Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68923.t1 | XP_013451581.1 | 95 | 382 | 15 | 1 | 16 | 393 | 16 | 397 | 3.50E-178 | 634.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68923.t1 | Q9SQQ9 | 51.5 | 390 | 140 | 9 | 27 | 392 | 30 | 394 | 1.4e-66 | 255.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68923.t1 | A0A072U768 | 95.0 | 382 | 15 | 1 | 16 | 393 | 16 | 397 | 2.5e-178 | 634.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene68923.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049149 | MS.gene68923 | 0.841605 | 4.29E-58 | -1.69E-46 |
MS.gene049150 | MS.gene68923 | 0.850233 | 1.94E-60 | -1.69E-46 |
MS.gene049151 | MS.gene68923 | 0.847197 | 1.35E-59 | -1.69E-46 |
MS.gene049153 | MS.gene68923 | 0.845755 | 3.33E-59 | -1.69E-46 |
MS.gene049260 | MS.gene68923 | 0.835897 | 1.28E-56 | -1.69E-46 |
MS.gene050226 | MS.gene68923 | 0.802744 | 4.85E-49 | -1.69E-46 |
MS.gene050227 | MS.gene68923 | 0.809599 | 1.75E-50 | -1.69E-46 |
MS.gene050228 | MS.gene68923 | 0.809515 | 1.82E-50 | -1.69E-46 |
MS.gene050605 | MS.gene68923 | 0.809301 | 2.02E-50 | -1.69E-46 |
MS.gene050642 | MS.gene68923 | 0.814498 | 1.49E-51 | -1.69E-46 |
MS.gene050680 | MS.gene68923 | 0.831612 | 1.51E-55 | -1.69E-46 |
MS.gene050900 | MS.gene68923 | 0.801657 | 8.12E-49 | -1.69E-46 |
MS.gene051344 | MS.gene68923 | 0.807806 | 4.22E-50 | -1.69E-46 |
MS.gene051860 | MS.gene68923 | 0.831157 | 1.96E-55 | -1.69E-46 |
MS.gene051983 | MS.gene68923 | 0.830569 | 2.73E-55 | -1.69E-46 |
MS.gene052426 | MS.gene68923 | 0.815857 | 7.46E-52 | -1.69E-46 |
MS.gene053008 | MS.gene68923 | 0.801874 | 7.33E-49 | -1.69E-46 |
MS.gene053166 | MS.gene68923 | 0.804941 | 1.70E-49 | -1.69E-46 |
MS.gene053184 | MS.gene68923 | 0.824689 | 7.05E-54 | -1.69E-46 |
MS.gene053494 | MS.gene68923 | 0.818928 | 1.52E-52 | -1.69E-46 |
MS.gene053836 | MS.gene68923 | 0.807117 | 5.91E-50 | -1.69E-46 |
MS.gene054184 | MS.gene68923 | 0.818054 | 2.39E-52 | -1.69E-46 |
MS.gene054185 | MS.gene68923 | 0.822067 | 2.89E-53 | -1.69E-46 |
MS.gene054433 | MS.gene68923 | 0.816835 | 4.51E-52 | -1.69E-46 |
MS.gene054542 | MS.gene68923 | 0.826283 | 2.95E-54 | -1.69E-46 |
MS.gene054559 | MS.gene68923 | 0.8264 | 2.77E-54 | -1.69E-46 |
MS.gene054713 | MS.gene68923 | 0.803335 | 3.66E-49 | -1.69E-46 |
MS.gene05510 | MS.gene68923 | 0.829921 | 3.93E-55 | -1.69E-46 |
MS.gene055356 | MS.gene68923 | 0.83299 | 6.89E-56 | -1.69E-46 |
MS.gene055358 | MS.gene68923 | 0.847798 | 9.20E-60 | -1.69E-46 |
MS.gene055701 | MS.gene68923 | 0.823799 | 1.14E-53 | -1.69E-46 |
MS.gene056979 | MS.gene68923 | 0.822376 | 2.45E-53 | -1.69E-46 |
MS.gene057394 | MS.gene68923 | 0.840964 | 6.33E-58 | -1.69E-46 |
MS.gene057395 | MS.gene68923 | 0.830724 | 2.50E-55 | -1.69E-46 |
MS.gene057469 | MS.gene68923 | 0.803455 | 3.46E-49 | -1.69E-46 |
MS.gene057690 | MS.gene68923 | 0.802917 | 4.47E-49 | -1.69E-46 |
MS.gene058142 | MS.gene68923 | 0.806825 | 6.82E-50 | -1.69E-46 |
MS.gene058146 | MS.gene68923 | 0.809694 | 1.67E-50 | -1.69E-46 |
MS.gene059128 | MS.gene68923 | 0.843081 | 1.74E-58 | -1.69E-46 |
MS.gene059421 | MS.gene68923 | 0.8113 | 7.50E-51 | -1.69E-46 |
MS.gene059609 | MS.gene68923 | 0.838948 | 2.12E-57 | -1.69E-46 |
MS.gene059789 | MS.gene68923 | 0.810009 | 1.43E-50 | -1.69E-46 |
MS.gene05984 | MS.gene68923 | 0.804013 | 2.65E-49 | -1.69E-46 |
MS.gene060322 | MS.gene68923 | 0.809969 | 1.45E-50 | -1.69E-46 |
MS.gene060683 | MS.gene68923 | 0.804489 | 2.11E-49 | -1.69E-46 |
MS.gene060803 | MS.gene68923 | 0.80089 | 1.17E-48 | -1.69E-46 |
MS.gene060942 | MS.gene68923 | 0.802061 | 6.71E-49 | -1.69E-46 |
MS.gene061114 | MS.gene68923 | -0.830903 | 2.26E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68923.t1 | MTR_6g032990 | 94.962 | 397 | 16 | 1 | 1 | 393 | 1 | 397 | 0.0 | 732 |
MS.gene68923.t1 | MTR_2g086450 | 49.438 | 445 | 116 | 15 | 1 | 392 | 1 | 389 | 1.38e-114 | 340 |
MS.gene68923.t1 | MTR_5g041350 | 53.846 | 195 | 82 | 3 | 35 | 225 | 8 | 198 | 7.24e-61 | 200 |
MS.gene68923.t1 | MTR_4g081710 | 52.821 | 195 | 85 | 3 | 35 | 225 | 10 | 201 | 1.28e-58 | 194 |
MS.gene68923.t1 | MTR_6g444980 | 53.889 | 180 | 68 | 2 | 15 | 194 | 14 | 178 | 3.93e-54 | 183 |
MS.gene68923.t1 | MTR_5g027440 | 50.000 | 196 | 82 | 3 | 24 | 212 | 7 | 193 | 4.73e-52 | 175 |
MS.gene68923.t1 | MTR_6g444980 | 54.601 | 163 | 59 | 2 | 15 | 177 | 14 | 161 | 4.20e-48 | 167 |
MS.gene68923.t1 | MTR_7g088070 | 44.444 | 225 | 109 | 7 | 9 | 228 | 15 | 228 | 5.42e-47 | 162 |
MS.gene68923.t1 | MTR_7g088070 | 43.556 | 225 | 107 | 7 | 9 | 228 | 15 | 224 | 1.46e-46 | 160 |
MS.gene68923.t1 | MTR_7g098250 | 49.727 | 183 | 65 | 5 | 4 | 182 | 231 | 390 | 4.62e-44 | 159 |
MS.gene68923.t1 | MTR_2g027800 | 45.506 | 178 | 93 | 4 | 23 | 198 | 19 | 194 | 1.86e-41 | 148 |
MS.gene68923.t1 | MTR_2g027800 | 45.198 | 177 | 81 | 4 | 23 | 198 | 19 | 180 | 7.69e-41 | 146 |
MS.gene68923.t1 | MTR_2g027860 | 48.148 | 162 | 74 | 2 | 27 | 188 | 34 | 185 | 8.75e-41 | 147 |
MS.gene68923.t1 | MTR_1g080330 | 48.765 | 162 | 57 | 3 | 28 | 182 | 161 | 303 | 8.76e-41 | 149 |
MS.gene68923.t1 | MTR_1g090670 | 35.766 | 274 | 141 | 7 | 17 | 266 | 24 | 286 | 7.65e-40 | 144 |
MS.gene68923.t1 | MTR_7g115530 | 48.521 | 169 | 75 | 4 | 41 | 209 | 217 | 373 | 1.49e-39 | 146 |
MS.gene68923.t1 | MTR_1g053835 | 47.159 | 176 | 75 | 4 | 27 | 198 | 239 | 400 | 8.86e-39 | 144 |
MS.gene68923.t1 | MTR_7g093030 | 46.309 | 149 | 65 | 3 | 41 | 188 | 211 | 345 | 3.71e-37 | 139 |
MS.gene68923.t1 | MTR_1g080330 | 48.227 | 141 | 47 | 3 | 28 | 161 | 161 | 282 | 2.00e-32 | 124 |
MS.gene68923.t1 | MTR_7g115530 | 54.545 | 121 | 43 | 4 | 41 | 161 | 217 | 325 | 8.06e-31 | 120 |
MS.gene68923.t1 | MTR_7g068600 | 44.138 | 145 | 66 | 3 | 38 | 179 | 9 | 141 | 1.35e-28 | 112 |
MS.gene68923.t1 | MTR_1g053800 | 37.423 | 163 | 89 | 2 | 30 | 192 | 165 | 314 | 2.49e-26 | 108 |
MS.gene68923.t1 | MTR_7g115530 | 68.966 | 58 | 18 | 0 | 41 | 98 | 217 | 274 | 4.49e-23 | 98.6 |
MS.gene68923.t1 | MTR_7g115530 | 68.966 | 58 | 18 | 0 | 41 | 98 | 217 | 274 | 1.73e-22 | 97.8 |
MS.gene68923.t1 | MTR_7g093030 | 61.667 | 60 | 23 | 0 | 41 | 100 | 211 | 270 | 2.16e-21 | 93.6 |
MS.gene68923.t1 | MTR_1g053830 | 53.968 | 63 | 29 | 0 | 38 | 100 | 14 | 76 | 1.77e-20 | 85.9 |
MS.gene68923.t1 | MTR_7g115530 | 69.811 | 53 | 16 | 0 | 41 | 93 | 217 | 269 | 2.93e-20 | 90.1 |
MS.gene68923.t1 | MTR_5g041350 | 50.000 | 92 | 46 | 0 | 134 | 225 | 18 | 109 | 5.27e-20 | 89.4 |
MS.gene68923.t1 | MTR_7g115530 | 69.231 | 52 | 16 | 0 | 41 | 92 | 217 | 268 | 1.87e-19 | 88.2 |
MS.gene68923.t1 | MTR_5g041350 | 51.163 | 86 | 42 | 0 | 140 | 225 | 2 | 87 | 3.34e-19 | 86.7 |
MS.gene68923.t1 | MTR_7g069660 | 47.126 | 87 | 35 | 1 | 20 | 95 | 38 | 124 | 2.79e-18 | 85.9 |
MS.gene68923.t1 | MTR_2g023580 | 66.038 | 53 | 18 | 0 | 43 | 95 | 56 | 108 | 3.13e-18 | 83.6 |
MS.gene68923.t1 | MTR_2g084230 | 54.167 | 72 | 31 | 1 | 24 | 95 | 81 | 150 | 3.49e-17 | 82.8 |
MS.gene68923.t1 | MTR_2g084230 | 54.167 | 72 | 31 | 1 | 24 | 95 | 81 | 150 | 3.98e-17 | 81.6 |
MS.gene68923.t1 | MTR_1g112370 | 55.882 | 68 | 30 | 0 | 43 | 110 | 23 | 90 | 7.45e-17 | 81.3 |
MS.gene68923.t1 | MTR_3g450310 | 52.381 | 63 | 27 | 1 | 42 | 104 | 19 | 78 | 1.81e-16 | 78.2 |
MS.gene68923.t1 | MTR_0223s0040 | 60.000 | 60 | 21 | 1 | 43 | 102 | 19 | 75 | 1.98e-16 | 79.3 |
MS.gene68923.t1 | MTR_8g086410 | 62.264 | 53 | 20 | 0 | 43 | 95 | 112 | 164 | 2.11e-16 | 80.9 |
MS.gene68923.t1 | MTR_8g086410 | 62.264 | 53 | 20 | 0 | 43 | 95 | 110 | 162 | 2.27e-16 | 80.9 |
MS.gene68923.t1 | MTR_1g090670 | 30.876 | 217 | 120 | 6 | 74 | 266 | 1 | 211 | 2.45e-16 | 77.8 |
MS.gene68923.t1 | MTR_4g021790 | 55.072 | 69 | 29 | 2 | 29 | 96 | 154 | 221 | 2.81e-16 | 78.6 |
MS.gene68923.t1 | MTR_7g093010 | 35.036 | 137 | 78 | 1 | 41 | 177 | 212 | 337 | 6.87e-16 | 78.6 |
MS.gene68923.t1 | MTR_2g016220 | 60.377 | 53 | 21 | 0 | 43 | 95 | 90 | 142 | 2.45e-15 | 77.4 |
MS.gene68923.t1 | MTR_2g016220 | 60.377 | 53 | 21 | 0 | 43 | 95 | 90 | 142 | 2.62e-15 | 77.0 |
MS.gene68923.t1 | MTR_8g086410 | 55.172 | 58 | 26 | 0 | 43 | 100 | 112 | 169 | 2.86e-15 | 77.4 |
MS.gene68923.t1 | MTR_6g071625 | 60.377 | 53 | 21 | 0 | 43 | 95 | 203 | 255 | 6.94e-15 | 75.9 |
MS.gene68923.t1 | MTR_4g121020 | 42.157 | 102 | 53 | 3 | 38 | 134 | 107 | 207 | 7.90e-15 | 76.6 |
MS.gene68923.t1 | MTR_4g121020 | 42.157 | 102 | 53 | 3 | 38 | 134 | 211 | 311 | 9.77e-15 | 76.3 |
MS.gene68923.t1 | MTR_4g121020 | 42.157 | 102 | 53 | 3 | 38 | 134 | 211 | 311 | 1.02e-14 | 76.3 |
MS.gene68923.t1 | MTR_4g021855 | 60.000 | 55 | 21 | 1 | 42 | 96 | 168 | 221 | 1.17e-14 | 74.3 |
MS.gene68923.t1 | MTR_5g029470 | 54.237 | 59 | 27 | 0 | 43 | 101 | 220 | 278 | 2.53e-14 | 74.3 |
MS.gene68923.t1 | MTR_3g064840 | 54.237 | 59 | 27 | 0 | 43 | 101 | 275 | 333 | 3.45e-14 | 74.3 |
MS.gene68923.t1 | MTR_8g066310 | 60.377 | 53 | 21 | 0 | 43 | 95 | 174 | 226 | 3.89e-14 | 73.6 |
MS.gene68923.t1 | MTR_1g032570 | 44.578 | 83 | 37 | 2 | 38 | 112 | 127 | 208 | 4.20e-14 | 74.3 |
MS.gene68923.t1 | MTR_1g021520 | 52.542 | 59 | 28 | 0 | 43 | 101 | 127 | 185 | 4.29e-14 | 72.8 |
MS.gene68923.t1 | MTR_1g032570 | 44.578 | 83 | 37 | 2 | 38 | 112 | 196 | 277 | 4.70e-14 | 74.3 |
MS.gene68923.t1 | MTR_2g016220 | 55.172 | 58 | 25 | 1 | 43 | 99 | 90 | 147 | 5.66e-14 | 73.2 |
MS.gene68923.t1 | MTR_2g450070 | 54.237 | 59 | 26 | 1 | 38 | 96 | 209 | 266 | 8.52e-14 | 73.6 |
MS.gene68923.t1 | MTR_2g450070 | 54.237 | 59 | 26 | 1 | 38 | 96 | 209 | 266 | 8.99e-14 | 73.6 |
MS.gene68923.t1 | MTR_2g034960 | 51.667 | 60 | 28 | 1 | 37 | 96 | 206 | 264 | 1.39e-13 | 72.8 |
MS.gene68923.t1 | MTR_4g021760 | 57.407 | 54 | 22 | 1 | 42 | 95 | 169 | 221 | 1.65e-13 | 71.2 |
MS.gene68923.t1 | MTR_1g093080 | 48.529 | 68 | 35 | 0 | 42 | 109 | 211 | 278 | 9.92e-13 | 69.3 |
MS.gene68923.t1 | MTR_4g064730 | 47.222 | 72 | 36 | 2 | 39 | 109 | 128 | 198 | 1.51e-12 | 68.2 |
MS.gene68923.t1 | MTR_4g113140 | 44.156 | 77 | 42 | 1 | 39 | 114 | 232 | 308 | 1.85e-12 | 68.9 |
MS.gene68923.t1 | MTR_4g021845 | 56.863 | 51 | 21 | 1 | 42 | 92 | 168 | 217 | 2.33e-12 | 66.2 |
MS.gene68923.t1 | MTR_4g131600 | 53.333 | 60 | 27 | 1 | 37 | 96 | 196 | 254 | 2.51e-12 | 68.9 |
MS.gene68923.t1 | MTR_7g089010 | 54.545 | 55 | 24 | 1 | 42 | 96 | 91 | 144 | 3.75e-12 | 67.0 |
MS.gene68923.t1 | MTR_4g078810 | 54.386 | 57 | 25 | 1 | 42 | 98 | 158 | 213 | 3.93e-12 | 67.8 |
MS.gene68923.t1 | MTR_1g013170 | 56.364 | 55 | 23 | 1 | 42 | 96 | 191 | 244 | 4.61e-12 | 67.8 |
MS.gene68923.t1 | MTR_2g090675 | 54.545 | 55 | 24 | 1 | 44 | 98 | 163 | 216 | 5.24e-12 | 67.4 |
MS.gene68923.t1 | MTR_4g086835 | 44.595 | 74 | 40 | 1 | 39 | 111 | 271 | 344 | 5.27e-12 | 67.4 |
MS.gene68923.t1 | MTR_7g026400 | 56.364 | 55 | 23 | 1 | 42 | 96 | 157 | 210 | 6.08e-12 | 67.8 |
MS.gene68923.t1 | MTR_8g079940 | 53.448 | 58 | 26 | 1 | 42 | 99 | 209 | 265 | 1.78e-11 | 66.2 |
MS.gene68923.t1 | MTR_5g017980 | 52.727 | 55 | 26 | 0 | 42 | 96 | 193 | 247 | 2.34e-11 | 64.7 |
MS.gene68923.t1 | MTR_3g086100 | 35.398 | 113 | 56 | 3 | 38 | 144 | 124 | 225 | 3.02e-11 | 65.1 |
MS.gene68923.t1 | MTR_4g131570 | 51.667 | 60 | 28 | 1 | 38 | 97 | 199 | 257 | 3.28e-11 | 65.5 |
MS.gene68923.t1 | MTR_3g106220 | 49.153 | 59 | 29 | 1 | 38 | 96 | 194 | 251 | 3.78e-11 | 65.1 |
MS.gene68923.t1 | MTR_3g086100 | 35.398 | 113 | 56 | 3 | 38 | 144 | 195 | 296 | 4.09e-11 | 65.1 |
MS.gene68923.t1 | MTR_7g117705 | 44.304 | 79 | 38 | 2 | 42 | 115 | 191 | 268 | 5.89e-11 | 64.3 |
MS.gene68923.t1 | MTR_4g086835 | 44.595 | 74 | 39 | 2 | 39 | 111 | 271 | 343 | 8.27e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68923.t1 | AT3G04030 | 49.882 | 423 | 152 | 12 | 1 | 392 | 1 | 394 | 1.41e-116 | 345 |
MS.gene68923.t1 | AT3G04030 | 49.409 | 423 | 153 | 13 | 1 | 392 | 1 | 393 | 2.02e-113 | 337 |
MS.gene68923.t1 | AT5G18240 | 47.294 | 425 | 168 | 9 | 1 | 392 | 1 | 402 | 1.02e-111 | 333 |
MS.gene68923.t1 | AT5G18240 | 47.294 | 425 | 168 | 9 | 1 | 392 | 1 | 402 | 1.02e-111 | 333 |
MS.gene68923.t1 | AT3G04030 | 48.463 | 423 | 152 | 13 | 1 | 392 | 1 | 388 | 2.26e-109 | 326 |
MS.gene68923.t1 | AT5G18240 | 46.824 | 425 | 168 | 10 | 1 | 392 | 1 | 400 | 2.72e-108 | 324 |
MS.gene68923.t1 | AT5G18240 | 45.882 | 425 | 168 | 10 | 1 | 392 | 1 | 396 | 2.62e-104 | 313 |
MS.gene68923.t1 | AT5G18240 | 45.882 | 425 | 168 | 10 | 1 | 392 | 1 | 396 | 2.62e-104 | 313 |
MS.gene68923.t1 | AT3G04030 | 46.356 | 343 | 135 | 9 | 74 | 392 | 1 | 318 | 1.45e-79 | 248 |
MS.gene68923.t1 | AT3G04030 | 44.606 | 343 | 135 | 10 | 74 | 392 | 1 | 312 | 4.16e-72 | 228 |
MS.gene68923.t1 | AT5G18240 | 41.908 | 346 | 148 | 7 | 74 | 392 | 1 | 320 | 3.80e-68 | 218 |
MS.gene68923.t1 | AT1G69580 | 55.238 | 210 | 77 | 4 | 28 | 226 | 20 | 223 | 9.13e-63 | 205 |
MS.gene68923.t1 | AT1G69580 | 54.976 | 211 | 77 | 4 | 28 | 226 | 20 | 224 | 1.07e-62 | 205 |
MS.gene68923.t1 | AT4G13640 | 54.255 | 188 | 84 | 2 | 26 | 212 | 21 | 207 | 9.05e-61 | 198 |
MS.gene68923.t1 | AT3G24120 | 53.927 | 191 | 86 | 2 | 26 | 215 | 25 | 214 | 3.17e-60 | 197 |
MS.gene68923.t1 | AT4G13640 | 53.403 | 191 | 84 | 3 | 26 | 212 | 21 | 210 | 9.52e-59 | 193 |
MS.gene68923.t1 | AT3G24120 | 53.093 | 194 | 86 | 3 | 26 | 215 | 25 | 217 | 4.25e-58 | 191 |
MS.gene68923.t1 | AT1G79430 | 55.689 | 167 | 53 | 3 | 32 | 192 | 24 | 175 | 2.71e-52 | 178 |
MS.gene68923.t1 | AT5G45580 | 48.045 | 179 | 77 | 2 | 26 | 193 | 7 | 180 | 8.62e-47 | 161 |
MS.gene68923.t1 | AT5G45580 | 48.521 | 169 | 71 | 2 | 36 | 193 | 1 | 164 | 2.31e-44 | 155 |
MS.gene68923.t1 | AT2G01060 | 49.693 | 163 | 64 | 4 | 41 | 202 | 14 | 159 | 1.93e-42 | 150 |
MS.gene68923.t1 | AT3G12730 | 50.000 | 158 | 71 | 3 | 31 | 186 | 12 | 163 | 5.59e-42 | 147 |
MS.gene68923.t1 | AT4G28610 | 46.237 | 186 | 77 | 5 | 41 | 226 | 224 | 386 | 1.90e-40 | 148 |
MS.gene68923.t1 | AT5G29000 | 51.408 | 142 | 60 | 2 | 41 | 182 | 187 | 319 | 2.24e-40 | 147 |
MS.gene68923.t1 | AT5G29000 | 51.408 | 142 | 60 | 2 | 41 | 182 | 187 | 319 | 2.24e-40 | 147 |
MS.gene68923.t1 | AT5G29000 | 51.408 | 142 | 60 | 2 | 41 | 182 | 230 | 362 | 4.30e-40 | 147 |
MS.gene68923.t1 | AT3G04450 | 44.970 | 169 | 81 | 3 | 14 | 182 | 173 | 329 | 3.43e-39 | 144 |
MS.gene68923.t1 | AT3G04450 | 44.970 | 169 | 81 | 3 | 14 | 182 | 173 | 329 | 3.43e-39 | 144 |
MS.gene68923.t1 | AT3G04450 | 44.970 | 169 | 81 | 3 | 14 | 182 | 213 | 369 | 5.91e-39 | 145 |
MS.gene68923.t1 | AT5G06800 | 45.405 | 185 | 83 | 5 | 6 | 187 | 163 | 332 | 1.05e-37 | 140 |
MS.gene68923.t1 | AT5G06800 | 43.243 | 185 | 82 | 4 | 6 | 187 | 163 | 327 | 1.91e-37 | 139 |
MS.gene68923.t1 | AT3G13040 | 47.973 | 148 | 69 | 2 | 42 | 189 | 241 | 380 | 4.42e-34 | 132 |
MS.gene68923.t1 | AT3G13040 | 47.973 | 148 | 69 | 2 | 42 | 189 | 241 | 380 | 4.42e-34 | 132 |
MS.gene68923.t1 | AT3G13040 | 47.973 | 148 | 69 | 2 | 42 | 189 | 241 | 380 | 4.42e-34 | 132 |
MS.gene68923.t1 | AT2G20400 | 45.752 | 153 | 65 | 3 | 44 | 196 | 233 | 367 | 1.72e-33 | 129 |
MS.gene68923.t1 | AT2G20400 | 45.752 | 153 | 64 | 4 | 44 | 196 | 233 | 366 | 9.47e-32 | 124 |
MS.gene68923.t1 | AT1G79430 | 48.800 | 125 | 43 | 3 | 74 | 192 | 1 | 110 | 8.42e-26 | 105 |
MS.gene68923.t1 | AT2G01060 | 45.669 | 127 | 51 | 4 | 77 | 202 | 1 | 110 | 7.32e-24 | 99.4 |
MS.gene68923.t1 | AT3G04450 | 52.941 | 85 | 37 | 1 | 14 | 98 | 213 | 294 | 2.96e-23 | 99.4 |
MS.gene68923.t1 | AT5G29000 | 68.966 | 58 | 18 | 0 | 41 | 98 | 230 | 287 | 1.39e-22 | 97.4 |
MS.gene68923.t1 | AT5G06800 | 47.368 | 95 | 43 | 1 | 6 | 100 | 163 | 250 | 1.01e-21 | 94.4 |
MS.gene68923.t1 | AT2G06020 | 46.988 | 83 | 40 | 2 | 27 | 105 | 68 | 150 | 8.74e-18 | 83.6 |
MS.gene68923.t1 | AT1G14600 | 64.286 | 56 | 20 | 0 | 43 | 98 | 24 | 79 | 1.15e-17 | 82.4 |
MS.gene68923.t1 | AT2G42660 | 62.264 | 53 | 20 | 0 | 43 | 95 | 51 | 103 | 3.18e-17 | 81.3 |
MS.gene68923.t1 | AT3G12730 | 42.609 | 115 | 58 | 3 | 74 | 186 | 1 | 109 | 4.41e-17 | 79.0 |
MS.gene68923.t1 | AT4G04605 | 62.264 | 53 | 20 | 0 | 43 | 95 | 15 | 67 | 4.91e-17 | 79.7 |
MS.gene68923.t1 | AT2G02060 | 64.151 | 53 | 19 | 0 | 43 | 95 | 30 | 82 | 9.27e-17 | 79.7 |
MS.gene68923.t1 | AT2G02060 | 64.151 | 53 | 19 | 0 | 43 | 95 | 30 | 82 | 9.27e-17 | 79.7 |
MS.gene68923.t1 | AT2G38300 | 62.264 | 53 | 20 | 0 | 43 | 95 | 55 | 107 | 1.07e-16 | 80.9 |
MS.gene68923.t1 | AT2G40260 | 62.264 | 53 | 20 | 0 | 43 | 95 | 83 | 135 | 2.14e-16 | 80.9 |
MS.gene68923.t1 | AT5G42630 | 41.071 | 112 | 59 | 4 | 2 | 112 | 69 | 174 | 9.73e-16 | 76.3 |
MS.gene68923.t1 | AT5G16560 | 55.932 | 59 | 26 | 0 | 43 | 101 | 220 | 278 | 2.81e-15 | 77.4 |
MS.gene68923.t1 | AT5G42630 | 41.071 | 112 | 59 | 4 | 2 | 112 | 69 | 174 | 2.98e-15 | 75.9 |
MS.gene68923.t1 | AT4G04580 | 56.604 | 53 | 23 | 0 | 43 | 95 | 15 | 67 | 5.00e-15 | 72.8 |
MS.gene68923.t1 | AT1G32240 | 37.168 | 113 | 51 | 3 | 2 | 111 | 188 | 283 | 1.08e-14 | 75.5 |
MS.gene68923.t1 | AT1G32240 | 37.168 | 113 | 51 | 3 | 2 | 111 | 188 | 283 | 1.17e-14 | 75.1 |
MS.gene68923.t1 | AT4G17695 | 50.704 | 71 | 34 | 1 | 43 | 112 | 165 | 235 | 1.43e-14 | 74.3 |
MS.gene68923.t1 | AT3G46640 | 45.556 | 90 | 45 | 3 | 21 | 109 | 125 | 211 | 3.99e-14 | 73.2 |
MS.gene68923.t1 | AT3G16857 | 58.182 | 55 | 22 | 1 | 42 | 96 | 167 | 220 | 6.01e-14 | 73.9 |
MS.gene68923.t1 | AT3G16857 | 58.182 | 55 | 22 | 1 | 42 | 96 | 237 | 290 | 6.20e-14 | 73.9 |
MS.gene68923.t1 | AT3G46640 | 45.556 | 90 | 45 | 3 | 21 | 109 | 125 | 211 | 6.35e-14 | 72.4 |
MS.gene68923.t1 | AT3G46640 | 45.556 | 90 | 45 | 3 | 21 | 109 | 125 | 211 | 6.35e-14 | 72.4 |
MS.gene68923.t1 | AT3G16857 | 58.182 | 55 | 22 | 1 | 42 | 96 | 237 | 290 | 6.84e-14 | 73.9 |
MS.gene68923.t1 | AT2G40970 | 46.753 | 77 | 35 | 2 | 25 | 96 | 83 | 158 | 5.86e-13 | 68.6 |
MS.gene68923.t1 | AT3G10760 | 44.048 | 84 | 45 | 2 | 42 | 124 | 105 | 187 | 9.59e-13 | 69.3 |
MS.gene68923.t1 | AT5G59570 | 51.724 | 58 | 27 | 1 | 39 | 96 | 138 | 194 | 9.60e-13 | 68.9 |
MS.gene68923.t1 | AT5G59570 | 51.724 | 58 | 27 | 1 | 39 | 96 | 138 | 194 | 9.60e-13 | 68.9 |
MS.gene68923.t1 | AT5G05090 | 54.545 | 55 | 24 | 1 | 42 | 96 | 81 | 134 | 1.18e-12 | 68.2 |
MS.gene68923.t1 | AT2G03500 | 51.724 | 58 | 28 | 0 | 39 | 96 | 230 | 287 | 3.19e-12 | 68.2 |
MS.gene68923.t1 | AT5G58080 | 51.471 | 68 | 32 | 1 | 29 | 96 | 181 | 247 | 3.62e-12 | 68.6 |
MS.gene68923.t1 | AT2G20570 | 56.140 | 57 | 24 | 1 | 42 | 98 | 153 | 208 | 4.78e-12 | 67.4 |
MS.gene68923.t1 | AT2G20570 | 56.364 | 55 | 23 | 1 | 44 | 98 | 171 | 224 | 5.23e-12 | 67.4 |
MS.gene68923.t1 | AT2G01760 | 50.909 | 55 | 26 | 1 | 42 | 96 | 135 | 188 | 7.25e-12 | 66.2 |
MS.gene68923.t1 | AT1G25550 | 51.724 | 58 | 28 | 0 | 39 | 96 | 206 | 263 | 7.39e-12 | 66.6 |
MS.gene68923.t1 | AT5G44190 | 50.877 | 57 | 27 | 1 | 42 | 98 | 147 | 202 | 7.97e-12 | 66.6 |
MS.gene68923.t1 | AT5G44190 | 50.877 | 57 | 27 | 1 | 42 | 98 | 147 | 202 | 9.97e-12 | 66.2 |
MS.gene68923.t1 | AT2G01760 | 50.909 | 55 | 26 | 1 | 42 | 96 | 200 | 253 | 1.23e-11 | 66.2 |
MS.gene68923.t1 | AT2G01760 | 50.909 | 55 | 26 | 1 | 42 | 96 | 228 | 281 | 1.82e-11 | 65.9 |
MS.gene68923.t1 | AT3G62670 | 50.000 | 62 | 27 | 1 | 38 | 95 | 207 | 268 | 2.32e-11 | 65.5 |
MS.gene68923.t1 | AT5G45580 | 35.652 | 115 | 58 | 2 | 90 | 193 | 16 | 125 | 3.60e-11 | 63.2 |
MS.gene68923.t1 | AT4G04555 | 49.057 | 53 | 27 | 0 | 43 | 95 | 15 | 67 | 5.83e-11 | 59.7 |
MS.gene68923.t1 | AT5G07210 | 46.377 | 69 | 35 | 2 | 29 | 96 | 208 | 275 | 5.95e-11 | 64.7 |
MS.gene68923.t1 | AT5G07210 | 46.377 | 69 | 35 | 2 | 29 | 96 | 216 | 283 | 6.15e-11 | 64.7 |
MS.gene68923.t1 | AT1G68670 | 44.286 | 70 | 39 | 0 | 39 | 108 | 212 | 281 | 8.97e-11 | 63.2 |
Find 67 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCCCTTGTTATGTATTTCT+TGG | 0.160531 | 6.2:+21322286 | None:intergenic |
CAAGGAACATGCATGCTTTA+AGG | 0.246102 | 6.2:-21324394 | MS.gene68923:CDS |
TTCATGAAGAAGAAAACTTT+TGG | 0.259021 | 6.2:-21322018 | MS.gene68923:CDS |
CATAACAAGGGCATGAATTA+TGG | 0.265019 | 6.2:-21322276 | MS.gene68923:CDS |
CCTGTAGATGACTCTTTAAA+TGG | 0.268102 | 6.2:+21323974 | None:intergenic |
AAGAGACTTGACGTCCTTTC+TGG | 0.283871 | 6.2:+21322058 | None:intergenic |
ATGCTAAGCCAAGACTAAAA+TGG | 0.303611 | 6.2:-21324313 | MS.gene68923:CDS |
ATTGTTCTTACTTGTTTGTT+TGG | 0.311419 | 6.2:+21323464 | None:intergenic |
AATACTGGCAGCAGTAAAAT+TGG | 0.320029 | 6.2:-21323699 | MS.gene68923:intron |
ATGAATTATGGAGCTTATAA+TGG | 0.338954 | 6.2:-21322264 | MS.gene68923:CDS |
TTTCTTGATGGCAGAAATAC+AGG | 0.364378 | 6.2:-21323749 | MS.gene68923:intron |
GTTCTGAAAATTTGGAATCA+AGG | 0.366198 | 6.2:+21322412 | None:intergenic |
ACACTAGGAAGACAAAATTT+AGG | 0.366651 | 6.2:-21322501 | MS.gene68923:CDS |
GAAACCATTGATTATTCAAT+GGG | 0.380276 | 6.2:-21322345 | MS.gene68923:CDS |
TATTACAAAGGAAGATTTAG+AGG | 0.380797 | 6.2:-21321987 | MS.gene68923:CDS |
TCTTTGAGAGTCCTCACTAT+TGG | 0.388306 | 6.2:+21322311 | None:intergenic |
TTGAAACTTATGGGAATTCC+TGG | 0.388557 | 6.2:-21324009 | MS.gene68923:CDS |
GGAAATGGAAGTTCAGATTC+AGG | 0.388688 | 6.2:-21324353 | MS.gene68923:CDS |
CACATGCAAGGAGGAGGAAA+TGG | 0.404031 | 6.2:-21324368 | MS.gene68923:CDS |
ATGAATGGACAAACAAATAC+TGG | 0.416324 | 6.2:-21323714 | MS.gene68923:CDS |
ATCAAATGATAAAGTACTAA+AGG | 0.422241 | 6.2:-21322196 | MS.gene68923:CDS |
CCTTCACTTCTTCACACAAT+GGG | 0.422809 | 6.2:+21322241 | None:intergenic |
AAGACAAAATTTAGGAGCTA+TGG | 0.425889 | 6.2:-21322493 | MS.gene68923:CDS |
TGAAACCATTGATTATTCAA+TGG | 0.427403 | 6.2:-21322346 | MS.gene68923:CDS |
TTGACTTGAATGGTTTCAGC+TGG | 0.431912 | 6.2:-21321805 | MS.gene68923:CDS |
GTCCTTTCTGGTACTTCATC+CGG | 0.441823 | 6.2:+21322070 | None:intergenic |
TCAAATGATAAAGTACTAAA+GGG | 0.461053 | 6.2:-21322195 | MS.gene68923:intron |
ATGAAACGTTCATGAAGATC+TGG | 0.465503 | 6.2:+21324287 | None:intergenic |
AAAGGAAGATTTAGAGGGTG+AGG | 0.471041 | 6.2:-21321981 | MS.gene68923:CDS |
TAAAAGAAATGAATGTACTT+TGG | 0.477579 | 6.2:-21322389 | MS.gene68923:CDS |
ACTCCCCATTGAATAATCAA+TGG | 0.486204 | 6.2:+21322341 | None:intergenic |
AAGAAGCACCATTGTCATCA+TGG | 0.491000 | 6.2:+21321843 | None:intergenic |
AGGATCAGTAGAAGCATGAA+TGG | 0.507423 | 6.2:-21323729 | MS.gene68923:CDS |
ACACTTACAACTACGAATAG+AGG | 0.508720 | 6.2:-21322568 | MS.gene68923:CDS |
ATTGAAGCAGTCAATCAACT+TGG | 0.511257 | 6.2:-21324266 | MS.gene68923:CDS |
TCACCTTCTTGTGTTTGTTG+AGG | 0.515103 | 6.2:+21322366 | None:intergenic |
AAGATTTAGAGGGTGAGGAA+TGG | 0.517235 | 6.2:-21321976 | MS.gene68923:CDS |
CATATGAAAGATTTAAGCAT+AGG | 0.525890 | 6.2:-21323490 | MS.gene68923:CDS |
CCATTTAAAGAGTCATCTAC+AGG | 0.530254 | 6.2:-21323974 | MS.gene68923:intron |
AGACAAAATTTAGGAGCTAT+GGG | 0.535664 | 6.2:-21322492 | MS.gene68923:CDS |
TCCTTCACTTCTTCACACAA+TGG | 0.537283 | 6.2:+21322240 | None:intergenic |
AAATGGTATAATGTAAGTCC+AGG | 0.549657 | 6.2:+21323991 | None:intergenic |
TTTGGAATCAAGGCTTTCAG+TGG | 0.551708 | 6.2:+21322422 | None:intergenic |
CAACTACGAATAGAGGCTCA+AGG | 0.553992 | 6.2:-21322561 | MS.gene68923:CDS |
AGTCTCTTGTCTATGAACAT+AGG | 0.562654 | 6.2:-21322043 | MS.gene68923:CDS |
TAGTACTTTATCATTTGATG+AGG | 0.567615 | 6.2:+21322200 | None:intergenic |
GCTGATGTTGCTGATGATGA+TGG | 0.568202 | 6.2:+21324423 | None:intergenic |
GAAGCAGTCAATCAACTTGG+AGG | 0.572703 | 6.2:-21324263 | MS.gene68923:CDS |
AGCAGAATGTCAGAATCAAG+TGG | 0.575801 | 6.2:-21323517 | MS.gene68923:CDS |
AGAAGCACCATTGTCATCAT+GGG | 0.577045 | 6.2:+21321844 | None:intergenic |
AGGATGCACATGCAAGGAGG+AGG | 0.577430 | 6.2:-21324374 | MS.gene68923:CDS |
TATGGGACTTGATGCTGCAA+AGG | 0.581623 | 6.2:-21322475 | MS.gene68923:CDS |
ATTACAAAGGAAGATTTAGA+GGG | 0.583154 | 6.2:-21321986 | MS.gene68923:CDS |
AGTACTTTATCATTTGATGA+GGG | 0.589703 | 6.2:+21322201 | None:intergenic |
AGACCAAGAAATACATAACA+AGG | 0.589922 | 6.2:-21322289 | MS.gene68923:CDS |
TGGCCTCAACAAACACAAGA+AGG | 0.602378 | 6.2:-21322369 | MS.gene68923:CDS |
AGCAACATCAGCAACAAGCA+AGG | 0.613902 | 6.2:-21324412 | MS.gene68923:CDS |
CCCATTGTGTGAAGAAGTGA+AGG | 0.616973 | 6.2:-21322241 | MS.gene68923:CDS |
GCTTTAAGGATGCACATGCA+AGG | 0.621046 | 6.2:-21324380 | MS.gene68923:CDS |
AAGATTACATGAGCAGCTTG+AGG | 0.632899 | 6.2:-21323300 | MS.gene68923:intron |
AACTACGAATAGAGGCTCAA+GGG | 0.640142 | 6.2:-21322560 | MS.gene68923:CDS |
GAGTTTCTTAACCAATAGTG+AGG | 0.644446 | 6.2:-21322322 | MS.gene68923:CDS |
GACCGGATGAAGTACCAGAA+AGG | 0.645035 | 6.2:-21322072 | MS.gene68923:CDS |
GACCAAGAAATACATAACAA+GGG | 0.647897 | 6.2:-21322288 | MS.gene68923:CDS |
TTGAATTCCCATGATGACAA+TGG | 0.705519 | 6.2:-21321851 | MS.gene68923:CDS |
AAACCATTGATTATTCAATG+GGG | 0.713201 | 6.2:-21322344 | MS.gene68923:CDS |
TTAAGGATGCACATGCAAGG+AGG | 0.740458 | 6.2:-21324377 | MS.gene68923:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTTAATAATAATTGTGA+CGG | + | chr6.2:21323591-21323610 | None:intergenic | 10.0% |
!! | AATTTGTACATATATAATTT+AGG | + | chr6.2:21322013-21322032 | None:intergenic | 10.0% |
!! | TATAAATACAAATAGTAAAA+GGG | + | chr6.2:21322300-21322319 | None:intergenic | 10.0% |
!! | GTATAAATACAAATAGTAAA+AGG | + | chr6.2:21322301-21322320 | None:intergenic | 15.0% |
!!! | CTTTTATATTTTGAACAAAA+TGG | + | chr6.2:21322809-21322828 | None:intergenic | 15.0% |
!!! | GTCTTTTATTTCTTATAAAT+AGG | - | chr6.2:21324133-21324152 | MS.gene68923:intron | 15.0% |
!!! | TTATGAAGTGATTTAAAATT+TGG | + | chr6.2:21323468-21323487 | None:intergenic | 15.0% |
!! | AGAATAAGAGAAATAGAAAA+GGG | + | chr6.2:21323202-21323221 | None:intergenic | 20.0% |
!! | CAAAAATGATCAATGATTTA+CGG | - | chr6.2:21323172-21323191 | MS.gene68923:intron | 20.0% |
!! | CTTAAAGGTTATATAAATGA+TGG | + | chr6.2:21322088-21322107 | None:intergenic | 20.0% |
!! | TAAAAGAAATGAATGTACTT+TGG | - | chr6.2:21323838-21323857 | MS.gene68923:intron | 20.0% |
!! | TAGAATAAGAGAAATAGAAA+AGG | + | chr6.2:21323203-21323222 | None:intergenic | 20.0% |
!! | TGAAAAGTAGTAAAAATAGA+TGG | + | chr6.2:21322403-21322422 | None:intergenic | 20.0% |
!! | TTACAATTACAAATGATTGT+CGG | + | chr6.2:21323424-21323443 | None:intergenic | 20.0% |
!! | TTCATTTATATCTGAATTTC+TGG | + | chr6.2:21322878-21322897 | None:intergenic | 20.0% |
!!! | AAAAACAGTTTTGAAACTTA+TGG | - | chr6.2:21322208-21322227 | MS.gene68923:CDS | 20.0% |
!!! | AAAACAGTTTTGAAACTTAT+GGG | - | chr6.2:21322209-21322228 | MS.gene68923:CDS | 20.0% |
!!! | ATAAGTTTCAAAACTGTTTT+TGG | + | chr6.2:21322209-21322228 | None:intergenic | 20.0% |
!!! | ATCAAATGATAAAGTACTAA+AGG | - | chr6.2:21324031-21324050 | MS.gene68923:CDS | 20.0% |
!!! | TCAAATGATAAAGTACTAAA+GGG | - | chr6.2:21324032-21324051 | MS.gene68923:CDS | 20.0% |
!!! | TTATTGATTTACTTTCTTGA+TGG | - | chr6.2:21322466-21322485 | MS.gene68923:CDS | 20.0% |
!!! | TTATTTCTTATAAATAGGAC+CGG | - | chr6.2:21324138-21324157 | MS.gene68923:intron | 20.0% |
!!! | TTCATATTTTTGAGTTTGTA+TGG | - | chr6.2:21322419-21322438 | MS.gene68923:CDS | 20.0% |
!!! | TTCTTTTAGTTCTGAAAATT+TGG | + | chr6.2:21323826-21323845 | None:intergenic | 20.0% |
!!! | TTTTCAAGATCTAATCTAAA+AGG | + | chr6.2:21323049-21323068 | None:intergenic | 20.0% |
!!! | TTTTGATCCTAATATAATTG+AGG | - | chr6.2:21323563-21323582 | MS.gene68923:intron | 20.0% |
! | AAAGAATATTCTCTAATGTG+AGG | - | chr6.2:21322825-21322844 | MS.gene68923:intron | 25.0% |
! | ACTTTAAGCATCAATCTTAA+AGG | + | chr6.2:21322103-21322122 | None:intergenic | 25.0% |
! | AGTACTTTATCATTTGATGA+GGG | + | chr6.2:21324029-21324048 | None:intergenic | 25.0% |
! | AGTTTGTATGGTTTATTTGA+AGG | - | chr6.2:21322431-21322450 | MS.gene68923:CDS | 25.0% |
! | ATGAATTATGGAGCTTATAA+TGG | - | chr6.2:21323963-21323982 | MS.gene68923:intron | 25.0% |
! | ATTACAAAGGAAGATTTAGA+GGG | - | chr6.2:21324241-21324260 | MS.gene68923:intron | 25.0% |
! | ATTGTTCTTACTTGTTTGTT+TGG | + | chr6.2:21322766-21322785 | None:intergenic | 25.0% |
! | CATATGAAAGATTTAAGCAT+AGG | - | chr6.2:21322737-21322756 | MS.gene68923:intron | 25.0% |
! | CTTAAAGTGTAAAACATCTT+TGG | - | chr6.2:21322115-21322134 | MS.gene68923:intron | 25.0% |
! | GTTAAAAAATCACTGTACTA+TGG | + | chr6.2:21323256-21323275 | None:intergenic | 25.0% |
! | TAGTACTTTATCATTTGATG+AGG | + | chr6.2:21324030-21324049 | None:intergenic | 25.0% |
! | TATTACAAAGGAAGATTTAG+AGG | - | chr6.2:21324240-21324259 | MS.gene68923:intron | 25.0% |
! | TATTCTTCTTATGAAAGACA+TGG | + | chr6.2:21322598-21322617 | None:intergenic | 25.0% |
!! | AAACCATTGATTATTCAATG+GGG | - | chr6.2:21323883-21323902 | MS.gene68923:intron | 25.0% |
!! | AACCATTCAAGTCAAATTTT+TGG | + | chr6.2:21324417-21324436 | None:intergenic | 25.0% |
!! | GAAACCATTGATTATTCAAT+GGG | - | chr6.2:21323882-21323901 | MS.gene68923:intron | 25.0% |
!! | GAAATTTGTCGATTATCAAT+AGG | + | chr6.2:21324079-21324098 | None:intergenic | 25.0% |
!! | TCATGAAGAAGAAAACTTTT+GGG | - | chr6.2:21324210-21324229 | MS.gene68923:intron | 25.0% |
!! | TGAAACCATTGATTATTCAA+TGG | - | chr6.2:21323881-21323900 | MS.gene68923:intron | 25.0% |
!! | TTCATGAAGAAGAAAACTTT+TGG | - | chr6.2:21324209-21324228 | MS.gene68923:intron | 25.0% |
!!! | AAACTTCACTACATTTTGAT+GGG | + | chr6.2:21323500-21323519 | None:intergenic | 25.0% |
!!! | ATATAAATGATGGATCACAT+TGG | + | chr6.2:21322078-21322097 | None:intergenic | 25.0% |
AAATGGTATAATGTAAGTCC+AGG | + | chr6.2:21322239-21322258 | None:intergenic | 30.0% | |
AAGACAAAATTTAGGAGCTA+TGG | - | chr6.2:21323734-21323753 | MS.gene68923:CDS | 30.0% | |
ACACTAGGAAGACAAAATTT+AGG | - | chr6.2:21323726-21323745 | MS.gene68923:CDS | 30.0% | |
AGACAAAATTTAGGAGCTAT+GGG | - | chr6.2:21323735-21323754 | MS.gene68923:CDS | 30.0% | |
AGACCAAGAAATACATAACA+AGG | - | chr6.2:21323938-21323957 | MS.gene68923:intron | 30.0% | |
AGTGATTTGAATCCTCAATT+TGG | - | chr6.2:21323012-21323031 | MS.gene68923:intron | 30.0% | |
ATCAGTTCTTGAAAAAGCTA+AGG | - | chr6.2:21323701-21323720 | MS.gene68923:CDS | 30.0% | |
ATGAATGGACAAACAAATAC+TGG | - | chr6.2:21322513-21322532 | MS.gene68923:CDS | 30.0% | |
ATTTGAACTAAAATGACCGA+TGG | + | chr6.2:21323107-21323126 | None:intergenic | 30.0% | |
CTAATCTAAAAGGTCCTATA+GGG | + | chr6.2:21323039-21323058 | None:intergenic | 30.0% | |
GAAGATGATCCAAATCTATT+AGG | + | chr6.2:21323234-21323253 | None:intergenic | 30.0% | |
GACCAAGAAATACATAACAA+GGG | - | chr6.2:21323939-21323958 | MS.gene68923:intron | 30.0% | |
TAATCTAAAAGGTCCTATAG+GGG | + | chr6.2:21323038-21323057 | None:intergenic | 30.0% | |
TCGTTGAAATTGTAAACCAT+CGG | - | chr6.2:21323088-21323107 | MS.gene68923:intron | 30.0% | |
TCTAATCTAAAAGGTCCTAT+AGG | + | chr6.2:21323040-21323059 | None:intergenic | 30.0% | |
! | ATGAAGAAGAAAACTTTTGG+GGG | - | chr6.2:21324212-21324231 | MS.gene68923:intron | 30.0% |
! | CAAACTTCACTACATTTTGA+TGG | + | chr6.2:21323501-21323520 | None:intergenic | 30.0% |
! | CATGAAGAAGAAAACTTTTG+GGG | - | chr6.2:21324211-21324230 | MS.gene68923:intron | 30.0% |
!! | AATTAATTTTGACGCACTGT+CGG | - | chr6.2:21322029-21322048 | MS.gene68923:CDS | 30.0% |
!! | AGCCAAAAATTTGACTTGAA+TGG | - | chr6.2:21324412-21324431 | MS.gene68923:CDS | 30.0% |
!! | GTTCTGAAAATTTGGAATCA+AGG | + | chr6.2:21323818-21323837 | None:intergenic | 30.0% |
!!! | CTTTTTCAAGAACTGATTGA+AGG | + | chr6.2:21323698-21323717 | None:intergenic | 30.0% |
AACAATGTCTGACTACTTCT+AGG | - | chr6.2:21323368-21323387 | MS.gene68923:intron | 35.0% | |
AATACTGGCAGCAGTAAAAT+TGG | - | chr6.2:21322528-21322547 | MS.gene68923:CDS | 35.0% | |
ACACTTACAACTACGAATAG+AGG | - | chr6.2:21323659-21323678 | MS.gene68923:intron | 35.0% | |
ACTCCCCATTGAATAATCAA+TGG | + | chr6.2:21323889-21323908 | None:intergenic | 35.0% | |
AGAAGTAGTCAGACATTGTT+AGG | + | chr6.2:21323368-21323387 | None:intergenic | 35.0% | |
AGACAACATATTACTGCATG+TGG | - | chr6.2:21323278-21323297 | MS.gene68923:intron | 35.0% | |
AGTCTCTTGTCTATGAACAT+AGG | - | chr6.2:21324184-21324203 | MS.gene68923:intron | 35.0% | |
ATGAAACGTTCATGAAGATC+TGG | + | chr6.2:21321943-21321962 | None:intergenic | 35.0% | |
ATGCGCTAACCTAATAGATT+TGG | - | chr6.2:21323222-21323241 | MS.gene68923:intron | 35.0% | |
ATGCTAAGCCAAGACTAAAA+TGG | - | chr6.2:21321914-21321933 | MS.gene68923:CDS | 35.0% | |
ATTGAAGCAGTCAATCAACT+TGG | - | chr6.2:21321961-21321980 | MS.gene68923:CDS | 35.0% | |
CCATTTAAAGAGTCATCTAC+AGG | - | chr6.2:21322253-21322272 | MS.gene68923:CDS | 35.0% | |
CCTGTAGATGACTCTTTAAA+TGG | + | chr6.2:21322256-21322275 | None:intergenic | 35.0% | |
CGATTATCAATAGGACATGA+GGG | + | chr6.2:21324070-21324089 | None:intergenic | 35.0% | |
GAAAAAGCTAAGGAAACACT+AGG | - | chr6.2:21323711-21323730 | MS.gene68923:CDS | 35.0% | |
GAGTTTCTTAACCAATAGTG+AGG | - | chr6.2:21323905-21323924 | MS.gene68923:intron | 35.0% | |
TCGATTATCAATAGGACATG+AGG | + | chr6.2:21324071-21324090 | None:intergenic | 35.0% | |
TTGAAACTTATGGGAATTCC+TGG | - | chr6.2:21322218-21322237 | MS.gene68923:CDS | 35.0% | |
TTGAATTCCCATGATGACAA+TGG | - | chr6.2:21324376-21324395 | MS.gene68923:CDS | 35.0% | |
TTGGGGGAGAAATATTACAA+AGG | - | chr6.2:21324228-21324247 | MS.gene68923:intron | 35.0% | |
! | CATAACAAGGGCATGAATTA+TGG | - | chr6.2:21323951-21323970 | MS.gene68923:intron | 35.0% |
! | TGCCCTTGTTATGTATTTCT+TGG | + | chr6.2:21323944-21323963 | None:intergenic | 35.0% |
! | TTTCTTGATGGCAGAAATAC+AGG | - | chr6.2:21322478-21322497 | MS.gene68923:CDS | 35.0% |
!! | AGAAAAAGTGCTGAATCTAG+TGG | - | chr6.2:21324280-21324299 | MS.gene68923:CDS | 35.0% |
AAAGGAAGATTTAGAGGGTG+AGG | - | chr6.2:21324246-21324265 | MS.gene68923:intron | 40.0% | |
AACTACGAATAGAGGCTCAA+GGG | - | chr6.2:21323667-21323686 | MS.gene68923:intron | 40.0% | |
AAGATTACATGAGCAGCTTG+AGG | - | chr6.2:21322927-21322946 | MS.gene68923:intron | 40.0% | |
AAGATTTAGAGGGTGAGGAA+TGG | - | chr6.2:21324251-21324270 | MS.gene68923:intron | 40.0% | |
ACCTAAATGCGTCTTTAAGC+AGG | - | chr6.2:21323629-21323648 | MS.gene68923:intron | 40.0% | |
ACCTGCTTAAAGACGCATTT+AGG | + | chr6.2:21323633-21323652 | None:intergenic | 40.0% | |
AGCAGAATGTCAGAATCAAG+TGG | - | chr6.2:21322710-21322729 | MS.gene68923:intron | 40.0% | |
CAAGGAACATGCATGCTTTA+AGG | - | chr6.2:21321833-21321852 | MS.gene68923:CDS | 40.0% | |
CCTTCACTTCTTCACACAAT+GGG | + | chr6.2:21323989-21324008 | None:intergenic | 40.0% | |
GGAAATGGAAGTTCAGATTC+AGG | - | chr6.2:21321874-21321893 | MS.gene68923:CDS | 40.0% | |
GGCAGCAGTAAAATTGGTAA+GGG | - | chr6.2:21322534-21322553 | MS.gene68923:CDS | 40.0% | |
TCCTTCACTTCTTCACACAA+TGG | + | chr6.2:21323990-21324009 | None:intergenic | 40.0% | |
TGCTTGACATTGACAACACA+TGG | - | chr6.2:21323148-21323167 | MS.gene68923:intron | 40.0% | |
TGGCAGCAGTAAAATTGGTA+AGG | - | chr6.2:21322533-21322552 | MS.gene68923:CDS | 40.0% | |
! | AGGATCAGTAGAAGCATGAA+TGG | - | chr6.2:21322498-21322517 | MS.gene68923:CDS | 40.0% |
! | TCACCTTCTTGTGTTTGTTG+AGG | + | chr6.2:21323864-21323883 | None:intergenic | 40.0% |
! | TCTTTGAGAGTCCTCACTAT+TGG | + | chr6.2:21323919-21323938 | None:intergenic | 40.0% |
! | TTGACTTGAATGGTTTCAGC+TGG | - | chr6.2:21324422-21324441 | MS.gene68923:CDS | 40.0% |
! | TTTGGAATCAAGGCTTTCAG+TGG | + | chr6.2:21323808-21323827 | None:intergenic | 40.0% |
!! | AAGAAGCACCATTGTCATCA+TGG | + | chr6.2:21324387-21324406 | None:intergenic | 40.0% |
!! | AGAAGCACCATTGTCATCAT+GGG | + | chr6.2:21324386-21324405 | None:intergenic | 40.0% |
!! | CTTGTCACTACTTCTGAAGT+TGG | + | chr6.2:21322692-21322711 | None:intergenic | 40.0% |
!! | TCTGGTGTCCATTTTAGTCT+TGG | + | chr6.2:21321925-21321944 | None:intergenic | 40.0% |
AAGAGACTTGACGTCCTTTC+TGG | + | chr6.2:21324172-21324191 | None:intergenic | 45.0% | |
AGCAACATCAGCAACAAGCA+AGG | - | chr6.2:21321815-21321834 | MS.gene68923:CDS | 45.0% | |
ATCCTCAATTTGGCCCCTAT+AGG | - | chr6.2:21323022-21323041 | MS.gene68923:intron | 45.0% | |
CAACTACGAATAGAGGCTCA+AGG | - | chr6.2:21323666-21323685 | MS.gene68923:intron | 45.0% | |
CCCATTGTGTGAAGAAGTGA+AGG | - | chr6.2:21323986-21324005 | MS.gene68923:CDS | 45.0% | |
GAAGCAGTCAATCAACTTGG+AGG | - | chr6.2:21321964-21321983 | MS.gene68923:CDS | 45.0% | |
GACGGCGCCTCAATTATATT+AGG | + | chr6.2:21323573-21323592 | None:intergenic | 45.0% | |
TATGGGACTTGATGCTGCAA+AGG | - | chr6.2:21323752-21323771 | MS.gene68923:intron | 45.0% | |
TGAGCAGCTTGAGGTATAGA+AGG | - | chr6.2:21322936-21322955 | MS.gene68923:intron | 45.0% | |
TGGCCTCAACAAACACAAGA+AGG | - | chr6.2:21323858-21323877 | MS.gene68923:intron | 45.0% | |
TTAAGGATGCACATGCAAGG+AGG | - | chr6.2:21321850-21321869 | MS.gene68923:CDS | 45.0% | |
! | GCTGATGTTGCTGATGATGA+TGG | + | chr6.2:21321807-21321826 | None:intergenic | 45.0% |
! | GTCCTTTCTGGTACTTCATC+CGG | + | chr6.2:21324160-21324179 | None:intergenic | 45.0% |
!! | GCTTTAAGGATGCACATGCA+AGG | - | chr6.2:21321847-21321866 | MS.gene68923:CDS | 45.0% |
!! | AAAACTAAAAATTATTTATA+TGG | + | chr6.2:21322323-21322342 | None:intergenic | 5.0% |
!!! | ATATAAATAATTTTTAGTTT+TGG | - | chr6.2:21322322-21322341 | MS.gene68923:CDS | 5.0% |
CACATGCAAGGAGGAGGAAA+TGG | - | chr6.2:21321859-21321878 | MS.gene68923:CDS | 50.0% | |
GTCCTATAGGGGCCAAATTG+AGG | + | chr6.2:21323027-21323046 | None:intergenic | 50.0% | |
! | GACCGGATGAAGTACCAGAA+AGG | - | chr6.2:21324155-21324174 | MS.gene68923:intron | 50.0% |
AGGATGCACATGCAAGGAGG+AGG | - | chr6.2:21321853-21321872 | MS.gene68923:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 21321796 | 21324453 | 21321796 | ID=MS.gene68923 |
chr6.2 | mRNA | 21321796 | 21324453 | 21321796 | ID=MS.gene68923.t1;Parent=MS.gene68923 |
chr6.2 | exon | 21324255 | 21324453 | 21324255 | ID=MS.gene68923.t1.exon1;Parent=MS.gene68923.t1 |
chr6.2 | CDS | 21324255 | 21324453 | 21324255 | ID=cds.MS.gene68923.t1;Parent=MS.gene68923.t1 |
chr6.2 | exon | 21323975 | 21324051 | 21323975 | ID=MS.gene68923.t1.exon2;Parent=MS.gene68923.t1 |
chr6.2 | CDS | 21323975 | 21324051 | 21323975 | ID=cds.MS.gene68923.t1;Parent=MS.gene68923.t1 |
chr6.2 | exon | 21323700 | 21323757 | 21323700 | ID=MS.gene68923.t1.exon3;Parent=MS.gene68923.t1 |
chr6.2 | CDS | 21323700 | 21323757 | 21323700 | ID=cds.MS.gene68923.t1;Parent=MS.gene68923.t1 |
chr6.2 | exon | 21323475 | 21323550 | 21323475 | ID=MS.gene68923.t1.exon4;Parent=MS.gene68923.t1 |
chr6.2 | CDS | 21323475 | 21323550 | 21323475 | ID=cds.MS.gene68923.t1;Parent=MS.gene68923.t1 |
chr6.2 | exon | 21323301 | 21323370 | 21323301 | ID=MS.gene68923.t1.exon5;Parent=MS.gene68923.t1 |
chr6.2 | CDS | 21323301 | 21323370 | 21323301 | ID=cds.MS.gene68923.t1;Parent=MS.gene68923.t1 |
chr6.2 | exon | 21322196 | 21322598 | 21322196 | ID=MS.gene68923.t1.exon6;Parent=MS.gene68923.t1 |
chr6.2 | CDS | 21322196 | 21322598 | 21322196 | ID=cds.MS.gene68923.t1;Parent=MS.gene68923.t1 |
chr6.2 | exon | 21321796 | 21322094 | 21321796 | ID=MS.gene68923.t1.exon7;Parent=MS.gene68923.t1 |
chr6.2 | CDS | 21321796 | 21322094 | 21321796 | ID=cds.MS.gene68923.t1;Parent=MS.gene68923.t1 |
Gene Sequence |
Protein sequence |