Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051344.t1 | XP_013457206.1 | 95.8 | 452 | 17 | 2 | 1 | 451 | 1 | 451 | 1.70E-245 | 858.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051344.t1 | Q8LGI2 | 63.5 | 446 | 157 | 4 | 7 | 448 | 8 | 451 | 4.0e-171 | 602.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051344.t1 | A0A072UNF4 | 95.8 | 452 | 17 | 2 | 1 | 451 | 1 | 451 | 1.2e-245 | 858.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051344 | MS.gene052611 | 0.800542 | 1.37E-48 | -1.69E-46 |
| MS.gene051344 | MS.gene053008 | 0.809916 | 1.49E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene053166 | 0.807102 | 5.96E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene05510 | 0.800729 | 1.26E-48 | -1.69E-46 |
| MS.gene051344 | MS.gene055356 | 0.823062 | 1.70E-53 | -1.69E-46 |
| MS.gene051344 | MS.gene055358 | 0.809046 | 2.30E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene059128 | 0.807443 | 5.04E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene060322 | 0.803051 | 4.19E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene060803 | 0.813908 | 2.02E-51 | -1.69E-46 |
| MS.gene051344 | MS.gene061333 | 0.801034 | 1.09E-48 | -1.69E-46 |
| MS.gene051344 | MS.gene064070 | 0.808825 | 2.56E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene064944 | 0.811949 | 5.42E-51 | -1.69E-46 |
| MS.gene051344 | MS.gene065825 | 0.803037 | 4.22E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene066320 | 0.803147 | 4.01E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene066433 | 0.807016 | 6.21E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene06921 | 0.809976 | 1.45E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene06922 | 0.805892 | 1.07E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene07115 | 0.801672 | 8.06E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene07344 | 0.804055 | 2.60E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene074617 | 0.800869 | 1.18E-48 | -1.69E-46 |
| MS.gene051344 | MS.gene07882 | 0.801048 | 1.08E-48 | -1.69E-46 |
| MS.gene051344 | MS.gene20184 | 0.808814 | 2.57E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene26073 | 0.805186 | 1.51E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene28498 | 0.807622 | 4.62E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene29095 | 0.804255 | 2.36E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene35408 | 0.806365 | 8.52E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene35930 | 0.804352 | 2.25E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene39846 | 0.807167 | 5.77E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene45193 | 0.815319 | 9.82E-52 | -1.69E-46 |
| MS.gene051344 | MS.gene45194 | 0.823698 | 1.20E-53 | -1.69E-46 |
| MS.gene051344 | MS.gene47338 | 0.803232 | 3.85E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene47339 | 0.803338 | 3.66E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene47340 | 0.803211 | 3.88E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene48577 | 0.825094 | 5.65E-54 | -1.69E-46 |
| MS.gene051344 | MS.gene49665 | 0.823932 | 1.06E-53 | -1.69E-46 |
| MS.gene051344 | MS.gene50708 | 0.815021 | 1.14E-51 | -1.69E-46 |
| MS.gene051344 | MS.gene51459 | 0.803937 | 2.75E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene53579 | 0.811071 | 8.41E-51 | -1.69E-46 |
| MS.gene051344 | MS.gene53586 | 0.817283 | 3.57E-52 | -1.69E-46 |
| MS.gene051344 | MS.gene55219 | -0.802619 | 5.15E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene55625 | 0.816802 | 4.58E-52 | -1.69E-46 |
| MS.gene051344 | MS.gene58686 | 0.818561 | 1.84E-52 | -1.69E-46 |
| MS.gene051344 | MS.gene59948 | 0.801535 | 8.60E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene59949 | 0.818425 | 1.97E-52 | -1.69E-46 |
| MS.gene051344 | MS.gene62393 | 0.809887 | 1.51E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene64249 | 0.812388 | 4.35E-51 | -1.69E-46 |
| MS.gene051344 | MS.gene64417 | 0.815238 | 1.02E-51 | -1.69E-46 |
| MS.gene051344 | MS.gene66964 | 0.821814 | 3.31E-53 | -1.69E-46 |
| MS.gene051344 | MS.gene66969 | 0.813439 | 2.56E-51 | -1.69E-46 |
| MS.gene051344 | MS.gene68923 | 0.807806 | 4.22E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene69794 | 0.800732 | 1.26E-48 | -1.69E-46 |
| MS.gene051344 | MS.gene72203 | 0.803223 | 3.86E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene72268 | 0.818777 | 1.64E-52 | -1.69E-46 |
| MS.gene051344 | MS.gene72811 | 0.810684 | 1.02E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene74373 | 0.802742 | 4.86E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene74971 | 0.820344 | 7.21E-53 | -1.69E-46 |
| MS.gene051344 | MS.gene78247 | 0.806968 | 6.36E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene78492 | 0.800842 | 1.19E-48 | -1.69E-46 |
| MS.gene051344 | MS.gene82879 | 0.817915 | 2.57E-52 | -1.69E-46 |
| MS.gene051344 | MS.gene86844 | 0.808292 | 3.33E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene88243 | 0.812377 | 4.37E-51 | -1.69E-46 |
| MS.gene051344 | MS.gene91807 | 0.803385 | 3.57E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene91809 | 0.817183 | 3.76E-52 | -1.69E-46 |
| MS.gene051344 | MS.gene92383 | 0.809838 | 1.55E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene93888 | 0.815997 | 6.94E-52 | -1.69E-46 |
| MS.gene051344 | MS.gene98633 | 0.814985 | 1.17E-51 | -1.69E-46 |
| MS.gene051344 | MS.gene98828 | 0.80897 | 2.38E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051344.t1 | MTR_4g094268 | 95.354 | 452 | 19 | 2 | 1 | 451 | 1 | 451 | 0.0 | 857 |
| MS.gene051344.t1 | MTR_7g011890 | 69.955 | 446 | 131 | 2 | 8 | 451 | 6 | 450 | 0.0 | 639 |
| MS.gene051344.t1 | MTR_7g011890 | 66.972 | 327 | 107 | 1 | 125 | 451 | 1 | 326 | 1.75e-156 | 446 |
| MS.gene051344.t1 | MTR_5g064800 | 75.000 | 56 | 14 | 0 | 327 | 382 | 2 | 57 | 7.43e-19 | 88.6 |
| MS.gene051344.t1 | MTR_5g064760 | 45.192 | 104 | 49 | 3 | 356 | 451 | 6 | 109 | 5.64e-15 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051344.t1 | AT5G39410 | 62.780 | 446 | 160 | 4 | 7 | 448 | 8 | 451 | 0.0 | 595 |
Find 123 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGGGTTGTTGGTAATTT+TGG | 0.124033 | 4.1:+19500147 | MS.gene051344:CDS |
| CACGGGTGAGGCTGAGTTTA+TGG | 0.201773 | 4.1:+19499948 | MS.gene051344:CDS |
| CCTTTGGTAGATTATTTCTT+TGG | 0.206599 | 4.1:-19502217 | None:intergenic |
| TACACTCCAGGTATTGTATT+TGG | 0.232865 | 4.1:+19502248 | MS.gene051344:CDS |
| TTCAATCCTGGGAGACCTTC+GGG | 0.248602 | 4.1:-19501786 | None:intergenic |
| TTTATGGATCGGGTCGAAAT+TGG | 0.259931 | 4.1:+19499964 | MS.gene051344:CDS |
| TGGCGGGTGTTTGCCGAATA+AGG | 0.279844 | 4.1:+19500095 | MS.gene051344:CDS |
| GTGGTTACATAACCCATTTC+GGG | 0.281740 | 4.1:-19502155 | None:intergenic |
| CGTGGTTACATAACCCATTT+CGG | 0.283669 | 4.1:-19502156 | None:intergenic |
| GCCAGAAGAAAATTGGTCTT+TGG | 0.291168 | 4.1:+19501697 | MS.gene051344:CDS |
| AAGAATAACCGGACCCGAAA+TGG | 0.296973 | 4.1:+19502142 | MS.gene051344:CDS |
| TTGAGAAAAGGAAAGTCTTT+TGG | 0.302035 | 4.1:+19501826 | MS.gene051344:CDS |
| CTTTGATTGTTTCTGCTTGT+GGG | 0.311246 | 4.1:+19500016 | MS.gene051344:CDS |
| CGCTCTATTATTTCTCCTTT+AGG | 0.321774 | 4.1:-19501675 | None:intergenic |
| CAAGAAAGACTTCAACAAAA+TGG | 0.339818 | 4.1:+19502284 | MS.gene051344:CDS |
| AGATGCCCATTGAAGGGTTT+GGG | 0.350625 | 4.1:-19499749 | None:intergenic |
| CCAGAAGAAAATTGGTCTTT+GGG | 0.352825 | 4.1:+19501698 | MS.gene051344:CDS |
| ATTCAATCCTGGGAGACCTT+CGG | 0.363455 | 4.1:-19501787 | None:intergenic |
| TGAATTCATACCACAGGCTT+TGG | 0.370631 | 4.1:-19500249 | None:intergenic |
| GCACACTGAATTAGAATTAT+CGG | 0.376740 | 4.1:-19502179 | None:intergenic |
| TCAGCAGATGCAACCGTTGT+TGG | 0.377487 | 4.1:+19501735 | MS.gene051344:CDS |
| AAATTCGACATCGTAATCTT+AGG | 0.380578 | 4.1:+19499619 | MS.gene051344:CDS |
| TGACTCTGTTCCTGCTGAGA+TGG | 0.386274 | 4.1:+19500041 | MS.gene051344:CDS |
| GAGATGCCCATTGAAGGGTT+TGG | 0.390923 | 4.1:-19499750 | None:intergenic |
| ATAGAGCGCCAGAAGAAAAT+TGG | 0.391125 | 4.1:+19501690 | MS.gene051344:CDS |
| CGAAACGGGTTGTGATTACT+TGG | 0.394903 | 4.1:+19499921 | MS.gene051344:CDS |
| CTTGTTATAACTTCCATGTC+AGG | 0.395322 | 4.1:-19502122 | None:intergenic |
| GACTCTGTTCCTGCTGAGAT+GGG | 0.395699 | 4.1:+19500042 | MS.gene051344:CDS |
| TACATAACCCATTTCGGGTC+CGG | 0.396081 | 4.1:-19502150 | None:intergenic |
| CATGCATGTTTGTAGATTCC+AGG | 0.404839 | 4.1:+19501645 | MS.gene051344:intron |
| GTTGTGTCGGCGATGAGAAT+GGG | 0.410687 | 4.1:-19499796 | None:intergenic |
| TCTTTGATTGTTTCTGCTTG+TGG | 0.413283 | 4.1:+19500015 | MS.gene051344:CDS |
| CGTCGCTGCGTGTGTCGAAA+CGG | 0.417999 | 4.1:+19499906 | MS.gene051344:CDS |
| TTAGGCTCAAAATCTCTGTT+AGG | 0.418382 | 4.1:+19501882 | MS.gene051344:CDS |
| GGGATTGAAGGTGGTGGGTC+GGG | 0.422506 | 4.1:-19499775 | None:intergenic |
| GTCGCTGCGTGTGTCGAAAC+GGG | 0.423412 | 4.1:+19499907 | MS.gene051344:CDS |
| AACTAACCCAAACCCTTCAA+TGG | 0.427595 | 4.1:+19499743 | MS.gene051344:CDS |
| ATCGTAATCTTAGGAGCATC+AGG | 0.427703 | 4.1:+19499628 | MS.gene051344:CDS |
| TCAGGACTCTCATTCAATCC+TGG | 0.430091 | 4.1:-19501798 | None:intergenic |
| GAGTGTTGAGTCGGAGAAGA+GGG | 0.441939 | 4.1:+19500131 | MS.gene051344:CDS |
| GTGTTTGCCGAATAAGGTTG+AGG | 0.442784 | 4.1:+19500101 | MS.gene051344:CDS |
| GAAGTTATAACAAGAATAAC+CGG | 0.445127 | 4.1:+19502131 | MS.gene051344:CDS |
| CCTAGGCGGTTTCAGCAAGC+AGG | 0.449503 | 4.1:+19502001 | MS.gene051344:CDS |
| TTTCAGCAAGCAGGGTCCTT+CGG | 0.457039 | 4.1:+19502010 | MS.gene051344:CDS |
| TCTGTGAAGCCAGTACATTT+TGG | 0.458134 | 4.1:+19501852 | MS.gene051344:CDS |
| GTCCTGAGACTGTTGAGAAA+AGG | 0.464392 | 4.1:+19501814 | MS.gene051344:CDS |
| CGGGTCGAGATGCCCATTGA+AGG | 0.469471 | 4.1:-19499756 | None:intergenic |
| GGTTGTGTCGGCGATGAGAA+TGG | 0.470565 | 4.1:-19499797 | None:intergenic |
| GAAGTACCAGTCTTGGAAGA+TGG | 0.471212 | 4.1:+19501949 | MS.gene051344:CDS |
| TGATGGGTTTCGACCAGCTA+TGG | 0.473757 | 4.1:-19499719 | None:intergenic |
| GAGTCGGAGAAGAGGGTTGT+TGG | 0.475801 | 4.1:+19500138 | MS.gene051344:CDS |
| TTAGGAGCATCAGGTTTCAC+TGG | 0.477063 | 4.1:+19499637 | MS.gene051344:CDS |
| AGAATAACCGGACCCGAAAT+GGG | 0.479736 | 4.1:+19502143 | MS.gene051344:CDS |
| GGAAAGTGGGTCGGTTGTGT+CGG | 0.483935 | 4.1:-19499809 | None:intergenic |
| CAGAGTGAACGGAGGGAAAG+TGG | 0.486453 | 4.1:-19499823 | None:intergenic |
| GGGGATTGAAGGTGGTGGGT+CGG | 0.486863 | 4.1:-19499776 | None:intergenic |
| GGGTCCTTCGGAAGAGGAAG+TGG | 0.489003 | 4.1:+19502022 | MS.gene051344:CDS |
| TTGAAGAAGCAGTGGGTTGG+CGG | 0.494059 | 4.1:+19500078 | MS.gene051344:CDS |
| CAAAGAAATAATCTACCAAA+GGG | 0.494856 | 4.1:+19502218 | MS.gene051344:CDS |
| TCATTCAAGATGTGGTTTGT+CGG | 0.498252 | 4.1:+19502053 | MS.gene051344:CDS |
| ATTATTTCTCCTTTAGGAAG+GGG | 0.500413 | 4.1:-19501669 | None:intergenic |
| CAGGACTCTCATTCAATCCT+GGG | 0.503685 | 4.1:-19501797 | None:intergenic |
| GCGATGAGAATGGGGATTGA+AGG | 0.504387 | 4.1:-19499787 | None:intergenic |
| CTATTATTTCTCCTTTAGGA+AGG | 0.505379 | 4.1:-19501671 | None:intergenic |
| TTGTGATTACTTGGATATCA+CGG | 0.507937 | 4.1:+19499930 | MS.gene051344:CDS |
| AACTTCACACCAAAATGTAC+TGG | 0.508366 | 4.1:-19501861 | None:intergenic |
| TGAAGAAGCAGTGGGTTGGC+GGG | 0.508528 | 4.1:+19500079 | MS.gene051344:CDS |
| ACTAACCCAAACCCTTCAAT+GGG | 0.511384 | 4.1:+19499744 | MS.gene051344:CDS |
| TGAGGCTGAGTTTATGGATC+GGG | 0.511385 | 4.1:+19499954 | MS.gene051344:CDS |
| CAAGCAGGGTCCTTCGGAAG+AGG | 0.511954 | 4.1:+19502016 | MS.gene051344:CDS |
| CTTAACTCCATAGCCATAGC+TGG | 0.517172 | 4.1:+19499706 | MS.gene051344:CDS |
| GGAGTGTAAACTCCTCCCTT+TGG | 0.517824 | 4.1:-19502233 | None:intergenic |
| TGTTTGCCGAATAAGGTTGA+GGG | 0.519475 | 4.1:+19500102 | MS.gene051344:CDS |
| AAGATGTGGTTTGTCGGACA+TGG | 0.521353 | 4.1:+19502059 | MS.gene051344:CDS |
| ATTCCAGGTCCCCTTCCTAA+AGG | 0.524469 | 4.1:+19501660 | MS.gene051344:CDS |
| AGTTAAGATTATTGTTGTTG+AGG | 0.524793 | 4.1:-19499690 | None:intergenic |
| TGAACAAGATGAGACAAAGA+AGG | 0.526154 | 4.1:+19500205 | MS.gene051344:CDS |
| CTTTCCACTTCCTCTTCCGA+AGG | 0.526470 | 4.1:-19502026 | None:intergenic |
| CTTTCGTCTCCACGGCGAGC+CGG | 0.527050 | 4.1:+19499882 | MS.gene051344:CDS |
| GTGAGGCTGAGTTTATGGAT+CGG | 0.532862 | 4.1:+19499953 | MS.gene051344:CDS |
| GAAAACCCCGAAGGTCTCCC+AGG | 0.532877 | 4.1:+19501780 | MS.gene051344:CDS |
| TGAGTGTTGAGTCGGAGAAG+AGG | 0.534648 | 4.1:+19500130 | MS.gene051344:CDS |
| TCTCCTTTAGGAAGGGGACC+TGG | 0.538601 | 4.1:-19501663 | None:intergenic |
| ATGAGAATGGGGATTGAAGG+TGG | 0.541747 | 4.1:-19499784 | None:intergenic |
| GGCTCGCCGTGGAGACGAAA+GGG | 0.546320 | 4.1:-19499880 | None:intergenic |
| TCGACACACGCAGCGACGAC+CGG | 0.546474 | 4.1:-19499901 | None:intergenic |
| AAGAAGCCATCTTCCAAGAC+TGG | 0.547676 | 4.1:-19501955 | None:intergenic |
| TATTATTTCTCCTTTAGGAA+GGG | 0.547977 | 4.1:-19501670 | None:intergenic |
| CATTTGAAGAAGCAGTGGGT+TGG | 0.555764 | 4.1:+19500075 | MS.gene051344:CDS |
| TGTGATTACTTGGATATCAC+GGG | 0.555914 | 4.1:+19499931 | MS.gene051344:CDS |
| GGGTCGAGATGCCCATTGAA+GGG | 0.559377 | 4.1:-19499755 | None:intergenic |
| AACAACAAACCCATCTCAGC+AGG | 0.566846 | 4.1:-19500051 | None:intergenic |
| GTTTCGACCAGCTATGGCTA+TGG | 0.566852 | 4.1:-19499713 | None:intergenic |
| AAGGGAGGAGTTTACACTCC+AGG | 0.581410 | 4.1:+19502236 | MS.gene051344:CDS |
| CCAAAGAAATAATCTACCAA+AGG | 0.581842 | 4.1:+19502217 | MS.gene051344:CDS |
| AGAATGGGGATTGAAGGTGG+TGG | 0.581844 | 4.1:-19499781 | None:intergenic |
| TGTTTCATTTGAAGAAGCAG+TGG | 0.581915 | 4.1:+19500070 | MS.gene051344:CDS |
| CGGCTCGCCGTGGAGACGAA+AGG | 0.582195 | 4.1:-19499881 | None:intergenic |
| GTTGAACCAAATACAATACC+TGG | 0.587696 | 4.1:-19502254 | None:intergenic |
| GACGCAGTTGAGTATGAGAC+GGG | 0.591339 | 4.1:-19499854 | None:intergenic |
| AAAGTGCTTCATTCAAGATG+TGG | 0.594396 | 4.1:+19502045 | MS.gene051344:CDS |
| AGTAGACTCAAAACCTGACA+TGG | 0.594396 | 4.1:+19502109 | MS.gene051344:CDS |
| ACAACGGTTGCATCTGCTGA+AGG | 0.595333 | 4.1:-19501732 | None:intergenic |
| CAGAAGAAAATTGGTCTTTG+GGG | 0.596226 | 4.1:+19501699 | MS.gene051344:CDS |
| GAACAAGATGAGACAAAGAA+GGG | 0.596590 | 4.1:+19500206 | MS.gene051344:CDS |
| AGAGTGAACGGAGGGAAAGT+GGG | 0.598062 | 4.1:-19499822 | None:intergenic |
| GTCGGTCCCTTTCGTCTCCA+CGG | 0.599380 | 4.1:+19499874 | MS.gene051344:CDS |
| CCTGCTTGCTGAAACCGCCT+AGG | 0.601839 | 4.1:-19502001 | None:intergenic |
| TTTGAGACAGAGTGAACGGA+GGG | 0.605712 | 4.1:-19499830 | None:intergenic |
| CAGCGACGACCGGCTCGCCG+TGG | 0.607278 | 4.1:-19499891 | None:intergenic |
| TTACTTGGATATCACGGGTG+AGG | 0.611164 | 4.1:+19499936 | MS.gene051344:CDS |
| GAATGGGGATTGAAGGTGGT+GGG | 0.614138 | 4.1:-19499780 | None:intergenic |
| GTTTCATTTGAAGAAGCAGT+GGG | 0.619860 | 4.1:+19500071 | MS.gene051344:CDS |
| TTGTGTCGGCGATGAGAATG+GGG | 0.627937 | 4.1:-19499795 | None:intergenic |
| TCAATCCTGGGAGACCTTCG+GGG | 0.629203 | 4.1:-19501785 | None:intergenic |
| AGAAATAATCTACCAAAGGG+AGG | 0.636933 | 4.1:+19502221 | MS.gene051344:CDS |
| TGAACGGAGGGAAAGTGGGT+CGG | 0.643065 | 4.1:-19499818 | None:intergenic |
| CTAGGCGGTTTCAGCAAGCA+GGG | 0.647197 | 4.1:+19502002 | MS.gene051344:CDS |
| GTTCTAACTGAAAACCCCGA+AGG | 0.659305 | 4.1:+19501771 | MS.gene051344:CDS |
| CGACGCAGTTGAGTATGAGA+CGG | 0.662654 | 4.1:-19499855 | None:intergenic |
| CTGAATTAGAATTATCGGCG+TGG | 0.677417 | 4.1:-19502174 | None:intergenic |
| CGTCTCATACTCAACTGCGT+CGG | 0.698883 | 4.1:+19499856 | MS.gene051344:CDS |
| AATCAAAAGACCAAAGCCTG+TGG | 0.727889 | 4.1:+19500239 | MS.gene051344:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTATATGAAATATGTTAAA+AGG | - | chr4.1:19501601-19501620 | None:intergenic | 15.0% |
| !! | TTATAAAATAGATTCTCATT+TGG | + | chr4.1:19500962-19500981 | MS.gene051344:intron | 15.0% |
| !!! | TAGACAGATTATTATTATTT+TGG | + | chr4.1:19500987-19501006 | MS.gene051344:intron | 15.0% |
| !!! | TATTTAGAAGTATAATAAAG+TGG | + | chr4.1:19500569-19500588 | MS.gene051344:intron | 15.0% |
| !! | AAAAGTTATAAAGGATTGTT+AGG | + | chr4.1:19500836-19500855 | MS.gene051344:intron | 20.0% |
| !! | ACACTCAAAAATTAGTAAAA+GGG | + | chr4.1:19500906-19500925 | MS.gene051344:intron | 20.0% |
| !! | ATGCATGATTCATTAAAATT+GGG | - | chr4.1:19501632-19501651 | None:intergenic | 20.0% |
| !! | TAAGCAATCAAAAGTTATAA+AGG | + | chr4.1:19500827-19500846 | MS.gene051344:intron | 20.0% |
| !! | TACACTCAAAAATTAGTAAA+AGG | + | chr4.1:19500905-19500924 | MS.gene051344:intron | 20.0% |
| !! | TCTTTAATATGCATGTTATA+TGG | - | chr4.1:19500777-19500796 | None:intergenic | 20.0% |
| ! | ATACATTCAATCAAATCATG+AGG | - | chr4.1:19500604-19500623 | None:intergenic | 25.0% |
| ! | CAAAGAAATAATCTACCAAA+GGG | + | chr4.1:19502218-19502237 | MS.gene051344:CDS | 25.0% |
| ! | CATGCATGATTCATTAAAAT+TGG | - | chr4.1:19501633-19501652 | None:intergenic | 25.0% |
| ! | GAAGTTATAACAAGAATAAC+CGG | + | chr4.1:19502131-19502150 | MS.gene051344:CDS | 25.0% |
| ! | GGATTTAATTAAATTACTCG+AGG | - | chr4.1:19501408-19501427 | None:intergenic | 25.0% |
| ! | GTCTTCATATAATCTTCAAA+GGG | + | chr4.1:19501099-19501118 | MS.gene051344:intron | 25.0% |
| ! | TAACCACTATTTGACTATAA+TGG | - | chr4.1:19501371-19501390 | None:intergenic | 25.0% |
| ! | TAATATTGAATTCATACCAC+AGG | - | chr4.1:19500258-19500277 | None:intergenic | 25.0% |
| ! | TACTTTATAGGTAGTAACTA+AGG | + | chr4.1:19500430-19500449 | MS.gene051344:intron | 25.0% |
| ! | TGTCTGTTTATGTACTTTAT+AGG | + | chr4.1:19500418-19500437 | MS.gene051344:intron | 25.0% |
| !! | AGTTAAGATTATTGTTGTTG+AGG | - | chr4.1:19499693-19499712 | None:intergenic | 25.0% |
| !! | CATGAAAAAAGTGTAAAGAA+TGG | + | chr4.1:19499991-19500010 | MS.gene051344:CDS | 25.0% |
| !! | GTTTTCACTAAATCTTTGAT+TGG | + | chr4.1:19501055-19501074 | MS.gene051344:intron | 25.0% |
| !! | TATTATTTCTCCTTTAGGAA+GGG | - | chr4.1:19501673-19501692 | None:intergenic | 25.0% |
| !!! | ATCTGCATACTGTTTATTTT+AGG | + | chr4.1:19501274-19501293 | MS.gene051344:intron | 25.0% |
| AAAAAACCCTCAACCTTATT+CGG | - | chr4.1:19500111-19500130 | None:intergenic | 30.0% | |
| AAATTCGACATCGTAATCTT+AGG | + | chr4.1:19499619-19499638 | MS.gene051344:CDS | 30.0% | |
| AAGATTGAGCAATTCTTGAA+TGG | + | chr4.1:19500793-19500812 | MS.gene051344:intron | 30.0% | |
| AAGGGAAAAAAACATCACAA+CGG | + | chr4.1:19500924-19500943 | MS.gene051344:intron | 30.0% | |
| ACACCATCAATCTTAAATGT+CGG | - | chr4.1:19500301-19500320 | None:intergenic | 30.0% | |
| ACTCCATTATAGTCAAATAG+TGG | + | chr4.1:19501365-19501384 | MS.gene051344:intron | 30.0% | |
| ACTCGATTGAATTTAGTGTA+GGG | + | chr4.1:19500456-19500475 | MS.gene051344:intron | 30.0% | |
| AGATTGAGCAATTCTTGAAT+GGG | + | chr4.1:19500794-19500813 | MS.gene051344:intron | 30.0% | |
| AGTTATAAAGGATTGTTAGG+AGG | + | chr4.1:19500839-19500858 | MS.gene051344:intron | 30.0% | |
| ATACCTGCGAATTATTCTTA+GGG | - | chr4.1:19501152-19501171 | None:intergenic | 30.0% | |
| CAAGAAAGACTTCAACAAAA+TGG | + | chr4.1:19502284-19502303 | MS.gene051344:CDS | 30.0% | |
| CAGGAATGAAGAATACTATA+TGG | - | chr4.1:19501214-19501233 | None:intergenic | 30.0% | |
| CCAAAGAAATAATCTACCAA+AGG | + | chr4.1:19502217-19502236 | MS.gene051344:CDS | 30.0% | |
| GCACACTGAATTAGAATTAT+CGG | - | chr4.1:19502182-19502201 | None:intergenic | 30.0% | |
| GGTCTTCATATAATCTTCAA+AGG | + | chr4.1:19501098-19501117 | MS.gene051344:intron | 30.0% | |
| TACTCGATTGAATTTAGTGT+AGG | + | chr4.1:19500455-19500474 | MS.gene051344:intron | 30.0% | |
| TATACCTGCGAATTATTCTT+AGG | - | chr4.1:19501153-19501172 | None:intergenic | 30.0% | |
| TTAGTACTAATAGCATATCG+CGG | - | chr4.1:19501439-19501458 | None:intergenic | 30.0% | |
| TTCAATCAAATCATGAGGTA+AGG | - | chr4.1:19500599-19500618 | None:intergenic | 30.0% | |
| TTGAAGATTATATGAAGACC+AGG | - | chr4.1:19501098-19501117 | None:intergenic | 30.0% | |
| TTGTGATTACTTGGATATCA+CGG | + | chr4.1:19499930-19499949 | MS.gene051344:CDS | 30.0% | |
| ! | ATTATTTCTCCTTTAGGAAG+GGG | - | chr4.1:19501672-19501691 | None:intergenic | 30.0% |
| ! | ATTTTCGCATACATCACTTT+TGG | + | chr4.1:19501906-19501925 | MS.gene051344:CDS | 30.0% |
| ! | CCTTTGGTAGATTATTTCTT+TGG | - | chr4.1:19502220-19502239 | None:intergenic | 30.0% |
| ! | CGAAAATGTTTTTCCAACAA+CGG | - | chr4.1:19501751-19501770 | None:intergenic | 30.0% |
| ! | CGTTGTTGGAAAAACATTTT+CGG | + | chr4.1:19501749-19501768 | MS.gene051344:CDS | 30.0% |
| ! | CTATTATTTCTCCTTTAGGA+AGG | - | chr4.1:19501674-19501693 | None:intergenic | 30.0% |
| ! | GTTGACTCTATTAATTGTCA+TGG | + | chr4.1:19501316-19501335 | MS.gene051344:intron | 30.0% |
| ! | TTGAGAAAAGGAAAGTCTTT+TGG | + | chr4.1:19501826-19501845 | MS.gene051344:CDS | 30.0% |
| ! | TTGTTCGATGAGTTTTTCTA+TGG | + | chr4.1:19500724-19500743 | MS.gene051344:intron | 30.0% |
| !! | AATATTACTGCTAGCTTTGT+CGG | + | chr4.1:19501010-19501029 | MS.gene051344:intron | 30.0% |
| !! | GGAATAATCCTAGTTCTTTT+TGG | + | chr4.1:19501927-19501946 | MS.gene051344:CDS | 30.0% |
| !!! | GATGTCGAATTTTGTTTCTA+CGG | - | chr4.1:19499611-19499630 | None:intergenic | 30.0% |
| !!! | TATCCTTCAATTTTTAGCCT+AGG | + | chr4.1:19501984-19502003 | MS.gene051344:CDS | 30.0% |
| AAACTCATCGAACAACAAAC+AGG | - | chr4.1:19500719-19500738 | None:intergenic | 35.0% | |
| AACTCATCGAACAACAAACA+GGG | - | chr4.1:19500718-19500737 | None:intergenic | 35.0% | |
| AACTTCACACCAAAATGTAC+TGG | - | chr4.1:19501864-19501883 | None:intergenic | 35.0% | |
| AGAAATAATCTACCAAAGGG+AGG | + | chr4.1:19502221-19502240 | MS.gene051344:CDS | 35.0% | |
| AGAGATTGTAGTATAGTGTC+AGG | - | chr4.1:19501233-19501252 | None:intergenic | 35.0% | |
| CTCGATTGAATTTAGTGTAG+GGG | + | chr4.1:19500457-19500476 | MS.gene051344:intron | 35.0% | |
| GAACAAGATGAGACAAAGAA+GGG | + | chr4.1:19500206-19500225 | MS.gene051344:CDS | 35.0% | |
| GACTCTATTAATTGTCATGG+TGG | + | chr4.1:19501319-19501338 | MS.gene051344:intron | 35.0% | |
| GTCTTCATATTTAACAAGCC+TGG | + | chr4.1:19501077-19501096 | MS.gene051344:intron | 35.0% | |
| GTTGAACCAAATACAATACC+TGG | - | chr4.1:19502257-19502276 | None:intergenic | 35.0% | |
| GTTTCATTTGAAGAAGCAGT+GGG | + | chr4.1:19500071-19500090 | MS.gene051344:CDS | 35.0% | |
| TGAACAAGATGAGACAAAGA+AGG | + | chr4.1:19500205-19500224 | MS.gene051344:CDS | 35.0% | |
| TGGTACTTCCAAAAAGAACT+AGG | - | chr4.1:19501938-19501957 | None:intergenic | 35.0% | |
| TGTGATTACTTGGATATCAC+GGG | + | chr4.1:19499931-19499950 | MS.gene051344:CDS | 35.0% | |
| TGTTTCATTTGAAGAAGCAG+TGG | + | chr4.1:19500070-19500089 | MS.gene051344:CDS | 35.0% | |
| TTAGGCTCAAAATCTCTGTT+AGG | + | chr4.1:19501882-19501901 | MS.gene051344:CDS | 35.0% | |
| TTGAATGTAACCACATACGT+CGG | - | chr4.1:19500372-19500391 | None:intergenic | 35.0% | |
| ! | AAAGTGCTTCATTCAAGATG+TGG | + | chr4.1:19502045-19502064 | MS.gene051344:CDS | 35.0% |
| ! | CGCTCTATTATTTCTCCTTT+AGG | - | chr4.1:19501678-19501697 | None:intergenic | 35.0% |
| ! | CTTGTTATAACTTCCATGTC+AGG | - | chr4.1:19502125-19502144 | None:intergenic | 35.0% |
| ! | TACACTCCAGGTATTGTATT+TGG | + | chr4.1:19502248-19502267 | MS.gene051344:CDS | 35.0% |
| ! | TCATTCAAGATGTGGTTTGT+CGG | + | chr4.1:19502053-19502072 | MS.gene051344:CDS | 35.0% |
| !! | CAGAAGAAAATTGGTCTTTG+GGG | + | chr4.1:19501699-19501718 | MS.gene051344:CDS | 35.0% |
| !! | CCAGAAGAAAATTGGTCTTT+GGG | + | chr4.1:19501698-19501717 | MS.gene051344:CDS | 35.0% |
| !! | CTTTGATTGTTTCTGCTTGT+GGG | + | chr4.1:19500016-19500035 | MS.gene051344:CDS | 35.0% |
| !! | GTACATTTTGGTGTGAAGTT+AGG | + | chr4.1:19501864-19501883 | MS.gene051344:CDS | 35.0% |
| !! | TCTTTGATTGTTTCTGCTTG+TGG | + | chr4.1:19500015-19500034 | MS.gene051344:CDS | 35.0% |
| !!! | AAGAGGGTTGTTGGTAATTT+TGG | + | chr4.1:19500147-19500166 | MS.gene051344:CDS | 35.0% |
| AACTAACCCAAACCCTTCAA+TGG | + | chr4.1:19499743-19499762 | MS.gene051344:CDS | 40.0% | |
| AATCAAAAGACCAAAGCCTG+TGG | + | chr4.1:19500239-19500258 | MS.gene051344:CDS | 40.0% | |
| ACACCCTAAGAATAATTCGC+AGG | + | chr4.1:19501146-19501165 | MS.gene051344:intron | 40.0% | |
| ACTAACCCAAACCCTTCAAT+GGG | + | chr4.1:19499744-19499763 | MS.gene051344:CDS | 40.0% | |
| ACTCATCGAACAACAAACAG+GGG | - | chr4.1:19500717-19500736 | None:intergenic | 40.0% | |
| ACTGCATATGGAAGTGAAGA+TGG | + | chr4.1:19501174-19501193 | MS.gene051344:intron | 40.0% | |
| AGTAGACTCAAAACCTGACA+TGG | + | chr4.1:19502109-19502128 | MS.gene051344:CDS | 40.0% | |
| ATAGCATATCGCGGAACAAT+AGG | - | chr4.1:19501430-19501449 | None:intergenic | 40.0% | |
| ATTGTTAGGAGGCTTCTATC+AGG | + | chr4.1:19500850-19500869 | MS.gene051344:intron | 40.0% | |
| CATGCATGTTTGTAGATTCC+AGG | + | chr4.1:19501645-19501664 | MS.gene051344:intron | 40.0% | |
| CGTGGTTACATAACCCATTT+CGG | - | chr4.1:19502159-19502178 | None:intergenic | 40.0% | |
| CTGAATTAGAATTATCGGCG+TGG | - | chr4.1:19502177-19502196 | None:intergenic | 40.0% | |
| GGAAAAAAACATCACAACGG+TGG | + | chr4.1:19500927-19500946 | MS.gene051344:intron | 40.0% | |
| GTGGTTACATAACCCATTTC+GGG | - | chr4.1:19502158-19502177 | None:intergenic | 40.0% | |
| GTGTTGTCAAATAGCTCCTA+TGG | + | chr4.1:19501459-19501478 | MS.gene051344:intron | 40.0% | |
| TAGCATATCGCGGAACAATA+GGG | - | chr4.1:19501429-19501448 | None:intergenic | 40.0% | |
| TCGCAGGTATAAACTGCATA+TGG | + | chr4.1:19501162-19501181 | MS.gene051344:intron | 40.0% | |
| TGAATTCATACCACAGGCTT+TGG | - | chr4.1:19500252-19500271 | None:intergenic | 40.0% | |
| TGTTTGCCGAATAAGGTTGA+GGG | + | chr4.1:19500102-19500121 | MS.gene051344:CDS | 40.0% | |
| TTATTCTTAGGGTGTGACGA+TGG | - | chr4.1:19501141-19501160 | None:intergenic | 40.0% | |
| TTGTCAAATAGCTCCTATGG+CGG | + | chr4.1:19501462-19501481 | MS.gene051344:intron | 40.0% | |
| TTTATGGATCGGGTCGAAAT+TGG | + | chr4.1:19499964-19499983 | MS.gene051344:CDS | 40.0% | |
| ! | ATAGAGCGCCAGAAGAAAAT+TGG | + | chr4.1:19501690-19501709 | MS.gene051344:CDS | 40.0% |
| ! | CCCAAAGACCAATTTTCTTC+TGG | - | chr4.1:19501701-19501720 | None:intergenic | 40.0% |
| ! | GCACCGACATTTAAGATTGA+TGG | + | chr4.1:19500295-19500314 | MS.gene051344:intron | 40.0% |
| ! | TCTGTGAAGCCAGTACATTT+TGG | + | chr4.1:19501852-19501871 | MS.gene051344:CDS | 40.0% |
| ! | TTCCTTTTCTCAACAGTCTC+AGG | - | chr4.1:19501819-19501838 | None:intergenic | 40.0% |
| !! | ATCGTAATCTTAGGAGCATC+AGG | + | chr4.1:19499628-19499647 | MS.gene051344:CDS | 40.0% |
| !! | GCCAGAAGAAAATTGGTCTT+TGG | + | chr4.1:19501697-19501716 | MS.gene051344:CDS | 40.0% |
| !!! | AGGGTTTGGGTTAGTTTTGA+TGG | - | chr4.1:19499739-19499758 | None:intergenic | 40.0% |
| !!! | CCTTCAATTTTTAGCCTAGG+CGG | + | chr4.1:19501987-19502006 | MS.gene051344:CDS | 40.0% |
| !!! | CTTTTTGGAAGTACCAGTCT+TGG | + | chr4.1:19501942-19501961 | MS.gene051344:CDS | 40.0% |
| !!! | GGGTTTGGGTTAGTTTTGAT+GGG | - | chr4.1:19499738-19499757 | None:intergenic | 40.0% |
| !!! | GGGTTTTTTGAGTGTTGAGT+CGG | + | chr4.1:19500122-19500141 | MS.gene051344:CDS | 40.0% |
| AACAACAAACCCATCTCAGC+AGG | - | chr4.1:19500054-19500073 | None:intergenic | 45.0% | |
| AAGAAGCCATCTTCCAAGAC+TGG | - | chr4.1:19501958-19501977 | None:intergenic | 45.0% | |
| AAGAATAACCGGACCCGAAA+TGG | + | chr4.1:19502142-19502161 | MS.gene051344:CDS | 45.0% | |
| AGAATAACCGGACCCGAAAT+GGG | + | chr4.1:19502143-19502162 | MS.gene051344:CDS | 45.0% | |
| AGATGCCCATTGAAGGGTTT+GGG | - | chr4.1:19499752-19499771 | None:intergenic | 45.0% | |
| ATGAGAATGGGGATTGAAGG+TGG | - | chr4.1:19499787-19499806 | None:intergenic | 45.0% | |
| ATTCAATCCTGGGAGACCTT+CGG | - | chr4.1:19501790-19501809 | None:intergenic | 45.0% | |
| CAGGACTCTCATTCAATCCT+GGG | - | chr4.1:19501800-19501819 | None:intergenic | 45.0% | |
| CATTTGAAGAAGCAGTGGGT+TGG | + | chr4.1:19500075-19500094 | MS.gene051344:CDS | 45.0% | |
| CCGCCTAGGCTAAAAATTGA+AGG | - | chr4.1:19501990-19502009 | None:intergenic | 45.0% | |
| CTTAACTCCATAGCCATAGC+TGG | + | chr4.1:19499706-19499725 | MS.gene051344:CDS | 45.0% | |
| GCTTCTATCAGGCAGGATTT+GGG | + | chr4.1:19500861-19500880 | MS.gene051344:intron | 45.0% | |
| GTCCTGAGACTGTTGAGAAA+AGG | + | chr4.1:19501814-19501833 | MS.gene051344:CDS | 45.0% | |
| GTGAGGCTGAGTTTATGGAT+CGG | + | chr4.1:19499953-19499972 | MS.gene051344:CDS | 45.0% | |
| GTGTTTGCCGAATAAGGTTG+AGG | + | chr4.1:19500101-19500120 | MS.gene051344:CDS | 45.0% | |
| GTTCTAACTGAAAACCCCGA+AGG | + | chr4.1:19501771-19501790 | MS.gene051344:CDS | 45.0% | |
| TATCAGGCAGGATTTGGGAA+GGG | + | chr4.1:19500866-19500885 | MS.gene051344:intron | 45.0% | |
| TCAGGACTCTCATTCAATCC+TGG | - | chr4.1:19501801-19501820 | None:intergenic | 45.0% | |
| TGAGGCTGAGTTTATGGATC+GGG | + | chr4.1:19499954-19499973 | MS.gene051344:CDS | 45.0% | |
| TGATATGATGCCGACGTATG+TGG | + | chr4.1:19500359-19500378 | MS.gene051344:intron | 45.0% | |
| TTACTTGGATATCACGGGTG+AGG | + | chr4.1:19499936-19499955 | MS.gene051344:CDS | 45.0% | |
| ! | AAGATGTGGTTTGTCGGACA+TGG | + | chr4.1:19502059-19502078 | MS.gene051344:CDS | 45.0% |
| ! | GAAGTACCAGTCTTGGAAGA+TGG | + | chr4.1:19501949-19501968 | MS.gene051344:CDS | 45.0% |
| ! | TACATAACCCATTTCGGGTC+CGG | - | chr4.1:19502153-19502172 | None:intergenic | 45.0% |
| ! | TTTGAGACAGAGTGAACGGA+GGG | - | chr4.1:19499833-19499852 | None:intergenic | 45.0% |
| !! | CGAAACGGGTTGTGATTACT+TGG | + | chr4.1:19499921-19499940 | MS.gene051344:CDS | 45.0% |
| !! | TTACTGCTAGCTTTGTCGGT+TGG | + | chr4.1:19501014-19501033 | MS.gene051344:intron | 45.0% |
| !! | TTAGGAGCATCAGGTTTCAC+TGG | + | chr4.1:19499637-19499656 | MS.gene051344:CDS | 45.0% |
| !!! | GGGTTTTGAGACAGAGTGAA+CGG | - | chr4.1:19499837-19499856 | None:intergenic | 45.0% |
| !!! | TTTTGAGACAGAGTGAACGG+AGG | - | chr4.1:19499834-19499853 | None:intergenic | 45.0% |
| AAGGGAGGAGTTTACACTCC+AGG | + | chr4.1:19502236-19502255 | MS.gene051344:CDS | 50.0% | |
| ACAACGGTTGCATCTGCTGA+AGG | - | chr4.1:19501735-19501754 | None:intergenic | 50.0% | |
| AGAATGGGGATTGAAGGTGG+TGG | - | chr4.1:19499784-19499803 | None:intergenic | 50.0% | |
| AGAGTGAACGGAGGGAAAGT+GGG | - | chr4.1:19499825-19499844 | None:intergenic | 50.0% | |
| ATTCCAGGTCCCCTTCCTAA+AGG | + | chr4.1:19501660-19501679 | MS.gene051344:CDS | 50.0% | |
| CGACGCAGTTGAGTATGAGA+CGG | - | chr4.1:19499858-19499877 | None:intergenic | 50.0% | |
| CGTCTCATACTCAACTGCGT+CGG | + | chr4.1:19499856-19499875 | MS.gene051344:CDS | 50.0% | |
| CTATCAGGCAGGATTTGGGA+AGG | + | chr4.1:19500865-19500884 | MS.gene051344:intron | 50.0% | |
| CTTTCCACTTCCTCTTCCGA+AGG | - | chr4.1:19502029-19502048 | None:intergenic | 50.0% | |
| GAATGGGGATTGAAGGTGGT+GGG | - | chr4.1:19499783-19499802 | None:intergenic | 50.0% | |
| GACGCAGTTGAGTATGAGAC+GGG | - | chr4.1:19499857-19499876 | None:intergenic | 50.0% | |
| GACTCTGTTCCTGCTGAGAT+GGG | + | chr4.1:19500042-19500061 | MS.gene051344:CDS | 50.0% | |
| GAGATGCCCATTGAAGGGTT+TGG | - | chr4.1:19499753-19499772 | None:intergenic | 50.0% | |
| GCGATGAGAATGGGGATTGA+AGG | - | chr4.1:19499790-19499809 | None:intergenic | 50.0% | |
| GGAGTGTAAACTCCTCCCTT+TGG | - | chr4.1:19502236-19502255 | None:intergenic | 50.0% | |
| GGCTTCTATCAGGCAGGATT+TGG | + | chr4.1:19500860-19500879 | MS.gene051344:intron | 50.0% | |
| GTTTCGACCAGCTATGGCTA+TGG | - | chr4.1:19499716-19499735 | None:intergenic | 50.0% | |
| TATGGCGGCAATAGCATGAG+CGG | + | chr4.1:19501477-19501496 | MS.gene051344:intron | 50.0% | |
| TCAGCAGATGCAACCGTTGT+TGG | + | chr4.1:19501735-19501754 | MS.gene051344:CDS | 50.0% | |
| TGACTCTGTTCCTGCTGAGA+TGG | + | chr4.1:19500041-19500060 | MS.gene051344:CDS | 50.0% | |
| TTAGGAGGCTTCTATCAGGC+AGG | + | chr4.1:19500854-19500873 | MS.gene051344:intron | 50.0% | |
| TTCAATCCTGGGAGACCTTC+GGG | - | chr4.1:19501789-19501808 | None:intergenic | 50.0% | |
| TTTCAGCAAGCAGGGTCCTT+CGG | + | chr4.1:19502010-19502029 | MS.gene051344:CDS | 50.0% | |
| ! | GTTGTGTCGGCGATGAGAAT+GGG | - | chr4.1:19499799-19499818 | None:intergenic | 50.0% |
| ! | TTGTGTCGGCGATGAGAATG+GGG | - | chr4.1:19499798-19499817 | None:intergenic | 50.0% |
| !! | GAGTGTTGAGTCGGAGAAGA+GGG | + | chr4.1:19500131-19500150 | MS.gene051344:CDS | 50.0% |
| !! | TGAGTGTTGAGTCGGAGAAG+AGG | + | chr4.1:19500130-19500149 | MS.gene051344:CDS | 50.0% |
| !! | TGATGGGTTTCGACCAGCTA+TGG | - | chr4.1:19499722-19499741 | None:intergenic | 50.0% |
| !! | TTGAAGAAGCAGTGGGTTGG+CGG | + | chr4.1:19500078-19500097 | MS.gene051344:CDS | 50.0% |
| CACGGGTGAGGCTGAGTTTA+TGG | + | chr4.1:19499948-19499967 | MS.gene051344:CDS | 55.0% | |
| CAGAGTGAACGGAGGGAAAG+TGG | - | chr4.1:19499826-19499845 | None:intergenic | 55.0% | |
| CTAGGCGGTTTCAGCAAGCA+GGG | + | chr4.1:19502002-19502021 | MS.gene051344:CDS | 55.0% | |
| GAGTCGGAGAAGAGGGTTGT+TGG | + | chr4.1:19500138-19500157 | MS.gene051344:CDS | 55.0% | |
| GCTCATGCTATTGCCGCCAT+AGG | - | chr4.1:19501478-19501497 | None:intergenic | 55.0% | |
| GGAAAGTGGGTCGGTTGTGT+CGG | - | chr4.1:19499812-19499831 | None:intergenic | 55.0% | |
| GGGTCGAGATGCCCATTGAA+GGG | - | chr4.1:19499758-19499777 | None:intergenic | 55.0% | |
| TCAATCCTGGGAGACCTTCG+GGG | - | chr4.1:19501788-19501807 | None:intergenic | 55.0% | |
| TGAACGGAGGGAAAGTGGGT+CGG | - | chr4.1:19499821-19499840 | None:intergenic | 55.0% | |
| ! | GGTTGTGTCGGCGATGAGAA+TGG | - | chr4.1:19499800-19499819 | None:intergenic | 55.0% |
| ! | TCTCCTTTAGGAAGGGGACC+TGG | - | chr4.1:19501666-19501685 | None:intergenic | 55.0% |
| ! | TGGCGGGTGTTTGCCGAATA+AGG | + | chr4.1:19500095-19500114 | MS.gene051344:CDS | 55.0% |
| !! | TGAAGAAGCAGTGGGTTGGC+GGG | + | chr4.1:19500079-19500098 | MS.gene051344:CDS | 55.0% |
| CAAGCAGGGTCCTTCGGAAG+AGG | + | chr4.1:19502016-19502035 | MS.gene051344:CDS | 60.0% | |
| CAGGCAGGATTTGGGAAGGG+TGG | + | chr4.1:19500869-19500888 | MS.gene051344:intron | 60.0% | |
| CCTAGGCGGTTTCAGCAAGC+AGG | + | chr4.1:19502001-19502020 | MS.gene051344:CDS | 60.0% | |
| CGGGTCGAGATGCCCATTGA+AGG | - | chr4.1:19499759-19499778 | None:intergenic | 60.0% | |
| CGTCGCTGCGTGTGTCGAAA+CGG | + | chr4.1:19499906-19499925 | MS.gene051344:CDS | 60.0% | |
| GAAAACCCCGAAGGTCTCCC+AGG | + | chr4.1:19501780-19501799 | MS.gene051344:CDS | 60.0% | |
| GGGTCCTTCGGAAGAGGAAG+TGG | + | chr4.1:19502022-19502041 | MS.gene051344:CDS | 60.0% | |
| GTCGCTGCGTGTGTCGAAAC+GGG | + | chr4.1:19499907-19499926 | MS.gene051344:CDS | 60.0% | |
| GTCGGTCCCTTTCGTCTCCA+CGG | + | chr4.1:19499874-19499893 | MS.gene051344:CDS | 60.0% | |
| ! | CCTGCTTGCTGAAACCGCCT+AGG | - | chr4.1:19502004-19502023 | None:intergenic | 60.0% |
| !! | GGGATTGAAGGTGGTGGGTC+GGG | - | chr4.1:19499778-19499797 | None:intergenic | 60.0% |
| !! | GGGGATTGAAGGTGGTGGGT+CGG | - | chr4.1:19499779-19499798 | None:intergenic | 60.0% |
| CTTTCGTCTCCACGGCGAGC+CGG | + | chr4.1:19499882-19499901 | MS.gene051344:CDS | 65.0% | |
| GGCTCGCCGTGGAGACGAAA+GGG | - | chr4.1:19499883-19499902 | None:intergenic | 65.0% | |
| TCGACACACGCAGCGACGAC+CGG | - | chr4.1:19499904-19499923 | None:intergenic | 65.0% | |
| CGGCTCGCCGTGGAGACGAA+AGG | - | chr4.1:19499884-19499903 | None:intergenic | 70.0% | |
| !!! | CAGCGACGACCGGCTCGCCG+TGG | - | chr4.1:19499894-19499913 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 19499595 | 19502349 | 19499595 | ID=MS.gene051344 |
| chr4.1 | mRNA | 19499595 | 19502349 | 19499595 | ID=MS.gene051344.t1;Parent=MS.gene051344 |
| chr4.1 | exon | 19499595 | 19500260 | 19499595 | ID=MS.gene051344.t1.exon1;Parent=MS.gene051344.t1 |
| chr4.1 | CDS | 19499595 | 19500260 | 19499595 | ID=cds.MS.gene051344.t1;Parent=MS.gene051344.t1 |
| chr4.1 | exon | 19501660 | 19502349 | 19501660 | ID=MS.gene051344.t1.exon2;Parent=MS.gene051344.t1 |
| chr4.1 | CDS | 19501660 | 19502349 | 19501660 | ID=cds.MS.gene051344.t1;Parent=MS.gene051344.t1 |
| Gene Sequence |
| Protein sequence |
