Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67847.t1 | XP_003594656.2 | 93.3 | 418 | 15 | 3 | 1 | 417 | 1 | 406 | 2.40E-209 | 738 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67847.t1 | P29344 | 73.3 | 419 | 96 | 3 | 3 | 416 | 1 | 408 | 3.6e-166 | 585.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67847.t1 | G7IL22 | 93.3 | 418 | 15 | 3 | 1 | 417 | 1 | 406 | 1.7e-209 | 738.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene67847 | 0.816158 | 6.39E-52 | -1.69E-46 |
| MS.gene049614 | MS.gene67847 | 0.800446 | 1.44E-48 | -1.69E-46 |
| MS.gene049758 | MS.gene67847 | 0.81617 | 6.35E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene67847 | 0.837245 | 5.82E-57 | -1.69E-46 |
| MS.gene050301 | MS.gene67847 | 0.828192 | 1.03E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene67847 | 0.840177 | 1.02E-57 | -1.69E-46 |
| MS.gene050767 | MS.gene67847 | 0.853974 | 1.68E-61 | -1.69E-46 |
| MS.gene050770 | MS.gene67847 | 0.854599 | 1.11E-61 | -1.69E-46 |
| MS.gene050812 | MS.gene67847 | 0.821732 | 3.45E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene67847 | 0.812302 | 4.54E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene67847 | 0.812633 | 3.84E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene67847 | 0.841028 | 6.09E-58 | -1.69E-46 |
| MS.gene051666 | MS.gene67847 | 0.825746 | 3.96E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene67847 | 0.846785 | 1.75E-59 | -1.69E-46 |
| MS.gene052290 | MS.gene67847 | 0.833963 | 3.94E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene67847 | 0.81577 | 7.80E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene67847 | 0.852572 | 4.23E-61 | -1.69E-46 |
| MS.gene052379 | MS.gene67847 | 0.808331 | 3.26E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene67847 | 0.83407 | 3.71E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene67847 | 0.83006 | 3.63E-55 | -1.69E-46 |
| MS.gene053107 | MS.gene67847 | 0.801644 | 8.17E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene67847 | 0.808916 | 2.45E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene67847 | 0.850065 | 2.16E-60 | -1.69E-46 |
| MS.gene053971 | MS.gene67847 | 0.802914 | 4.47E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene67847 | 0.829081 | 6.28E-55 | -1.69E-46 |
| MS.gene054376 | MS.gene67847 | 0.816652 | 4.95E-52 | -1.69E-46 |
| MS.gene05455 | MS.gene67847 | 0.81689 | 4.38E-52 | -1.69E-46 |
| MS.gene054802 | MS.gene67847 | 0.842846 | 2.02E-58 | -1.69E-46 |
| MS.gene054803 | MS.gene67847 | 0.841445 | 4.73E-58 | -1.69E-46 |
| MS.gene054804 | MS.gene67847 | 0.843774 | 1.14E-58 | -1.69E-46 |
| MS.gene055254 | MS.gene67847 | 0.817945 | 2.53E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene67847 | 0.836302 | 1.01E-56 | -1.69E-46 |
| MS.gene055390 | MS.gene67847 | 0.848019 | 8.00E-60 | -1.69E-46 |
| MS.gene055397 | MS.gene67847 | 0.812368 | 4.39E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene67847 | 0.818609 | 1.79E-52 | -1.69E-46 |
| MS.gene055428 | MS.gene67847 | 0.802457 | 5.56E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene67847 | 0.810342 | 1.21E-50 | -1.69E-46 |
| MS.gene055896 | MS.gene67847 | 0.80183 | 7.48E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene67847 | 0.82007 | 8.33E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene67847 | 0.833576 | 4.93E-56 | -1.69E-46 |
| MS.gene056410 | MS.gene67847 | 0.818825 | 1.60E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene67847 | 0.80307 | 4.15E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene67847 | 0.807029 | 6.17E-50 | -1.69E-46 |
| MS.gene056796 | MS.gene67847 | 0.800877 | 1.17E-48 | -1.69E-46 |
| MS.gene057011 | MS.gene67847 | 0.825454 | 4.65E-54 | -1.69E-46 |
| MS.gene057032 | MS.gene67847 | 0.840225 | 9.88E-58 | -1.69E-46 |
| MS.gene057129 | MS.gene67847 | 0.864334 | 1.31E-64 | -1.69E-46 |
| MS.gene057295 | MS.gene67847 | 0.839519 | 1.51E-57 | -1.69E-46 |
| MS.gene057926 | MS.gene67847 | 0.800439 | 1.44E-48 | -1.69E-46 |
| MS.gene058006 | MS.gene67847 | 0.80822 | 3.45E-50 | -1.69E-46 |
| MS.gene058082 | MS.gene67847 | 0.820125 | 8.09E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene67847 | 0.813403 | 2.61E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene67847 | 0.944013 | 4.24E-103 | -1.69E-46 |
| MS.gene058323 | MS.gene67847 | 0.836107 | 1.14E-56 | -1.69E-46 |
| MS.gene058365 | MS.gene67847 | 0.821942 | 3.09E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene67847 | 0.846345 | 2.30E-59 | -1.69E-46 |
| MS.gene058787 | MS.gene67847 | 0.839579 | 1.46E-57 | -1.69E-46 |
| MS.gene059326 | MS.gene67847 | 0.808434 | 3.10E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene67847 | 0.809781 | 1.60E-50 | -1.69E-46 |
| MS.gene05959 | MS.gene67847 | 0.805652 | 1.20E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene67847 | 0.832817 | 7.61E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene67847 | 0.801875 | 7.32E-49 | -1.69E-46 |
| MS.gene059692 | MS.gene67847 | 0.826616 | 2.46E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene67847 | 0.829025 | 6.48E-55 | -1.69E-46 |
| MS.gene059708 | MS.gene67847 | 0.827717 | 1.34E-54 | -1.69E-46 |
| MS.gene059894 | MS.gene67847 | 0.811529 | 6.69E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene67847 | 0.867645 | 1.17E-65 | -1.69E-46 |
| MS.gene060193 | MS.gene67847 | 0.831778 | 1.38E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene67847 | 0.808058 | 3.73E-50 | -1.69E-46 |
| MS.gene06090 | MS.gene67847 | 0.828272 | 9.86E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene67847 | 0.800431 | 1.45E-48 | -1.69E-46 |
| MS.gene061049 | MS.gene67847 | 0.802667 | 5.03E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene67847 | -0.8193 | 1.25E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene67847 | 0.848451 | 6.08E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67847.t1 | MTR_2g033020 | 93.301 | 418 | 15 | 3 | 1 | 417 | 1 | 406 | 0.0 | 780 |
| MS.gene67847.t1 | MTR_1g097610 | 30.244 | 205 | 134 | 4 | 170 | 368 | 275 | 476 | 4.73e-23 | 101 |
| MS.gene67847.t1 | MTR_3g084860 | 27.368 | 190 | 120 | 3 | 172 | 343 | 94 | 283 | 3.52e-17 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67847.t1 | AT5G30510 | 68.396 | 424 | 113 | 3 | 3 | 416 | 1 | 413 | 0.0 | 590 |
| MS.gene67847.t1 | AT1G71720 | 33.171 | 205 | 128 | 4 | 170 | 368 | 261 | 462 | 3.21e-24 | 105 |
| MS.gene67847.t1 | AT3G23700 | 31.667 | 180 | 105 | 4 | 182 | 343 | 97 | 276 | 7.64e-22 | 97.1 |
| MS.gene67847.t1 | AT1G71720 | 32.500 | 160 | 100 | 3 | 170 | 323 | 261 | 418 | 6.72e-17 | 82.8 |
| MS.gene67847.t1 | AT5G14580 | 39.806 | 103 | 51 | 3 | 242 | 343 | 660 | 752 | 1.37e-11 | 67.0 |
| MS.gene67847.t1 | AT3G11964 | 28.758 | 153 | 100 | 4 | 265 | 413 | 1431 | 1578 | 4.39e-11 | 65.9 |
| MS.gene67847.t1 | AT3G11964 | 28.758 | 153 | 100 | 4 | 265 | 413 | 1455 | 1602 | 4.48e-11 | 65.9 |
Find 125 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCTTGCTGGTTTGGTTTC+AGG | 0.113129 | 2.4:-57569226 | MS.gene67847:CDS |
| CAGGGCGTCTTTGTTGTTTA+TGG | 0.142595 | 2.4:+57570680 | None:intergenic |
| CTGGTTTGGTTTCAGGTTAA+GGG | 0.265794 | 2.4:-57569219 | MS.gene67847:CDS |
| AGGGCGTCTTTGTTGTTTAT+GGG | 0.287159 | 2.4:+57570681 | None:intergenic |
| GCTGGTTTGGTTTCAGGTTA+AGG | 0.291495 | 2.4:-57569220 | MS.gene67847:CDS |
| AACAACTGACCAGCACAAAA+TGG | 0.311514 | 2.4:-57570738 | MS.gene67847:CDS |
| CTCAATCATTATGCTTCAGC+TGG | 0.311857 | 2.4:+57567112 | None:intergenic |
| CAGGTTAAGGGCACTGTGTT+TGG | 0.314966 | 2.4:-57569207 | MS.gene67847:CDS |
| CGAATACAAGCGTTGGATTA+CGG | 0.315930 | 2.4:+57567810 | None:intergenic |
| AATAGATTGGCGACTCTTGC+TGG | 0.328161 | 2.4:-57569238 | MS.gene67847:intron |
| CAAAGGCACCATATGGCTTT+AGG | 0.333275 | 2.4:+57568101 | None:intergenic |
| TTTCAAGAGCTTCTGTAAAC+TGG | 0.350843 | 2.4:+57570530 | None:intergenic |
| GGATAAGTCTGGCTTGTTCC+TGG | 0.356772 | 2.4:+57568200 | None:intergenic |
| ATTGGCGACTCTTGCTGGTT+TGG | 0.364607 | 2.4:-57569233 | MS.gene67847:CDS |
| AAAGAGGAATTTGTAATTGT+TGG | 0.366149 | 2.4:-57569063 | MS.gene67847:CDS |
| GGCTGAAGTTGAAGGCCTTA+AGG | 0.383122 | 2.4:-57568686 | MS.gene67847:CDS |
| CTCAGCAGCGACGGGATCTT+AGG | 0.395165 | 2.4:-57567187 | MS.gene67847:CDS |
| GCTGAAGTTGAAGGCCTTAA+GGG | 0.395706 | 2.4:-57568685 | MS.gene67847:CDS |
| TCCACCTCCACAAACTTTAG+AGG | 0.398733 | 2.4:+57568223 | None:intergenic |
| TCCTCTAAAGTTTGTGGAGG+TGG | 0.403941 | 2.4:-57568224 | MS.gene67847:CDS |
| GAAGAAGCAGGCATAGTTCC+TGG | 0.411560 | 2.4:-57569090 | MS.gene67847:CDS |
| TTATGGGTTTGTGTTGTTGT+TGG | 0.413642 | 2.4:+57570697 | None:intergenic |
| AGACTTGCCGCCAGAGGGAC+TGG | 0.417394 | 2.4:-57567152 | MS.gene67847:CDS |
| AGAAGAGATTATTGAGTTTG+AGG | 0.422123 | 2.4:-57568248 | MS.gene67847:CDS |
| TGTAGGTTCCAGCTTCTTTG+TGG | 0.427068 | 2.4:+57567847 | None:intergenic |
| CAGTTGCAATATCTGATATA+CGG | 0.431573 | 2.4:+57568026 | None:intergenic |
| ATCCAATTCCTAGTTGTCCT+TGG | 0.432048 | 2.4:+57568149 | None:intergenic |
| CAGATTATTGATGCAAATAA+AGG | 0.442156 | 2.4:-57568718 | MS.gene67847:CDS |
| CTTGAGTTTAAGAGATATCC+AGG | 0.442490 | 2.4:-57569013 | MS.gene67847:CDS |
| ATCCAAGGACAACTAGGAAT+TGG | 0.443348 | 2.4:-57568151 | MS.gene67847:CDS |
| TGAGGTTCCTCTAAAGTTTG+TGG | 0.448327 | 2.4:-57568230 | MS.gene67847:CDS |
| CAAAATGGACTCCCCTCCTA+TGG | 0.453863 | 2.4:-57570723 | MS.gene67847:CDS |
| GGATGCCGGCTACAGCTTTG+CGG | 0.459825 | 2.4:+57568170 | None:intergenic |
| TCCTAGTTGTCCTTGGATGC+CGG | 0.460240 | 2.4:+57568156 | None:intergenic |
| CTTTAGGCTTTGCACAGTGC+CGG | 0.475744 | 2.4:+57568117 | None:intergenic |
| TTTCTTACAGGCGGAGGAGA+TGG | 0.489001 | 2.4:-57567514 | MS.gene67847:intron |
| CTACAGCTTTGCGGTGGCTA+AGG | 0.492564 | 2.4:+57568179 | None:intergenic |
| TGGCTCGTGCTGATATGCTT+AGG | 0.493754 | 2.4:-57567452 | MS.gene67847:CDS |
| ACCGTTGACATCTGTGAGAA+TGG | 0.495475 | 2.4:+57568655 | None:intergenic |
| AGCCACCGCAAAGCTGTAGC+CGG | 0.495533 | 2.4:-57568175 | MS.gene67847:CDS |
| GACTTACACGGCCTCTCTCC+CGG | 0.497880 | 2.4:+57567873 | None:intergenic |
| TGTTGTTGGTTTCCATAGGA+GGG | 0.499837 | 2.4:+57570711 | None:intergenic |
| AGAATGGAACAAATCCCTTA+AGG | 0.501700 | 2.4:+57568671 | None:intergenic |
| TTTCCCATGCAAGCTCAGCC+TGG | 0.503771 | 2.4:+57568995 | None:intergenic |
| ATGTCGACAAAGGCACCATA+TGG | 0.506023 | 2.4:+57568094 | None:intergenic |
| AACAAGCAAATACCTCTGGC+TGG | 0.506114 | 2.4:+57567427 | None:intergenic |
| AAAGTTTGTGGAGGTGGACC+AGG | 0.506690 | 2.4:-57568218 | MS.gene67847:CDS |
| TGGCATGGCCATGGCGTCCG+TGG | 0.508489 | 2.4:-57570764 | None:intergenic |
| GTTGTTGGTTTCCATAGGAG+GGG | 0.510216 | 2.4:+57570712 | None:intergenic |
| TCAATCATTATGCTTCAGCT+GGG | 0.512179 | 2.4:+57567113 | None:intergenic |
| AAGTCTTTCCACAAAGAAGC+TGG | 0.512449 | 2.4:-57567855 | MS.gene67847:CDS |
| TTGTTGTTGGTTTCCATAGG+AGG | 0.513399 | 2.4:+57570710 | None:intergenic |
| ATATCCAGGCTGAGCTTGCA+TGG | 0.513898 | 2.4:-57568999 | MS.gene67847:CDS |
| GTGTTGTTGTTGGTTTCCAT+AGG | 0.514531 | 2.4:+57570707 | None:intergenic |
| ACAAATTCCTCTTTCACGCC+AGG | 0.517325 | 2.4:+57569072 | None:intergenic |
| CATAGTTCCTGGCGTGAAAG+AGG | 0.517603 | 2.4:-57569079 | MS.gene67847:CDS |
| TGATGATCTTAAGTCATGAC+CGG | 0.527190 | 2.4:-57567892 | MS.gene67847:CDS |
| GTGCAAAGCCTAAAGCCATA+TGG | 0.527346 | 2.4:-57568109 | MS.gene67847:CDS |
| AAAGCTGTAGCCGGCATCCA+AGG | 0.528940 | 2.4:-57568166 | MS.gene67847:CDS |
| AGCAGAAGATGCTGTTGTCA+AGG | 0.532605 | 2.4:-57568956 | MS.gene67847:CDS |
| GAGCGAGATTGGCATGGCCA+TGG | 0.534708 | 2.4:-57570773 | None:intergenic |
| CTTAGGCATGTAGAAGAAGC+AGG | 0.540089 | 2.4:-57569102 | MS.gene67847:CDS |
| TATGGTGCCTTTGTCGACAT+TGG | 0.542087 | 2.4:-57568091 | MS.gene67847:CDS |
| AGGCTGAGCTTGCATGGGAA+AGG | 0.542586 | 2.4:-57568993 | MS.gene67847:CDS |
| TCACTCAGATCCAGTCCCTC+TGG | 0.542917 | 2.4:+57567142 | None:intergenic |
| GCAATGGAACATACAATACC+AGG | 0.544539 | 2.4:+57570661 | None:intergenic |
| AGATGCTGTTGTCAAGGGTA+AGG | 0.545420 | 2.4:-57568950 | MS.gene67847:intron |
| GTCGACATTGGTGGAATCAG+TGG | 0.547276 | 2.4:-57568079 | MS.gene67847:CDS |
| TGAGTCTGAAATTGGAACCA+AGG | 0.547889 | 2.4:-57570497 | MS.gene67847:CDS |
| AACTCAATAATCTCTTCTCC+CGG | 0.548474 | 2.4:+57568253 | None:intergenic |
| ACCTTCTCGAATACAAGCGT+TGG | 0.548772 | 2.4:+57567803 | None:intergenic |
| AACAAAAGCTCCACTAGTAT+CGG | 0.548885 | 2.4:+57569182 | None:intergenic |
| GATTAACTCTCAGCAGCGAC+GGG | 0.550527 | 2.4:-57567195 | MS.gene67847:CDS |
| GGTGCCTTTGTCGACATTGG+TGG | 0.554761 | 2.4:-57568088 | MS.gene67847:CDS |
| ACGTTGTCGTACTGCTCCAA+TGG | 0.554804 | 2.4:-57570575 | MS.gene67847:CDS |
| GCGGTGGCTAAGGATAAGTC+TGG | 0.558220 | 2.4:+57568189 | None:intergenic |
| AAGAAGCTGGAACCTACACC+TGG | 0.561293 | 2.4:-57567842 | MS.gene67847:CDS |
| TTGTTGAGCCACGGACGCCA+TGG | 0.562520 | 2.4:+57570756 | None:intergenic |
| GGTGTGGTGGCTGAAGTTGA+AGG | 0.562756 | 2.4:-57568694 | MS.gene67847:CDS |
| CTACATGCCTAAGTTTGTAG+AGG | 0.566419 | 2.4:+57569112 | None:intergenic |
| AATAGCGCAAGCAGAAGCCA+TGG | 0.569153 | 2.4:-57567472 | MS.gene67847:CDS |
| AAGCATATCAGCACGAGCCA+TGG | 0.569475 | 2.4:+57567455 | None:intergenic |
| GGTCAAAATGAAATTGATGA+TGG | 0.574050 | 2.4:-57569042 | MS.gene67847:CDS |
| GGCTTACTTGCCGCTACGTG+AGG | 0.578744 | 2.4:-57569139 | MS.gene67847:CDS |
| TGACATTACTTCAAAGTCCA+CGG | 0.579638 | 2.4:-57569160 | MS.gene67847:CDS |
| GGATTACGGATCATATCTCC+AGG | 0.580645 | 2.4:+57567824 | None:intergenic |
| GCAGAAGATGCTGTTGTCAA+GGG | 0.582875 | 2.4:-57568955 | MS.gene67847:CDS |
| GTAAACGAAACACCTTCCAT+TGG | 0.585546 | 2.4:+57570559 | None:intergenic |
| GGTTCAGACTTGCCGCCAGA+GGG | 0.588733 | 2.4:-57567157 | MS.gene67847:CDS |
| GGTTCCTCTAAAGTTTGTGG+AGG | 0.589105 | 2.4:-57568227 | MS.gene67847:CDS |
| TGTCGTACTGCTCCAATGGA+AGG | 0.591894 | 2.4:-57570571 | MS.gene67847:CDS |
| CGGATCATATCTCCAGGTGT+AGG | 0.593928 | 2.4:+57567830 | None:intergenic |
| TTAAGTCATGACCGGGAGAG+AGG | 0.596196 | 2.4:-57567884 | MS.gene67847:CDS |
| GCCGGCATCCAAGGACAACT+AGG | 0.598178 | 2.4:-57568157 | MS.gene67847:CDS |
| CAATCATTATGCTTCAGCTG+GGG | 0.598240 | 2.4:+57567114 | None:intergenic |
| ATTGCAACTGTTCTTCAACC+TGG | 0.598301 | 2.4:-57568013 | MS.gene67847:CDS |
| AGGCGAGCCTCTACAAACTT+AGG | 0.599442 | 2.4:-57569119 | MS.gene67847:CDS |
| AATCATTATGCTTCAGCTGG+GGG | 0.600397 | 2.4:+57567115 | None:intergenic |
| GACGGGATCTTAGGACCACT+TGG | 0.601087 | 2.4:-57567178 | MS.gene67847:CDS |
| TATCCAGGCTGAGCTTGCAT+GGG | 0.601092 | 2.4:-57568998 | MS.gene67847:CDS |
| TGCCGGCTACAGCTTTGCGG+TGG | 0.601907 | 2.4:+57568173 | None:intergenic |
| GGATTAACTCTCAGCAGCGA+CGG | 0.603569 | 2.4:-57567196 | MS.gene67847:CDS |
| TCAACCTGGTGATACTCTGA+AGG | 0.607339 | 2.4:-57567999 | MS.gene67847:intron |
| CATAAACAACAAAGACGCCC+TGG | 0.608933 | 2.4:-57570679 | MS.gene67847:CDS |
| TCCATTCTCACAGATGTCAA+CGG | 0.609353 | 2.4:-57568656 | MS.gene67847:intron |
| ATTATTGATGCAAATAAAGG+TGG | 0.619527 | 2.4:-57568715 | MS.gene67847:CDS |
| TGGTTCAGACTTGCCGCCAG+AGG | 0.622339 | 2.4:-57567158 | MS.gene67847:CDS |
| GCTGGTCAGTTGTTGAGCCA+CGG | 0.622880 | 2.4:+57570747 | None:intergenic |
| GGAATTGGATCAGTTGTCAC+CGG | 0.623309 | 2.4:-57568136 | MS.gene67847:CDS |
| ATTCGCGCTTGTGATTGCAA+TGG | 0.626208 | 2.4:+57570645 | None:intergenic |
| GATTCCACCAATGTCGACAA+AGG | 0.632169 | 2.4:+57568084 | None:intergenic |
| TGCAAATAAAGGTGGTGTGG+TGG | 0.633576 | 2.4:-57568707 | MS.gene67847:CDS |
| GTGTTTGGCACCGATACTAG+TGG | 0.637091 | 2.4:-57569192 | MS.gene67847:CDS |
| TTTACCTTCAGAGTATCACC+AGG | 0.639151 | 2.4:+57567995 | None:intergenic |
| TGATTTGACTGACATGAAGA+AGG | 0.640974 | 2.4:+57568056 | None:intergenic |
| ACGTAGCGGCAAGTAAGCCG+TGG | 0.643506 | 2.4:+57569143 | None:intergenic |
| GATGATCTTAAGTCATGACC+GGG | 0.648527 | 2.4:-57567891 | MS.gene67847:CDS |
| TAGAGGCTCGCCTCACGTAG+CGG | 0.651152 | 2.4:+57569129 | None:intergenic |
| TCCAACGCTTGTATTCGAGA+AGG | 0.655139 | 2.4:-57567804 | MS.gene67847:intron |
| TGATGCAAATAAAGGTGGTG+TGG | 0.659116 | 2.4:-57568710 | MS.gene67847:CDS |
| TATGCTTAGGTTCCAGCCAG+AGG | 0.664471 | 2.4:-57567439 | MS.gene67847:intron |
| GGCGGCAAGTCTGAACCAAG+TGG | 0.672418 | 2.4:+57567163 | None:intergenic |
| CTCAGATCCAGTCCCTCTGG+CGG | 0.676022 | 2.4:+57567145 | None:intergenic |
| CAATGGAACATACAATACCA+GGG | 0.706248 | 2.4:+57570662 | None:intergenic |
| TCTTTGTGGAAAGACTTACA+CGG | 0.716184 | 2.4:+57567861 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTTTTTTAATTTATGA+TGG | - | chr2.4:57567709-57567728 | MS.gene67847:intron | 10.0% |
| !!! | TTGTAAATTTTATACATTTA+AGG | + | chr2.4:57568033-57568052 | None:intergenic | 10.0% |
| !!! | TTTTATGTATTTTAACTATT+AGG | - | chr2.4:57568289-57568308 | MS.gene67847:intron | 10.0% |
| !!! | TTTTTATGCTATTTTAATTT+TGG | + | chr2.4:57570555-57570574 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTGTAGAATTTT+TGG | - | chr2.4:57567687-57567706 | MS.gene67847:intron | 10.0% |
| !!! | CTTTGTATTTTATTGAATTT+TGG | - | chr2.4:57567510-57567529 | MS.gene67847:intron | 15.0% |
| !!! | TAATTTATGATGGATAAAAA+GGG | - | chr2.4:57567719-57567738 | MS.gene67847:intron | 15.0% |
| !!! | TTAATTTATGATGGATAAAA+AGG | - | chr2.4:57567718-57567737 | MS.gene67847:intron | 15.0% |
| !!! | TTTAAGATGAATTTTGATTT+GGG | - | chr2.4:57567463-57567482 | MS.gene67847:CDS | 15.0% |
| !!! | TTTGCAATTTTATATTTTCA+AGG | - | chr2.4:57568506-57568525 | MS.gene67847:intron | 15.0% |
| !!! | TTTTAAGATGAATTTTGATT+TGG | - | chr2.4:57567462-57567481 | MS.gene67847:CDS | 15.0% |
| !!! | TTTTGGATTTTTTTAGTTTA+TGG | - | chr2.4:57567527-57567546 | MS.gene67847:intron | 15.0% |
| !! | ATCTCATTCTTTATATGATT+AGG | - | chr2.4:57569965-57569984 | MS.gene67847:intron | 20.0% |
| !! | ATTGTGTATGAACAAAAAAA+TGG | - | chr2.4:57567809-57567828 | MS.gene67847:CDS | 20.0% |
| !! | GAAAATAATCAAAGAAAGTT+AGG | + | chr2.4:57570273-57570292 | None:intergenic | 20.0% |
| !! | GCTTGAAAAATAATCATTAA+AGG | + | chr2.4:57568581-57568600 | None:intergenic | 20.0% |
| !! | GTTAACTTTATTAATGTTTG+TGG | - | chr2.4:57567437-57567456 | MS.gene67847:intron | 20.0% |
| !! | TTGTGTATGAACAAAAAAAT+GGG | - | chr2.4:57567810-57567829 | MS.gene67847:CDS | 20.0% |
| !! | TTTCAATTGAATTGAGTATT+CGG | - | chr2.4:57567878-57567897 | MS.gene67847:CDS | 20.0% |
| !!! | AATTTATGATGGATAAAAAG+GGG | - | chr2.4:57567720-57567739 | MS.gene67847:intron | 20.0% |
| !!! | ACACATTGTTAGTAATTTTA+TGG | + | chr2.4:57568487-57568506 | None:intergenic | 20.0% |
| !!! | ATACATTGCTAACTTTTAAT+CGG | - | chr2.4:57570334-57570353 | MS.gene67847:intron | 20.0% |
| !!! | GATGCAATATATTTTATTTG+TGG | - | chr2.4:57569391-57569410 | MS.gene67847:intron | 20.0% |
| !!! | GTAATTAATCTGAAATAGAT+TGG | - | chr2.4:57568629-57568648 | MS.gene67847:intron | 20.0% |
| !!! | TAAACTTCTAATTTTGCTAA+GGG | + | chr2.4:57569556-57569575 | None:intergenic | 20.0% |
| !!! | TTAAGAGTAAACAATCATTT+TGG | + | chr2.4:57568235-57568254 | None:intergenic | 20.0% |
| !!! | TTAAGATGAATTTTGATTTG+GGG | - | chr2.4:57567464-57567483 | MS.gene67847:CDS | 20.0% |
| !!! | TTTAAGATGAATTTTGATGT+GGG | - | chr2.4:57567634-57567653 | MS.gene67847:intron | 20.0% |
| !!! | TTTTAAGATGAATTTTGATG+TGG | - | chr2.4:57567633-57567652 | MS.gene67847:intron | 20.0% |
| !!! | TTTTTAGTTTATGGTGAAAA+GGG | - | chr2.4:57567536-57567555 | MS.gene67847:intron | 20.0% |
| !!! | TTTTTTAGTTTATGGTGAAA+AGG | - | chr2.4:57567535-57567554 | MS.gene67847:intron | 20.0% |
| ! | AAAGAGGAATTTGTAATTGT+TGG | - | chr2.4:57568817-57568836 | MS.gene67847:intron | 25.0% |
| ! | AACAAAAAAAAAACTTGCCT+TGG | + | chr2.4:57567403-57567422 | None:intergenic | 25.0% |
| ! | ACTAGCAAAAAAGATATTTC+GGG | + | chr2.4:57568391-57568410 | None:intergenic | 25.0% |
| ! | ATATCGATGAATTGTATTAC+AGG | + | chr2.4:57569911-57569930 | None:intergenic | 25.0% |
| ! | ATTATTGATGCAAATAAAGG+TGG | - | chr2.4:57569165-57569184 | MS.gene67847:CDS | 25.0% |
| ! | CAGATTATTGATGCAAATAA+AGG | - | chr2.4:57569162-57569181 | MS.gene67847:CDS | 25.0% |
| ! | CATATGAGTGAAAAAGAAAT+TGG | + | chr2.4:57569128-57569147 | None:intergenic | 25.0% |
| ! | GACTAGCAAAAAAGATATTT+CGG | + | chr2.4:57568392-57568411 | None:intergenic | 25.0% |
| ! | GAGATAGTAAAGTTAATTTC+TGG | - | chr2.4:57567957-57567976 | MS.gene67847:intron | 25.0% |
| ! | TAAACAACATTAAGCTGTAA+CGG | + | chr2.4:57567923-57567942 | None:intergenic | 25.0% |
| ! | TAAAGGCTAAACATTCAATT+GGG | + | chr2.4:57568564-57568583 | None:intergenic | 25.0% |
| ! | TACTCTTAATATCTGACTAA+TGG | - | chr2.4:57568246-57568265 | MS.gene67847:CDS | 25.0% |
| ! | TGAAAGAACTATTCATATTG+AGG | - | chr2.4:57568607-57568626 | MS.gene67847:intron | 25.0% |
| ! | TTAAAGGCTAAACATTCAAT+TGG | + | chr2.4:57568565-57568584 | None:intergenic | 25.0% |
| ! | TTGAATCAAAACTTGTCATT+TGG | - | chr2.4:57569288-57569307 | MS.gene67847:intron | 25.0% |
| !! | AAACTTCTAATTTTGCTAAG+GGG | + | chr2.4:57569555-57569574 | None:intergenic | 25.0% |
| !! | ACATTTTCCTCATAAACATT+AGG | + | chr2.4:57567783-57567802 | None:intergenic | 25.0% |
| !! | CTAAACTTCTAATTTTGCTA+AGG | + | chr2.4:57569557-57569576 | None:intergenic | 25.0% |
| !!! | ATCTTTTTTGCTAGTCATTT+TGG | - | chr2.4:57568396-57568415 | MS.gene67847:intron | 25.0% |
| !!! | GTGTCTTTTTTTAGTCATTT+TGG | - | chr2.4:57568069-57568088 | MS.gene67847:CDS | 25.0% |
| !!! | TATGATTTTGAGTCTGAAAT+TGG | - | chr2.4:57567375-57567394 | MS.gene67847:intron | 25.0% |
| !!! | TTAAGATGAATTTTGATGTG+GGG | - | chr2.4:57567635-57567654 | MS.gene67847:intron | 25.0% |
| !!! | TTGATTTTTTTTCTTACAGG+CGG | - | chr2.4:57570357-57570376 | MS.gene67847:intron | 25.0% |
| AATTAACAAGCAAATACCTC+TGG | + | chr2.4:57570460-57570479 | None:intergenic | 30.0% | |
| ACGTTCATAAATGTCAAAGT+AGG | + | chr2.4:57569261-57569280 | None:intergenic | 30.0% | |
| AGAAGAGATTATTGAGTTTG+AGG | - | chr2.4:57569632-57569651 | MS.gene67847:intron | 30.0% | |
| AGTGAAAAAGAAATTGGTAG+GGG | + | chr2.4:57569122-57569141 | None:intergenic | 30.0% | |
| CACACATTTAGAGAACAAAA+TGG | + | chr2.4:57568322-57568341 | None:intergenic | 30.0% | |
| CAGTTGCAATATCTGATATA+CGG | + | chr2.4:57569857-57569876 | None:intergenic | 30.0% | |
| CGATATTTGAATAGAGTTAC+AGG | - | chr2.4:57569925-57569944 | MS.gene67847:intron | 30.0% | |
| GAATATCATATCAGTAGTCA+TGG | - | chr2.4:57570159-57570178 | MS.gene67847:intron | 30.0% | |
| GACAATGTCTTACATATTGA+GGG | - | chr2.4:57568537-57568556 | MS.gene67847:intron | 30.0% | |
| GAGTGAAAAAGAAATTGGTA+GGG | + | chr2.4:57569123-57569142 | None:intergenic | 30.0% | |
| GGAGAAAATCAACTCATAAA+TGG | + | chr2.4:57569101-57569120 | None:intergenic | 30.0% | |
| GGTCAAAATGAAATTGATGA+TGG | - | chr2.4:57568838-57568857 | MS.gene67847:intron | 30.0% | |
| TACGAAGAAAATAGGCAAAA+GGG | + | chr2.4:57569600-57569619 | None:intergenic | 30.0% | |
| TACTAGAAACTAATCCAAAC+AGG | + | chr2.4:57567848-57567867 | None:intergenic | 30.0% | |
| TCTTAATATCTGACTAATGG+TGG | - | chr2.4:57568249-57568268 | MS.gene67847:CDS | 30.0% | |
| TGACAATGTCTTACATATTG+AGG | - | chr2.4:57568536-57568555 | MS.gene67847:intron | 30.0% | |
| TGAGTGAAAAAGAAATTGGT+AGG | + | chr2.4:57569124-57569143 | None:intergenic | 30.0% | |
| TGGATTACCTAATGTTTATG+AGG | - | chr2.4:57567773-57567792 | MS.gene67847:intron | 30.0% | |
| TTAAAATTCAGCAGTAGAAG+TGG | + | chr2.4:57570581-57570600 | None:intergenic | 30.0% | |
| ! | AATAACAAAGCAAAGCACTT+TGG | + | chr2.4:57570239-57570258 | None:intergenic | 30.0% |
| ! | ACTCATATGTGTAATTTGTG+TGG | - | chr2.4:57569139-57569158 | MS.gene67847:CDS | 30.0% |
| ! | ACTCTGGAAAACAAACAATA+AGG | + | chr2.4:57570664-57570683 | None:intergenic | 30.0% |
| ! | ATTTTCTTCGTAGAAAACAC+CGG | - | chr2.4:57569608-57569627 | MS.gene67847:intron | 30.0% |
| ! | CTCTGGAAAACAAACAATAA+GGG | + | chr2.4:57570663-57570682 | None:intergenic | 30.0% |
| ! | GTGTTTTCTACGAAGAAAAT+AGG | + | chr2.4:57569608-57569627 | None:intergenic | 30.0% |
| ! | TGTCATTTGGCAAGTAAAAA+AGG | - | chr2.4:57569301-57569320 | MS.gene67847:intron | 30.0% |
| !! | ATTTGCAATCTTTAGAGCTT+AGG | + | chr2.4:57569360-57569379 | None:intergenic | 30.0% |
| !! | TGGATTAGTTTCTAGTACAT+TGG | - | chr2.4:57567851-57567870 | MS.gene67847:CDS | 30.0% |
| !! | TGTAGAATGACATGTTTTTG+AGG | - | chr2.4:57567746-57567765 | MS.gene67847:intron | 30.0% |
| !! | TTATTGTTTGTTTTCCAGAG+TGG | - | chr2.4:57570663-57570682 | MS.gene67847:CDS | 30.0% |
| !!! | AGTCATTTTGGTTCTTGAAT+GGG | - | chr2.4:57568081-57568100 | MS.gene67847:CDS | 30.0% |
| !!! | CGGTTGATTTTTTTTCTTAC+AGG | - | chr2.4:57570354-57570373 | MS.gene67847:intron | 30.0% |
| !!! | TAGTCATTTTGGTTCTTGAA+TGG | - | chr2.4:57568080-57568099 | MS.gene67847:CDS | 30.0% |
| AACAAAAGCTCCACTAGTAT+CGG | + | chr2.4:57568701-57568720 | None:intergenic | 35.0% | |
| AACTCAATAATCTCTTCTCC+CGG | + | chr2.4:57569630-57569649 | None:intergenic | 35.0% | |
| ACAATGGCTATTGAGAGAAA+TGG | - | chr2.4:57569325-57569344 | MS.gene67847:intron | 35.0% | |
| AGAAACTAATCCAAACAGGT+TGG | + | chr2.4:57567844-57567863 | None:intergenic | 35.0% | |
| AGAATGGAACAAATCCCTTA+AGG | + | chr2.4:57569212-57569231 | None:intergenic | 35.0% | |
| AGTTCCATCATAGATAGCAT+AGG | + | chr2.4:57569441-57569460 | None:intergenic | 35.0% | |
| CAATGGAACATACAATACCA+GGG | + | chr2.4:57567221-57567240 | None:intergenic | 35.0% | |
| CTACGAAGAAAATAGGCAAA+AGG | + | chr2.4:57569601-57569620 | None:intergenic | 35.0% | |
| CTTGAATGTGTCTTCTGTTA+GGG | - | chr2.4:57568122-57568141 | MS.gene67847:CDS | 35.0% | |
| CTTGAGTTTAAGAGATATCC+AGG | - | chr2.4:57568867-57568886 | MS.gene67847:intron | 35.0% | |
| TCTTTGTGGAAAGACTTACA+CGG | + | chr2.4:57570022-57570041 | None:intergenic | 35.0% | |
| TGACATTACTTCAAAGTCCA+CGG | - | chr2.4:57568720-57568739 | MS.gene67847:intron | 35.0% | |
| TGATGATCTTAAGTCATGAC+CGG | - | chr2.4:57569988-57570007 | MS.gene67847:intron | 35.0% | |
| TGATTTGACTGACATGAAGA+AGG | + | chr2.4:57569827-57569846 | None:intergenic | 35.0% | |
| TTGAATGTGTCTTCTGTTAG+GGG | - | chr2.4:57568123-57568142 | MS.gene67847:CDS | 35.0% | |
| TTTCAAGAGCTTCTGTAAAC+TGG | + | chr2.4:57567353-57567372 | None:intergenic | 35.0% | |
| ! | GGCAAGTAAAAAAGGTACAA+TGG | - | chr2.4:57569309-57569328 | MS.gene67847:intron | 35.0% |
| ! | TTATGGGTTTGTGTTGTTGT+TGG | + | chr2.4:57567186-57567205 | None:intergenic | 35.0% |
| ! | TTTTCTTCGTAGAAAACACC+GGG | - | chr2.4:57569609-57569628 | MS.gene67847:intron | 35.0% |
| !! | GCTATTGAAAAGTGTTGAAG+TGG | + | chr2.4:57570295-57570314 | None:intergenic | 35.0% |
| !!! | ATTTTTTTTCTTACAGGCGG+AGG | - | chr2.4:57570360-57570379 | MS.gene67847:intron | 35.0% |
| !!! | TGACATGTTTTTGAGGTTTG+TGG | - | chr2.4:57567753-57567772 | MS.gene67847:intron | 35.0% |
| AACAACTGACCAGCACAAAA+TGG | - | chr2.4:57567142-57567161 | MS.gene67847:CDS | 40.0% | |
| AAGTCTTTCCACAAAGAAGC+TGG | - | chr2.4:57570025-57570044 | MS.gene67847:intron | 40.0% | |
| ATCCAAGGACAACTAGGAAT+TGG | - | chr2.4:57569729-57569748 | MS.gene67847:intron | 40.0% | |
| ATCCAATTCCTAGTTGTCCT+TGG | + | chr2.4:57569734-57569753 | None:intergenic | 40.0% | |
| ATTGCAACTGTTCTTCAACC+TGG | - | chr2.4:57569867-57569886 | MS.gene67847:intron | 40.0% | |
| CACACATCTAACGACCAAAA+TGG | + | chr2.4:57567992-57568011 | None:intergenic | 40.0% | |
| CCATCATAGATAGCATAGGA+AGG | + | chr2.4:57569437-57569456 | None:intergenic | 40.0% | |
| CCTTCCTATGCTATCTATGA+TGG | - | chr2.4:57569434-57569453 | MS.gene67847:intron | 40.0% | |
| CTACATGCCTAAGTTTGTAG+AGG | + | chr2.4:57568771-57568790 | None:intergenic | 40.0% | |
| GATGATCTTAAGTCATGACC+GGG | - | chr2.4:57569989-57570008 | MS.gene67847:intron | 40.0% | |
| GCAATGGAACATACAATACC+AGG | + | chr2.4:57567222-57567241 | None:intergenic | 40.0% | |
| GCTTGAATGTGTCTTCTGTT+AGG | - | chr2.4:57568121-57568140 | MS.gene67847:CDS | 40.0% | |
| GTAAACGAAACACCTTCCAT+TGG | + | chr2.4:57567324-57567343 | None:intergenic | 40.0% | |
| TCCATTCTCACAGATGTCAA+CGG | - | chr2.4:57569224-57569243 | MS.gene67847:CDS | 40.0% | |
| TGATGCAAATAAAGGTGGTG+TGG | - | chr2.4:57569170-57569189 | MS.gene67847:CDS | 40.0% | |
| ! | AAAGCACTTTGGCTTCTTGT+AGG | + | chr2.4:57570228-57570247 | None:intergenic | 40.0% |
| ! | GAAGCAGAAAAAGCATGAAG+TGG | + | chr2.4:57570192-57570211 | None:intergenic | 40.0% |
| ! | GTTACTTTAGTCCTCGAATG+TGG | - | chr2.4:57568441-57568460 | MS.gene67847:intron | 40.0% |
| ! | TGAGTCTGAAATTGGAACCA+AGG | - | chr2.4:57567383-57567402 | MS.gene67847:intron | 40.0% |
| ! | TTTACCTTCAGAGTATCACC+AGG | + | chr2.4:57569888-57569907 | None:intergenic | 40.0% |
| ! | TTTTGGTCTCCACATGAATG+AGG | + | chr2.4:57568218-57568237 | None:intergenic | 40.0% |
| !! | AATCCAAACAGGTTGGTTCA+AGG | + | chr2.4:57567837-57567856 | None:intergenic | 40.0% |
| !! | AGGGCGTCTTTGTTGTTTAT+GGG | + | chr2.4:57567202-57567221 | None:intergenic | 40.0% |
| !! | CGAATACAAGCGTTGGATTA+CGG | + | chr2.4:57570073-57570092 | None:intergenic | 40.0% |
| !! | CTGGTTTGGTTTCAGGTTAA+GGG | - | chr2.4:57568661-57568680 | MS.gene67847:CDS | 40.0% |
| !! | GTGTTGTTGTTGGTTTCCAT+AGG | + | chr2.4:57567176-57567195 | None:intergenic | 40.0% |
| !! | TGAGGTTCCTCTAAAGTTTG+TGG | - | chr2.4:57569650-57569669 | MS.gene67847:intron | 40.0% |
| !! | TGTTGTTGGTTTCCATAGGA+GGG | + | chr2.4:57567172-57567191 | None:intergenic | 40.0% |
| !! | TTGTTGTTGGTTTCCATAGG+AGG | + | chr2.4:57567173-57567192 | None:intergenic | 40.0% |
| !!! | GGGAAAGAGTTTTGAGTTGT+TGG | + | chr2.4:57569580-57569599 | None:intergenic | 40.0% |
| AACAAGCAAATACCTCTGGC+TGG | + | chr2.4:57570456-57570475 | None:intergenic | 45.0% | |
| AATAGATTGGCGACTCTTGC+TGG | - | chr2.4:57568642-57568661 | MS.gene67847:intron | 45.0% | |
| ACAAATTCCTCTTTCACGCC+AGG | + | chr2.4:57568811-57568830 | None:intergenic | 45.0% | |
| ACCAACGAAATCCACATTCG+AGG | + | chr2.4:57568455-57568474 | None:intergenic | 45.0% | |
| ACCGTTGACATCTGTGAGAA+TGG | + | chr2.4:57569228-57569247 | None:intergenic | 45.0% | |
| ACCTTCTCGAATACAAGCGT+TGG | + | chr2.4:57570080-57570099 | None:intergenic | 45.0% | |
| AGATGCTGTTGTCAAGGGTA+AGG | - | chr2.4:57568930-57568949 | MS.gene67847:intron | 45.0% | |
| AGCAGAAGATGCTGTTGTCA+AGG | - | chr2.4:57568924-57568943 | MS.gene67847:intron | 45.0% | |
| ATTCGCGCTTGTGATTGCAA+TGG | + | chr2.4:57567238-57567257 | None:intergenic | 45.0% | |
| CATAAACAACAAAGACGCCC+TGG | - | chr2.4:57567201-57567220 | MS.gene67847:CDS | 45.0% | |
| CTTAGGCATGTAGAAGAAGC+AGG | - | chr2.4:57568778-57568797 | MS.gene67847:intron | 45.0% | |
| GATTCCACCAATGTCGACAA+AGG | + | chr2.4:57569799-57569818 | None:intergenic | 45.0% | |
| GCAGAAGATGCTGTTGTCAA+GGG | - | chr2.4:57568925-57568944 | MS.gene67847:intron | 45.0% | |
| GCTGAAGTTGAAGGCCTTAA+GGG | - | chr2.4:57569195-57569214 | MS.gene67847:CDS | 45.0% | |
| GGAATTGGATCAGTTGTCAC+CGG | - | chr2.4:57569744-57569763 | MS.gene67847:intron | 45.0% | |
| GGATTACGGATCATATCTCC+AGG | + | chr2.4:57570059-57570078 | None:intergenic | 45.0% | |
| GTGCAAAGCCTAAAGCCATA+TGG | - | chr2.4:57569771-57569790 | MS.gene67847:intron | 45.0% | |
| GTGTCTTCTGTTAGGGGATT+TGG | - | chr2.4:57568129-57568148 | MS.gene67847:CDS | 45.0% | |
| TATGGTGCCTTTGTCGACAT+TGG | - | chr2.4:57569789-57569808 | MS.gene67847:intron | 45.0% | |
| TCAACCTGGTGATACTCTGA+AGG | - | chr2.4:57569881-57569900 | MS.gene67847:intron | 45.0% | |
| TCCAACGCTTGTATTCGAGA+AGG | - | chr2.4:57570076-57570095 | MS.gene67847:intron | 45.0% | |
| TCCACCTCCACAAACTTTAG+AGG | + | chr2.4:57569660-57569679 | None:intergenic | 45.0% | |
| TCCTCGAATGTGGATTTCGT+TGG | - | chr2.4:57568451-57568470 | MS.gene67847:intron | 45.0% | |
| TGAAACTGAAGCAGCAGCAA+CGG | - | chr2.4:57570507-57570526 | MS.gene67847:CDS | 45.0% | |
| TGCAAATAAAGGTGGTGTGG+TGG | - | chr2.4:57569173-57569192 | MS.gene67847:CDS | 45.0% | |
| TGCTGAGAGTTAATCCACTC+TGG | + | chr2.4:57570680-57570699 | None:intergenic | 45.0% | |
| TGTAGGTTCCAGCTTCTTTG+TGG | + | chr2.4:57570036-57570055 | None:intergenic | 45.0% | |
| !! | ACTCTTGCTGGTTTGGTTTC+AGG | - | chr2.4:57568654-57568673 | MS.gene67847:intron | 45.0% |
| !! | ATGTCGACAAAGGCACCATA+TGG | + | chr2.4:57569789-57569808 | None:intergenic | 45.0% |
| !! | CAAAGGCACCATATGGCTTT+AGG | + | chr2.4:57569782-57569801 | None:intergenic | 45.0% |
| !! | CAGGGCGTCTTTGTTGTTTA+TGG | + | chr2.4:57567203-57567222 | None:intergenic | 45.0% |
| !! | GCTGGTTTGGTTTCAGGTTA+AGG | - | chr2.4:57568660-57568679 | MS.gene67847:CDS | 45.0% |
| !! | GGTTCCTCTAAAGTTTGTGG+AGG | - | chr2.4:57569653-57569672 | MS.gene67847:intron | 45.0% |
| !! | GTTGTTGGTTTCCATAGGAG+GGG | + | chr2.4:57567171-57567190 | None:intergenic | 45.0% |
| !! | TCCTCTAAAGTTTGTGGAGG+TGG | - | chr2.4:57569656-57569675 | MS.gene67847:intron | 45.0% |
| !! | TCTGGAGTGAACAGCCATTT+TGG | - | chr2.4:57567975-57567994 | MS.gene67847:intron | 45.0% |
| !!! | TTTTAAGTAATTTTATTTTA+TGG | + | chr2.4:57568156-57568175 | None:intergenic | 5.0% |
| AAAGTTTGTGGAGGTGGACC+AGG | - | chr2.4:57569662-57569681 | MS.gene67847:intron | 50.0% | |
| AAGAAGCTGGAACCTACACC+TGG | - | chr2.4:57570038-57570057 | MS.gene67847:intron | 50.0% | |
| AAGCAGCAGCAACGGATCAA+AGG | - | chr2.4:57570515-57570534 | MS.gene67847:CDS | 50.0% | |
| AAGCATATCAGCACGAGCCA+TGG | + | chr2.4:57570428-57570447 | None:intergenic | 50.0% | |
| AATAGCGCAAGCAGAAGCCA+TGG | - | chr2.4:57570408-57570427 | MS.gene67847:intron | 50.0% | |
| ACGTTGTCGTACTGCTCCAA+TGG | - | chr2.4:57567305-57567324 | MS.gene67847:intron | 50.0% | |
| AGGCGAGCCTCTACAAACTT+AGG | - | chr2.4:57568761-57568780 | MS.gene67847:intron | 50.0% | |
| ATATCCAGGCTGAGCTTGCA+TGG | - | chr2.4:57568881-57568900 | MS.gene67847:intron | 50.0% | |
| CATAGTTCCTGGCGTGAAAG+AGG | - | chr2.4:57568801-57568820 | MS.gene67847:intron | 50.0% | |
| CGGATCATATCTCCAGGTGT+AGG | + | chr2.4:57570053-57570072 | None:intergenic | 50.0% | |
| CTTTAGGCTTTGCACAGTGC+CGG | + | chr2.4:57569766-57569785 | None:intergenic | 50.0% | |
| GAAGAAGCAGGCATAGTTCC+TGG | - | chr2.4:57568790-57568809 | MS.gene67847:intron | 50.0% | |
| GATTAACTCTCAGCAGCGAC+GGG | - | chr2.4:57570685-57570704 | MS.gene67847:CDS | 50.0% | |
| GGACCTTGAACCAACCTGTT+TGG | - | chr2.4:57567831-57567850 | MS.gene67847:CDS | 50.0% | |
| GGATTAACTCTCAGCAGCGA+CGG | - | chr2.4:57570684-57570703 | MS.gene67847:CDS | 50.0% | |
| GGCTGAAGTTGAAGGCCTTA+AGG | - | chr2.4:57569194-57569213 | MS.gene67847:CDS | 50.0% | |
| GTCGACATTGGTGGAATCAG+TGG | - | chr2.4:57569801-57569820 | MS.gene67847:intron | 50.0% | |
| TATCCAGGCTGAGCTTGCAT+GGG | - | chr2.4:57568882-57568901 | MS.gene67847:intron | 50.0% | |
| TATGCTTAGGTTCCAGCCAG+AGG | - | chr2.4:57570441-57570460 | MS.gene67847:intron | 50.0% | |
| TCCTAGTTGTCCTTGGATGC+CGG | + | chr2.4:57569727-57569746 | None:intergenic | 50.0% | |
| TGTCGTACTGCTCCAATGGA+AGG | - | chr2.4:57567309-57567328 | MS.gene67847:intron | 50.0% | |
| TTAAGTCATGACCGGGAGAG+AGG | - | chr2.4:57569996-57570015 | MS.gene67847:intron | 50.0% | |
| TTTCTTACAGGCGGAGGAGA+TGG | - | chr2.4:57570366-57570385 | MS.gene67847:intron | 50.0% | |
| ! | ATTGGCGACTCTTGCTGGTT+TGG | - | chr2.4:57568647-57568666 | MS.gene67847:intron | 50.0% |
| ! | CAAAATGGACTCCCCTCCTA+TGG | - | chr2.4:57567157-57567176 | MS.gene67847:CDS | 50.0% |
| ! | TGGCTCGTGCTGATATGCTT+AGG | - | chr2.4:57570428-57570447 | MS.gene67847:intron | 50.0% |
| !! | CAGGTTAAGGGCACTGTGTT+TGG | - | chr2.4:57568673-57568692 | MS.gene67847:CDS | 50.0% |
| !! | GGATAAGTCTGGCTTGTTCC+TGG | + | chr2.4:57569683-57569702 | None:intergenic | 50.0% |
| !! | GTGTTTGGCACCGATACTAG+TGG | - | chr2.4:57568688-57568707 | MS.gene67847:CDS | 50.0% |
| AAAGCTGTAGCCGGCATCCA+AGG | - | chr2.4:57569714-57569733 | MS.gene67847:intron | 55.0% | |
| AGGCTGAGCTTGCATGGGAA+AGG | - | chr2.4:57568887-57568906 | MS.gene67847:intron | 55.0% | |
| CTACAGCTTTGCGGTGGCTA+AGG | + | chr2.4:57569704-57569723 | None:intergenic | 55.0% | |
| GACGGGATCTTAGGACCACT+TGG | - | chr2.4:57570702-57570721 | MS.gene67847:CDS | 55.0% | |
| GCGGTGGCTAAGGATAAGTC+TGG | + | chr2.4:57569694-57569713 | None:intergenic | 55.0% | |
| GCTGGTCAGTTGTTGAGCCA+CGG | + | chr2.4:57567136-57567155 | None:intergenic | 55.0% | |
| GGTGCCTTTGTCGACATTGG+TGG | - | chr2.4:57569792-57569811 | MS.gene67847:intron | 55.0% | |
| GGTGTGGTGGCTGAAGTTGA+AGG | - | chr2.4:57569186-57569205 | MS.gene67847:CDS | 55.0% | |
| TCACTCAGATCCAGTCCCTC+TGG | + | chr2.4:57570741-57570760 | None:intergenic | 55.0% | |
| TTTCCCATGCAAGCTCAGCC+TGG | + | chr2.4:57568888-57568907 | None:intergenic | 55.0% | |
| ! | GAGGGGAGTCCATTTTGTGC+TGG | + | chr2.4:57567154-57567173 | None:intergenic | 55.0% |
| !! | GTGAGAGCGCCTCATTCATG+TGG | - | chr2.4:57568206-57568225 | MS.gene67847:CDS | 55.0% |
| ACGTAGCGGCAAGTAAGCCG+TGG | + | chr2.4:57568740-57568759 | None:intergenic | 60.0% | |
| AGCCACCGCAAAGCTGTAGC+CGG | - | chr2.4:57569705-57569724 | MS.gene67847:intron | 60.0% | |
| CTCAGATCCAGTCCCTCTGG+CGG | + | chr2.4:57570738-57570757 | None:intergenic | 60.0% | |
| CTCAGCAGCGACGGGATCTT+AGG | - | chr2.4:57570693-57570712 | MS.gene67847:CDS | 60.0% | |
| GACTTACACGGCCTCTCTCC+CGG | + | chr2.4:57570010-57570029 | None:intergenic | 60.0% | |
| GCCGGCATCCAAGGACAACT+AGG | - | chr2.4:57569723-57569742 | MS.gene67847:intron | 60.0% | |
| GGCGGCAAGTCTGAACCAAG+TGG | + | chr2.4:57570720-57570739 | None:intergenic | 60.0% | |
| GGCTTACTTGCCGCTACGTG+AGG | - | chr2.4:57568741-57568760 | MS.gene67847:intron | 60.0% | |
| GGTTCAGACTTGCCGCCAGA+GGG | - | chr2.4:57570723-57570742 | MS.gene67847:CDS | 60.0% | |
| TAGAGGCTCGCCTCACGTAG+CGG | + | chr2.4:57568754-57568773 | None:intergenic | 60.0% | |
| TGGTTCAGACTTGCCGCCAG+AGG | - | chr2.4:57570722-57570741 | MS.gene67847:CDS | 60.0% | |
| TTGTTGAGCCACGGACGCCA+TGG | + | chr2.4:57567127-57567146 | None:intergenic | 60.0% | |
| ! | GGATGCCGGCTACAGCTTTG+CGG | + | chr2.4:57569713-57569732 | None:intergenic | 60.0% |
| AGACTTGCCGCCAGAGGGAC+TGG | - | chr2.4:57570728-57570747 | MS.gene67847:CDS | 65.0% | |
| ! | TGCCGGCTACAGCTTTGCGG+TGG | + | chr2.4:57569710-57569729 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 57567120 | 57570782 | 57567120 | ID=MS.gene67847 |
| chr2.4 | mRNA | 57567120 | 57570782 | 57567120 | ID=MS.gene67847.t1;Parent=MS.gene67847 |
| chr2.4 | exon | 57570494 | 57570782 | 57570494 | ID=MS.gene67847.t1.exon1;Parent=MS.gene67847.t1 |
| chr2.4 | CDS | 57570494 | 57570782 | 57570494 | ID=cds.MS.gene67847.t1;Parent=MS.gene67847.t1 |
| chr2.4 | exon | 57568951 | 57569255 | 57568951 | ID=MS.gene67847.t1.exon2;Parent=MS.gene67847.t1 |
| chr2.4 | CDS | 57568951 | 57569255 | 57568951 | ID=cds.MS.gene67847.t1;Parent=MS.gene67847.t1 |
| chr2.4 | exon | 57568657 | 57568737 | 57568657 | ID=MS.gene67847.t1.exon3;Parent=MS.gene67847.t1 |
| chr2.4 | CDS | 57568657 | 57568737 | 57568657 | ID=cds.MS.gene67847.t1;Parent=MS.gene67847.t1 |
| chr2.4 | exon | 57568000 | 57568281 | 57568000 | ID=MS.gene67847.t1.exon4;Parent=MS.gene67847.t1 |
| chr2.4 | CDS | 57568000 | 57568281 | 57568000 | ID=cds.MS.gene67847.t1;Parent=MS.gene67847.t1 |
| chr2.4 | exon | 57567805 | 57567915 | 57567805 | ID=MS.gene67847.t1.exon5;Parent=MS.gene67847.t1 |
| chr2.4 | CDS | 57567805 | 57567915 | 57567805 | ID=cds.MS.gene67847.t1;Parent=MS.gene67847.t1 |
| chr2.4 | exon | 57567440 | 57567526 | 57567440 | ID=MS.gene67847.t1.exon6;Parent=MS.gene67847.t1 |
| chr2.4 | CDS | 57567440 | 57567526 | 57567440 | ID=cds.MS.gene67847.t1;Parent=MS.gene67847.t1 |
| chr2.4 | exon | 57567120 | 57567221 | 57567120 | ID=MS.gene67847.t1.exon7;Parent=MS.gene67847.t1 |
| chr2.4 | CDS | 57567120 | 57567221 | 57567120 | ID=cds.MS.gene67847.t1;Parent=MS.gene67847.t1 |
| Gene Sequence |
| Protein sequence |
