AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98264

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98264.t1 MTR_1g014140 98.706 541 7 0 1 541 1 541 0.0 1104
MS.gene98264.t1 MTR_5g028360 71.009 545 137 4 1 541 62 589 0.0 771
MS.gene98264.t1 MTR_4g100920 25.506 494 286 16 87 536 86 541 5.03e-32 130
MS.gene98264.t1 MTR_8g102050 30.961 281 174 8 271 538 275 548 5.09e-28 118
MS.gene98264.t1 MTR_7g101050 31.560 282 173 10 271 538 298 573 5.02e-27 115
MS.gene98264.t1 MTR_2g036600 23.878 490 324 15 83 533 109 588 3.84e-23 103
MS.gene98264.t1 MTR_4g127770 22.200 491 322 15 87 533 601 1075 5.16e-20 94.7
MS.gene98264.t1 MTR_8g007295 22.691 498 295 18 90 533 111 572 6.44e-16 81.3
MS.gene98264.t1 MTR_4g127790 22.969 357 239 10 209 532 32 385 5.74e-15 77.4
MS.gene98264.t1 MTR_4g052070 27.953 254 150 9 92 333 72 304 2.20e-11 67.0
MS.gene98264.t1 MTR_8g011530 22.846 267 189 8 278 534 367 626 2.27e-11 67.0
MS.gene98264.t1 MTR_8g007295 24.468 282 180 9 90 368 111 362 7.58e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98264.t1 AT4G31180 64.632 557 179 4 3 541 2 558 0.0 733
MS.gene98264.t1 AT4G31180 64.632 557 179 4 3 541 2 558 0.0 733
MS.gene98264.t1 AT4G26870 65.825 515 170 4 28 541 23 532 0.0 694
MS.gene98264.t1 AT5G56680 30.882 272 168 8 278 536 303 567 2.71e-29 122
MS.gene98264.t1 AT4G17300 25.751 466 251 15 122 536 161 582 2.87e-28 119
MS.gene98264.t1 AT4G17300 25.751 466 251 15 122 536 141 562 3.17e-28 119
MS.gene98264.t1 AT1G70980 29.304 273 173 7 278 536 300 566 3.01e-25 110
MS.gene98264.t1 AT3G13490 22.133 497 294 17 94 533 136 596 2.55e-17 85.9

Find 137 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTTACATCGATTCTTTC+AGG 0.151574 6.2:+55405268 MS.gene98264:CDS
CAGCTTTGCGGCATCCTTCT+TGG 0.168840 6.2:-55402070 None:intergenic
ATTCCAGCCGCTCCTATTAA+AGG 0.200895 6.2:+55402471 MS.gene98264:CDS
CAAACAAATTAACACCTTTA+GGG 0.270476 6.2:-55403710 None:intergenic
ATGTCAATATGTGGTGATTT+TGG 0.279212 6.2:+55403376 MS.gene98264:CDS
TTCTTAGTCATCAGAGAAAA+TGG 0.279492 6.2:+55402333 MS.gene98264:CDS
CGGAAAATTCCTTGATTTGC+TGG 0.282793 6.2:-55403035 None:intergenic
TCAAAAGAGTTACTGTAGTT+TGG 0.284688 6.2:-55404961 None:intergenic
GATCCCCTTGCTGTCAATTA+TGG 0.290000 6.2:+55402159 MS.gene98264:CDS
TATGTAAGCCGCAGAGTATT+TGG 0.299031 6.2:-55403894 None:intergenic
TGAAATTGAGAAGGCCATTC+AGG 0.299926 6.2:+55402726 MS.gene98264:CDS
TGTTGTGAGGCACCTTTAAT+AGG 0.308209 6.2:-55402483 None:intergenic
AGGCATCTGTGCGAGTTTAC+AGG 0.319353 6.2:+55403451 MS.gene98264:CDS
CAAAAGAGTTACTGTAGTTT+GGG 0.335107 6.2:-55404960 None:intergenic
CACCGTACAGTGCTTGGTTC+AGG 0.346864 6.2:+55402359 MS.gene98264:CDS
CACAATACAGTTTCCTCACT+TGG 0.354867 6.2:-55402645 None:intergenic
CAGAAGATTCCTTTACTCAT+AGG 0.359787 6.2:+55403431 MS.gene98264:CDS
CACACTCCTAAGTTGATTGC+TGG 0.375345 6.2:+55403265 MS.gene98264:CDS
GTCCAGTCGTTGACATTGAC+AGG 0.393463 6.2:-55402216 None:intergenic
TAGCAAGGCATTGTATAAAA+TGG 0.394303 6.2:-55404931 None:intergenic
AGGTGGCGGCGGCAACTTCT+CGG 0.397158 6.2:-55402107 None:intergenic
GTACCACCACACGGTGGCTT+TGG 0.402704 6.2:+55405441 MS.gene98264:CDS
ACAACTTGTTCGTGTGAATC+AGG 0.411639 6.2:+55402974 MS.gene98264:CDS
CAAAGGGCAACCTGCATGCC+TGG 0.419819 6.2:+55403327 MS.gene98264:CDS
TACAGGTCTTGATGTTGAAA+TGG 0.423398 6.2:+55403468 MS.gene98264:CDS
CAAGAAGGATGCCGCAAAGC+TGG 0.423709 6.2:+55402071 MS.gene98264:CDS
AGGGTGGAGCTGCTGTCTTT+AGG 0.428133 6.2:+55403296 MS.gene98264:CDS
CTTTGCGGCATCCTTCTTGG+AGG 0.431699 6.2:-55402067 None:intergenic
GGAGTAGAGATTGAACCTTT+TGG 0.442706 6.2:+55404711 MS.gene98264:CDS
CATTGACAGGGGTCTTCGAT+TGG 0.443151 6.2:-55402203 None:intergenic
AACACCTTTAGGGGTTCAAA+CGG 0.444877 6.2:-55403700 None:intergenic
ATCTGCGGACTCACTAAATC+AGG 0.450583 6.2:-55402387 None:intergenic
CTTGATTTGCTGGTGTTCGC+AGG 0.452358 6.2:-55403025 None:intergenic
AACGCCATCTTCTTCCCAAC+TGG 0.452718 6.2:-55402312 None:intergenic
GCCCTCCCACGGATTAGAAC+CGG 0.456675 6.2:-55402276 None:intergenic
GCAGCATCCTCGATATTAAT+CGG 0.461821 6.2:-55402691 None:intergenic
TGGAGCTGCTGTCTTTAGGC+TGG 0.464922 6.2:+55403300 MS.gene98264:CDS
TTAGGAGAGGAGATAATATC+AGG 0.466169 6.2:+55405171 MS.gene98264:intron
GATTAAGAAACATTATTATG+AGG 0.466183 6.2:+55403492 MS.gene98264:CDS
TTACATTTCCAACTTGAGAC+TGG 0.472065 6.2:-55403061 None:intergenic
TATTAAAGGTGCCTCACAAC+AGG 0.473545 6.2:+55402485 MS.gene98264:CDS
CGGTGGCTTTGGAGTAGGCT+TGG 0.490259 6.2:+55405452 MS.gene98264:CDS
TGAGGCTCTCAATGATTCAC+TGG 0.499024 6.2:+55402245 MS.gene98264:CDS
TGGTTTCACCGTACAGTGCT+TGG 0.499781 6.2:+55402353 MS.gene98264:CDS
AAAATGGTCTTACAGCCAAC+GGG 0.502027 6.2:-55404915 None:intergenic
GTCTTACAGCCAACGGGTAC+CGG 0.506627 6.2:-55404909 None:intergenic
TCAGTATTCAAGTCACCAAA+AGG 0.506705 6.2:-55404726 None:intergenic
CTAGATCCAGCAATCAACTT+AGG 0.510006 6.2:-55403271 None:intergenic
TTTAATAGGAGCGGCTGGAA+TGG 0.513685 6.2:-55402469 None:intergenic
GAGTCTATTGTCGATGTCGA+AGG 0.513770 6.2:+55402438 MS.gene98264:CDS
GCACCTTTAATAGGAGCGGC+TGG 0.516328 6.2:-55402474 None:intergenic
CACAAGCTATTCGACCAGTT+GGG 0.517268 6.2:+55402298 MS.gene98264:CDS
GCACAAGCTATTCGACCAGT+TGG 0.517849 6.2:+55402297 MS.gene98264:CDS
ACACCTTTAGGGGTTCAAAC+GGG 0.524064 6.2:-55403699 None:intergenic
CAGCCAACGGGTACCGGTGA+AGG 0.524085 6.2:-55404903 None:intergenic
CTGCGGCTTACATATGAAGA+AGG 0.526092 6.2:+55403903 MS.gene98264:CDS
AATGAATATATATACCTGAA+TGG 0.529761 6.2:-55402740 None:intergenic
GAAACTGTATTGTGTGAGTA+AGG 0.532678 6.2:+55402654 MS.gene98264:CDS
AAACAAATTAACACCTTTAG+GGG 0.533347 6.2:-55403709 None:intergenic
GAATAGCTTGTGCCCTCCCA+CGG 0.535699 6.2:-55402287 None:intergenic
TTCCGCATCCAGTCTCAAGT+TGG 0.536075 6.2:+55403053 MS.gene98264:CDS
CTGCGAACACCAGCAAATCA+AGG 0.537117 6.2:+55403026 MS.gene98264:CDS
GAAGTTGAGGTGACTGAGCC+AGG 0.538658 6.2:-55403345 None:intergenic
AGAAAGGAAACTAGGCCAGC+TGG 0.539715 6.2:+55404752 MS.gene98264:CDS
TCTTTAGGCTGGACTACAAA+GGG 0.542694 6.2:+55403311 MS.gene98264:CDS
CGATGTAGCAGAGGTGGCGG+CGG 0.543849 6.2:-55402118 None:intergenic
CCACACGGTGGCTTTGGAGT+AGG 0.547341 6.2:+55405447 MS.gene98264:CDS
AACAAGCCGGTTCTAATCCG+TGG 0.547533 6.2:+55402270 MS.gene98264:CDS
TTTGAACACAAAATGTAAGA+AGG 0.547679 6.2:+55403651 MS.gene98264:CDS
CCCCTGTCAATGTCAACGAC+TGG 0.551263 6.2:+55402214 MS.gene98264:CDS
TAAAATGGTCTTACAGCCAA+CGG 0.552316 6.2:-55404916 None:intergenic
TCGATATTAATCGGCAGAGT+AGG 0.553228 6.2:-55402682 None:intergenic
GGTGACTGAGCCAGGCATGC+AGG 0.555621 6.2:-55403337 None:intergenic
TCGATTGGAGCTCAATGAGC+GGG 0.557785 6.2:-55402188 None:intergenic
GACATTTGCTTGTGAAGTTG+AGG 0.558674 6.2:-55403358 None:intergenic
GCACAGATGCCTATGAGTAA+AGG 0.560403 6.2:-55403440 None:intergenic
CACAAGCAAATGTCAATATG+TGG 0.561198 6.2:+55403367 MS.gene98264:CDS
TTCCAACTTGAGACTGGATG+CGG 0.563223 6.2:-55403055 None:intergenic
AGTCGATGTAGCAGAGGTGG+CGG 0.572655 6.2:-55402121 None:intergenic
CAGAGTTCTATATCCTTCAC+CGG 0.573477 6.2:+55404890 MS.gene98264:CDS
ATTAATCGGCAGAGTAGGAA+TGG 0.575600 6.2:-55402677 None:intergenic
TAGTTTGGGTTGTCATAGCA+AGG 0.575643 6.2:-55404946 None:intergenic
GAAGAACGTGCACAAGCTTG+CGG 0.577219 6.2:+55405225 MS.gene98264:CDS
GTCTTTAGGCTGGACTACAA+AGG 0.579932 6.2:+55403310 MS.gene98264:CDS
TCGACCAGTTGGGAAGAAGA+TGG 0.581394 6.2:+55402308 MS.gene98264:CDS
TGCACAAGCTTGCGGCATTG+AGG 0.583418 6.2:+55405233 MS.gene98264:CDS
AATCATTGAGAGCCTCAACT+CGG 0.583678 6.2:-55402239 None:intergenic
ACTGAAGCAGAAAGGAAACT+AGG 0.584857 6.2:+55404744 MS.gene98264:CDS
GAGAGTCGATGTAGCAGAGG+TGG 0.585897 6.2:-55402124 None:intergenic
TACTCTGCCGATTAATATCG+AGG 0.589627 6.2:+55402684 MS.gene98264:CDS
TCCAGTCGTTGACATTGACA+GGG 0.592334 6.2:-55402215 None:intergenic
AGAGAGAGTCGATGTAGCAG+AGG 0.593608 6.2:-55402127 None:intergenic
ACTTGAATACTGAAGCAGAA+AGG 0.595013 6.2:+55404736 MS.gene98264:CDS
TGATTTAGTGAGTCCGCAGA+TGG 0.596877 6.2:+55402389 MS.gene98264:CDS
GTACCCGTTTGAACCCCTAA+AGG 0.597654 6.2:+55403696 MS.gene98264:CDS
ATCATTGAGAGCCTCAACTC+GGG 0.599803 6.2:-55402238 None:intergenic
CAACGACTGGACCCGAGTTG+AGG 0.600329 6.2:+55402227 MS.gene98264:CDS
TCAAGAGCCGACACTGTCAT+CGG 0.603493 6.2:+55402017 MS.gene98264:CDS
GATCCTTCCGATGACAGTGT+CGG 0.605021 6.2:-55402024 None:intergenic
TGAGGCACCTTTAATAGGAG+CGG 0.608618 6.2:-55402478 None:intergenic
TATCCTTCACCGGTACCCGT+TGG 0.609544 6.2:+55404900 MS.gene98264:CDS
GCCGGTTCTAATCCGTGGGA+GGG 0.610769 6.2:+55402275 MS.gene98264:CDS
TTCGATTGGAGCTCAATGAG+CGG 0.611035 6.2:-55402189 None:intergenic
CAGCAATCAACTTAGGAGTG+TGG 0.611888 6.2:-55403264 None:intergenic
TGATTCACTGGAGAACAAGC+CGG 0.613416 6.2:+55402257 MS.gene98264:CDS
GCGGCAAATTTCACCATCTG+CGG 0.614321 6.2:-55402402 None:intergenic
ATTGCTGGATCTAGTGAGGG+TGG 0.614640 6.2:+55403280 MS.gene98264:CDS
ATACCATAATTGACAGCAAG+GGG 0.614733 6.2:-55402162 None:intergenic
ACAAGCCGGTTCTAATCCGT+GGG 0.615482 6.2:+55402271 MS.gene98264:CDS
TATTGTCGATGTCGAAGGTG+TGG 0.616371 6.2:+55402443 MS.gene98264:CDS
ATCATGGTGCAATTCTGAGT+GGG 0.620949 6.2:-55405539 None:intergenic
AGCCGGTTCTAATCCGTGGG+AGG 0.623958 6.2:+55402274 MS.gene98264:CDS
AAGTGAAGTTGAAATTGAGA+AGG 0.624126 6.2:+55402717 MS.gene98264:CDS
GAGCCGACACTGTCATCGGA+AGG 0.625324 6.2:+55402021 MS.gene98264:CDS
AGACTCACGGCTTAGAGCGG+CGG 0.625353 6.2:-55402421 None:intergenic
TAAGAAGGATCTCGAAGCTG+TGG 0.629352 6.2:+55403666 MS.gene98264:CDS
GTTGATTGCTGGATCTAGTG+AGG 0.632210 6.2:+55403276 MS.gene98264:CDS
CAATACCATAATTGACAGCA+AGG 0.634292 6.2:-55402164 None:intergenic
CGTGTAGTAATGCTCTTCTG+TGG 0.635161 6.2:+55405477 MS.gene98264:CDS
TGCCTGAACCAAGCACTGTA+CGG 0.635520 6.2:-55402361 None:intergenic
ATCATAACCAACCTGTTGTG+AGG 0.639858 6.2:-55402496 None:intergenic
AGAAGGTATTCAGATGCTCA+AGG 0.641602 6.2:+55403920 MS.gene98264:CDS
AATAGACTCACGGCTTAGAG+CGG 0.643770 6.2:-55402424 None:intergenic
TTGATTGCTGGATCTAGTGA+GGG 0.644845 6.2:+55403277 MS.gene98264:CDS
CGACATCGACAATAGACTCA+CGG 0.646093 6.2:-55402434 None:intergenic
ACTCCAAAGCCACCGTGTGG+TGG 0.646949 6.2:-55405444 None:intergenic
GAATCTTCTGCTCTAAACAC+AGG 0.652142 6.2:-55403418 None:intergenic
CATCATGGTGCAATTCTGAG+TGG 0.662521 6.2:-55405540 None:intergenic
AGATATGGTGTACCACCACA+CGG 0.671410 6.2:+55405432 MS.gene98264:intron
TATAGGTTGAAATCCAAGTG+AGG 0.674003 6.2:+55402632 MS.gene98264:intron
GCAATTCTGAGTGGGTCACG+TGG 0.689157 6.2:-55405531 None:intergenic
AATACCATAATTGACAGCAA+GGG 0.690003 6.2:-55402163 None:intergenic
TGGCGGCGGCAACTTCTCGG+CGG 0.706873 6.2:-55402104 None:intergenic
CCTACTCCAAAGCCACCGTG+TGG 0.729566 6.2:-55405447 None:intergenic
CCAGTCGTTGACATTGACAG+GGG 0.731951 6.2:-55402214 None:intergenic
AGTATCTTCCAAATACTCTG+CGG 0.740430 6.2:+55403886 MS.gene98264:intron
TATGGTGTACCACCACACGG+TGG 0.820152 6.2:+55405435 MS.gene98264:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATAATATTAGAGAAAAT+AGG - chr6.2:55403089-55403108 None:intergenic 15.0%
!! ATTATATAAATGTCATTGAA+AGG + chr6.2:55404204-55404223 MS.gene98264:intron 15.0%
!! TAACTATGATATATATAAGA+TGG + chr6.2:55404616-55404635 MS.gene98264:intron 15.0%
!! TTTCAATTTAATTCAAGAAA+AGG + chr6.2:55404427-55404446 MS.gene98264:intron 15.0%
!! TTTCTTGAATTAAATTGAAA+AGG - chr6.2:55404427-55404446 None:intergenic 15.0%
!!! GATTTTGATTTTGATTATAA+TGG + chr6.2:55402589-55402608 MS.gene98264:intron 15.0%
!! AAATTGATGAAAATGTACTT+GGG + chr6.2:55404246-55404265 MS.gene98264:intron 20.0%
!! AACCAAATAATTGTTACTAT+TGG + chr6.2:55404397-55404416 MS.gene98264:intron 20.0%
!! AATAGTAACAATTATTTGGT+TGG - chr6.2:55404398-55404417 None:intergenic 20.0%
!! AATGAATATATATACCTGAA+TGG - chr6.2:55402743-55402762 None:intergenic 20.0%
!! ACCAAATAATTGTTACTATT+GGG + chr6.2:55404398-55404417 MS.gene98264:intron 20.0%
!! GATTAAGAAACATTATTATG+AGG + chr6.2:55403492-55403511 MS.gene98264:CDS 20.0%
!! TAAATTGATGAAAATGTACT+TGG + chr6.2:55404245-55404264 MS.gene98264:intron 20.0%
!! TCAATTACAACATTTCTAAT+CGG - chr6.2:55402767-55402786 None:intergenic 20.0%
!! TGTAATTCTATTTATAGGTA+TGG + chr6.2:55404865-55404884 MS.gene98264:intron 20.0%
!!! CAATTTATTTGTTTTGTAGT+GGG + chr6.2:55403771-55403790 MS.gene98264:intron 20.0%
!!! CATTTCTTAAGTTAGTTTAT+CGG - chr6.2:55403173-55403192 None:intergenic 20.0%
!!! TCAATTTATTTGTTTTGTAG+TGG + chr6.2:55403770-55403789 MS.gene98264:intron 20.0%
!!! TCAATTTTACAAAATAGACA+GGG - chr6.2:55404047-55404066 None:intergenic 20.0%
!!! TCTATTTTGTAAAATTGAGA+GGG + chr6.2:55404049-55404068 MS.gene98264:intron 20.0%
!!! TCTGGTTATAATGATTTTAT+GGG + chr6.2:55405366-55405385 MS.gene98264:intron 20.0%
!!! TGTTGTTTTGTTTAATATAC+TGG + chr6.2:55402893-55402912 MS.gene98264:intron 20.0%
!!! TTTTATGGAAGTATCAAATT+TGG - chr6.2:55405099-55405118 None:intergenic 20.0%
! AAACAAATTAACACCTTTAG+GGG - chr6.2:55403712-55403731 None:intergenic 25.0%
! ACATTATTATGAGGTACATT+TGG + chr6.2:55403501-55403520 MS.gene98264:intron 25.0%
! AGGACATATAGTTATTTGAT+TGG + chr6.2:55404447-55404466 MS.gene98264:intron 25.0%
! ATCAGAAACAAAAAGCAAAA+AGG + chr6.2:55402044-55402063 MS.gene98264:CDS 25.0%
! CAAACAAATTAACACCTTTA+GGG - chr6.2:55403713-55403732 None:intergenic 25.0%
! CCAAATAATTGTTACTATTG+GGG + chr6.2:55404399-55404418 MS.gene98264:intron 25.0%
! GATAAACAAACAAATGTGAT+AGG + chr6.2:55403984-55404003 MS.gene98264:intron 25.0%
! GTTCAATGTCTTTGTTAATA+CGG + chr6.2:55405316-55405335 MS.gene98264:intron 25.0%
! TATAAGATTAAACTGTACAC+AGG - chr6.2:55404104-55404123 None:intergenic 25.0%
! TCGACTGTAATTCTATTTAT+AGG + chr6.2:55404860-55404879 MS.gene98264:intron 25.0%
! TGATTGATCATTTACAGATA+TGG + chr6.2:55405417-55405436 MS.gene98264:intron 25.0%
! TTCAATGTCTTTGTTAATAC+GGG + chr6.2:55405317-55405336 MS.gene98264:intron 25.0%
! TTTAAACTTCACTACAAGAT+TGG - chr6.2:55404154-55404173 None:intergenic 25.0%
! TTTAGTCATTTCATTGATGA+TGG + chr6.2:55404325-55404344 MS.gene98264:intron 25.0%
! TTTGAACACAAAATGTAAGA+AGG + chr6.2:55403651-55403670 MS.gene98264:CDS 25.0%
!! AACTTAAGAAATGCATTTTG+CGG + chr6.2:55403180-55403199 MS.gene98264:intron 25.0%
!! ACTGATACTTTTGTGTTTTT+TGG + chr6.2:55403581-55403600 MS.gene98264:intron 25.0%
!! AGTTATAAAAGATTTGAGAC+AGG - chr6.2:55404795-55404814 None:intergenic 25.0%
!! CTAAATGAGATCTCATTTTA+TGG - chr6.2:55404310-55404329 None:intergenic 25.0%
!! CTATTTTGTAAAATTGAGAG+GGG + chr6.2:55404050-55404069 MS.gene98264:intron 25.0%
!! CTCAATTTTACAAAATAGAC+AGG - chr6.2:55404048-55404067 None:intergenic 25.0%
!! CTCTGGTTATAATGATTTTA+TGG + chr6.2:55405365-55405384 MS.gene98264:intron 25.0%
!! CTGGTTATAATGATTTTATG+GGG + chr6.2:55405367-55405386 MS.gene98264:intron 25.0%
!! GTCTATTTTGTAAAATTGAG+AGG + chr6.2:55404048-55404067 MS.gene98264:intron 25.0%
!! GTTATAAAAGATTTGAGACA+GGG - chr6.2:55404794-55404813 None:intergenic 25.0%
!! GTTATGATATCTTGTTACTT+AGG + chr6.2:55402511-55402530 MS.gene98264:intron 25.0%
!! TGGAATTTTCAAAAATTGGA+GGG - chr6.2:55404378-55404397 None:intergenic 25.0%
!! TGGTTGGAATTTTCAAAAAT+TGG - chr6.2:55404382-55404401 None:intergenic 25.0%
!! TTGGAATTTTCAAAAATTGG+AGG - chr6.2:55404379-55404398 None:intergenic 25.0%
!!! CTAAAGGTGTTAATTTGTTT+GGG + chr6.2:55403712-55403731 MS.gene98264:intron 25.0%
!!! TGATCAATCATTTAGTTTTC+TGG - chr6.2:55405407-55405426 None:intergenic 25.0%
!!! TTGATTATAATGGTGTTATG+TGG + chr6.2:55402599-55402618 MS.gene98264:intron 25.0%
AAGTGAAGTTGAAATTGAGA+AGG + chr6.2:55402717-55402736 MS.gene98264:CDS 30.0%
AATACCATAATTGACAGCAA+GGG - chr6.2:55402166-55402185 None:intergenic 30.0%
AATGCTTTGGTATGACAATT+TGG + chr6.2:55405030-55405049 MS.gene98264:intron 30.0%
ACAAAGACATTGAACATGAT+AGG - chr6.2:55405311-55405330 None:intergenic 30.0%
ACACACATCTTTAATCAGAA+AGG - chr6.2:55402869-55402888 None:intergenic 30.0%
CAAAAGAGTTACTGTAGTTT+GGG - chr6.2:55404963-55404982 None:intergenic 30.0%
CAAGTTAGTGACACTTATTT+AGG + chr6.2:55404474-55404493 MS.gene98264:intron 30.0%
CCAAACAAATTAACACCTTT+AGG - chr6.2:55403714-55403733 None:intergenic 30.0%
CCCCAATAGTAACAATTATT+TGG - chr6.2:55404402-55404421 None:intergenic 30.0%
TCAAAAGAGTTACTGTAGTT+TGG - chr6.2:55404964-55404983 None:intergenic 30.0%
TTCTTAGTCATCAGAGAAAA+TGG + chr6.2:55402333-55402352 MS.gene98264:CDS 30.0%
TTTACATCAAGACTCAGAAA+AGG + chr6.2:55404580-55404599 MS.gene98264:intron 30.0%
TTTGTGAGTTGTGATTGTTT+AGG + chr6.2:55402567-55402586 MS.gene98264:intron 30.0%
! ATGTCAATATGTGGTGATTT+TGG + chr6.2:55403376-55403395 MS.gene98264:CDS 30.0%
! TATTTTGTCATGCAATGCTT+TGG + chr6.2:55405017-55405036 MS.gene98264:intron 30.0%
! TCTTAAGTTAGTTTATCGGT+AGG - chr6.2:55403169-55403188 None:intergenic 30.0%
! TGGAAGTTTAAGTACTGTTA+GGG + chr6.2:55404073-55404092 MS.gene98264:intron 30.0%
!! ATACTTTTGTGTTTTTTGGC+AGG + chr6.2:55403585-55403604 MS.gene98264:intron 30.0%
!! CCTAAAGGTGTTAATTTGTT+TGG + chr6.2:55403711-55403730 MS.gene98264:intron 30.0%
!! TAGCAAGGCATTGTATAAAA+TGG - chr6.2:55404934-55404953 None:intergenic 30.0%
!! TTCATTGATGATGGTAGTTT+GGG + chr6.2:55404334-55404353 MS.gene98264:intron 30.0%
!! TTTCATTGATGATGGTAGTT+TGG + chr6.2:55404333-55404352 MS.gene98264:intron 30.0%
!! TTTCCTCTTGTAGTTAGTTT+TGG + chr6.2:55404531-55404550 MS.gene98264:intron 30.0%
!!! ATTACTTTTCTAAAACCAGC+TGG - chr6.2:55404770-55404789 None:intergenic 30.0%
!!! GTTGATGGTGATTTTTTAAC+TGG + chr6.2:55402938-55402957 MS.gene98264:intron 30.0%
!!! TATGTGGTTTTGTTCTCTAT+AGG + chr6.2:55402615-55402634 MS.gene98264:intron 30.0%
!!! TTCCTCTTGTAGTTAGTTTT+GGG + chr6.2:55404532-55404551 MS.gene98264:intron 30.0%
AACTATTGTTGAGGAATTCC+TGG + chr6.2:55404502-55404521 MS.gene98264:intron 35.0%
ACTATTGTTGAGGAATTCCT+GGG + chr6.2:55404503-55404522 MS.gene98264:intron 35.0%
ACTTGAATACTGAAGCAGAA+AGG + chr6.2:55404736-55404755 MS.gene98264:CDS 35.0%
AGTATCTTCCAAATACTCTG+CGG + chr6.2:55403886-55403905 MS.gene98264:intron 35.0%
ATACCATAATTGACAGCAAG+GGG - chr6.2:55402165-55402184 None:intergenic 35.0%
CAAATGTGATAGGATGATGA+TGG + chr6.2:55403994-55404013 MS.gene98264:intron 35.0%
CAATACCATAATTGACAGCA+AGG - chr6.2:55402167-55402186 None:intergenic 35.0%
CACAAGCAAATGTCAATATG+TGG + chr6.2:55403367-55403386 MS.gene98264:CDS 35.0%
CACCATCAACATTCATGTAA+GGG - chr6.2:55402928-55402947 None:intergenic 35.0%
CAGAAGATTCCTTTACTCAT+AGG + chr6.2:55403431-55403450 MS.gene98264:CDS 35.0%
CTTTGTTAATACGGGTGTTT+AGG + chr6.2:55405325-55405344 MS.gene98264:intron 35.0%
GAAACTGTATTGTGTGAGTA+AGG + chr6.2:55402654-55402673 MS.gene98264:CDS 35.0%
GAAGATACTGCACATTCATA+GGG - chr6.2:55403875-55403894 None:intergenic 35.0%
GGAATTCCTCAACAATAGTT+AGG - chr6.2:55404502-55404521 None:intergenic 35.0%
TACAGGTCTTGATGTTGAAA+TGG + chr6.2:55403468-55403487 MS.gene98264:CDS 35.0%
TAGGTTCCTAACTATTGTTG+AGG + chr6.2:55404493-55404512 MS.gene98264:intron 35.0%
TCACCATCAACATTCATGTA+AGG - chr6.2:55402929-55402948 None:intergenic 35.0%
TCAGTATTCAAGTCACCAAA+AGG - chr6.2:55404729-55404748 None:intergenic 35.0%
TTACATTTCCAACTTGAGAC+TGG - chr6.2:55403064-55403083 None:intergenic 35.0%
TTAGGAGAGGAGATAATATC+AGG + chr6.2:55405171-55405190 MS.gene98264:intron 35.0%
! CCATAAAAGCTGAAGCTTTT+GGG + chr6.2:55405111-55405130 MS.gene98264:intron 35.0%
! GAGTAATGATTTTGCTTTGC+AGG + chr6.2:55404683-55404702 MS.gene98264:intron 35.0%
! GCACGCAATTAATCATGTTT+TGG + chr6.2:55405054-55405073 MS.gene98264:intron 35.0%
! GTGGAAGTTTAAGTACTGTT+AGG + chr6.2:55404072-55404091 MS.gene98264:intron 35.0%
! TAAAATGGTCTTACAGCCAA+CGG - chr6.2:55404919-55404938 None:intergenic 35.0%
! TATAGGTTGAAATCCAAGTG+AGG + chr6.2:55402632-55402651 MS.gene98264:intron 35.0%
! TCAAATTTGGAGAAGCATGA+TGG - chr6.2:55405086-55405105 None:intergenic 35.0%
! TCCATAAAAGCTGAAGCTTT+TGG + chr6.2:55405110-55405129 MS.gene98264:intron 35.0%
! TCTTTTGATGTCTTCATTCG+AGG + chr6.2:55404976-55404995 MS.gene98264:CDS 35.0%
! TTTGCGTTTGAAATTGTCGA+GGG + chr6.2:55403544-55403563 MS.gene98264:intron 35.0%
! TTTTGTAAAATTGAGAGGGG+TGG + chr6.2:55404053-55404072 MS.gene98264:intron 35.0%
!! TCATTGATGATGGTAGTTTG+GGG + chr6.2:55404335-55404354 MS.gene98264:intron 35.0%
!!! TGTAGTTAGTTTTGGGAGTT+TGG + chr6.2:55404539-55404558 MS.gene98264:intron 35.0%
!!! TTGTGTTTTTTGGCAGGTTA+TGG + chr6.2:55403591-55403610 MS.gene98264:intron 35.0%
AATCATTGAGAGCCTCAACT+CGG - chr6.2:55402242-55402261 None:intergenic 40.0%
ACTGAAGCAGAAAGGAAACT+AGG + chr6.2:55404744-55404763 MS.gene98264:CDS 40.0%
ATAACCAGAGCTCAGTAAGA+GGG - chr6.2:55405355-55405374 None:intergenic 40.0%
ATCATAACCAACCTGTTGTG+AGG - chr6.2:55402499-55402518 None:intergenic 40.0%
ATTAATCGGCAGAGTAGGAA+TGG - chr6.2:55402680-55402699 None:intergenic 40.0%
CACAATACAGTTTCCTCACT+TGG - chr6.2:55402648-55402667 None:intergenic 40.0%
CAGAGTTCTATATCCTTCAC+CGG + chr6.2:55404890-55404909 MS.gene98264:CDS 40.0%
CAGGACCAATCTCAAAAACA+CGG - chr6.2:55403402-55403421 None:intergenic 40.0%
CTACAATCAAGATGAGAGTG+TGG + chr6.2:55402801-55402820 MS.gene98264:intron 40.0%
CTAGATCCAGCAATCAACTT+AGG - chr6.2:55403274-55403293 None:intergenic 40.0%
CTATTGTTGAGGAATTCCTG+GGG + chr6.2:55404504-55404523 MS.gene98264:intron 40.0%
CTCCCAAAACTAACTACAAG+AGG - chr6.2:55404537-55404556 None:intergenic 40.0%
CTCCCTTACATGAATGTTGA+TGG + chr6.2:55402923-55402942 MS.gene98264:intron 40.0%
GAAAATGTACTTGGGTAGAC+AGG + chr6.2:55404254-55404273 MS.gene98264:intron 40.0%
GACAGGGATAAAAGACGTAA+AGG - chr6.2:55404031-55404050 None:intergenic 40.0%
GACATTTGCTTGTGAAGTTG+AGG - chr6.2:55403361-55403380 None:intergenic 40.0%
GCACGTTCTTCCAAAAATTC+AGG - chr6.2:55405216-55405235 None:intergenic 40.0%
GCAGCATCCTCGATATTAAT+CGG - chr6.2:55402694-55402713 None:intergenic 40.0%
GGAAGATACTGCACATTCAT+AGG - chr6.2:55403876-55403895 None:intergenic 40.0%
TACAAGAGGAAAAATACCCC+AGG - chr6.2:55404523-55404542 None:intergenic 40.0%
TATAACCAGAGCTCAGTAAG+AGG - chr6.2:55405356-55405375 None:intergenic 40.0%
TCGATATTAATCGGCAGAGT+AGG - chr6.2:55402685-55402704 None:intergenic 40.0%
TCTTTAGGCTGGACTACAAA+GGG + chr6.2:55403311-55403330 MS.gene98264:CDS 40.0%
TGAAATTGAGAAGGCCATTC+AGG + chr6.2:55402726-55402745 MS.gene98264:CDS 40.0%
TTGATTGCTGGATCTAGTGA+GGG + chr6.2:55403277-55403296 MS.gene98264:CDS 40.0%
! AAAATGGTCTTACAGCCAAC+GGG - chr6.2:55404918-55404937 None:intergenic 40.0%
! AACACCTTTAGGGGTTCAAA+CGG - chr6.2:55403703-55403722 None:intergenic 40.0%
! ACAACTTGTTCGTGTGAATC+AGG + chr6.2:55402974-55402993 MS.gene98264:CDS 40.0%
! ATGCATTTTGCGGTGTGATA+CGG + chr6.2:55403190-55403209 MS.gene98264:intron 40.0%
! CCCAAAAGCTTCAGCTTTTA+TGG - chr6.2:55405114-55405133 None:intergenic 40.0%
! CTATGCAATCCTTGTTGCTT+AGG + chr6.2:55405153-55405172 MS.gene98264:intron 40.0%
! GAATCTTCTGCTCTAAACAC+AGG - chr6.2:55403421-55403440 None:intergenic 40.0%
! GATTTTGCTTTGCAGGAAGT+TGG + chr6.2:55404690-55404709 MS.gene98264:intron 40.0%
! GGAGTAGAGATTGAACCTTT+TGG + chr6.2:55404711-55404730 MS.gene98264:CDS 40.0%
! GTTGCTGCTTGTAAGTTTGT+TGG + chr6.2:55403135-55403154 MS.gene98264:intron 40.0%
! GTTTGCGTTTGAAATTGTCG+AGG + chr6.2:55403543-55403562 MS.gene98264:intron 40.0%
! TACTCTGCCGATTAATATCG+AGG + chr6.2:55402684-55402703 MS.gene98264:CDS 40.0%
! TATCCACGTGCCTGAATTTT+TGG + chr6.2:55405203-55405222 MS.gene98264:CDS 40.0%
! TATGTAAGCCGCAGAGTATT+TGG - chr6.2:55403897-55403916 None:intergenic 40.0%
! TGTTGTGAGGCACCTTTAAT+AGG - chr6.2:55402486-55402505 None:intergenic 40.0%
!! AGAAGGTATTCAGATGCTCA+AGG + chr6.2:55403920-55403939 MS.gene98264:CDS 40.0%
!! ATGTGATAGGATGATGATGG+CGG + chr6.2:55403997-55404016 MS.gene98264:intron 40.0%
!! CGGAAAATTCCTTGATTTGC+TGG - chr6.2:55403038-55403057 None:intergenic 40.0%
!! CTGCTTACATCGATTCTTTC+AGG + chr6.2:55405268-55405287 MS.gene98264:CDS 40.0%
!! TAGTTTGGGTTGTCATAGCA+AGG - chr6.2:55404949-55404968 None:intergenic 40.0%
!! TATTAAAGGTGCCTCACAAC+AGG + chr6.2:55402485-55402504 MS.gene98264:CDS 40.0%
!!! ATTTTTTAACTGGTGCAGGC+TGG + chr6.2:55402948-55402967 MS.gene98264:intron 40.0%
!!! GGTGATTTTTTAACTGGTGC+AGG + chr6.2:55402944-55402963 MS.gene98264:intron 40.0%
!!! TTTGGCCGTGTTTTTGAGAT+TGG + chr6.2:55403394-55403413 MS.gene98264:CDS 40.0%
AAGCAAAAAGGCCTCCAAGA+AGG + chr6.2:55402056-55402075 MS.gene98264:CDS 45.0%
AATAGACTCACGGCTTAGAG+CGG - chr6.2:55402427-55402446 None:intergenic 45.0%
AGATATGGTGTACCACCACA+CGG + chr6.2:55405432-55405451 MS.gene98264:intron 45.0%
ATCATTGAGAGCCTCAACTC+GGG - chr6.2:55402241-55402260 None:intergenic 45.0%
ATCTCCTCTCCTAAGCAACA+AGG - chr6.2:55405165-55405184 None:intergenic 45.0%
ATCTGCGGACTCACTAAATC+AGG - chr6.2:55402390-55402409 None:intergenic 45.0%
ATTCCAGCCGCTCCTATTAA+AGG + chr6.2:55402471-55402490 MS.gene98264:CDS 45.0%
CACAAGCTATTCGACCAGTT+GGG + chr6.2:55402298-55402317 MS.gene98264:CDS 45.0%
CAGCAATCAACTTAGGAGTG+TGG - chr6.2:55403267-55403286 None:intergenic 45.0%
CGACATCGACAATAGACTCA+CGG - chr6.2:55402437-55402456 None:intergenic 45.0%
CGTGTAGTAATGCTCTTCTG+TGG + chr6.2:55405477-55405496 MS.gene98264:CDS 45.0%
CTGCGGCTTACATATGAAGA+AGG + chr6.2:55403903-55403922 MS.gene98264:CDS 45.0%
CTTCCAAAAATTCAGGCACG+TGG - chr6.2:55405209-55405228 None:intergenic 45.0%
GAGTCTATTGTCGATGTCGA+AGG + chr6.2:55402438-55402457 MS.gene98264:CDS 45.0%
GCACAGATGCCTATGAGTAA+AGG - chr6.2:55403443-55403462 None:intergenic 45.0%
GTCTTTAGGCTGGACTACAA+AGG + chr6.2:55403310-55403329 MS.gene98264:CDS 45.0%
GTTGATTGCTGGATCTAGTG+AGG + chr6.2:55403276-55403295 MS.gene98264:CDS 45.0%
TAACCAGAGCTCAGTAAGAG+GGG - chr6.2:55405354-55405373 None:intergenic 45.0%
TAAGAAGGATCTCGAAGCTG+TGG + chr6.2:55403666-55403685 MS.gene98264:CDS 45.0%
TATTGTCGATGTCGAAGGTG+TGG + chr6.2:55402443-55402462 MS.gene98264:CDS 45.0%
TCATTACTCGCTGCAAGACA+AGG - chr6.2:55404672-55404691 None:intergenic 45.0%
TCCAGTCGTTGACATTGACA+GGG - chr6.2:55402218-55402237 None:intergenic 45.0%
TGAGGCTCTCAATGATTCAC+TGG + chr6.2:55402245-55402264 MS.gene98264:CDS 45.0%
TGATTCACTGGAGAACAAGC+CGG + chr6.2:55402257-55402276 MS.gene98264:CDS 45.0%
TGATTTAGTGAGTCCGCAGA+TGG + chr6.2:55402389-55402408 MS.gene98264:CDS 45.0%
TTCCAACTTGAGACTGGATG+CGG - chr6.2:55403058-55403077 None:intergenic 45.0%
TTCGATTGGAGCTCAATGAG+CGG - chr6.2:55402192-55402211 None:intergenic 45.0%
TTTAATAGGAGCGGCTGGAA+TGG - chr6.2:55402472-55402491 None:intergenic 45.0%
! ACACCTTTAGGGGTTCAAAC+GGG - chr6.2:55403702-55403721 None:intergenic 45.0%
! CAATCCTTGTTGCTTAGGAG+AGG + chr6.2:55405158-55405177 MS.gene98264:intron 45.0%
! GATCCCCTTGCTGTCAATTA+TGG + chr6.2:55402159-55402178 MS.gene98264:CDS 45.0%
! TGAGGCACCTTTAATAGGAG+CGG - chr6.2:55402481-55402500 None:intergenic 45.0%
!! CACACTCCTAAGTTGATTGC+TGG + chr6.2:55403265-55403284 MS.gene98264:CDS 45.0%
AACGCCATCTTCTTCCCAAC+TGG - chr6.2:55402315-55402334 None:intergenic 50.0%
AGAAAGGAAACTAGGCCAGC+TGG + chr6.2:55404752-55404771 MS.gene98264:CDS 50.0%
AGAGAGAGTCGATGTAGCAG+AGG - chr6.2:55402130-55402149 None:intergenic 50.0%
AGGCATCTGTGCGAGTTTAC+AGG + chr6.2:55403451-55403470 MS.gene98264:CDS 50.0%
ATTGCTGGATCTAGTGAGGG+TGG + chr6.2:55403280-55403299 MS.gene98264:CDS 50.0%
CATTGACAGGGGTCTTCGAT+TGG - chr6.2:55402206-55402225 None:intergenic 50.0%
CCAGTCGTTGACATTGACAG+GGG - chr6.2:55402217-55402236 None:intergenic 50.0%
CTGCGAACACCAGCAAATCA+AGG + chr6.2:55403026-55403045 MS.gene98264:CDS 50.0%
GAAGAACGTGCACAAGCTTG+CGG + chr6.2:55405225-55405244 MS.gene98264:CDS 50.0%
GATCCTTCCGATGACAGTGT+CGG - chr6.2:55402027-55402046 None:intergenic 50.0%
GCACAAGCTATTCGACCAGT+TGG + chr6.2:55402297-55402316 MS.gene98264:CDS 50.0%
GCGGCAAATTTCACCATCTG+CGG - chr6.2:55402405-55402424 None:intergenic 50.0%
GTACCCGTTTGAACCCCTAA+AGG + chr6.2:55403696-55403715 MS.gene98264:CDS 50.0%
GTCCAGTCGTTGACATTGAC+AGG - chr6.2:55402219-55402238 None:intergenic 50.0%
TCAAGAGCCGACACTGTCAT+CGG + chr6.2:55402017-55402036 MS.gene98264:CDS 50.0%
TCGACCAGTTGGGAAGAAGA+TGG + chr6.2:55402308-55402327 MS.gene98264:CDS 50.0%
TCGATTGGAGCTCAATGAGC+GGG - chr6.2:55402191-55402210 None:intergenic 50.0%
TGGTTTCACCGTACAGTGCT+TGG + chr6.2:55402353-55402372 MS.gene98264:CDS 50.0%
TTCCGCATCCAGTCTCAAGT+TGG + chr6.2:55403053-55403072 MS.gene98264:CDS 50.0%
TTGCGGTGTGATACGGTGTT+GGG + chr6.2:55403197-55403216 MS.gene98264:intron 50.0%
TTTGCGGTGTGATACGGTGT+TGG + chr6.2:55403196-55403215 MS.gene98264:intron 50.0%
! AACAAGCCGGTTCTAATCCG+TGG + chr6.2:55402270-55402289 MS.gene98264:CDS 50.0%
! ACAAGCCGGTTCTAATCCGT+GGG + chr6.2:55402271-55402290 MS.gene98264:CDS 50.0%
! TGCCTGAACCAAGCACTGTA+CGG - chr6.2:55402364-55402383 None:intergenic 50.0%
!! AAAGGTGCCTCACAACAGGT+TGG + chr6.2:55402489-55402508 MS.gene98264:intron 50.0%
!! CTTGATTTGCTGGTGTTCGC+AGG - chr6.2:55403028-55403047 None:intergenic 50.0%
!!! GCGTTGCTTTTCCAGCTTTG+CGG - chr6.2:55402085-55402104 None:intergenic 50.0%
AGGGTGGAGCTGCTGTCTTT+AGG + chr6.2:55403296-55403315 MS.gene98264:CDS 55.0%
AGTCGATGTAGCAGAGGTGG+CGG - chr6.2:55402124-55402143 None:intergenic 55.0%
CAAGAAGGATGCCGCAAAGC+TGG + chr6.2:55402071-55402090 MS.gene98264:CDS 55.0%
CACCGTACAGTGCTTGGTTC+AGG + chr6.2:55402359-55402378 MS.gene98264:CDS 55.0%
CAGCTTTGCGGCATCCTTCT+TGG - chr6.2:55402073-55402092 None:intergenic 55.0%
CCCCTGTCAATGTCAACGAC+TGG + chr6.2:55402214-55402233 MS.gene98264:CDS 55.0%
CTTTGCGGCATCCTTCTTGG+AGG - chr6.2:55402070-55402089 None:intergenic 55.0%
GAAGTTGAGGTGACTGAGCC+AGG - chr6.2:55403348-55403367 None:intergenic 55.0%
GAGAGTCGATGTAGCAGAGG+TGG - chr6.2:55402127-55402146 None:intergenic 55.0%
GCAATTCTGAGTGGGTCACG+TGG - chr6.2:55405534-55405553 None:intergenic 55.0%
GCACCTTTAATAGGAGCGGC+TGG - chr6.2:55402477-55402496 None:intergenic 55.0%
GTCTTACAGCCAACGGGTAC+CGG - chr6.2:55404912-55404931 None:intergenic 55.0%
TATCCTTCACCGGTACCCGT+TGG + chr6.2:55404900-55404919 MS.gene98264:CDS 55.0%
TATGGTGTACCACCACACGG+TGG + chr6.2:55405435-55405454 MS.gene98264:CDS 55.0%
TGCACAAGCTTGCGGCATTG+AGG + chr6.2:55405233-55405252 MS.gene98264:CDS 55.0%
TGGAGCTGCTGTCTTTAGGC+TGG + chr6.2:55403300-55403319 MS.gene98264:CDS 55.0%
! GAATAGCTTGTGCCCTCCCA+CGG - chr6.2:55402290-55402309 None:intergenic 55.0%
! GGTGTGATACGGTGTTGGGT+AGG + chr6.2:55403201-55403220 MS.gene98264:intron 55.0%
ACTCCAAAGCCACCGTGTGG+TGG - chr6.2:55405447-55405466 None:intergenic 60.0%
AGACTCACGGCTTAGAGCGG+CGG - chr6.2:55402424-55402443 None:intergenic 60.0%
CAAAGGGCAACCTGCATGCC+TGG + chr6.2:55403327-55403346 MS.gene98264:CDS 60.0%
CAACGACTGGACCCGAGTTG+AGG + chr6.2:55402227-55402246 MS.gene98264:CDS 60.0%
CCTACTCCAAAGCCACCGTG+TGG - chr6.2:55405450-55405469 None:intergenic 60.0%
CTGCCCCTCTTACTGAGCTC+TGG + chr6.2:55405348-55405367 MS.gene98264:intron 60.0%
GAGCCGACACTGTCATCGGA+AGG + chr6.2:55402021-55402040 MS.gene98264:CDS 60.0%
GTACCACCACACGGTGGCTT+TGG + chr6.2:55405441-55405460 MS.gene98264:CDS 60.0%
! AGCCGGTTCTAATCCGTGGG+AGG + chr6.2:55402274-55402293 MS.gene98264:CDS 60.0%
! GCCGGTTCTAATCCGTGGGA+GGG + chr6.2:55402275-55402294 MS.gene98264:CDS 60.0%
!! CCACACGGTGGCTTTGGAGT+AGG + chr6.2:55405447-55405466 MS.gene98264:CDS 60.0%
!! CGGTGGCTTTGGAGTAGGCT+TGG + chr6.2:55405452-55405471 MS.gene98264:CDS 60.0%
!! GCCCTCCCACGGATTAGAAC+CGG - chr6.2:55402279-55402298 None:intergenic 60.0%
GGTGACTGAGCCAGGCATGC+AGG - chr6.2:55403340-55403359 None:intergenic 65.0%
! AGGTGGCGGCGGCAACTTCT+CGG - chr6.2:55402110-55402129 None:intergenic 65.0%
! CGATGTAGCAGAGGTGGCGG+CGG - chr6.2:55402121-55402140 None:intergenic 65.0%
!! CAGCCAACGGGTACCGGTGA+AGG - chr6.2:55404906-55404925 None:intergenic 65.0%
TGGCGGCGGCAACTTCTCGG+CGG - chr6.2:55402107-55402126 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 55402000 55405560 55402000 ID=MS.gene98264
chr6.2 mRNA 55402000 55405560 55402000 ID=MS.gene98264.t1;Parent=MS.gene98264
chr6.2 exon 55402000 55402506 55402000 ID=MS.gene98264.t1.exon1;Parent=MS.gene98264.t1
chr6.2 CDS 55402000 55402506 55402000 ID=cds.MS.gene98264.t1;Parent=MS.gene98264.t1
chr6.2 exon 55402637 55402747 55402637 ID=MS.gene98264.t1.exon2;Parent=MS.gene98264.t1
chr6.2 CDS 55402637 55402747 55402637 ID=cds.MS.gene98264.t1;Parent=MS.gene98264.t1
chr6.2 exon 55402966 55403079 55402966 ID=MS.gene98264.t1.exon3;Parent=MS.gene98264.t1
chr6.2 CDS 55402966 55403079 55402966 ID=cds.MS.gene98264.t1;Parent=MS.gene98264.t1
chr6.2 exon 55403223 55403513 55403223 ID=MS.gene98264.t1.exon4;Parent=MS.gene98264.t1
chr6.2 CDS 55403223 55403513 55403223 ID=cds.MS.gene98264.t1;Parent=MS.gene98264.t1
chr6.2 exon 55403607 55403717 55403607 ID=MS.gene98264.t1.exon5;Parent=MS.gene98264.t1
chr6.2 CDS 55403607 55403717 55403607 ID=cds.MS.gene98264.t1;Parent=MS.gene98264.t1
chr6.2 exon 55403888 55403941 55403888 ID=MS.gene98264.t1.exon6;Parent=MS.gene98264.t1
chr6.2 CDS 55403888 55403941 55403888 ID=cds.MS.gene98264.t1;Parent=MS.gene98264.t1
chr6.2 exon 55404705 55404784 55404705 ID=MS.gene98264.t1.exon7;Parent=MS.gene98264.t1
chr6.2 CDS 55404705 55404784 55404705 ID=cds.MS.gene98264.t1;Parent=MS.gene98264.t1
chr6.2 exon 55404882 55404997 55404882 ID=MS.gene98264.t1.exon8;Parent=MS.gene98264.t1
chr6.2 CDS 55404882 55404997 55404882 ID=cds.MS.gene98264.t1;Parent=MS.gene98264.t1
chr6.2 exon 55405175 55405289 55405175 ID=MS.gene98264.t1.exon9;Parent=MS.gene98264.t1
chr6.2 CDS 55405175 55405289 55405175 ID=cds.MS.gene98264.t1;Parent=MS.gene98264.t1
chr6.2 exon 55405434 55405560 55405434 ID=MS.gene98264.t1.exon10;Parent=MS.gene98264.t1
chr6.2 CDS 55405434 55405560 55405434 ID=cds.MS.gene98264.t1;Parent=MS.gene98264.t1
Gene Sequence

>MS.gene98264

ATGTCAACTTCAGAATCTCAAGAGCCGACACTGTCATCGGAAGGATCAGAAACAAAAAGCAAAAAGGCCTCCAAGAAGGATGCCGCAAAGCTGGAAAAGCAACGCCGCCGAGAAGTTGCCGCCGCCACCTCTGCTACATCGACTCTCTCTGTCGAAGATGATCCCCTTGCTGTCAATTATGGTATTGTCCCGCTCATTGAGCTCCAATCGAAGACCCCTGTCAATGTCAACGACTGGACCCGAGTTGAGGCTCTCAATGATTCACTGGAGAACAAGCCGGTTCTAATCCGTGGGAGGGCACAAGCTATTCGACCAGTTGGGAAGAAGATGGCGTTCTTAGTCATCAGAGAAAATGGTTTCACCGTACAGTGCTTGGTTCAGGCACAACCTGATTTAGTGAGTCCGCAGATGGTGAAATTTGCCGCCGCTCTAAGCCGTGAGTCTATTGTCGATGTCGAAGGTGTGGTTTCCATTCCAGCCGCTCCTATTAAAGGTGCCTCACAACAGGTTGGTTATGATATCTTGTTACTTAGGTTTTGTGATTTTGTCAGTGTTTTGAATTTAGAGTTTGTGAGTTGTGATTGTTTAGGATTTTGATTTTGATTATAATGGTGTTATGTGGTTTTGTTCTCTATAGGTTGAAATCCAAGTGAGGAAACTGTATTGTGTGAGTAAGGCCATTCCTACTCTGCCGATTAATATCGAGGATGCTGCTCGAAGTGAAGTTGAAATTGAGAAGGCCATTCAGGTATATATATTCATTACCGATTAGAAATGTTGTAATTGAAGTTGTAGCAAACACTACAATCAAGATGAGAGTGTGGTGTTTCAGCTGCAATTACTATCTTGCATGTCGCAGTTTAAAACCTTTCTGATTAAAGATGTGTGTTTGTTGTTGTTTTGTTTAATATACTGGAACTTGTCTCCCTTACATGAATGTTGATGGTGATTTTTTAACTGGTGCAGGCTGGTGAACAACTTGTTCGTGTGAATCAGGATACACGATTGAATTTTAGAGTACTTGACCTGCGAACACCAGCAAATCAAGGAATTTTCCGCATCCAGTCTCAAGTTGGAAATGTAAAGCCTATTTTCTCTAATATTATTCTGACAAGTTTTTTTTTATTTAATCATAGTTGCTGCTTGTAAGTTTGTTGGAATAATTGCCTACCGATAAACTAACTTAAGAAATGCATTTTGCGGTGTGATACGGTGTTGGGTAGGCGTTCAGACAATTTTTATTAGCTGAAAGCTTTGTTGAAATCCACACTCCTAAGTTGATTGCTGGATCTAGTGAGGGTGGAGCTGCTGTCTTTAGGCTGGACTACAAAGGGCAACCTGCATGCCTGGCTCAGTCACCTCAACTTCACAAGCAAATGTCAATATGTGGTGATTTTGGCCGTGTTTTTGAGATTGGTCCTGTGTTTAGAGCAGAAGATTCCTTTACTCATAGGCATCTGTGCGAGTTTACAGGTCTTGATGTTGAAATGGAGATTAAGAAACATTATTATGAGGTACATTTGGCTAAATGAAAATTTTGAGTGTTTGCGTTTGAAATTGTCGAGGGACATAATATGATTTACTGATACTTTTGTGTTTTTTGGCAGGTTATGGATGTAGTTGACAAATTGTTTGTTGCTATGTTTGACACTTTGAACACAAAATGTAAGAAGGATCTCGAAGCTGTGGCAAATCAGTACCCGTTTGAACCCCTAAAGGTGTTAATTTGTTTGGGATTTGTTATTTATTATACTATCTGTTTCATATTGTTCAATTTATTTGTTTTGTAGTGGGTATATCATGTTTATTTGTGCAATATACTAATATTAGACGCAAATGAATGCATTGTTACATTTTGTGATCTGATTATATCCCTATGAATGTGCAGTATCTTCCAAATACTCTGCGGCTTACATATGAAGAAGGTATTCAGATGCTCAAGGTAAGCTTAAATATTTCTTAACTAATTAACTTGCAAGTTGTCGATAAACAAACAAATGTGATAGGATGATGATGGCGGTGCTTGAACCTTTACGTCTTTTATCCCTGTCTATTTTGTAAAATTGAGAGGGGTGGAAGTTTAAGTACTGTTAGGGACTAGCCTGTGTACAGTTTAATCTTATAGATTATCATACTGAATATTCACTCTCACCAATCTTGTAGTGAAGTTTAAAATTATGTAATAGTCAAATTATTGAAACTATATTATATAAATGTCATTGAAAGGTGATAGTGATACATAATGTAAATTGATGAAAATGTACTTGGGTAGACAGGATACTAGAACTAATGTCAGCTTAAGATTGTCCATAAAATGAGATCTCATTTAGTCATTTCATTGATGATGGTAGTTTGGGGAACAAATAAAAGCTTTACCCTCCAATTTTTGAAAATTCCAACCAAATAATTGTTACTATTGGGGAGCCTTTTCAATTTAATTCAAGAAAAGGACATATAGTTATTTGATTGGTGAGCAAGTTAGTGACACTTATTTAGGTTCCTAACTATTGTTGAGGAATTCCTGGGGTATTTTTCCTCTTGTAGTTAGTTTTGGGAGTTTGGTTGCACTGTTTAGAATCATTTACATCAAGACTCAGAAAAGGACTTATTCTACTGTAACTATGATATATATAAGATGGTAGAAATTTACAGTATTCTTGTCTTAGTATCCTTGTCTTGCAGCGAGTAATGATTTTGCTTTGCAGGAAGTTGGAGTAGAGATTGAACCTTTTGGTGACTTGAATACTGAAGCAGAAAGGAAACTAGGCCAGCTGGTTTTAGAAAAGTAATTCCCTGTCTCAAATCTTTTATAACTAAATATTGTCTTTTGTTATTATATGCTATAATTTAAAATTGTTTTTCGACTGTAATTCTATTTATAGGTATGGAACAGAGTTCTATATCCTTCACCGGTACCCGTTGGCTGTAAGACCATTTTATACAATGCCTTGCTATGACAACCCAAACTACAGTAACTCTTTTGATGTCTTCATTCGAGGTAAGCAGAGAAATTAAGTTATTTTGTCATGCAATGCTTTGGTATGACAATTTGGTGCACGCAATTAATCATGTTTTGGTTTGAACCATCATGCTTCTCCAAATTTGATACTTCCATAAAAGCTGAAGCTTTTGGGTGTCATTTGATTTTAACTTCTATGCAATCCTTGTTGCTTAGGAGAGGAGATAATATCAGGAGCTCAGCGTATCCACGTGCCTGAATTTTTGGAAGAACGTGCACAAGCTTGCGGCATTGAGGTCAAGACAATATCTGCTTACATCGATTCTTTCAGGTAATATATTTACTTATTCCTATCATGTTCAATGTCTTTGTTAATACGGGTGTTTAGGCTGCCCCTCTTACTGAGCTCTGGTTATAATGATTTTATGGGGTAAAAGATTGCTTACCAGAAAACTAAATGATTGATCATTTACAGATATGGTGTACCACCACACGGTGGCTTTGGAGTAGGCTTGGAGCGTGTAGTAATGCTCTTCTGTGGCTTGAACAACATTCGCAAAACATCACTTTATCCACGTGACCCACTCAGAATTGCACCATGA
Protein sequence

>MS.gene98264.t1

MSTSESQEPTLSSEGSETKSKKASKKDAAKLEKQRRREVAAATSATSTLSVEDDPLAVNYGIVPLIELQSKTPVNVNDWTRVEALNDSLENKPVLIRGRAQAIRPVGKKMAFLVIRENGFTVQCLVQAQPDLVSPQMVKFAAALSRESIVDVEGVVSIPAAPIKGASQQVEIQVRKLYCVSKAIPTLPINIEDAARSEVEIEKAIQAGEQLVRVNQDTRLNFRVLDLRTPANQGIFRIQSQVGNAFRQFLLAESFVEIHTPKLIAGSSEGGAAVFRLDYKGQPACLAQSPQLHKQMSICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKKHYYEVMDVVDKLFVAMFDTLNTKCKKDLEAVANQYPFEPLKYLPNTLRLTYEEGIQMLKEVGVEIEPFGDLNTEAERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCYDNPNYSNSFDVFIRGEEIISGAQRIHVPEFLEERAQACGIEVKTISAYIDSFRYGVPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP