - | chr5.2:62349913-62349932 | MS.gene99709:intron | 30.0% | |
| TAACCAAGAATTCTTACAAG+CGG | + | chr5.2:62347889-62347908 | None:intergenic | 30.0% | |
| TCAAAAAGTGAGGATGATTA+TGG | + | chr5.2:62348337-62348356 | None:intergenic | 30.0% | |
| TCATACATAATAAGCCCATT+TGG | + | chr5.2:62345970-62345989 | None:intergenic | 30.0% | |
| TCTCTACTCAACAAATTATG+AGG | + | chr5.2:62349108-62349127 | None:intergenic | 30.0% | |
| TGGGTTAACTTAATAAGGTT+GGG | + | chr5.2:62349358-62349377 | None:intergenic | 30.0% | |
| TTAATCTTGACGTATGATAG+AGG | - | chr5.2:62347317-62347336 | MS.gene99709:intron | 30.0% | |
| TTGAATTGCCAATCTATTGT+TGG | - | chr5.2:62346062-62346081 | MS.gene99709:intron | 30.0% | |
| TTTGCAAGTTAGGAGATAAA+GGG | - | chr5.2:62348544-62348563 | MS.gene99709:intron | 30.0% | |
| ! | AATAGCAGTTTGTTCAAACT+CGG | + | chr5.2:62350463-62350482 | None:intergenic | 30.0% |
| ! | CAAAATTAGAGAAGAGGTAT+AGG | + | chr5.2:62349147-62349166 | None:intergenic | 30.0% |
| ! | CCCATTTTATGAAAAACCTA+TGG | - | chr5.2:62347683-62347702 | MS.gene99709:intron | 30.0% |
| ! | TATAATCATGGGATTTTGAG+GGG | + | chr5.2:62350943-62350962 | None:intergenic | 30.0% |
| ! | TATCATTTATCCCTTTGAAG+TGG | - | chr5.2:62348393-62348412 | MS.gene99709:intron | 30.0% |
| ! | TGCTCTTGATTTTTCATTTC+GGG | - | chr5.2:62347378-62347397 | MS.gene99709:intron | 30.0% |
| ! | TTAGTCTTTGTTTGCAAGTT+AGG | - | chr5.2:62348534-62348553 | MS.gene99709:intron | 30.0% |
| ! | TTGTTTTCGTATGAAGTTAC+GGG | - | chr5.2:62348113-62348132 | MS.gene99709:CDS | 30.0% |
| ! | TTTCAGAAGCATATCATTGA+TGG | + | chr5.2:62348161-62348180 | None:intergenic | 30.0% |
| ! | TTTTGAGCTAACCTATCATT+AGG | - | chr5.2:62349188-62349207 | MS.gene99709:intron | 30.0% |
| !! | ACTAGTGGGTTAACTTAATA+AGG | + | chr5.2:62349363-62349382 | None:intergenic | 30.0% |
| !! | ATATAGGGAGTATCTATATC+CGG | - | chr5.2:62346476-62346495 | MS.gene99709:intron | 30.0% |
| !! | ATGTAAATGGTTTGATTTGG+AGG | + | chr5.2:62345401-62345420 | None:intergenic | 30.0% |
| !! | CTTGTTTTCGTATGAAGTTA+CGG | - | chr5.2:62348112-62348131 | MS.gene99709:CDS | 30.0% |
| !! | TTATTTTATGAAGTCTCGCA+TGG | - | chr5.2:62346221-62346240 | MS.gene99709:intron | 30.0% |
| !! | TTGGTTCTGATTGGTTTATT+TGG | - | chr5.2:62349313-62349332 | MS.gene99709:intron | 30.0% |
| !! | TTTGAAATCTTTTGTCCTGT+TGG | - | chr5.2:62348019-62348038 | MS.gene99709:intron | 30.0% |
| !!! | GTAATTGGATTTTGTTTTGC+TGG | - | chr5.2:62347409-62347428 | MS.gene99709:intron | 30.0% |
| AAACAATCTTCTGTGCCTAA+TGG | - | chr5.2:62350167-62350186 | MS.gene99709:intron | 35.0% | |
| AAACTAGACTTAGGTGGTTT+GGG | - | chr5.2:62346874-62346893 | MS.gene99709:intron | 35.0% | |
| AAATCTACAAATGCGATACC+TGG | + | chr5.2:62350864-62350883 | None:intergenic | 35.0% | |
| AACACTAAAATTGGGTCATC+GGG | - | chr5.2:62350503-62350522 | MS.gene99709:intron | 35.0% | |
| AACAGACATTACCACTTCAA+AGG | + | chr5.2:62348407-62348426 | None:intergenic | 35.0% | |
| AAGGAAGAAGGAAAGAGAAA+TGG | + | chr5.2:62349953-62349972 | None:intergenic | 35.0% | |
| ACAAGATCAGAAAGTGATGA+TGG | + | chr5.2:62350034-62350053 | None:intergenic | 35.0% | |
| ACAGAATTCATGATGTCCAA+TGG | + | chr5.2:62347846-62347865 | None:intergenic | 35.0% | |
| ACAGACATTACCACTTCAAA+GGG | + | chr5.2:62348406-62348425 | None:intergenic | 35.0% | |
| ACAGCTTAACAGTTTATGTC+TGG | + | chr5.2:62349607-62349626 | None:intergenic | 35.0% | |
| ACATGAATTGAGAGAAGACT+TGG | + | chr5.2:62348737-62348756 | None:intergenic | 35.0% | |
| ACGTACTAAATAGCGTATCA+GGG | + | chr5.2:62350392-62350411 | None:intergenic | 35.0% | |
| ACTACAAAATCCCCCATATT+TGG | + | chr5.2:62349882-62349901 | None:intergenic | 35.0% | |
| AGATGGTAGAAACTAGACTT+AGG | - | chr5.2:62346865-62346884 | MS.gene99709:intron | 35.0% | |
| AGTCAAATCACTAGAGGTAA+GGG | - | chr5.2:62346950-62346969 | MS.gene99709:intron | 35.0% | |
| AGTTAGGAGAGTAGATTAGT+GGG | - | chr5.2:62346926-62346945 | MS.gene99709:intron | 35.0% | |
| ATAAGAAGAGGGAAAGGATA+TGG | - | chr5.2:62348683-62348702 | MS.gene99709:CDS | 35.0% | |
| ATATTGAACATACTGCCAAC+AGG | + | chr5.2:62348037-62348056 | None:intergenic | 35.0% | |
| ATTACGTTGCTTGAGAGTTA+TGG | - | chr5.2:62345578-62345597 | MS.gene99709:CDS | 35.0% | |
| ATTGTGCCTCATATATTGCT+TGG | - | chr5.2:62348895-62348914 | MS.gene99709:intron | 35.0% | |
| CAACACTAAAATTGGGTCAT+CGG | - | chr5.2:62350502-62350521 | MS.gene99709:intron | 35.0% | |
| CAACTGATATGCAACTAACA+TGG | - | chr5.2:62349262-62349281 | MS.gene99709:intron | 35.0% | |
| CAAGATCAGAAAGTGATGAT+GGG | + | chr5.2:62350033-62350052 | None:intergenic | 35.0% | |
| CATAATAAGCCCATTTGGAT+TGG | + | chr5.2:62345965-62345984 | None:intergenic | 35.0% | |
| CTAACTCCCAAAAAAACCTT+CGG | - | chr5.2:62348800-62348819 | MS.gene99709:CDS | 35.0% | |
| CTACAAAATCCCCCATATTT+GGG | + | chr5.2:62349881-62349900 | None:intergenic | 35.0% | |
| CTGATATACTCCCTACATAT+AGG | + | chr5.2:62346530-62346549 | None:intergenic | 35.0% | |
| GAACTCAAGAAATGTATTGG+AGG | + | chr5.2:62349857-62349876 | None:intergenic | 35.0% | |
| GAGGATGATTATGGTTTGAA+AGG | + | chr5.2:62348328-62348347 | None:intergenic | 35.0% | |
| GCATTTCTTAGTTGGACAAT+GGG | - | chr5.2:62345747-62345766 | MS.gene99709:intron | 35.0% | |
| GCTTATTCTCTCAATATGGA+AGG | - | chr5.2:62347553-62347572 | MS.gene99709:intron | 35.0% | |
| GGAGAAGAAAAAGAAACAAG+AGG | - | chr5.2:62348272-62348291 | MS.gene99709:intron | 35.0% | |
| GGATCTAGATATCTATGAGT+TGG | - | chr5.2:62347009-62347028 | MS.gene99709:intron | 35.0% | |
| GTAAACTCTATGCAATCTAG+AGG | + | chr5.2:62350287-62350306 | None:intergenic | 35.0% | |
| GTAGCACCTATTAGAAAAGA+TGG | - | chr5.2:62346848-62346867 | MS.gene99709:intron | 35.0% | |
| GTTCAACTGAACCATATTTC+TGG | - | chr5.2:62349289-62349308 | MS.gene99709:intron | 35.0% | |
| GTTTGCAAGTTAGGAGATAA+AGG | - | chr5.2:62348543-62348562 | MS.gene99709:intron | 35.0% | |
| GTTTGTTTGGGAGTTAAAGA+GGG | + | chr5.2:62349996-62350015 | None:intergenic | 35.0% | |
| TAACCACCAAGCAATATATG+AGG | + | chr5.2:62348904-62348923 | None:intergenic | 35.0% | |
| TACAAAATCCCCCATATTTG+GGG | + | chr5.2:62349880-62349899 | None:intergenic | 35.0% | |
| TACGTACTAAATAGCGTATC+AGG | + | chr5.2:62350393-62350412 | None:intergenic | 35.0% | |
| TAGTTAGGAGAGTAGATTAG+TGG | - | chr5.2:62346925-62346944 | MS.gene99709:intron | 35.0% | |
| TCAGAACCAAACCAGAAATA+TGG | + | chr5.2:62349303-62349322 | None:intergenic | 35.0% | |
| TCTAAAAACACACCCAAACA+AGG | + | chr5.2:62348609-62348628 | None:intergenic | 35.0% | |
| TCTTACAAGCGGCTATATTT+GGG | + | chr5.2:62347878-62347897 | None:intergenic | 35.0% | |
| TTCTTACAAGCGGCTATATT+TGG | + | chr5.2:62347879-62347898 | None:intergenic | 35.0% | |
| TTTGTTTGGGAGTTAAAGAG+GGG | + | chr5.2:62349995-62350014 | None:intergenic | 35.0% | |
| ! | AATGTATTGGAGGAAGCTTT+TGG | + | chr5.2:62349847-62349866 | None:intergenic | 35.0% |
| ! | ACTGAGCAGAATTAGTTCTT+TGG | + | chr5.2:62349241-62349260 | None:intergenic | 35.0% |
| ! | ATAGGTTAGCTCAAAAAGCT+TGG | + | chr5.2:62349184-62349203 | None:intergenic | 35.0% |
| ! | ATGACATGTTGACTACTAGT+GGG | + | chr5.2:62349377-62349396 | None:intergenic | 35.0% |
| ! | CATAACTTTTTACCGGATAC+AGG | + | chr5.2:62346435-62346454 | None:intergenic | 35.0% |
| ! | CTCTCAATATGGAAGGATTT+TGG | - | chr5.2:62347560-62347579 | MS.gene99709:intron | 35.0% |
| ! | CTCTTGATTTTTCATTTCGG+GGG | - | chr5.2:62347380-62347399 | MS.gene99709:intron | 35.0% |
| ! | GAGAAGACTTGGAAATGTTT+TGG | + | chr5.2:62348726-62348745 | None:intergenic | 35.0% |
| ! | GCATACTTAAGGGTTTGTTT+GGG | + | chr5.2:62350008-62350027 | None:intergenic | 35.0% |
| ! | GCTCTTGATTTTTCATTTCG+GGG | - | chr5.2:62347379-62347398 | MS.gene99709:intron | 35.0% |
| ! | GTGGGTTAACTTAATAAGGT+TGG | + | chr5.2:62349359-62349378 | None:intergenic | 35.0% |
| ! | TCTTGATTTTTCATTTCGGG+GGG | - | chr5.2:62347381-62347400 | MS.gene99709:intron | 35.0% |
| ! | TGGTTTTCGGTAGAACAATA+TGG | - | chr5.2:62347171-62347190 | MS.gene99709:intron | 35.0% |
| ! | TGTTTCTTTTTCTTCTCCCT+TGG | + | chr5.2:62348270-62348289 | None:intergenic | 35.0% |
| ! | TGTTTTCGTATGAAGTTACG+GGG | - | chr5.2:62348114-62348133 | MS.gene99709:CDS | 35.0% |
| ! | TTGGAGAAAGACATGGTTTT+CGG | - | chr5.2:62347028-62347047 | MS.gene99709:intron | 35.0% |
| ! | TTTTTGCTGGAGAGAAAATC+AGG | + | chr5.2:62350259-62350278 | None:intergenic | 35.0% |
| !! | AACTGTGAGTTTTGTGATAC+AGG | - | chr5.2:62346406-62346425 | MS.gene99709:intron | 35.0% |
| !! | ACTGAACCATATTTCTGGTT+TGG | - | chr5.2:62349294-62349313 | MS.gene99709:intron | 35.0% |
| !! | ATTTCTGGTTTGGTTCTGAT+TGG | - | chr5.2:62349304-62349323 | MS.gene99709:intron | 35.0% |
| !! | CCTAGTTTTCCATATTGTGT+GGG | + | chr5.2:62349499-62349518 | None:intergenic | 35.0% |
| !! | TGTTCTATTTGTTGTCGTTG+TGG | - | chr5.2:62347506-62347525 | MS.gene99709:intron | 35.0% |
| !!! | AATGCATCCGAAGGTTTTTT+TGG | + | chr5.2:62348810-62348829 | None:intergenic | 35.0% |
| !!! | ACATGGGGTGGATTTTTTTT+AGG | + | chr5.2:62349471-62349490 | None:intergenic | 35.0% |
| !!! | ATGCATCCGAAGGTTTTTTT+GGG | + | chr5.2:62348809-62348828 | None:intergenic | 35.0% |
| !!! | ATTTTGTTTTGCTGGTCTTG+GGG | - | chr5.2:62347417-62347436 | MS.gene99709:intron | 35.0% |
| !!! | GATTTTGTTTTGCTGGTCTT+GGG | - | chr5.2:62347416-62347435 | MS.gene99709:intron | 35.0% |
| !!! | GGTAGTTTTGGATTTGTGTT+AGG | - | chr5.2:62345644-62345663 | MS.gene99709:intron | 35.0% |
| !!! | TTGTTTGGGTGTGTTTTTAG+AGG | - | chr5.2:62348608-62348627 | MS.gene99709:intron | 35.0% |
| !!! | TTTTAGGTTTCAACGGTTCT+TGG | - | chr5.2:62345527-62345546 | MS.gene99709:CDS | 35.0% |
| AAGAGGAGAAAGGTGAAGAA+TGG | - | chr5.2:62348289-62348308 | MS.gene99709:intron | 40.0% | |
| AATTAAGCGTAGCAGAGATG+AGG | - | chr5.2:62346747-62346766 | MS.gene99709:intron | 40.0% | |
| ACAAAATCCCCCATATTTGG+GGG | + | chr5.2:62349879-62349898 | None:intergenic | 40.0% | |
| ACCAGAACAGACCTAATGAT+AGG | + | chr5.2:62349202-62349221 | None:intergenic | 40.0% | |
| ACCTATCATTAGGTCTGTTC+TGG | - | chr5.2:62349198-62349217 | MS.gene99709:intron | 40.0% | |
| AGGATGTTGCATACTTGCAT+TGG | - | chr5.2:62346767-62346786 | MS.gene99709:intron | 40.0% | |
| CACTAGTAGTCAACATGTCA+TGG | - | chr5.2:62349376-62349395 | MS.gene99709:intron | 40.0% | |
| CACTGTAAGATAACTTGAGC+AGG | + | chr5.2:62347790-62347809 | None:intergenic | 40.0% | |
| CCCACACAATATGGAAAACT+AGG | - | chr5.2:62349496-62349515 | MS.gene99709:intron | 40.0% | |
| CGAGACTAGTGATACAAACA+TGG | + | chr5.2:62350530-62350549 | None:intergenic | 40.0% | |
| CTCGGTCCCCATATATATAT+TGG | - | chr5.2:62347341-62347360 | MS.gene99709:intron | 40.0% | |
| GAAACTAGACTTAGGTGGTT+TGG | - | chr5.2:62346873-62346892 | MS.gene99709:intron | 40.0% | |
| GAGTCAAATCACTAGAGGTA+AGG | - | chr5.2:62346949-62346968 | MS.gene99709:intron | 40.0% | |
| GGCATTTCTTAGTTGGACAA+TGG | - | chr5.2:62345746-62345765 | MS.gene99709:intron | 40.0% | |
| GGGGAACTCAAGAAATGTAT+TGG | + | chr5.2:62349860-62349879 | None:intergenic | 40.0% | |
| GTGAGTATGTGAGAAAGAGA+GGG | - | chr5.2:62349062-62349081 | MS.gene99709:intron | 40.0% | |
| GTGTTGTGAATTGCAGATTG+TGG | + | chr5.2:62350488-62350507 | None:intergenic | 40.0% | |
| GTTAGGAGAGTAGATTAGTG+GGG | - | chr5.2:62346927-62346946 | MS.gene99709:intron | 40.0% | |
| TAGCCGCTTGTAAGAATTCT+TGG | - | chr5.2:62347883-62347902 | MS.gene99709:intron | 40.0% | |
| TCGAAGAGTAACTTTGAGCA+GGG | + | chr5.2:62346357-62346376 | None:intergenic | 40.0% | |
| TCTTGAGTTCCCCCAAATAT+GGG | - | chr5.2:62349867-62349886 | MS.gene99709:intron | 40.0% | |
| TGAACTGGGCATTTCTTAGT+TGG | - | chr5.2:62345739-62345758 | MS.gene99709:intron | 40.0% | |
| TGAGTATGTGAGAAAGAGAG+GGG | - | chr5.2:62349063-62349082 | MS.gene99709:intron | 40.0% | |
| TGATACAGGTATCCTGTATC+CGG | - | chr5.2:62346420-62346439 | MS.gene99709:intron | 40.0% | |
| TGCTTAGGGTAAAAGGAAGA+AGG | + | chr5.2:62349965-62349984 | None:intergenic | 40.0% | |
| TGGTAGAAACTAGACTTAGG+TGG | - | chr5.2:62346868-62346887 | MS.gene99709:intron | 40.0% | |
| TGTCATATGTACGGGACAAA+GGG | - | chr5.2:62346695-62346714 | MS.gene99709:intron | 40.0% | |
| TGTGAGTATGTGAGAAAGAG+AGG | - | chr5.2:62349061-62349080 | MS.gene99709:intron | 40.0% | |
| TTCTTGAGTTCCCCCAAATA+TGG | - | chr5.2:62349866-62349885 | MS.gene99709:intron | 40.0% | |
| TTGACGTATGATAGAGGACT+CGG | - | chr5.2:62347323-62347342 | MS.gene99709:intron | 40.0% | |
| TTGTCATATGTACGGGACAA+AGG | - | chr5.2:62346694-62346713 | MS.gene99709:intron | 40.0% | |
| TTGTGAAATAGCGGTTATGG+AGG | - | chr5.2:62350416-62350435 | MS.gene99709:intron | 40.0% | |
| TTTCGGGGGGATATTGTAAT+TGG | - | chr5.2:62347394-62347413 | MS.gene99709:intron | 40.0% | |
| ! | AGTTTTCCATATTGTGTGGG+AGG | + | chr5.2:62349496-62349515 | None:intergenic | 40.0% |
| ! | ATGATGGGAGGCATACTTAA+GGG | + | chr5.2:62350018-62350037 | None:intergenic | 40.0% |
| ! | CATGACATGTTGACTACTAG+TGG | + | chr5.2:62349378-62349397 | None:intergenic | 40.0% |
| ! | CGAACAATACCCAGGTTTTA+AGG | - | chr5.2:62350815-62350834 | MS.gene99709:intron | 40.0% |
| ! | CTATGAGTTGGAGAAAGACA+TGG | - | chr5.2:62347021-62347040 | MS.gene99709:intron | 40.0% |
| ! | GGCATACTTAAGGGTTTGTT+TGG | + | chr5.2:62350009-62350028 | None:intergenic | 40.0% |
| ! | GGTTTGTTTGGGAGTTAAAG+AGG | + | chr5.2:62349997-62350016 | None:intergenic | 40.0% |
| ! | GTTTTCCATATTGTGTGGGA+GGG | + | chr5.2:62349495-62349514 | None:intergenic | 40.0% |
| ! | TATTGGAGGAAGCTTTTGGA+GGG | + | chr5.2:62349843-62349862 | None:intergenic | 40.0% |
| ! | TCTAGAGGCAAAGTTTTTGC+TGG | + | chr5.2:62350272-62350291 | None:intergenic | 40.0% |
| ! | TGGGGGATTTTGTAGTATGA+AGG | - | chr5.2:62349886-62349905 | MS.gene99709:intron | 40.0% |
| ! | TGGTTTTCGGTAGAACACTA+TGG | - | chr5.2:62347041-62347060 | MS.gene99709:intron | 40.0% |
| !! | GCCTAGTTTTCCATATTGTG+TGG | + | chr5.2:62349500-62349519 | None:intergenic | 40.0% |
| !!! | AGGTTTTTTTGGGAGTTAGG+TGG | + | chr5.2:62348799-62348818 | None:intergenic | 40.0% |
| !!! | CGAAGGTTTTTTTGGGAGTT+AGG | + | chr5.2:62348802-62348821 | None:intergenic | 40.0% |
| !!! | GGATTTTGTTTTGCTGGTCT+TGG | - | chr5.2:62347415-62347434 | MS.gene99709:intron | 40.0% |
| !!! | GGGGTGGATTTTTTTTAGGT+GGG | + | chr5.2:62349467-62349486 | None:intergenic | 40.0% |
| !!! | GGGTGGATTTTTTTTAGGTG+GGG | + | chr5.2:62349466-62349485 | None:intergenic | 40.0% |
| !!! | GGTGGATTTTTTTTAGGTGG+GGG | + | chr5.2:62349465-62349484 | None:intergenic | 40.0% |
| !!! | TGGGGTGGATTTTTTTTAGG+TGG | + | chr5.2:62349468-62349487 | None:intergenic | 40.0% |
| !!! | TTTTGTTTTGCTGGTCTTGG+GGG | - | chr5.2:62347418-62347437 | MS.gene99709:intron | 40.0% |
| !!! | TTTTTTTTAGGTGGGGGATG+AGG | + | chr5.2:62349459-62349478 | None:intergenic | 40.0% |
| AAAGGGAGGTGAGAGCTTTA+GGG | - | chr5.2:62348561-62348580 | MS.gene99709:intron | 45.0% | |
| AAGCGCACTTCCTTAAAACC+TGG | + | chr5.2:62350828-62350847 | None:intergenic | 45.0% | |
| ACAATCATCCATGGCAATGC+AGG | - | chr5.2:62350896-62350915 | MS.gene99709:intron | 45.0% | |
| ACACATGGTGCAAGTAATGG+TGG | - | chr5.2:62350194-62350213 | MS.gene99709:intron | 45.0% | |
| AGATGAGGCACAATCATCCA+TGG | - | chr5.2:62350887-62350906 | MS.gene99709:intron | 45.0% | |
| AGCGCACTTCCTTAAAACCT+GGG | + | chr5.2:62350827-62350846 | None:intergenic | 45.0% | |
| ATATGTACGGGACAAAGGGT+TGG | - | chr5.2:62346699-62346718 | MS.gene99709:intron | 45.0% | |
| ATATTGTGTGGGAGGGAACA+TGG | + | chr5.2:62349488-62349507 | None:intergenic | 45.0% | |
| ATCCTGCCGGTAGTTTCATA+AGG | + | chr5.2:62350780-62350799 | None:intergenic | 45.0% | |
| ATGCTCTTCGAACAATACCC+AGG | - | chr5.2:62350807-62350826 | MS.gene99709:intron | 45.0% | |
| ATGTTCCCTCCCACACAATA+TGG | - | chr5.2:62349487-62349506 | MS.gene99709:intron | 45.0% | |
| CAAACTCGGCTACACAACAA+TGG | + | chr5.2:62350449-62350468 | None:intergenic | 45.0% | |
| CAATCTTCTGTGCCTAATGG+TGG | - | chr5.2:62350170-62350189 | MS.gene99709:intron | 45.0% | |
| CTCGAAGAGTAACTTTGAGC+AGG | + | chr5.2:62346358-62346377 | None:intergenic | 45.0% | |
| CTCTAGTTGCGAGTTTGTAG+TGG | - | chr5.2:62349655-62349674 | MS.gene99709:intron | 45.0% | |
| CTTGAGTTCCCCCAAATATG+GGG | - | chr5.2:62349868-62349887 | MS.gene99709:intron | 45.0% | |
| GAAAGGAAGATAGTTCCCCA+TGG | + | chr5.2:62348770-62348789 | None:intergenic | 45.0% | |
| GACAACATTAGAGAAAGGCG+AGG | - | chr5.2:62346826-62346845 | MS.gene99709:intron | 45.0% | |
| GATGTGTGGTAAGACTAGAC+TGG | - | chr5.2:62346789-62346808 | MS.gene99709:intron | 45.0% | |
| GCAAGTTAGGAGATAAAGGG+AGG | - | chr5.2:62348547-62348566 | MS.gene99709:intron | 45.0% | |
| GCATACTTGCATTGGATGTG+TGG | - | chr5.2:62346775-62346794 | MS.gene99709:intron | 45.0% | |
| GGAACACATGGTGCAAGTAA+TGG | - | chr5.2:62350191-62350210 | MS.gene99709:intron | 45.0% | |
| GTGCCTCATATATTGCTTGG+TGG | - | chr5.2:62348898-62348917 | MS.gene99709:intron | 45.0% | |
| TAAAGGGAGGTGAGAGCTTT+AGG | - | chr5.2:62348560-62348579 | MS.gene99709:intron | 45.0% | |
| TAACGGCTACAGTAGTGCTA+TGG | - | chr5.2:62350327-62350346 | MS.gene99709:intron | 45.0% | |
| TATGTGAGAAAGAGAGGGGA+GGG | - | chr5.2:62349067-62349086 | MS.gene99709:intron | 45.0% | |
| TATTGTGTGGGAGGGAACAT+GGG | + | chr5.2:62349487-62349506 | None:intergenic | 45.0% | |
| TCTGCACAGCTGAGAAAAAG+AGG | - | chr5.2:62350129-62350148 | MS.gene99709:intron | 45.0% | |
| TTGAGTTCCCCCAAATATGG+GGG | - | chr5.2:62349869-62349888 | MS.gene99709:intron | 45.0% | |
| ! | GTATTGGAGGAAGCTTTTGG+AGG | + | chr5.2:62349844-62349863 | None:intergenic | 45.0% |
| ! | TAAGCCTTATCCCACCAAGT+GGG | + | chr5.2:62347091-62347110 | None:intergenic | 45.0% |
| ! | TCATGTTCGAGTTCCTCCAT+GGG | - | chr5.2:62348751-62348770 | MS.gene99709:CDS | 45.0% |
| ! | TGTGTCTGAAATGCATCCGA+AGG | + | chr5.2:62348819-62348838 | None:intergenic | 45.0% |
| ! | TTCATGTTCGAGTTCCTCCA+TGG | - | chr5.2:62348750-62348769 | MS.gene99709:CDS | 45.0% |
| !! | AAGAGGGAAGCTTTGTTCCA+AGG | - | chr5.2:62348250-62348269 | MS.gene99709:intron | 45.0% |
| !! | AGAGGGAAGCTTTGTTCCAA+GGG | - | chr5.2:62348251-62348270 | MS.gene99709:intron | 45.0% |
| !! | AGGAGAGTGCTTAGGGTAAA+AGG | + | chr5.2:62349972-62349991 | None:intergenic | 45.0% |
| !! | GATCAGAAAGTGATGATGGG+AGG | + | chr5.2:62350030-62350049 | None:intergenic | 45.0% |
| !! | GATGATGGGAGGCATACTTA+AGG | + | chr5.2:62350019-62350038 | None:intergenic | 45.0% |
| AAACACACCCAAACAAGGCG+AGG | + | chr5.2:62348604-62348623 | None:intergenic | 50.0% | |
| AGGAAGATAGTTCCCCATGG+AGG | + | chr5.2:62348767-62348786 | None:intergenic | 50.0% | |
| AGTTGGACAATGGGTCCGTT+TGG | - | chr5.2:62345756-62345775 | MS.gene99709:intron | 50.0% | |
| ATGGCAATGCAGGCTCTACA+AGG | - | chr5.2:62350906-62350925 | MS.gene99709:intron | 50.0% | |
| ATTGTGTGGGAGGGAACATG+GGG | + | chr5.2:62349486-62349505 | None:intergenic | 50.0% | |
| CATCTGTCGCACTGCATTAC+TGG | + | chr5.2:62347655-62347674 | None:intergenic | 50.0% | |
| CTAAAGACGCCTAAGCTTCG+AGG | - | chr5.2:62347594-62347613 | MS.gene99709:intron | 50.0% | |
| GAGTTAGGTGGAGACAGGAA+AGG | + | chr5.2:62348787-62348806 | None:intergenic | 50.0% | |
| GCACCATGTGTTCCACCATT+AGG | + | chr5.2:62350185-62350204 | None:intergenic | 50.0% | |
| GCATGTAGAGAGAAGACCTG+GGG | - | chr5.2:62346896-62346915 | MS.gene99709:intron | 50.0% | |
| GCTATGGCGCTATTGCATAG+CGG | - | chr5.2:62350343-62350362 | MS.gene99709:intron | 50.0% | |
| GGCATGTAGAGAGAAGACCT+GGG | - | chr5.2:62346895-62346914 | MS.gene99709:intron | 50.0% | |
| GTATGTGAGAAAGAGAGGGG+AGG | - | chr5.2:62349066-62349085 | MS.gene99709:intron | 50.0% | |
| GTGGGGAGTCAAATCACTAG+AGG | - | chr5.2:62346944-62346963 | MS.gene99709:intron | 50.0% | |
| GTTTGGGAGTTAAAGAGGGG+AGG | + | chr5.2:62349992-62350011 | None:intergenic | 50.0% | |
| TAAGCTTCGAGGACAGGCAT+GGG | - | chr5.2:62347605-62347624 | MS.gene99709:intron | 50.0% | |
| TGCCTTATGAAACTACCGGC+AGG | - | chr5.2:62350775-62350794 | MS.gene99709:intron | 50.0% | |
| TTAGAGGTGAGCAGTCGAGA+AGG | - | chr5.2:62348624-62348643 | MS.gene99709:intron | 50.0% | |
| TTGTAGAGCCTGCATTGCCA+TGG | + | chr5.2:62350907-62350926 | None:intergenic | 50.0% | |
| TTTGGGAGTTAGGTGGAGAC+AGG | + | chr5.2:62348792-62348811 | None:intergenic | 50.0% | |
| ! | AAGCCTTATCCCACCAAGTG+GGG | + | chr5.2:62347090-62347109 | None:intergenic | 50.0% |
| ! | CAAGCCTTATCCCACCAAGT+GGG | + | chr5.2:62347221-62347240 | None:intergenic | 50.0% |
| ! | CATGTTCGAGTTCCTCCATG+GGG | - | chr5.2:62348752-62348771 | MS.gene99709:CDS | 50.0% |
| ! | GTAAGCCTTATCCCACCAAG+TGG | + | chr5.2:62347092-62347111 | None:intergenic | 50.0% |
| ! | GTGCCTAATGGTGGAACACA+TGG | - | chr5.2:62350179-62350198 | MS.gene99709:intron | 50.0% |
| !! | AGAGCTTTAGGGAGAGACGA+GGG | - | chr5.2:62348572-62348591 | MS.gene99709:intron | 50.0% |
| !! | GGGAATACCTCGCCTTGTTT+GGG | - | chr5.2:62348594-62348613 | MS.gene99709:intron | 50.0% |
| AAAGAGAGGGGAGGGAAGAG+GGG | - | chr5.2:62349075-62349094 | MS.gene99709:intron | 55.0% | |
| AGAAAGAGAGGGGAGGGAAG+AGG | - | chr5.2:62349073-62349092 | MS.gene99709:intron | 55.0% | |
| CATGCCTGTCCTCGAAGCTT+AGG | + | chr5.2:62347606-62347625 | None:intergenic | 55.0% | |
| CGCTTGATCGAAGCAAAGCC+AGG | - | chr5.2:62350843-62350862 | MS.gene99709:intron | 55.0% | |
| CTAAGCTTCGAGGACAGGCA+TGG | - | chr5.2:62347604-62347623 | MS.gene99709:intron | 55.0% | |
| CTCCTAACTACAGCATCCCC+AGG | + | chr5.2:62346915-62346934 | None:intergenic | 55.0% | |
| CTTATCCCACCAAGTGGGGT+CGG | + | chr5.2:62347086-62347105 | None:intergenic | 55.0% | |
| GAAAGAGAGGGGAGGGAAGA+GGG | - | chr5.2:62349074-62349093 | MS.gene99709:intron | 55.0% | |
| GACCTGGGGATGCTGTAGTT+AGG | - | chr5.2:62346910-62346929 | MS.gene99709:intron | 55.0% | |
| GAGCATTTCGAGCATCCTGC+CGG | + | chr5.2:62350793-62350812 | None:intergenic | 55.0% | |
| GGGCATGTAGAGAGAAGACC+TGG | - | chr5.2:62346894-62346913 | MS.gene99709:intron | 55.0% | |
| GTACGGGACAAAGGGTTGGA+CGG | - | chr5.2:62346703-62346722 | MS.gene99709:intron | 55.0% | |
| GTGGGGGATGAGGAAACTGA+TGG | + | chr5.2:62349449-62349468 | None:intergenic | 55.0% | |
| TCGAGAAGGAGGCTTACGAG+TGG | - | chr5.2:62348638-62348657 | MS.gene99709:intron | 55.0% | |
| TGTATGTAGCCGACCCCACT+TGG | - | chr5.2:62347074-62347093 | MS.gene99709:intron | 55.0% | |
| TTTGGGGGGAGGGAAGTAGA+GGG | - | chr5.2:62349683-62349702 | MS.gene99709:intron | 55.0% | |
| ! | CCAAGCCTTATCCCACCAAG+TGG | + | chr5.2:62347222-62347241 | None:intergenic | 55.0% |
| ! | CCACTTGGTGGGATAAGGCT+TGG | - | chr5.2:62347089-62347108 | MS.gene99709:intron | 55.0% |
| ! | GGGGAATACCTCGCCTTGTT+TGG | - | chr5.2:62348593-62348612 | MS.gene99709:intron | 55.0% |
| !! | AAGAGGGGAGGAGAGTGCTT+AGG | + | chr5.2:62349980-62349999 | None:intergenic | 55.0% |
| !! | AGAGGGGAGGAGAGTGCTTA+GGG | + | chr5.2:62349979-62349998 | None:intergenic | 55.0% |
| !! | AGCTTTAGGGAGAGACGAGG+GGG | - | chr5.2:62348574-62348593 | MS.gene99709:intron | 55.0% |
| !! | GAGAGCTTTAGGGAGAGACG+AGG | - | chr5.2:62348571-62348590 | MS.gene99709:intron | 55.0% |
| !! | GAGCTTTAGGGAGAGACGAG+GGG | - | chr5.2:62348573-62348592 | MS.gene99709:intron | 55.0% |
| AGCAGGCCTCATTCCGTCCA+GGG | - | chr5.2:62350700-62350719 | MS.gene99709:intron | 60.0% | |
| ATGTAGCCGACCCCACTTGG+TGG | - | chr5.2:62347077-62347096 | MS.gene99709:intron | 60.0% | |
| GACGCCTAAGCTTCGAGGAC+AGG | - | chr5.2:62347599-62347618 | MS.gene99709:intron | 60.0% | |
| GAGGTGAGCAGTCGAGAAGG+AGG | - | chr5.2:62348627-62348646 | MS.gene99709:intron | 60.0% | |
| GTTGGGAGCAGCTGCCTCTT+GGG | + | chr5.2:62350733-62350752 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCACTTGGT+GGG | - | chr5.2:62347078-62347097 | MS.gene99709:intron | 60.0% | |
| TGTTGGGAGCAGCTGCCTCT+TGG | + | chr5.2:62350734-62350753 | None:intergenic | 60.0% | |
| ! | CGACCCCACTTGGTGGGATA+AGG | - | chr5.2:62347084-62347103 | MS.gene99709:intron | 60.0% |
| ! | CTTTGGGGGGAGGGAAGTAG+AGG | - | chr5.2:62349682-62349701 | MS.gene99709:intron | 60.0% |
| ACCGGACCCTGGACGGAATG+AGG | + | chr5.2:62350709-62350728 | None:intergenic | 65.0% | |
| AGCAGCTGCCTCTTGGGCAC+CGG | + | chr5.2:62350727-62350746 | None:intergenic | 65.0% | |
| CAGCAGGCCTCATTCCGTCC+AGG | - | chr5.2:62350699-62350718 | MS.gene99709:intron | 65.0% | |
| GCCTCATTCCGTCCAGGGTC+CGG | - | chr5.2:62350705-62350724 | MS.gene99709:intron | 65.0% | |
| GTGTGGGAGGGAACATGGGG+TGG | + | chr5.2:62349483-62349502 | None:intergenic | 65.0% | |
| TCCAGGGTCCGGTGCCCAAG+AGG | - | chr5.2:62350716-62350735 | MS.gene99709:intron | 70.0% | |
| !! | CTTGGGCACCGGACCCTGGA+CGG | + | chr5.2:62350716-62350735 | None:intergenic | 70.0% |
| !! | GCCTCTTGGGCACCGGACCC+TGG | + | chr5.2:62350720-62350739 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 62345380 | 62350980 | 62345380 | ID=MS.gene99709 |
| chr5.2 | mRNA | 62345380 | 62350980 | 62345380 | ID=MS.gene99709.t1;Parent=MS.gene99709 |
| chr5.2 | exon | 62350908 | 62350980 | 62350908 | ID=MS.gene99709.t1.exon1;Parent=MS.gene99709.t1 |
| chr5.2 | CDS | 62350908 | 62350980 | 62350908 | ID=cds.MS.gene99709.t1;Parent=MS.gene99709.t1 |
| chr5.2 | exon | 62348656 | 62348828 | 62348656 | ID=MS.gene99709.t1.exon2;Parent=MS.gene99709.t1 |
| chr5.2 | CDS | 62348656 | 62348828 | 62348656 | ID=cds.MS.gene99709.t1;Parent=MS.gene99709.t1 |
| chr5.2 | exon | 62348060 | 62348153 | 62348060 | ID=MS.gene99709.t1.exon3;Parent=MS.gene99709.t1 |
| chr5.2 | CDS | 62348060 | 62348153 | 62348060 | ID=cds.MS.gene99709.t1;Parent=MS.gene99709.t1 |
| chr5.2 | exon | 62346137 | 62346222 | 62346137 | ID=MS.gene99709.t1.exon4;Parent=MS.gene99709.t1 |
| chr5.2 | CDS | 62346137 | 62346222 | 62346137 | ID=cds.MS.gene99709.t1;Parent=MS.gene99709.t1 |
| chr5.2 | exon | 62345380 | 62345655 | 62345380 | ID=MS.gene99709.t1.exon5;Parent=MS.gene99709.t1 |
| chr5.2 | CDS | 62345380 | 62345655 | 62345380 | ID=cds.MS.gene99709.t1;Parent=MS.gene99709.t1 |
| Gene Sequence |
| Protein sequence |
