Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69612.t1 | AES95696.1 | 84.7 | 543 | 64 | 3 | 1 | 539 | 62 | 589 | 1.50E-256 | 895.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69612.t1 | Q9M084 | 64.3 | 498 | 168 | 2 | 52 | 539 | 61 | 558 | 8.5e-184 | 644.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69612.t1 | G7KAW8 | 84.7 | 543 | 64 | 3 | 1 | 539 | 62 | 589 | 1.1e-256 | 895.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69612.t1 | MTR_5g028360 | 88.398 | 543 | 44 | 3 | 1 | 539 | 62 | 589 | 0.0 | 972 |
| MS.gene69612.t1 | MTR_1g014140 | 74.122 | 541 | 138 | 1 | 1 | 539 | 1 | 541 | 0.0 | 818 |
| MS.gene69612.t1 | MTR_4g100920 | 25.145 | 517 | 295 | 19 | 65 | 534 | 70 | 541 | 8.52e-33 | 132 |
| MS.gene69612.t1 | MTR_8g102050 | 30.605 | 281 | 175 | 8 | 269 | 536 | 275 | 548 | 7.40e-27 | 114 |
| MS.gene69612.t1 | MTR_7g101050 | 31.970 | 269 | 163 | 10 | 282 | 536 | 311 | 573 | 6.61e-26 | 112 |
| MS.gene69612.t1 | MTR_2g036600 | 22.245 | 481 | 321 | 16 | 91 | 531 | 121 | 588 | 2.00e-14 | 76.6 |
| MS.gene69612.t1 | MTR_4g127790 | 23.464 | 358 | 236 | 12 | 207 | 530 | 32 | 385 | 6.24e-12 | 67.8 |
| MS.gene69612.t1 | MTR_4g052070 | 26.295 | 251 | 162 | 8 | 88 | 331 | 70 | 304 | 2.35e-11 | 67.0 |
| MS.gene69612.t1 | MTR_8g104740 | 27.857 | 280 | 173 | 12 | 61 | 331 | 57 | 316 | 5.65e-11 | 65.5 |
| MS.gene69612.t1 | MTR_8g104740 | 27.857 | 280 | 173 | 12 | 61 | 331 | 57 | 316 | 7.38e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69612.t1 | AT4G31180 | 63.056 | 517 | 181 | 2 | 33 | 539 | 42 | 558 | 0.0 | 675 |
| MS.gene69612.t1 | AT4G31180 | 63.056 | 517 | 181 | 2 | 33 | 539 | 42 | 558 | 0.0 | 675 |
| MS.gene69612.t1 | AT4G26870 | 61.822 | 516 | 191 | 4 | 25 | 539 | 22 | 532 | 0.0 | 646 |
| MS.gene69612.t1 | AT4G17300 | 25.352 | 497 | 283 | 16 | 86 | 534 | 106 | 562 | 1.50e-30 | 125 |
| MS.gene69612.t1 | AT4G17300 | 25.352 | 497 | 283 | 16 | 86 | 534 | 126 | 582 | 1.61e-30 | 126 |
| MS.gene69612.t1 | AT5G56680 | 29.603 | 277 | 175 | 8 | 273 | 536 | 300 | 569 | 8.06e-28 | 117 |
| MS.gene69612.t1 | AT1G70980 | 29.710 | 276 | 172 | 8 | 276 | 536 | 300 | 568 | 1.38e-25 | 111 |
| MS.gene69612.t1 | AT3G07420 | 23.792 | 269 | 191 | 8 | 273 | 532 | 368 | 631 | 2.23e-11 | 67.0 |
Find 121 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGATACTTCTTACATTTC+TGG | 0.087614 | 5.3:-17548156 | None:intergenic |
| CTTATTACATTGATGCTTTC+AGG | 0.115749 | 5.3:+17549559 | MS.gene69612:CDS |
| CACACTCCAAAGTTGATTAA+TGG | 0.180357 | 5.3:+17547765 | MS.gene69612:CDS |
| TTCTAGAAGCATCCTCTATT+TGG | 0.181059 | 5.3:-17547152 | None:intergenic |
| GCACGTTCTTCTAACAATTT+TGG | 0.230009 | 5.3:-17549504 | None:intergenic |
| GACCCCTTAGCCACCAATTA+TGG | 0.254007 | 5.3:+17546625 | MS.gene69612:CDS |
| ATTCCGGCTACTCCTATTAA+AGG | 0.274375 | 5.3:+17546937 | MS.gene69612:CDS |
| TATTTCCACGTGACCCAAAA+AGG | 0.306266 | 5.3:+17549820 | MS.gene69612:CDS |
| TAATGGGATGTTGCCATAAT+TGG | 0.313034 | 5.3:-17546638 | None:intergenic |
| AGGCATCTGTGTGAGTTTAC+TGG | 0.353312 | 5.3:+17547951 | MS.gene69612:CDS |
| TTAGGTGAGGAGATAATTTC+AGG | 0.358661 | 5.3:+17549462 | MS.gene69612:intron |
| AAGTGCTTTGACCTGGGTCC+GGG | 0.362290 | 5.3:-17546698 | None:intergenic |
| TTGGATTGGAGCTCCTCTAA+TGG | 0.364039 | 5.3:-17546655 | None:intergenic |
| TGCTGAGTGGTGCCTTTAAT+AGG | 0.368885 | 5.3:-17546949 | None:intergenic |
| CAAGTGCTTTGACCTGGGTC+CGG | 0.371135 | 5.3:-17546699 | None:intergenic |
| CGGAAAATTCCTTGATTAGC+TGG | 0.377962 | 5.3:-17547481 | None:intergenic |
| GACGGGATGGACCGGTGTCT+TGG | 0.378797 | 5.3:-17546674 | None:intergenic |
| TGGTGGCTTTGGCGCAGGCT+TGG | 0.380508 | 5.3:+17549746 | MS.gene69612:CDS |
| TCATGGCGTTGTTTCCATTC+CGG | 0.380729 | 5.3:+17546921 | MS.gene69612:CDS |
| ATCTGCTCACTCACTGAATC+AGG | 0.382002 | 5.3:-17546853 | None:intergenic |
| ACCGATACCCTTTGGCCATA+AGG | 0.383226 | 5.3:+17549195 | MS.gene69612:CDS |
| GCACCACTGCATGGTGGCTT+TGG | 0.390476 | 5.3:+17549735 | MS.gene69612:CDS |
| CTAGATCCATTAATCAACTT+TGG | 0.392041 | 5.3:-17547771 | None:intergenic |
| ACAACTTGTTCGTGTGAATC+AGG | 0.394922 | 5.3:+17547420 | MS.gene69612:CDS |
| CTCTATTTGGAAGGGTAAAA+CGG | 0.398471 | 5.3:-17547139 | None:intergenic |
| TGGTGCAGGCTCTTTGCACT+CGG | 0.398760 | 5.3:-17546482 | None:intergenic |
| CAAAGGGCATCCTGCATGCC+TGG | 0.401678 | 5.3:+17547827 | MS.gene69612:CDS |
| CTGCATGGTGGCTTTGGCGC+AGG | 0.403327 | 5.3:+17549741 | MS.gene69612:CDS |
| GAGTCTGTGGTGGACGTTCA+TGG | 0.408170 | 5.3:+17546904 | MS.gene69612:CDS |
| AGCATCAATGTAATAAGATA+TGG | 0.416066 | 5.3:-17549553 | None:intergenic |
| TATCCTTCACCGATACCCTT+TGG | 0.424104 | 5.3:+17549187 | MS.gene69612:CDS |
| TTATGGCAACATCCCATTAG+AGG | 0.429972 | 5.3:+17546642 | MS.gene69612:CDS |
| TGGATTGGAGCTCCTCTAAT+GGG | 0.435677 | 5.3:-17546654 | None:intergenic |
| CGGCCATTTGTTGCCGATGT+CGG | 0.439008 | 5.3:-17546567 | None:intergenic |
| CATTGTATAGAACGGCCTTA+TGG | 0.447659 | 5.3:-17549210 | None:intergenic |
| GACGATGATGGTGCTGGTGC+AGG | 0.454321 | 5.3:-17546496 | None:intergenic |
| GGAGTAGAAATTGAGCCTTT+TGG | 0.454350 | 5.3:+17549002 | MS.gene69612:CDS |
| TGAATATGACAGGGCCAGTC+AGG | 0.454741 | 5.3:+17547182 | MS.gene69612:CDS |
| TCTATTTGGAAGGGTAAAAC+GGG | 0.465770 | 5.3:-17547138 | None:intergenic |
| GATGGACCGGTGTCTTGGAT+TGG | 0.465944 | 5.3:-17546669 | None:intergenic |
| GTGAATTGAAATGAAGTCTT+CGG | 0.483974 | 5.3:-17547745 | None:intergenic |
| TATTAAAGGCACCACTCAGC+AGG | 0.490348 | 5.3:+17546951 | MS.gene69612:CDS |
| CTAAATTGTATTGTGTGAGT+AGG | 0.490707 | 5.3:+17547109 | MS.gene69612:CDS |
| AGTGCTTTGACCTGGGTCCG+GGG | 0.493434 | 5.3:-17546697 | None:intergenic |
| GCTCCGACATCGGCAACAAA+TGG | 0.503015 | 5.3:+17546564 | MS.gene69612:CDS |
| TTGCCATAATTGGTGGCTAA+GGG | 0.506950 | 5.3:-17546628 | None:intergenic |
| GTACCTTTAGCGGTTCGAAT+GGG | 0.507990 | 5.3:-17548198 | None:intergenic |
| AATAATTCAGTTAGAATTCG+AGG | 0.508512 | 5.3:+17546736 | MS.gene69612:CDS |
| ATGTCGGAGCTTTACCAGCT+TGG | 0.509633 | 5.3:-17546551 | None:intergenic |
| ACCTCAACTTCACAAGCAAA+TGG | 0.513847 | 5.3:+17547857 | MS.gene69612:CDS |
| GAAGTGAAGCTGAATATGAC+AGG | 0.516656 | 5.3:+17547172 | MS.gene69612:CDS |
| AATCGTCAAGTGCTTTGACC+TGG | 0.518195 | 5.3:-17546705 | None:intergenic |
| GCGCCAAAGCCACCATGCAG+TGG | 0.521064 | 5.3:-17549738 | None:intergenic |
| GATTGACTGCCACTATTTCG+AGG | 0.521814 | 5.3:+17547992 | MS.gene69612:CDS |
| ATCGTCAAGTGCTTTGACCT+GGG | 0.521979 | 5.3:-17546704 | None:intergenic |
| CTTCAACATTATCCGCAATA+CGG | 0.524897 | 5.3:-17547501 | None:intergenic |
| AGTACCTTTAGCGGTTCGAA+TGG | 0.527085 | 5.3:-17548199 | None:intergenic |
| CACCGGTCCATCCCGTCCCC+CGG | 0.527914 | 5.3:+17546680 | MS.gene69612:CDS |
| TCGGAGCTTTACCAGCTTGG+CGG | 0.531299 | 5.3:-17546548 | None:intergenic |
| TTGCAAACACCAGCTAATCA+AGG | 0.532269 | 5.3:+17547472 | MS.gene69612:CDS |
| AACGCCATCTTCTTACTCAC+TGG | 0.532690 | 5.3:-17546778 | None:intergenic |
| GCCTTATGGCCAAAGGGTAT+CGG | 0.533082 | 5.3:-17549196 | None:intergenic |
| TCAGTATTCAAGTCACCAAA+AGG | 0.536741 | 5.3:-17549017 | None:intergenic |
| GTTGCCATAATTGGTGGCTA+AGG | 0.537422 | 5.3:-17546629 | None:intergenic |
| GAAGTTGAGGTGACTGAGCC+AGG | 0.538658 | 5.3:-17547845 | None:intergenic |
| ACAGATATACCTCGAAATAG+TGG | 0.539941 | 5.3:-17548001 | None:intergenic |
| CAGAGGATTCCTTTACTCAC+AGG | 0.542220 | 5.3:+17547931 | MS.gene69612:CDS |
| GGTGCAGGCTCTTTGCACTC+GGG | 0.544258 | 5.3:-17546481 | None:intergenic |
| ACACAGATGCCTGTGAGTAA+AGG | 0.545161 | 5.3:-17547940 | None:intergenic |
| GCCATTTGCTTGTGAAGTTG+AGG | 0.546111 | 5.3:-17547858 | None:intergenic |
| AGAAGCATCCTCTATTTGGA+AGG | 0.546640 | 5.3:-17547148 | None:intergenic |
| TAAATTGTATTGTGTGAGTA+GGG | 0.550079 | 5.3:+17547110 | MS.gene69612:CDS |
| CTGCGGCTTACATACGAAGA+AGG | 0.554330 | 5.3:+17548449 | MS.gene69612:CDS |
| CAAAGCACTTGACGATTCAC+TGG | 0.554919 | 5.3:+17546711 | MS.gene69612:CDS |
| AGCTCTCAGCCGTGAGTCTG+TGG | 0.557460 | 5.3:+17546891 | MS.gene69612:CDS |
| TGGCCAAAGGGTATCGGTGA+AGG | 0.560167 | 5.3:-17549190 | None:intergenic |
| GGTGACTGAGCCAGGCATGC+AGG | 0.560588 | 5.3:-17547837 | None:intergenic |
| TTTAATAGGAGTAGCCGGAA+TGG | 0.564133 | 5.3:-17546935 | None:intergenic |
| ATTGTTAGAAGAACGTGCAC+AGG | 0.565590 | 5.3:+17549509 | MS.gene69612:CDS |
| AGCTGGTAAAGCTCCGACAT+CGG | 0.569312 | 5.3:+17546554 | MS.gene69612:CDS |
| GTACCCATTCGAACCGCTAA+AGG | 0.573542 | 5.3:+17548195 | MS.gene69612:CDS |
| ACTGAAGCTGAAAGGAAACT+AGG | 0.576789 | 5.3:+17549035 | MS.gene69612:CDS |
| GTCGGTGCAATGTACCTGAC+TGG | 0.577872 | 5.3:-17547196 | None:intergenic |
| CACAAGCAAATGGCAATATG+TGG | 0.581777 | 5.3:+17547867 | MS.gene69612:CDS |
| TCTGATGATTCCGACGATGA+TGG | 0.583276 | 5.3:-17546508 | None:intergenic |
| GTGCCTTTAATAGGAGTAGC+CGG | 0.584656 | 5.3:-17546940 | None:intergenic |
| GTTGATTAATGGATCTAGTG+AGG | 0.586296 | 5.3:+17547776 | MS.gene69612:CDS |
| GTGCTTTGACCTGGGTCCGG+GGG | 0.586355 | 5.3:-17546696 | None:intergenic |
| GACAGAGGTAGTAGCAGCGG+CGG | 0.587288 | 5.3:-17546587 | None:intergenic |
| GATTCCGACGATGATGGTGC+TGG | 0.590858 | 5.3:-17546502 | None:intergenic |
| AGAACGGCCTTATGGCCAAA+GGG | 0.597615 | 5.3:-17549202 | None:intergenic |
| GAGCAAGGCATTGTATAGAA+CGG | 0.599279 | 5.3:-17549218 | None:intergenic |
| TGTTGAAACTGTACAGTGCT+TGG | 0.600109 | 5.3:+17546819 | MS.gene69612:CDS |
| TCGTTTGACGTCTTTATCCG+TGG | 0.600195 | 5.3:+17549263 | MS.gene69612:CDS |
| ACTTGAATACTGAAGCTGAA+AGG | 0.602852 | 5.3:+17549027 | MS.gene69612:CDS |
| AGAGACAGAGGTAGTAGCAG+CGG | 0.604458 | 5.3:-17546590 | None:intergenic |
| ACGACCAGTGAGTAAGAAGA+TGG | 0.608825 | 5.3:+17546774 | MS.gene69612:CDS |
| TGGGATGTTGCCATAATTGG+TGG | 0.610485 | 5.3:-17546635 | None:intergenic |
| TGCTGAGAGATTAGAGACAG+AGG | 0.613637 | 5.3:-17546602 | None:intergenic |
| ATAATTCAGTTAGAATTCGA+GGG | 0.614687 | 5.3:+17546737 | MS.gene69612:CDS |
| ATTAATGGATCTAGTGAGGG+TGG | 0.615216 | 5.3:+17547780 | MS.gene69612:CDS |
| TGCACCAGCACCATCATCGT+CGG | 0.615748 | 5.3:+17546498 | MS.gene69612:CDS |
| TAGAACGGCCTTATGGCCAA+AGG | 0.615833 | 5.3:-17549203 | None:intergenic |
| TTGATTAATGGATCTAGTGA+GGG | 0.619081 | 5.3:+17547777 | MS.gene69612:CDS |
| AGATATGGTGCACCACTGCA+TGG | 0.619194 | 5.3:+17549726 | MS.gene69612:intron |
| TAAGCCGCAGAGTATTTCGC+AGG | 0.624017 | 5.3:-17548436 | None:intergenic |
| GAAGCATCCTCTATTTGGAA+GGG | 0.624822 | 5.3:-17547147 | None:intergenic |
| TGCCATAATTGGTGGCTAAG+GGG | 0.625961 | 5.3:-17546627 | None:intergenic |
| TCTCAGCCGTGAGTCTGTGG+TGG | 0.626818 | 5.3:+17546894 | MS.gene69612:CDS |
| CTGGTCTTGATGCTGAAATG+CGG | 0.628437 | 5.3:+17547970 | MS.gene69612:CDS |
| GAACGTCCACCACAGACTCA+CGG | 0.631311 | 5.3:-17546900 | None:intergenic |
| AGAAGGTATTGAGATGCTCA+AGG | 0.631343 | 5.3:+17548466 | MS.gene69612:CDS |
| CGGGGCTGTGTATAGAGCAG+AGG | 0.634042 | 5.3:+17547914 | MS.gene69612:CDS |
| CGTGTTGTAATGCTCTTCTG+TGG | 0.634961 | 5.3:+17549771 | MS.gene69612:CDS |
| TGATTCAGTGAGTGAGCAGA+TGG | 0.646610 | 5.3:+17546855 | MS.gene69612:CDS |
| AGAAGTATCTTGAAGCTGTG+AGG | 0.665661 | 5.3:+17548167 | MS.gene69612:CDS |
| GGAGCTCCAATCCAAGACAC+CGG | 0.683365 | 5.3:+17546663 | MS.gene69612:CDS |
| AAGTGAAGCTGAATATGACA+GGG | 0.700528 | 5.3:+17547173 | MS.gene69612:CDS |
| ATGTCATGCGAATATTATCG+AGG | 0.703735 | 5.3:-17549794 | None:intergenic |
| TATGGTGCACCACTGCATGG+TGG | 0.757084 | 5.3:+17549729 | MS.gene69612:CDS |
| AGTACCTGCGAAATACTCTG+CGG | 0.773213 | 5.3:+17548432 | MS.gene69612:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAGTAGTAAAATATTAA+GGG | - | chr5.3:17549085-17549104 | None:intergenic | 10.0% |
| !! | TATTTAGTAGTAAAATATTA+AGG | - | chr5.3:17549086-17549105 | None:intergenic | 10.0% |
| !!! | TACTTTTTTTTTTGTATTAT+AGG | + | chr5.3:17548218-17548237 | MS.gene69612:intron | 10.0% |
| !!! | AGGTTTTTATTAGTTTTTTA+GGG | + | chr5.3:17546971-17546990 | MS.gene69612:intron | 15.0% |
| !!! | ATAACTTTTGATTGTATTTT+CGG | + | chr5.3:17547696-17547715 | MS.gene69612:intron | 15.0% |
| !!! | ATCAATTAAAATTGACATTT+TGG | + | chr5.3:17548682-17548701 | MS.gene69612:intron | 15.0% |
| !!! | ATGATTTGTCTTATTTTATT+TGG | + | chr5.3:17548080-17548099 | MS.gene69612:intron | 15.0% |
| !!! | ATTACTTTTCTAAAACTAAT+TGG | - | chr5.3:17549061-17549080 | None:intergenic | 15.0% |
| !!! | TTATTGTTGTTATTATTTTC+TGG | + | chr5.3:17549663-17549682 | MS.gene69612:intron | 15.0% |
| !!! | TTTTTAAACTGAATTACAAA+GGG | + | chr5.3:17547811-17547830 | MS.gene69612:CDS | 15.0% |
| !! | AAATAATAACAACAATAACC+AGG | - | chr5.3:17549661-17549680 | None:intergenic | 20.0% |
| !! | AATAATAACAACAATAACCA+GGG | - | chr5.3:17549660-17549679 | None:intergenic | 20.0% |
| !! | TATAAGATTAAAATGTTCAC+AGG | - | chr5.3:17548644-17548663 | None:intergenic | 20.0% |
| !! | TGGATTTCAATTCTATTTAT+AGG | + | chr5.3:17549147-17549166 | MS.gene69612:intron | 20.0% |
| !!! | AAAAAAAAAAGTACCTTTAG+CGG | - | chr5.3:17548211-17548230 | None:intergenic | 20.0% |
| !!! | ATGTCAATGTTTTTTTGTAA+TGG | + | chr5.3:17547383-17547402 | MS.gene69612:intron | 20.0% |
| !!! | CAGGTTTTTATTAGTTTTTT+AGG | + | chr5.3:17546970-17546989 | MS.gene69612:intron | 20.0% |
| !!! | CTATTATGTAAAACTGATTT+TGG | + | chr5.3:17549127-17549146 | MS.gene69612:intron | 20.0% |
| !!! | GTCATGTTTAATATATTTTC+TGG | + | chr5.3:17547604-17547623 | MS.gene69612:intron | 20.0% |
| !!! | GTGTTATGAAAATTTGATTT+TGG | + | chr5.3:17547008-17547027 | MS.gene69612:intron | 20.0% |
| !!! | GTTTTTAAACTGAATTACAA+AGG | + | chr5.3:17547810-17547829 | MS.gene69612:CDS | 20.0% |
| !!! | TAACTTTTGATTGTATTTTC+GGG | + | chr5.3:17547697-17547716 | MS.gene69612:intron | 20.0% |
| !!! | TGTTTTAACTATGATCTAAT+TGG | + | chr5.3:17548917-17548936 | MS.gene69612:intron | 20.0% |
| !!! | TTATTTTATTTGGCAGATTA+TGG | + | chr5.3:17548090-17548109 | MS.gene69612:intron | 20.0% |
| ! | AAACATTGACATTCACATAA+AGG | - | chr5.3:17547375-17547394 | None:intergenic | 25.0% |
| ! | AAATTAAGACTAGAAGACTT+CGG | - | chr5.3:17548833-17548852 | None:intergenic | 25.0% |
| ! | AATAATTCAGTTAGAATTCG+AGG | + | chr5.3:17546736-17546755 | MS.gene69612:CDS | 25.0% |
| ! | AGCATCAATGTAATAAGATA+TGG | - | chr5.3:17549556-17549575 | None:intergenic | 25.0% |
| ! | ATAATTCAGTTAGAATTCGA+GGG | + | chr5.3:17546737-17546756 | MS.gene69612:CDS | 25.0% |
| ! | CAAACTCATCAAAATAACAT+TGG | - | chr5.3:17547557-17547576 | None:intergenic | 25.0% |
| ! | TAAACTATTCAACTTGTAAG+TGG | + | chr5.3:17548504-17548523 | MS.gene69612:intron | 25.0% |
| ! | TAAATTGTATTGTGTGAGTA+GGG | + | chr5.3:17547110-17547129 | MS.gene69612:CDS | 25.0% |
| ! | TCAAATCAAACAACAATAAC+AGG | - | chr5.3:17549420-17549439 | None:intergenic | 25.0% |
| ! | TTATCATAGTTGATCTTATG+TGG | + | chr5.3:17548260-17548279 | MS.gene69612:intron | 25.0% |
| !! | TATTAATGATTTTGCTTTGC+AGG | + | chr5.3:17548974-17548993 | MS.gene69612:intron | 25.0% |
| !!! | ACGTTTGTTGTATATAGATT+CGG | + | chr5.3:17547302-17547321 | MS.gene69612:intron | 25.0% |
| !!! | CTAGTCTTAATTTTCTCTTA+TGG | + | chr5.3:17548840-17548859 | MS.gene69612:intron | 25.0% |
| !!! | GTGGTTTTAAATTATTGATC+TGG | - | chr5.3:17547258-17547277 | None:intergenic | 25.0% |
| AACACAAATCTTAATCAGTG+TGG | - | chr5.3:17547277-17547296 | None:intergenic | 30.0% | |
| ACAGGAAACTTGAGATTTAA+TGG | - | chr5.3:17549402-17549421 | None:intergenic | 30.0% | |
| AGACAAATCATCAGTAAATC+AGG | - | chr5.3:17548071-17548090 | None:intergenic | 30.0% | |
| CAAGATACTTCTTACATTTC+TGG | - | chr5.3:17548159-17548178 | None:intergenic | 30.0% | |
| CGTGATAAAAGAAAGACTAA+AGG | - | chr5.3:17548567-17548586 | None:intergenic | 30.0% | |
| CTAAATTGTATTGTGTGAGT+AGG | + | chr5.3:17547109-17547128 | MS.gene69612:CDS | 30.0% | |
| CTAGATCCATTAATCAACTT+TGG | - | chr5.3:17547774-17547793 | None:intergenic | 30.0% | |
| CTTATTACATTGATGCTTTC+AGG | + | chr5.3:17549559-17549578 | MS.gene69612:CDS | 30.0% | |
| GTGAATTGAAATGAAGTCTT+CGG | - | chr5.3:17547748-17547767 | None:intergenic | 30.0% | |
| TTAACTATGATCTAATTGGC+TGG | + | chr5.3:17548921-17548940 | MS.gene69612:intron | 30.0% | |
| TTTCTCTTATGGATAGTTCT+AGG | + | chr5.3:17548851-17548870 | MS.gene69612:intron | 30.0% | |
| ! | TGTGTGGTTTTCTTCATTAT+AGG | + | chr5.3:17547071-17547090 | MS.gene69612:intron | 30.0% |
| ! | TTGATTAATGGATCTAGTGA+GGG | + | chr5.3:17547777-17547796 | MS.gene69612:CDS | 30.0% |
| !! | AATGGAAGTGCTAATACATT+TGG | - | chr5.3:17549384-17549403 | None:intergenic | 30.0% |
| !! | CTATATATTTGTTGTCGCTT+AGG | + | chr5.3:17549444-17549463 | MS.gene69612:intron | 30.0% |
| !! | TGATTTTAACCGTGTTTTTG+AGG | + | chr5.3:17547890-17547909 | MS.gene69612:CDS | 30.0% |
| !!! | TGTTTTTTTGTAATGGATGC+AGG | + | chr5.3:17547390-17547409 | MS.gene69612:intron | 30.0% |
| AAACCAACTGGAAATTGGTT+AGG | + | chr5.3:17548765-17548784 | MS.gene69612:intron | 35.0% | |
| AAGTGAAGCTGAATATGACA+GGG | + | chr5.3:17547173-17547192 | MS.gene69612:CDS | 35.0% | |
| AATGTGTGATCTTCCAGATA+TGG | + | chr5.3:17549711-17549730 | MS.gene69612:intron | 35.0% | |
| ACAGATATACCTCGAAATAG+TGG | - | chr5.3:17548004-17548023 | None:intergenic | 35.0% | |
| ACTAATAAAAACCTGCTGAG+TGG | - | chr5.3:17546965-17546984 | None:intergenic | 35.0% | |
| ACTTGAATACTGAAGCTGAA+AGG | + | chr5.3:17549027-17549046 | MS.gene69612:CDS | 35.0% | |
| AGTAGAGACATCCTAAACAT+AGG | - | chr5.3:17549631-17549650 | None:intergenic | 35.0% | |
| AGTGTGAGTTGCATTGTTTA+GGG | + | chr5.3:17547031-17547050 | MS.gene69612:intron | 35.0% | |
| ATGTCATGCGAATATTATCG+AGG | - | chr5.3:17549797-17549816 | None:intergenic | 35.0% | |
| CTCTATTTGGAAGGGTAAAA+CGG | - | chr5.3:17547142-17547161 | None:intergenic | 35.0% | |
| CTTCAACATTATCCGCAATA+CGG | - | chr5.3:17547504-17547523 | None:intergenic | 35.0% | |
| GTCTCCAGAAAACATTTCAT+CGG | + | chr5.3:17548740-17548759 | MS.gene69612:intron | 35.0% | |
| TAATGGGATGTTGCCATAAT+TGG | - | chr5.3:17546641-17546660 | None:intergenic | 35.0% | |
| TATGATGGTATTGTGTTGTG+TGG | + | chr5.3:17547055-17547074 | MS.gene69612:intron | 35.0% | |
| TCAGTATTCAAGTCACCAAA+AGG | - | chr5.3:17549020-17549039 | None:intergenic | 35.0% | |
| TCATAGTTGATCTTATGTGG+TGG | + | chr5.3:17548263-17548282 | MS.gene69612:intron | 35.0% | |
| TCTATTTGGAAGGGTAAAAC+GGG | - | chr5.3:17547141-17547160 | None:intergenic | 35.0% | |
| TTAGGTGAGGAGATAATTTC+AGG | + | chr5.3:17549462-17549481 | MS.gene69612:intron | 35.0% | |
| ! | ATACATTTGGAGAAGCATGA+CGG | - | chr5.3:17549371-17549390 | None:intergenic | 35.0% |
| ! | CACACTCCAAAGTTGATTAA+TGG | + | chr5.3:17547765-17547784 | MS.gene69612:CDS | 35.0% |
| ! | CAGTTTCAACATTTTCTCTG+AGG | - | chr5.3:17546810-17546829 | None:intergenic | 35.0% |
| ! | CTTGTTGTATCTTCTTACCA+CGG | - | chr5.3:17549283-17549302 | None:intergenic | 35.0% |
| ! | GCACGTTCTTCTAACAATTT+TGG | - | chr5.3:17549507-17549526 | None:intergenic | 35.0% |
| ! | GTGGTTTTCTTCATTATAGG+TGG | + | chr5.3:17547074-17547093 | MS.gene69612:intron | 35.0% |
| ! | GTTGATTAATGGATCTAGTG+AGG | + | chr5.3:17547776-17547795 | MS.gene69612:CDS | 35.0% |
| ! | TCAAGGAATTTTCCGTATTG+CGG | + | chr5.3:17547489-17547508 | MS.gene69612:CDS | 35.0% |
| ! | TGCATTGTTTAGGGTTATGA+TGG | + | chr5.3:17547040-17547059 | MS.gene69612:intron | 35.0% |
| ! | TGTCGCTTATACCTATGTTT+AGG | + | chr5.3:17549617-17549636 | MS.gene69612:intron | 35.0% |
| ! | TGTGTGTTTGAAATCGTTGA+GGG | + | chr5.3:17548039-17548058 | MS.gene69612:intron | 35.0% |
| ! | TTGTGTGTTTGAAATCGTTG+AGG | + | chr5.3:17548038-17548057 | MS.gene69612:intron | 35.0% |
| ! | TTTGCCGATGAAATGTTTTC+TGG | - | chr5.3:17548747-17548766 | None:intergenic | 35.0% |
| !! | TTCTAGAAGCATCCTCTATT+TGG | - | chr5.3:17547155-17547174 | None:intergenic | 35.0% |
| !! | TTTTGATTGTATTTTCGGGC+AGG | + | chr5.3:17547701-17547720 | MS.gene69612:intron | 35.0% |
| !!! | TAGTTTTGATCATCAGAGCA+AGG | - | chr5.3:17549236-17549255 | None:intergenic | 35.0% |
| !!! | TTTAACCGTGTTTTTGAGGT+CGG | + | chr5.3:17547894-17547913 | MS.gene69612:CDS | 35.0% |
| ACCTCAACTTCACAAGCAAA+TGG | + | chr5.3:17547857-17547876 | MS.gene69612:CDS | 40.0% | |
| ACTGAAGCTGAAAGGAAACT+AGG | + | chr5.3:17549035-17549054 | MS.gene69612:CDS | 40.0% | |
| ATTCCGGCTACTCCTATTAA+AGG | + | chr5.3:17546937-17546956 | MS.gene69612:CDS | 40.0% | |
| ATTGTTAGAAGAACGTGCAC+AGG | + | chr5.3:17549509-17549528 | MS.gene69612:CDS | 40.0% | |
| ATTTCATCGGCAAAACCAAC+TGG | + | chr5.3:17548753-17548772 | MS.gene69612:intron | 40.0% | |
| CACAAGCAAATGGCAATATG+TGG | + | chr5.3:17547867-17547886 | MS.gene69612:CDS | 40.0% | |
| CATTGTATAGAACGGCCTTA+TGG | - | chr5.3:17549213-17549232 | None:intergenic | 40.0% | |
| CGACTGTTCATCGTTAGTTA+CGG | + | chr5.3:17547215-17547234 | MS.gene69612:intron | 40.0% | |
| CGGAAAATTCCTTGATTAGC+TGG | - | chr5.3:17547484-17547503 | None:intergenic | 40.0% | |
| CGTAACTAACGATGAACAGT+CGG | - | chr5.3:17547217-17547236 | None:intergenic | 40.0% | |
| GAAGTGAAGCTGAATATGAC+AGG | + | chr5.3:17547172-17547191 | MS.gene69612:CDS | 40.0% | |
| GAGTGTGAGTTGCATTGTTT+AGG | + | chr5.3:17547030-17547049 | MS.gene69612:intron | 40.0% | |
| TATTTCCACGTGACCCAAAA+AGG | + | chr5.3:17549820-17549839 | MS.gene69612:CDS | 40.0% | |
| TGTTGAAACTGTACAGTGCT+TGG | + | chr5.3:17546819-17546838 | MS.gene69612:CDS | 40.0% | |
| TTAAGACTAGAAGACTTCGG+AGG | - | chr5.3:17548830-17548849 | None:intergenic | 40.0% | |
| TTATGGCAACATCCCATTAG+AGG | + | chr5.3:17546642-17546661 | MS.gene69612:CDS | 40.0% | |
| TTGCAAACACCAGCTAATCA+AGG | + | chr5.3:17547472-17547491 | MS.gene69612:CDS | 40.0% | |
| TTTAATAGGAGTAGCCGGAA+TGG | - | chr5.3:17546938-17546957 | None:intergenic | 40.0% | |
| ! | ACAACTTGTTCGTGTGAATC+AGG | + | chr5.3:17547420-17547439 | MS.gene69612:CDS | 40.0% |
| ! | ATTAATGGATCTAGTGAGGG+TGG | + | chr5.3:17547780-17547799 | MS.gene69612:CDS | 40.0% |
| ! | CGTTTTACCCTTCCAAATAG+AGG | + | chr5.3:17547140-17547159 | MS.gene69612:CDS | 40.0% |
| ! | GAAGCATCCTCTATTTGGAA+GGG | - | chr5.3:17547150-17547169 | None:intergenic | 40.0% |
| ! | GATTTTGCTTTGCAGGAAGT+TGG | + | chr5.3:17548981-17549000 | MS.gene69612:intron | 40.0% |
| ! | GGAGTAGAAATTGAGCCTTT+TGG | + | chr5.3:17549002-17549021 | MS.gene69612:CDS | 40.0% |
| ! | GTGTGTTTGAAATCGTTGAG+GGG | + | chr5.3:17548040-17548059 | MS.gene69612:intron | 40.0% |
| ! | TTGCCATAATTGGTGGCTAA+GGG | - | chr5.3:17546631-17546650 | None:intergenic | 40.0% |
| !! | AGAAGCATCCTCTATTTGGA+AGG | - | chr5.3:17547151-17547170 | None:intergenic | 40.0% |
| !! | AGAAGGTATTGAGATGCTCA+AGG | + | chr5.3:17548466-17548485 | MS.gene69612:CDS | 40.0% |
| !! | AGAAGTATCTTGAAGCTGTG+AGG | + | chr5.3:17548167-17548186 | MS.gene69612:CDS | 40.0% |
| !! | ATGGAGTTAAGGCACTGATA+AGG | + | chr5.3:17548613-17548632 | MS.gene69612:intron | 40.0% |
| !! | GAGCAAGGCATTGTATAGAA+CGG | - | chr5.3:17549221-17549240 | None:intergenic | 40.0% |
| !! | TATTTGTTGTCGCTTAGGTG+AGG | + | chr5.3:17549449-17549468 | MS.gene69612:intron | 40.0% |
| !!! | TTAACCGTGTTTTTGAGGTC+GGG | + | chr5.3:17547895-17547914 | MS.gene69612:CDS | 40.0% |
| !!! | TTTTTGTAATGGATGCAGGC+TGG | + | chr5.3:17547394-17547413 | MS.gene69612:intron | 40.0% |
| AACGCCATCTTCTTACTCAC+TGG | - | chr5.3:17546781-17546800 | None:intergenic | 45.0% | |
| AAGCGACACTCAATGCTACA+GGG | - | chr5.3:17549605-17549624 | None:intergenic | 45.0% | |
| AAGTAAAAAAGCCGCCAAGC+TGG | + | chr5.3:17546537-17546556 | MS.gene69612:CDS | 45.0% | |
| AATCGTCAAGTGCTTTGACC+TGG | - | chr5.3:17546708-17546727 | None:intergenic | 45.0% | |
| ACACAGATGCCTGTGAGTAA+AGG | - | chr5.3:17547943-17547962 | None:intergenic | 45.0% | |
| ACATGCCAGCATCCTTTACA+GGG | - | chr5.3:17548710-17548729 | None:intergenic | 45.0% | |
| ACGACCAGTGAGTAAGAAGA+TGG | + | chr5.3:17546774-17546793 | MS.gene69612:CDS | 45.0% | |
| ACTGCAGATTCACAGGGTTA+TGG | - | chr5.3:17548415-17548434 | None:intergenic | 45.0% | |
| AGGCATCTGTGTGAGTTTAC+TGG | + | chr5.3:17547951-17547970 | MS.gene69612:CDS | 45.0% | |
| AGTACCTGCGAAATACTCTG+CGG | + | chr5.3:17548432-17548451 | MS.gene69612:intron | 45.0% | |
| AGTACCTTTAGCGGTTCGAA+TGG | - | chr5.3:17548202-17548221 | None:intergenic | 45.0% | |
| ATCACGACGCTGAGTTAGAA+AGG | + | chr5.3:17548581-17548600 | MS.gene69612:intron | 45.0% | |
| ATCGTCAAGTGCTTTGACCT+GGG | - | chr5.3:17546707-17546726 | None:intergenic | 45.0% | |
| ATCTGCTCACTCACTGAATC+AGG | - | chr5.3:17546856-17546875 | None:intergenic | 45.0% | |
| ATGTCTCTACTACTGAACCC+TGG | + | chr5.3:17549640-17549659 | MS.gene69612:intron | 45.0% | |
| CAGAGGATTCCTTTACTCAC+AGG | + | chr5.3:17547931-17547950 | MS.gene69612:CDS | 45.0% | |
| CGGCAAAACCAACTGGAAAT+TGG | + | chr5.3:17548760-17548779 | MS.gene69612:intron | 45.0% | |
| CGTGTTGTAATGCTCTTCTG+TGG | + | chr5.3:17549771-17549790 | MS.gene69612:CDS | 45.0% | |
| GAGCCTAACCAATTTCCAGT+TGG | - | chr5.3:17548771-17548790 | None:intergenic | 45.0% | |
| GATTGACTGCCACTATTTCG+AGG | + | chr5.3:17547992-17548011 | MS.gene69612:CDS | 45.0% | |
| GCCATTTGCTTGTGAAGTTG+AGG | - | chr5.3:17547861-17547880 | None:intergenic | 45.0% | |
| GTACCTTTAGCGGTTCGAAT+GGG | - | chr5.3:17548201-17548220 | None:intergenic | 45.0% | |
| GTGCCTTTAATAGGAGTAGC+CGG | - | chr5.3:17546943-17546962 | None:intergenic | 45.0% | |
| TAAGCGACACTCAATGCTAC+AGG | - | chr5.3:17549606-17549625 | None:intergenic | 45.0% | |
| TATCCTTCACCGATACCCTT+TGG | + | chr5.3:17549187-17549206 | MS.gene69612:CDS | 45.0% | |
| TCGAGGTATATCTGTCACAC+TGG | + | chr5.3:17548009-17548028 | MS.gene69612:intron | 45.0% | |
| TCGTTTGACGTCTTTATCCG+TGG | + | chr5.3:17549263-17549282 | MS.gene69612:CDS | 45.0% | |
| TCTGATGATTCCGACGATGA+TGG | - | chr5.3:17546511-17546530 | None:intergenic | 45.0% | |
| TGATTCAGTGAGTGAGCAGA+TGG | + | chr5.3:17546855-17546874 | MS.gene69612:CDS | 45.0% | |
| TGCTGAGAGATTAGAGACAG+AGG | - | chr5.3:17546605-17546624 | None:intergenic | 45.0% | |
| TGCTGAGTGGTGCCTTTAAT+AGG | - | chr5.3:17546952-17546971 | None:intergenic | 45.0% | |
| TGGGATGTTGCCATAATTGG+TGG | - | chr5.3:17546638-17546657 | None:intergenic | 45.0% | |
| ! | CAAAGCACTTGACGATTCAC+TGG | + | chr5.3:17546711-17546730 | MS.gene69612:CDS | 45.0% |
| ! | GTTGCCATAATTGGTGGCTA+AGG | - | chr5.3:17546632-17546651 | None:intergenic | 45.0% |
| ! | TCATGGCGTTGTTTCCATTC+CGG | + | chr5.3:17546921-17546940 | MS.gene69612:CDS | 45.0% |
| ! | TGCCATAATTGGTGGCTAAG+GGG | - | chr5.3:17546630-17546649 | None:intergenic | 45.0% |
| ! | TGGATTGGAGCTCCTCTAAT+GGG | - | chr5.3:17546657-17546676 | None:intergenic | 45.0% |
| ! | TTGGATTGGAGCTCCTCTAA+TGG | - | chr5.3:17546658-17546677 | None:intergenic | 45.0% |
| !! | CTGGTCTTGATGCTGAAATG+CGG | + | chr5.3:17547970-17547989 | MS.gene69612:CDS | 45.0% |
| !! | TATTAAAGGCACCACTCAGC+AGG | + | chr5.3:17546951-17546970 | MS.gene69612:CDS | 45.0% |
| !!! | GACATTTTGGAGCCCTGTAA+AGG | + | chr5.3:17548695-17548714 | MS.gene69612:intron | 45.0% |
| !!! | GTAATCCTTTTTGGGTCACG+TGG | - | chr5.3:17549828-17549847 | None:intergenic | 45.0% |
| !!! | TAACCGTGTTTTTGAGGTCG+GGG | + | chr5.3:17547896-17547915 | MS.gene69612:CDS | 45.0% |
| ACACCCTAGGACAGAACAGT+GGG | - | chr5.3:17548793-17548812 | None:intergenic | 50.0% | |
| ACCGATACCCTTTGGCCATA+AGG | + | chr5.3:17549195-17549214 | MS.gene69612:CDS | 50.0% | |
| ACGACGCTGAGTTAGAAAGG+TGG | + | chr5.3:17548584-17548603 | MS.gene69612:intron | 50.0% | |
| AGAGACAGAGGTAGTAGCAG+CGG | - | chr5.3:17546593-17546612 | None:intergenic | 50.0% | |
| AGATATGGTGCACCACTGCA+TGG | + | chr5.3:17549726-17549745 | MS.gene69612:intron | 50.0% | |
| AGCTGGTAAAGCTCCGACAT+CGG | + | chr5.3:17546554-17546573 | MS.gene69612:CDS | 50.0% | |
| ATGCAGTGGTGCACCATATC+TGG | - | chr5.3:17549727-17549746 | None:intergenic | 50.0% | |
| ATGTCGGAGCTTTACCAGCT+TGG | - | chr5.3:17546554-17546573 | None:intergenic | 50.0% | |
| CACATGCCAGCATCCTTTAC+AGG | - | chr5.3:17548711-17548730 | None:intergenic | 50.0% | |
| CGACGCTGAGTTAGAAAGGT+GGG | + | chr5.3:17548585-17548604 | MS.gene69612:intron | 50.0% | |
| CTGCGGCTTACATACGAAGA+AGG | + | chr5.3:17548449-17548468 | MS.gene69612:CDS | 50.0% | |
| GACCCCTTAGCCACCAATTA+TGG | + | chr5.3:17546625-17546644 | MS.gene69612:CDS | 50.0% | |
| GTACCCATTCGAACCGCTAA+AGG | + | chr5.3:17548195-17548214 | MS.gene69612:CDS | 50.0% | |
| GTTAGAAAGGTGGGAGGTGA+TGG | + | chr5.3:17548594-17548613 | MS.gene69612:intron | 50.0% | |
| TGAATATGACAGGGCCAGTC+AGG | + | chr5.3:17547182-17547201 | MS.gene69612:CDS | 50.0% | |
| ! | AGAACGGCCTTATGGCCAAA+GGG | - | chr5.3:17549205-17549224 | None:intergenic | 50.0% |
| ! | GCAGGTACTGCAGATTCACA+GGG | - | chr5.3:17548421-17548440 | None:intergenic | 50.0% |
| ! | GCCTTATGGCCAAAGGGTAT+CGG | - | chr5.3:17549199-17549218 | None:intergenic | 50.0% |
| ! | TAAGCCGCAGAGTATTTCGC+AGG | - | chr5.3:17548439-17548458 | None:intergenic | 50.0% |
| ! | TAGAACGGCCTTATGGCCAA+AGG | - | chr5.3:17549206-17549225 | None:intergenic | 50.0% |
| AAGTGCTTTGACCTGGGTCC+GGG | - | chr5.3:17546701-17546720 | None:intergenic | 55.0% | |
| CAAGTGCTTTGACCTGGGTC+CGG | - | chr5.3:17546702-17546721 | None:intergenic | 55.0% | |
| CACACCCTAGGACAGAACAG+TGG | - | chr5.3:17548794-17548813 | None:intergenic | 55.0% | |
| CAGCCCCGACCTCAAAAACA+CGG | - | chr5.3:17547902-17547921 | None:intergenic | 55.0% | |
| CGCTGAGTTAGAAAGGTGGG+AGG | + | chr5.3:17548588-17548607 | MS.gene69612:intron | 55.0% | |
| GAACGTCCACCACAGACTCA+CGG | - | chr5.3:17546903-17546922 | None:intergenic | 55.0% | |
| GAAGTTGAGGTGACTGAGCC+AGG | - | chr5.3:17547848-17547867 | None:intergenic | 55.0% | |
| GACTTCGGAGGATCAGCTCT+CGG | - | chr5.3:17548818-17548837 | None:intergenic | 55.0% | |
| GATGGACCGGTGTCTTGGAT+TGG | - | chr5.3:17546672-17546691 | None:intergenic | 55.0% | |
| GCTCCCACTGTTCTGTCCTA+GGG | + | chr5.3:17548787-17548806 | MS.gene69612:intron | 55.0% | |
| GCTCCGACATCGGCAACAAA+TGG | + | chr5.3:17546564-17546583 | MS.gene69612:CDS | 55.0% | |
| GGAGCTCCAATCCAAGACAC+CGG | + | chr5.3:17546663-17546682 | MS.gene69612:CDS | 55.0% | |
| GTCGGTGCAATGTACCTGAC+TGG | - | chr5.3:17547199-17547218 | None:intergenic | 55.0% | |
| TATGGTGCACCACTGCATGG+TGG | + | chr5.3:17549729-17549748 | MS.gene69612:CDS | 55.0% | |
| TCGGAGCTTTACCAGCTTGG+CGG | - | chr5.3:17546551-17546570 | None:intergenic | 55.0% | |
| TGCACCAGCACCATCATCGT+CGG | + | chr5.3:17546498-17546517 | MS.gene69612:CDS | 55.0% | |
| TGGAGCCCTGTAAAGGATGC+TGG | + | chr5.3:17548702-17548721 | MS.gene69612:intron | 55.0% | |
| TGGTGCAGGCTCTTTGCACT+CGG | - | chr5.3:17546485-17546504 | None:intergenic | 55.0% | |
| ! | CGCAGGTACTGCAGATTCAC+AGG | - | chr5.3:17548422-17548441 | None:intergenic | 55.0% |
| ! | CGGCCATTTGTTGCCGATGT+CGG | - | chr5.3:17546570-17546589 | None:intergenic | 55.0% |
| ! | GATTCCGACGATGATGGTGC+TGG | - | chr5.3:17546505-17546524 | None:intergenic | 55.0% |
| !! | GAGTCTGTGGTGGACGTTCA+TGG | + | chr5.3:17546904-17546923 | MS.gene69612:CDS | 55.0% |
| !! | GGTGGGAGGTGATGGAGTTA+AGG | + | chr5.3:17548602-17548621 | MS.gene69612:intron | 55.0% |
| !! | TGGCCAAAGGGTATCGGTGA+AGG | - | chr5.3:17549193-17549212 | None:intergenic | 55.0% |
| AGCTCTCAGCCGTGAGTCTG+TGG | + | chr5.3:17546891-17546910 | MS.gene69612:CDS | 60.0% | |
| AGTGCTTTGACCTGGGTCCG+GGG | - | chr5.3:17546700-17546719 | None:intergenic | 60.0% | |
| CGGGGCTGTGTATAGAGCAG+AGG | + | chr5.3:17547914-17547933 | MS.gene69612:CDS | 60.0% | |
| GACAGAGGTAGTAGCAGCGG+CGG | - | chr5.3:17546590-17546609 | None:intergenic | 60.0% | |
| GCACCACTGCATGGTGGCTT+TGG | + | chr5.3:17549735-17549754 | MS.gene69612:CDS | 60.0% | |
| GGCTCCCACTGTTCTGTCCT+AGG | + | chr5.3:17548786-17548805 | MS.gene69612:intron | 60.0% | |
| GGTGCAGGCTCTTTGCACTC+GGG | - | chr5.3:17546484-17546503 | None:intergenic | 60.0% | |
| TCAGCTCTCGGTCACACCCT+AGG | - | chr5.3:17548806-17548825 | None:intergenic | 60.0% | |
| TCTCAGCCGTGAGTCTGTGG+TGG | + | chr5.3:17546894-17546913 | MS.gene69612:CDS | 60.0% | |
| !! | CAAAGGGCATCCTGCATGCC+TGG | + | chr5.3:17547827-17547846 | MS.gene69612:CDS | 60.0% |
| !! | GACGATGATGGTGCTGGTGC+AGG | - | chr5.3:17546499-17546518 | None:intergenic | 60.0% |
| GACGGGATGGACCGGTGTCT+TGG | - | chr5.3:17546677-17546696 | None:intergenic | 65.0% | |
| GCGCCAAAGCCACCATGCAG+TGG | - | chr5.3:17549741-17549760 | None:intergenic | 65.0% | |
| GGTGACTGAGCCAGGCATGC+AGG | - | chr5.3:17547840-17547859 | None:intergenic | 65.0% | |
| GTGCTTTGACCTGGGTCCGG+GGG | - | chr5.3:17546699-17546718 | None:intergenic | 65.0% | |
| TTTGACCTGGGTCCGGGGGA+CGG | - | chr5.3:17546695-17546714 | None:intergenic | 65.0% | |
| !! | CTGCATGGTGGCTTTGGCGC+AGG | + | chr5.3:17549741-17549760 | MS.gene69612:CDS | 65.0% |
| !! | TGGTGGCTTTGGCGCAGGCT+TGG | + | chr5.3:17549746-17549765 | MS.gene69612:CDS | 65.0% |
| TTGACCTGGGTCCGGGGGAC+GGG | - | chr5.3:17546694-17546713 | None:intergenic | 70.0% | |
| CACCGGTCCATCCCGTCCCC+CGG | + | chr5.3:17546680-17546699 | MS.gene69612:CDS | 75.0% | |
| GTCCGGGGGACGGGATGGAC+CGG | - | chr5.3:17546685-17546704 | None:intergenic | 75.0% | |
| ! | CCATCCCGTCCCCCGGACCC+AGG | + | chr5.3:17546687-17546706 | MS.gene69612:CDS | 80.0% |
| ! | CCTGGGTCCGGGGGACGGGA+TGG | - | chr5.3:17546690-17546709 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 17546472 | 17549854 | 17546472 | ID=MS.gene69612 |
| chr5.3 | mRNA | 17546472 | 17549854 | 17546472 | ID=MS.gene69612.t1;Parent=MS.gene69612 |
| chr5.3 | exon | 17546472 | 17546972 | 17546472 | ID=MS.gene69612.t1.exon1;Parent=MS.gene69612.t1 |
| chr5.3 | CDS | 17546472 | 17546972 | 17546472 | ID=cds.MS.gene69612.t1;Parent=MS.gene69612.t1 |
| chr5.3 | exon | 17547093 | 17547203 | 17547093 | ID=MS.gene69612.t1.exon2;Parent=MS.gene69612.t1 |
| chr5.3 | CDS | 17547093 | 17547203 | 17547093 | ID=cds.MS.gene69612.t1;Parent=MS.gene69612.t1 |
| chr5.3 | exon | 17547412 | 17547525 | 17547412 | ID=MS.gene69612.t1.exon3;Parent=MS.gene69612.t1 |
| chr5.3 | CDS | 17547412 | 17547525 | 17547412 | ID=cds.MS.gene69612.t1;Parent=MS.gene69612.t1 |
| chr5.3 | exon | 17547723 | 17548013 | 17547723 | ID=MS.gene69612.t1.exon4;Parent=MS.gene69612.t1 |
| chr5.3 | CDS | 17547723 | 17548013 | 17547723 | ID=cds.MS.gene69612.t1;Parent=MS.gene69612.t1 |
| chr5.3 | exon | 17548106 | 17548216 | 17548106 | ID=MS.gene69612.t1.exon5;Parent=MS.gene69612.t1 |
| chr5.3 | CDS | 17548106 | 17548216 | 17548106 | ID=cds.MS.gene69612.t1;Parent=MS.gene69612.t1 |
| chr5.3 | exon | 17548434 | 17548487 | 17548434 | ID=MS.gene69612.t1.exon6;Parent=MS.gene69612.t1 |
| chr5.3 | CDS | 17548434 | 17548487 | 17548434 | ID=cds.MS.gene69612.t1;Parent=MS.gene69612.t1 |
| chr5.3 | exon | 17548996 | 17549075 | 17548996 | ID=MS.gene69612.t1.exon7;Parent=MS.gene69612.t1 |
| chr5.3 | CDS | 17548996 | 17549075 | 17548996 | ID=cds.MS.gene69612.t1;Parent=MS.gene69612.t1 |
| chr5.3 | exon | 17549169 | 17549284 | 17549169 | ID=MS.gene69612.t1.exon8;Parent=MS.gene69612.t1 |
| chr5.3 | CDS | 17549169 | 17549284 | 17549169 | ID=cds.MS.gene69612.t1;Parent=MS.gene69612.t1 |
| chr5.3 | exon | 17549466 | 17549580 | 17549466 | ID=MS.gene69612.t1.exon9;Parent=MS.gene69612.t1 |
| chr5.3 | CDS | 17549466 | 17549580 | 17549466 | ID=cds.MS.gene69612.t1;Parent=MS.gene69612.t1 |
| chr5.3 | exon | 17549728 | 17549854 | 17549728 | ID=MS.gene69612.t1.exon10;Parent=MS.gene69612.t1 |
| chr5.3 | CDS | 17549728 | 17549854 | 17549728 | ID=cds.MS.gene69612.t1;Parent=MS.gene69612.t1 |
| Gene Sequence |
| Protein sequence |
