AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70189


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70189.t1 MTR_8g094180 97.087 309 4 1 26 329 54 362 0.0 625
MS.gene70189.t1 MTR_8g094180 98.092 262 5 0 26 287 54 315 0.0 541
MS.gene70189.t1 MTR_2g024120 56.135 326 139 4 21 345 55 377 3.75e-132 382
MS.gene70189.t1 MTR_2g037600 38.486 317 157 10 21 328 99 386 4.21e-61 201
MS.gene70189.t1 MTR_4g127550 37.942 311 156 10 26 328 106 387 2.30e-59 196
MS.gene70189.t1 MTR_1g016880 39.159 309 139 10 27 330 106 370 1.27e-57 191
MS.gene70189.t1 MTR_2g037620 38.065 310 155 7 27 328 97 377 1.40e-56 189
MS.gene70189.t1 MTR_5g055480 36.808 307 146 9 24 326 119 381 8.16e-54 182
MS.gene70189.t1 MTR_1g110290 36.156 307 147 9 27 328 124 386 4.46e-51 175
MS.gene70189.t1 MTR_1g009960 34.615 312 162 9 27 327 111 391 1.18e-50 174
MS.gene70189.t1 MTR_5g006930 37.049 305 144 11 27 326 116 377 1.27e-50 173
MS.gene70189.t1 MTR_2g005350 37.013 308 148 10 27 330 168 433 3.01e-50 173
MS.gene70189.t1 MTR_6g083830 37.459 307 140 11 27 326 149 410 5.07e-50 172
MS.gene70189.t1 MTR_8g015500 35.948 306 150 8 27 328 143 406 1.00e-48 169
MS.gene70189.t1 MTR_3g108740 34.185 313 164 9 27 328 92 373 3.90e-48 166
MS.gene70189.t1 MTR_5g006920 36.066 305 147 10 27 326 151 412 7.16e-47 164
MS.gene70189.t1 MTR_1g009960 35.424 271 138 7 27 291 111 350 1.69e-45 159
MS.gene70189.t1 MTR_3g104840 33.555 301 138 9 24 321 138 379 3.06e-43 154
MS.gene70189.t1 MTR_3g106930 28.431 306 178 9 28 326 95 366 3.63e-27 110
MS.gene70189.t1 MTR_1g031060 29.102 323 162 10 26 328 79 354 3.97e-27 110
MS.gene70189.t1 MTR_2g087610 30.503 318 147 11 28 317 78 349 3.36e-23 99.4
MS.gene70189.t1 MTR_1g048320 27.469 324 168 12 24 328 61 336 2.05e-21 94.0
MS.gene70189.t1 MTR_1g031080 27.640 322 151 12 32 328 20 284 9.36e-20 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70189.t1 AT5G14550 76.299 308 73 0 24 331 61 368 0.0 509
MS.gene70189.t1 AT5G14550 76.898 303 70 0 24 326 61 363 0.0 507
MS.gene70189.t1 AT5G14550 70.779 308 63 1 24 331 61 341 4.16e-161 454
MS.gene70189.t1 AT5G14550 72.137 262 60 1 24 285 61 309 2.01e-142 407
MS.gene70189.t1 AT1G11940 55.375 307 133 3 22 327 68 371 3.50e-122 357
MS.gene70189.t1 AT1G62305 54.717 318 139 5 19 335 60 373 5.80e-121 353
MS.gene70189.t1 AT1G62305 50.314 318 129 6 19 335 60 349 1.56e-103 308
MS.gene70189.t1 AT1G62305 58.257 218 87 4 19 235 60 274 1.61e-81 251
MS.gene70189.t1 AT1G11940 60.109 183 72 1 22 203 68 250 7.40e-76 235
MS.gene70189.t1 AT4G31350 36.859 312 160 7 25 328 86 368 7.18e-59 194
MS.gene70189.t1 AT4G31350 36.859 312 160 7 25 328 86 368 7.18e-59 194
MS.gene70189.t1 AT4G31350 36.859 312 160 7 25 328 86 368 7.18e-59 194
MS.gene70189.t1 AT5G57270 38.558 319 147 11 25 328 95 379 4.15e-58 193
MS.gene70189.t1 AT5G57270 38.558 319 147 11 25 328 95 379 4.15e-58 193
MS.gene70189.t1 AT5G57270 38.558 319 147 11 25 328 95 379 4.15e-58 193
MS.gene70189.t1 AT5G57270 38.558 319 147 11 25 328 95 379 4.15e-58 193
MS.gene70189.t1 AT5G57270 38.558 319 147 11 25 328 95 379 4.15e-58 193
MS.gene70189.t1 AT1G10280 36.538 312 150 9 24 330 139 407 1.23e-55 187
MS.gene70189.t1 AT4G31350 35.897 312 158 7 25 328 86 363 8.74e-55 184
MS.gene70189.t1 AT1G73810 38.816 304 140 10 28 326 147 409 1.59e-54 184
MS.gene70189.t1 AT1G68390 33.876 307 158 7 27 329 137 402 6.39e-53 180
MS.gene70189.t1 AT2G19160 36.218 312 157 9 28 328 106 386 1.83e-52 178
MS.gene70189.t1 AT2G19160 36.218 312 157 9 28 328 106 386 1.83e-52 178
MS.gene70189.t1 AT4G25870 35.783 313 158 11 28 328 99 380 1.82e-50 173
MS.gene70189.t1 AT5G11730 36.039 308 146 10 27 328 117 379 3.95e-50 172
MS.gene70189.t1 AT1G51770 35.948 306 149 8 27 328 123 385 7.83e-50 172
MS.gene70189.t1 AT5G16170 36.275 306 153 8 28 329 136 403 1.42e-49 171
MS.gene70189.t1 AT4G30060 34.295 312 163 9 28 328 109 389 2.08e-48 168
MS.gene70189.t1 AT4G30060 34.295 312 163 9 28 328 109 389 2.08e-48 168
MS.gene70189.t1 AT1G10880 34.007 297 151 7 24 317 114 368 3.50e-48 167
MS.gene70189.t1 AT3G21310 35.831 307 148 10 27 328 114 376 8.66e-46 160
MS.gene70189.t1 AT3G21310 35.831 307 148 10 27 328 114 376 8.66e-46 160
MS.gene70189.t1 AT1G68380 35.948 306 149 10 27 328 123 385 1.58e-45 160
MS.gene70189.t1 AT5G25970 34.740 308 150 10 27 328 118 380 5.64e-44 155
MS.gene70189.t1 AT5G25970 34.740 308 150 10 27 328 118 380 5.64e-44 155
MS.gene70189.t1 AT5G25970 34.740 308 150 10 27 328 118 380 5.64e-44 155
MS.gene70189.t1 AT1G51770 31.788 302 140 8 27 328 123 358 2.87e-35 132
MS.gene70189.t1 AT5G25330 30.128 312 171 8 28 329 81 355 4.81e-33 126
MS.gene70189.t1 AT4G32290 29.582 311 177 9 28 328 93 371 4.62e-28 113
MS.gene70189.t1 AT3G52060 28.904 301 159 10 27 318 74 328 1.04e-27 111
MS.gene70189.t1 AT5G22070 29.231 325 153 12 24 318 67 344 2.92e-25 105
MS.gene70189.t1 AT3G21310 41.135 141 75 4 27 163 114 250 8.22e-24 99.0

Find 61 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAAGCCGCTACCCGAATTT+TGG 0.189280 4.1:-8053702 MS.gene70189:CDS
TGGTTTGGGATGCATTCTTT+AGG 0.289253 4.1:-8057278 MS.gene70189:CDS
TCTTCCCAAATCTAGCAAAA+AGG 0.291604 4.1:-8053164 MS.gene70189:intron
GCTTCCTTTGGAATTGGTTT+GGG 0.305701 4.1:-8057292 MS.gene70189:CDS
GGTTTGGGATGCATTCTTTA+GGG 0.307058 4.1:-8057277 MS.gene70189:intron
TTGGTGGTGGTGCTTTGTTT+TGG 0.307690 4.1:-8057435 MS.gene70189:CDS
GATGCTTATTAAATTTATAA+AGG 0.310256 4.1:-8053021 MS.gene70189:intron
GACTTGATCCCTCCAAAATT+CGG 0.318399 4.1:+8053690 None:intergenic
GGCTTCCTTTGGAATTGGTT+TGG 0.319839 4.1:-8057293 MS.gene70189:CDS
TAGTAAACTTTCTTGCAAAA+AGG 0.331608 4.1:+8052421 None:intergenic
TACAACCTTGGCATGCTTCC+TGG 0.336465 4.1:+8054042 None:intergenic
ATGAAGAGAAAAGCAATCTT+AGG 0.355547 4.1:+8057327 None:intergenic
TGCAAGGAATAGGCTTCCTT+TGG 0.360242 4.1:-8057304 MS.gene70189:CDS
TCCACGGCGCTCACGATCTC+TGG 0.364508 4.1:+8053082 None:intergenic
CAGTTATAGACTGGAATAAC+TGG 0.365025 4.1:+8054214 None:intergenic
CAGTTATTCCAGTCTATAAC+TGG 0.365399 4.1:-8054213 MS.gene70189:CDS
GAATAGGCTTCCTTTGGAAT+TGG 0.368624 4.1:-8057298 MS.gene70189:CDS
TTCTCTTCATTGCAAGGAAT+AGG 0.401929 4.1:-8057314 MS.gene70189:CDS
GTTTGAACATAGTGTTCATC+TGG 0.409473 4.1:+8053404 None:intergenic
AAAACAAAGCGGTCATTTAG+AGG 0.415697 4.1:+8055155 None:intergenic
TGCTTGTACACCATTCTCTT+CGG 0.432521 4.1:+8052466 None:intergenic
TGGTATACAGTTGTGGATCT+TGG 0.438795 4.1:+8053424 None:intergenic
CCAGTCTATAACTGGAGAAA+AGG 0.444598 4.1:-8054205 MS.gene70189:CDS
GTGTAGCTGAAGTTGTATAA+AGG 0.444599 4.1:+8054618 None:intergenic
ACTTGATCCCTCCAAAATTC+GGG 0.445648 4.1:+8053691 None:intergenic
TTACTAGGACTGCTGCTTTG+AGG 0.451390 4.1:-8052404 MS.gene70189:CDS
ACACTATGTTCAAACATTGC+TGG 0.459415 4.1:-8053396 MS.gene70189:CDS
TGCAGTGGGCTGTTCTGACC+AGG 0.465429 4.1:-8054060 MS.gene70189:intron
TGCTTTGAGGCTTCTTAACA+TGG 0.485012 4.1:-8052391 MS.gene70189:intron
TAACTGGAGAAAAGGATCTC+AGG 0.488468 4.1:-8054197 MS.gene70189:intron
TTTATAAATTTAATAAGCAT+CGG 0.496105 4.1:+8053023 None:intergenic
TACAGCTTCGCTGACACAAA+AGG 0.500980 4.1:-8054262 MS.gene70189:intron
TGGATCTTGGACGTGTCAGC+AGG 0.503820 4.1:+8053437 None:intergenic
GCGCTCACGATCTCTGGAGT+TGG 0.504969 4.1:+8053088 None:intergenic
ATCGTCCTCCACTACAACCT+TGG 0.509580 4.1:+8054030 None:intergenic
TCCCTCCAAAATTCGGGTAG+CGG 0.515418 4.1:+8053697 None:intergenic
TCTGAGAACTTATAAGTCAC+TGG 0.518003 4.1:+8053053 None:intergenic
TCAAGTTAATGATAGCATAC+AGG 0.530790 4.1:-8056090 MS.gene70189:intron
GCCAGGGTTTGTGTTGAATG+AGG 0.535969 4.1:-8056144 MS.gene70189:CDS
GGGTGAAGCAAGCATGATAG+AGG 0.536814 4.1:-8055213 MS.gene70189:CDS
TCAGCAGAAATGGAAGAAGA+AGG 0.538184 4.1:-8057472 None:intergenic
AAGAGAATGGTGTACAAGCA+AGG 0.546374 4.1:-8052463 MS.gene70189:CDS
GAAGCATGCCAAGGTTGTAG+TGG 0.562145 4.1:-8054038 MS.gene70189:CDS
TTCAACACAAACCCTGGCCT+AGG 0.569608 4.1:+8056149 None:intergenic
GTTCATCTGGTATACAGTTG+TGG 0.575948 4.1:+8053417 None:intergenic
GCCTCATTCAACACAAACCC+TGG 0.577011 4.1:+8056143 None:intergenic
ATGTCTAAGTAAAATGCGCT+CGG 0.580748 4.1:+8055190 None:intergenic
GATCAGTGACACATACTGCA+TGG 0.596005 4.1:-8053118 MS.gene70189:CDS
GTTTGTTGTTTATGCAGATG+CGG 0.596175 4.1:-8057410 MS.gene70189:intron
ATCAGTGACACATACTGCAT+GGG 0.597196 4.1:-8053117 MS.gene70189:CDS
AGAGAATGGTGTACAAGCAA+GGG 0.597758 4.1:-8052462 MS.gene70189:CDS
GAGATCGTGAGCGCCGTGGA+TGG 0.599731 4.1:-8053079 MS.gene70189:CDS
GCATGCCAAGGTTGTAGTGG+AGG 0.609985 4.1:-8054035 MS.gene70189:CDS
AGACTGAATACCGAAGAGAA+TGG 0.627600 4.1:-8052476 MS.gene70189:CDS
AAGTCACTGGATGCCATCCA+CGG 0.632825 4.1:+8053066 None:intergenic
GCATCCCAAACCAATTCCAA+AGG 0.633005 4.1:+8057288 None:intergenic
TCCAGAGATCGTGAGCGCCG+TGG 0.637645 4.1:-8053083 MS.gene70189:CDS
TCTGACCAGGAAGCATGCCA+AGG 0.656062 4.1:-8054047 MS.gene70189:CDS
TATACCCTCACCTATCTGAG+AGG 0.685286 4.1:+8055132 None:intergenic
AGCTTCGCTGACACAAAAGG+AGG 0.705360 4.1:-8054259 MS.gene70189:CDS
TATCTGAGAGGAAAACAAAG+CGG 0.756541 4.1:+8055144 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAAATTTAATAAGCAT+CGG + chr4.1:8056143-8056162 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTGTTGT+AGG - chr4.1:8056643-8056662 MS.gene70189:intron 10.0%
!! AAATCATTATTACAAAAAAG+AGG + chr4.1:8052710-8052729 None:intergenic 15.0%
!! AAATGAATAAATAACTACAA+AGG + chr4.1:8054842-8054861 None:intergenic 15.0%
!! AATTATTAGAAATGTTGTAA+TGG + chr4.1:8052759-8052778 None:intergenic 15.0%
!! ATTAAGTTTATCAATGTAAA+GGG + chr4.1:8052477-8052496 None:intergenic 15.0%
!! ATTTAACAAAACTAATTGTT+GGG + chr4.1:8054771-8054790 None:intergenic 15.0%
!! CAAAAAATAAATAACAATCT+CGG + chr4.1:8057146-8057165 None:intergenic 15.0%
!! GATAAAAATAAGAAACTATT+TGG - chr4.1:8053265-8053284 MS.gene70189:intron 15.0%
!! GATGCTTATTAAATTTATAA+AGG - chr4.1:8056142-8056161 MS.gene70189:CDS 15.0%
!! TATATAAACTAATAAAAGCA+AGG - chr4.1:8056369-8056388 MS.gene70189:intron 15.0%
!! TATATAATGATTGAAGTTTA+TGG + chr4.1:8054070-8054089 None:intergenic 15.0%
!! TATTAAGTTTATCAATGTAA+AGG + chr4.1:8052478-8052497 None:intergenic 15.0%
!! TATTTAACAAAACTAATTGT+TGG + chr4.1:8054772-8054791 None:intergenic 15.0%
!!! AACTATTATTTTCTATAAAG+AGG + chr4.1:8057464-8057483 None:intergenic 15.0%
!!! ACTATTATTTTCTATAAAGA+GGG + chr4.1:8057463-8057482 None:intergenic 15.0%
!!! ATTAAGATTCAGATTTTATT+AGG + chr4.1:8056441-8056460 None:intergenic 15.0%
!!! TAATAGTAGTTTTTACTTTT+TGG - chr4.1:8052493-8052512 MS.gene70189:CDS 15.0%
!!! TAATTAACATTTTGTTAGAA+TGG - chr4.1:8056278-8056297 MS.gene70189:intron 15.0%
!!! TTGAAATAATCTCATTTTAT+CGG - chr4.1:8053770-8053789 MS.gene70189:intron 15.0%
!!! TTTCTCTTTATAGTTTTTTT+AGG + chr4.1:8053213-8053232 None:intergenic 15.0%
!!! TTTTGTTTCTATTTGTTTTT+TGG - chr4.1:8051936-8051955 MS.gene70189:intron 15.0%
!! AAAAATATTAAAGCAAAACC+AGG + chr4.1:8055963-8055982 None:intergenic 20.0%
!! AAAATATTAAAGCAAAACCA+GGG + chr4.1:8055962-8055981 None:intergenic 20.0%
!! AACTATTTGGTAGAATATTA+TGG - chr4.1:8053278-8053297 MS.gene70189:intron 20.0%
!! AATAATAAGGTTATCATACT+AGG - chr4.1:8056227-8056246 MS.gene70189:intron 20.0%
!! AGATTAATGTCGTATATATA+TGG + chr4.1:8054666-8054685 None:intergenic 20.0%
!! ATGGCTTAAAAAATACTAAA+TGG + chr4.1:8055373-8055392 None:intergenic 20.0%
!! CAAATAATAAATGAAGCAAA+AGG + chr4.1:8055282-8055301 None:intergenic 20.0%
!! GGTTTCAAAAAAATTTAGTT+TGG + chr4.1:8054258-8054277 None:intergenic 20.0%
!! TATTGTTTGAATTCATCTTT+AGG + chr4.1:8056327-8056346 None:intergenic 20.0%
!! TTCAATATTTCATTCTGAAT+TGG - chr4.1:8055621-8055640 MS.gene70189:intron 20.0%
!! TTCATTCTGTGATAATAATA+AGG - chr4.1:8056214-8056233 MS.gene70189:intron 20.0%
!! TTGAGTTATTTATCTAAACA+AGG - chr4.1:8057112-8057131 MS.gene70189:intron 20.0%
!! TTGTTTATGGTAAGATAATA+TGG - chr4.1:8052408-8052427 MS.gene70189:CDS 20.0%
!!! AAATGAAATTTGTTAGTAGA+AGG - chr4.1:8052207-8052226 MS.gene70189:intron 20.0%
!!! AACATTTATATTGCATTTTC+AGG - chr4.1:8052959-8052978 MS.gene70189:intron 20.0%
!!! AATGTTTCAAAAATTTTGCA+AGG - chr4.1:8055167-8055186 MS.gene70189:CDS 20.0%
!!! ACATTTATATTGCATTTTCA+GGG - chr4.1:8052960-8052979 MS.gene70189:intron 20.0%
!!! AGATCATTTTTTAGTTTCTT+CGG - chr4.1:8056863-8056882 MS.gene70189:intron 20.0%
!!! ATGTTAGTGGTTATTTTATT+AGG - chr4.1:8052181-8052200 MS.gene70189:intron 20.0%
!!! CAAAAAAATTTAGTTTGGTA+CGG + chr4.1:8054253-8054272 None:intergenic 20.0%
!!! CTTATTTTTATAAGCTATTC+TGG - chr4.1:8053479-8053498 MS.gene70189:intron 20.0%
!!! TGAGCTTTCAAATATTTTTA+CGG - chr4.1:8056834-8056853 MS.gene70189:intron 20.0%
!!! TGTTAGTGGTTATTTTATTA+GGG - chr4.1:8052182-8052201 MS.gene70189:intron 20.0%
!!! TTGCAAAATTTTTGAAACAT+TGG + chr4.1:8055168-8055187 None:intergenic 20.0%
!!! TTGGGTTTTATAACATTTAA+TGG + chr4.1:8055342-8055361 None:intergenic 20.0%
!!! TTTATTTTTTGATTCTCTGT+TGG - chr4.1:8057155-8057174 MS.gene70189:intron 20.0%
! AAAAAAACAAAAAACTGAGC+TGG - chr4.1:8054350-8054369 MS.gene70189:intron 25.0%
! AAATAAGCTGATAACAACTT+AGG + chr4.1:8053466-8053485 None:intergenic 25.0%
! AACATATGGTCAATAAGTTA+AGG + chr4.1:8052793-8052812 None:intergenic 25.0%
! AAGCTATTCTGGATAATTTA+TGG - chr4.1:8053490-8053509 MS.gene70189:intron 25.0%
! AAGTCAAACTTCTTTCATAT+AGG + chr4.1:8053529-8053548 None:intergenic 25.0%
! AATAAGCTGATAACAACTTA+GGG + chr4.1:8053465-8053484 None:intergenic 25.0%
! ACTGAATTGTTCATAAAGTT+TGG - chr4.1:8054146-8054165 MS.gene70189:intron 25.0%
! ACTTTATGAACAATTCAGTT+CGG + chr4.1:8054145-8054164 None:intergenic 25.0%
! AGAAGAATTCATACAAAGAT+AGG + chr4.1:8055084-8055103 None:intergenic 25.0%
! ATAAGTGCTTATCATATAAG+TGG + chr4.1:8057077-8057096 None:intergenic 25.0%
! ATACAAAGATAGGTATAAGA+TGG + chr4.1:8055074-8055093 None:intergenic 25.0%
! ATACTAAATGGAAGAAAGAT+TGG + chr4.1:8055361-8055380 None:intergenic 25.0%
! ATGGTAAGTTCATATATCAT+AGG - chr4.1:8056791-8056810 MS.gene70189:intron 25.0%
! ATTAATCTGTTTATCCAAAC+AGG - chr4.1:8053598-8053617 MS.gene70189:intron 25.0%
! CAATCAACTGAAATATAGTA+AGG + chr4.1:8054505-8054524 None:intergenic 25.0%
! CTAACATTTGCCTATAAAAA+AGG + chr4.1:8052168-8052187 None:intergenic 25.0%
! CTTATATTATGTGTCTCAAT+TGG - chr4.1:8055202-8055221 MS.gene70189:CDS 25.0%
! GACATAACTGTGTATTTAAA+AGG + chr4.1:8052568-8052587 None:intergenic 25.0%
! TACTAAATGGAAGAAAGATT+GGG + chr4.1:8055360-8055379 None:intergenic 25.0%
! TACTTAGTAAAGAAGTAAGA+TGG - chr4.1:8057256-8057275 MS.gene70189:intron 25.0%
! TAGTAAACTTTCTTGCAAAA+AGG + chr4.1:8056745-8056764 None:intergenic 25.0%
! TATATATGCTGATATGTAGT+AGG + chr4.1:8056355-8056374 None:intergenic 25.0%
! TGAAACAAAACTGATAACTA+GGG - chr4.1:8054377-8054396 MS.gene70189:intron 25.0%
! TGGTAAGTTCATATATCATA+GGG - chr4.1:8056792-8056811 MS.gene70189:intron 25.0%
! TTAACTGAAATCTCCTAAAA+CGG + chr4.1:8057186-8057205 None:intergenic 25.0%
! TTAATCTGTTTATCCAAACA+GGG - chr4.1:8053599-8053618 MS.gene70189:intron 25.0%
! TTCCATAATAATTTAGCCAA+AGG + chr4.1:8052826-8052845 None:intergenic 25.0%
! TTGAGACACATAATATAAGA+AGG + chr4.1:8055201-8055220 None:intergenic 25.0%
!! AACAGTTCTAATATTCGATT+TGG + chr4.1:8054327-8054346 None:intergenic 25.0%
!! ATGTTGACTAAATATCATGA+AGG + chr4.1:8053909-8053928 None:intergenic 25.0%
!! TTCTTCTGACATTTTAAACA+TGG + chr4.1:8053838-8053857 None:intergenic 25.0%
!! TTTTTATAGGCAAATGTTAG+TGG - chr4.1:8052168-8052187 MS.gene70189:intron 25.0%
!! TTTTTGCAAGAAAGTTTACT+AGG - chr4.1:8056744-8056763 MS.gene70189:intron 25.0%
!!! GTTAGTGGTTATTTTATTAG+GGG - chr4.1:8052183-8052202 MS.gene70189:intron 25.0%
!!! GTTGATGTTACCTTTTTTAT+AGG - chr4.1:8052155-8052174 MS.gene70189:intron 25.0%
!!! TAGTTATCAGTTTTGTTTCA+CGG + chr4.1:8054377-8054396 None:intergenic 25.0%
!!! TTAGTGGTTATTTTATTAGG+GGG - chr4.1:8052184-8052203 MS.gene70189:intron 25.0%
!!! TTCTAATATTCGATTTGGTT+CGG + chr4.1:8054322-8054341 None:intergenic 25.0%
!!! TTCTTAGTCTTGTTAAATAG+CGG - chr4.1:8056562-8056581 MS.gene70189:intron 25.0%
AAATACACAGTTATGTCCTT+TGG - chr4.1:8052571-8052590 MS.gene70189:intron 30.0%
AAGAGACAAGCACAAATATA+TGG + chr4.1:8055392-8055411 None:intergenic 30.0%
AATACACAGTTATGTCCTTT+GGG - chr4.1:8052572-8052591 MS.gene70189:intron 30.0%
AGACACATAATATAAGAAGG+AGG + chr4.1:8055198-8055217 None:intergenic 30.0%
AGACTATAGAACTTCATAGT+TGG + chr4.1:8053664-8053683 None:intergenic 30.0%
AGATCTAGAGATTAATGAGT+TGG - chr4.1:8053243-8053262 MS.gene70189:intron 30.0%
ATAAGCTGTTATAGTTGACT+AGG - chr4.1:8053177-8053196 MS.gene70189:intron 30.0%
ATCTTTCATTAGTTGACTGA+TGG + chr4.1:8056472-8056491 None:intergenic 30.0%
ATGAAGAGAAAAGCAATCTT+AGG + chr4.1:8051839-8051858 None:intergenic 30.0%
ATTGGTACATGATGTCAATT+AGG - chr4.1:8055639-8055658 MS.gene70189:intron 30.0%
CACCTTTGGCTAAATTATTA+TGG - chr4.1:8052821-8052840 MS.gene70189:intron 30.0%
CATGTGATAAATAAACACAC+AGG + chr4.1:8053695-8053714 None:intergenic 30.0%
CATGTGTTCATATAATTCCT+AGG + chr4.1:8055667-8055686 None:intergenic 30.0%
CCATACGTTGCTTAATTATA+TGG - chr4.1:8054434-8054453 MS.gene70189:intron 30.0%
CCATATAATTAAGCAACGTA+TGG + chr4.1:8054437-8054456 None:intergenic 30.0%
GAGATTGAATAAGAGAACTT+AGG - chr4.1:8053420-8053439 MS.gene70189:CDS 30.0%
GTGAAACAAAACTGATAACT+AGG - chr4.1:8054376-8054395 MS.gene70189:intron 30.0%
TAATCTGTTTATCCAAACAG+GGG - chr4.1:8053600-8053619 MS.gene70189:intron 30.0%
TATTGTTACATTCCTTTCCT+TGG - chr4.1:8053625-8053644 MS.gene70189:intron 30.0%
TCAAGTTAATGATAGCATAC+AGG - chr4.1:8053073-8053092 MS.gene70189:CDS 30.0%
TTAAAAGCTAGCTATCAAGA+GGG + chr4.1:8052653-8052672 None:intergenic 30.0%
! AAAACCATGAGAGTATATGA+TGG + chr4.1:8055306-8055325 None:intergenic 30.0%
! ATCTGGAAAAAGAAGCATAT+AGG + chr4.1:8052086-8052105 None:intergenic 30.0%
! ATCTTTTTGCAGATAGATTG+GGG - chr4.1:8053930-8053949 MS.gene70189:intron 30.0%
! ATTCAGATTTTATTAGGAGC+AGG + chr4.1:8056435-8056454 None:intergenic 30.0%
! GATCTTTTTGCAGATAGATT+GGG - chr4.1:8053929-8053948 MS.gene70189:intron 30.0%
! TGATCTTTTTGCAGATAGAT+TGG - chr4.1:8053928-8053947 MS.gene70189:intron 30.0%
! TTGTTGTTGTAGTTGACTTA+GGG - chr4.1:8053349-8053368 MS.gene70189:intron 30.0%
! TTTAGTTTCTTCGGTTTGAT+TGG - chr4.1:8056872-8056891 MS.gene70189:intron 30.0%
!! GAAGGTTTTTGCTTTGATTT+TGG - chr4.1:8051709-8051728 MS.gene70189:CDS 30.0%
!! GAATGGTACTTGATAATGAT+AGG - chr4.1:8056295-8056314 MS.gene70189:intron 30.0%
!! TTTATATTGCATTTTCAGGG+AGG - chr4.1:8052963-8052982 MS.gene70189:intron 30.0%
AAAACAAAGCGGTCATTTAG+AGG + chr4.1:8054011-8054030 None:intergenic 35.0%
AAACCAAATGATTCTTTGCG+AGG - chr4.1:8054273-8054292 MS.gene70189:intron 35.0%
AAAGTCGAACTGTGTTTCAT+AGG + chr4.1:8057018-8057037 None:intergenic 35.0%
AAATGTTGTAATGGCAAGTG+AGG + chr4.1:8052750-8052769 None:intergenic 35.0%
AACAAAATGCTTATTGCCAG+TGG - chr4.1:8057209-8057228 MS.gene70189:intron 35.0%
AAGAGGAATATTACGAACGA+GGG + chr4.1:8052246-8052265 None:intergenic 35.0%
AAGGTGAGTCTCTTAACATA+TGG + chr4.1:8052807-8052826 None:intergenic 35.0%
AAGTACTCTCCACTTACTAT+AGG - chr4.1:8054089-8054108 MS.gene70189:intron 35.0%
ACACTATGTTCAAACATTGC+TGG - chr4.1:8055767-8055786 MS.gene70189:intron 35.0%
ACTTACTATAGGACTCTTCA+TGG - chr4.1:8054100-8054119 MS.gene70189:intron 35.0%
AGCTCTTTCAAACAGTCTAA+AGG + chr4.1:8056928-8056947 None:intergenic 35.0%
AGGTATAAGATGGCAATCTT+TGG + chr4.1:8055064-8055083 None:intergenic 35.0%
AGGTCGTTACAATCCAAAAA+TGG - chr4.1:8054924-8054943 MS.gene70189:intron 35.0%
AGTGTAGGGACAATTGTTTA+TGG - chr4.1:8052395-8052414 MS.gene70189:CDS 35.0%
ATACACAGTTATGTCCTTTG+GGG - chr4.1:8052573-8052592 MS.gene70189:intron 35.0%
ATCATTGATCAGTACAGTGT+AGG - chr4.1:8052380-8052399 MS.gene70189:intron 35.0%
ATGAAGAGTCCTATAGTAAG+TGG + chr4.1:8054101-8054120 None:intergenic 35.0%
ATGATGTCAATTAGGTTCCT+AGG - chr4.1:8055647-8055666 MS.gene70189:intron 35.0%
ATGCAATAGTGTTCACAGAA+AGG + chr4.1:8055810-8055829 None:intergenic 35.0%
ATGTCTAAGTAAAATGCGCT+CGG + chr4.1:8053976-8053995 None:intergenic 35.0%
CAGTTATAGACTGGAATAAC+TGG + chr4.1:8054952-8054971 None:intergenic 35.0%
CAGTTATTCCAGTCTATAAC+TGG - chr4.1:8054950-8054969 MS.gene70189:intron 35.0%
CATAAGATAGCAAATGGACA+TGG + chr4.1:8053146-8053165 None:intergenic 35.0%
CCAACACATAAGATAGCAAA+TGG + chr4.1:8053152-8053171 None:intergenic 35.0%
CTTAAAAGCTAGCTATCAAG+AGG + chr4.1:8052654-8052673 None:intergenic 35.0%
GCATTGTCGATAATAGTGAA+TGG - chr4.1:8052304-8052323 MS.gene70189:intron 35.0%
GTGTAGCTGAAGTTGTATAA+AGG + chr4.1:8054548-8054567 None:intergenic 35.0%
GTTTCAAACAAAGAGAGAAG+AGG + chr4.1:8053101-8053120 None:intergenic 35.0%
GTTTGAACATAGTGTTCATC+TGG + chr4.1:8055762-8055781 None:intergenic 35.0%
TATCTGAGAGGAAAACAAAG+CGG + chr4.1:8054022-8054041 None:intergenic 35.0%
TATGTTAAGAGACTCACCTT+TGG - chr4.1:8052807-8052826 MS.gene70189:intron 35.0%
TCATTGATCAGTACAGTGTA+GGG - chr4.1:8052381-8052400 MS.gene70189:intron 35.0%
TCTGAGAACTTATAAGTCAC+TGG + chr4.1:8056113-8056132 None:intergenic 35.0%
TGCTAGTTGTTGAAATGTTG+AGG - chr4.1:8052918-8052937 MS.gene70189:intron 35.0%
TGCTCGATTGAGTATTTAAG+CGG - chr4.1:8052617-8052636 MS.gene70189:intron 35.0%
TGTAACAATAAACCCCTGTT+TGG + chr4.1:8053615-8053634 None:intergenic 35.0%
TGTATGAATTCTTCTGCAGT+GGG - chr4.1:8055089-8055108 MS.gene70189:intron 35.0%
TGTTATAGTTGACTAGGTAG+AGG - chr4.1:8053183-8053202 MS.gene70189:intron 35.0%
TTCTCTTCATTGCAAGGAAT+AGG - chr4.1:8051849-8051868 MS.gene70189:intron 35.0%
TTGTATGAATTCTTCTGCAG+TGG - chr4.1:8055088-8055107 MS.gene70189:intron 35.0%
TTGTCCATCATATACTCTCA+TGG - chr4.1:8055299-8055318 MS.gene70189:intron 35.0%
! AAAAGCAAGGTGTGAGATTT+TGG - chr4.1:8056382-8056401 MS.gene70189:intron 35.0%
! ATGATAAGCATCAAAGCACT+TGG + chr4.1:8052687-8052706 None:intergenic 35.0%
! ATGCGGTATACTCATGTTTT+GGG - chr4.1:8051770-8051789 MS.gene70189:intron 35.0%
! CAAAAGCGCAAAAGACTAAA+AGG + chr4.1:8052435-8052454 None:intergenic 35.0%
! GGAATAACTGGATCCATTTT+TGG + chr4.1:8054940-8054959 None:intergenic 35.0%
! GTTGTTGTTGTAGTTGACTT+AGG - chr4.1:8053348-8053367 MS.gene70189:intron 35.0%
! TCAAGAAAGTGATTTTGCAG+TGG + chr4.1:8056187-8056206 None:intergenic 35.0%
! TGATAAGCATCAAAGCACTT+GGG + chr4.1:8052686-8052705 None:intergenic 35.0%
! TTTTATTAGGAGCAGGATCA+AGG + chr4.1:8056428-8056447 None:intergenic 35.0%
! TTTTGCGCTTTTGTATTCTC+TGG - chr4.1:8052442-8052461 MS.gene70189:CDS 35.0%
!! AGTGTTACAAGTTCTGAATC+TGG + chr4.1:8052103-8052122 None:intergenic 35.0%
!! ATATTTTTACGTGATCACCC+TGG - chr4.1:8055942-8055961 MS.gene70189:intron 35.0%
!! CAGTCTAAAGGTGTTTATGT+CGG + chr4.1:8056916-8056935 None:intergenic 35.0%
!! CCATTTGCTATCTTATGTGT+TGG - chr4.1:8053149-8053168 MS.gene70189:CDS 35.0%
!! GGTTTTTGCTTTGATTTTGG+TGG - chr4.1:8051712-8051731 MS.gene70189:CDS 35.0%
!! GTTTGTTGTTTATGCAGATG+CGG - chr4.1:8051753-8051772 MS.gene70189:intron 35.0%
!! TTCGTGTTAGTTCTTTTTCG+AGG + chr4.1:8056025-8056044 None:intergenic 35.0%
!! TTGCTTTTCTCTTCATTGCA+AGG - chr4.1:8051843-8051862 MS.gene70189:intron 35.0%
!! TTTTGCTTTGATTTTGGTGG+TGG - chr4.1:8051715-8051734 MS.gene70189:CDS 35.0%
!!! GATAGCTAGCTTTTAAGAGA+GGG - chr4.1:8052657-8052676 MS.gene70189:intron 35.0%
!!! TGATAGCTAGCTTTTAAGAG+AGG - chr4.1:8052656-8052675 MS.gene70189:intron 35.0%
AAGAGAATGGTGTACAAGCA+AGG - chr4.1:8056700-8056719 MS.gene70189:intron 40.0%
AATATTACGAACGAGGGTCT+AGG + chr4.1:8052240-8052259 None:intergenic 40.0%
ACTTGATCCCTCCAAAATTC+GGG + chr4.1:8055475-8055494 None:intergenic 40.0%
AGACTGAATACCGAAGAGAA+TGG - chr4.1:8056687-8056706 MS.gene70189:intron 40.0%
AGAGAATGGTGTACAAGCAA+GGG - chr4.1:8056701-8056720 MS.gene70189:intron 40.0%
AGGGATCAAGTCATTGTAAG+TGG - chr4.1:8055484-8055503 MS.gene70189:intron 40.0%
AGGTTATCATACTAGGAAGC+TGG - chr4.1:8056234-8056253 MS.gene70189:intron 40.0%
AGTCCTCGCAAAGAATCATT+TGG + chr4.1:8054279-8054298 None:intergenic 40.0%
ATCAGTGACACATACTGCAT+GGG - chr4.1:8056046-8056065 MS.gene70189:intron 40.0%
CAAGAGGAATATTACGAACG+AGG + chr4.1:8052247-8052266 None:intergenic 40.0%
CCAGTCTATAACTGGAGAAA+AGG - chr4.1:8054958-8054977 MS.gene70189:intron 40.0%
CTGTGTTTCATAGGCTATCT+TGG + chr4.1:8057009-8057028 None:intergenic 40.0%
GAAATGTTGAGGTGCAGTAA+CGG - chr4.1:8052929-8052948 MS.gene70189:intron 40.0%
GACTTGATCCCTCCAAAATT+CGG + chr4.1:8055476-8055495 None:intergenic 40.0%
GATTGAGTATTTAAGCGGCT+TGG - chr4.1:8052622-8052641 MS.gene70189:intron 40.0%
GGGGTAAACTATTAGTGGTT+TGG + chr4.1:8054182-8054201 None:intergenic 40.0%
GTTCATCTGGTATACAGTTG+TGG + chr4.1:8055749-8055768 None:intergenic 40.0%
TAACATCAACACGTCCTTGA+AGG + chr4.1:8052277-8052296 None:intergenic 40.0%
TAACTGGAGAAAAGGATCTC+AGG - chr4.1:8054966-8054985 MS.gene70189:intron 40.0%
TCCTTCTGATAGAACTTCAC+AGG + chr4.1:8052535-8052554 None:intergenic 40.0%
TCTTGCAAAAAGGAAGCAAG+TGG + chr4.1:8056735-8056754 None:intergenic 40.0%
TGCTTGTACACCATTCTCTT+CGG + chr4.1:8056700-8056719 None:intergenic 40.0%
TGGTATACAGTTGTGGATCT+TGG + chr4.1:8055742-8055761 None:intergenic 40.0%
! AAGCTTTATCCCACTAAGTG+GGG + chr4.1:8053327-8053346 None:intergenic 40.0%
! CAAGCTTTATCCCACTAAGT+GGG + chr4.1:8053328-8053347 None:intergenic 40.0%
! CCTTTTCTCCAGTTATAGAC+TGG + chr4.1:8054961-8054980 None:intergenic 40.0%
! GAAATGTGCTAGAGAGCATA+AGG + chr4.1:8054634-8054653 None:intergenic 40.0%
! GAGGCCTTTTTGCTAGATTT+GGG + chr4.1:8056006-8056025 None:intergenic 40.0%
! GATGCGGTATACTCATGTTT+TGG - chr4.1:8051769-8051788 MS.gene70189:intron 40.0%
! GGTTTGGGATGCATTCTTTA+GGG - chr4.1:8051886-8051905 MS.gene70189:intron 40.0%
! GTGTGTACTTGGTGGTTAAT+AGG - chr4.1:8051991-8052010 MS.gene70189:intron 40.0%
! TCTCGATTTTCGTTCATCCT+AGG - chr4.1:8052997-8053016 MS.gene70189:intron 40.0%
! TGGTTTGGGATGCATTCTTT+AGG - chr4.1:8051885-8051904 MS.gene70189:intron 40.0%
! TGTACTTGGTGGTTAATAGG+AGG - chr4.1:8051994-8052013 MS.gene70189:intron 40.0%
! TTTTCCTCTCAGATAGGTGA+GGG - chr4.1:8054027-8054046 MS.gene70189:CDS 40.0%
!! AGATTCTAGTTCATCCCCAA+AGG + chr4.1:8052590-8052609 None:intergenic 40.0%
!! GAATAGGCTTCCTTTGGAAT+TGG - chr4.1:8051865-8051884 MS.gene70189:intron 40.0%
!! GCTTCCTTTGGAATTGGTTT+GGG - chr4.1:8051871-8051890 MS.gene70189:intron 40.0%
!! TGCTTTGAGGCTTCTTAACA+TGG - chr4.1:8056772-8056791 MS.gene70189:intron 40.0%
!!! CATCGACTAGTTTTGTCGAT+AGG - chr4.1:8054588-8054607 MS.gene70189:CDS 40.0%
!!! GCTTTGTTTTCCTCTCAGAT+AGG - chr4.1:8054021-8054040 MS.gene70189:CDS 40.0%
ACCTACACATCAGCTTGGTT+CGG + chr4.1:8054208-8054227 None:intergenic 45.0%
ACTGAACCTACACATCAGCT+TGG + chr4.1:8054213-8054232 None:intergenic 45.0%
AGGTAACATCAACGCACTAC+CGG + chr4.1:8052148-8052167 None:intergenic 45.0%
ATCAACACGTCCTTGAAGGA+GGG + chr4.1:8052273-8052292 None:intergenic 45.0%
CCACACTTGAATCCAAGGAA+AGG + chr4.1:8053640-8053659 None:intergenic 45.0%
CCACTTAGTGGGATAAAGCT+TGG - chr4.1:8053326-8053345 MS.gene70189:intron 45.0%
CCTTTCCTTGGATTCAAGTG+TGG - chr4.1:8053637-8053656 MS.gene70189:intron 45.0%
CTTCATGGTTTCGTTCAGGA+GGG - chr4.1:8054115-8054134 MS.gene70189:intron 45.0%
GACTCTTCATGGTTTCGTTC+AGG - chr4.1:8054111-8054130 MS.gene70189:intron 45.0%
GATCAGTGACACATACTGCA+TGG - chr4.1:8056045-8056064 MS.gene70189:intron 45.0%
GATGTGTAGGTTCAGTGTAC+CGG - chr4.1:8054217-8054236 MS.gene70189:CDS 45.0%
GCAAAAAGGAAGCAAGTGGA+CGG + chr4.1:8056731-8056750 None:intergenic 45.0%
GCATCCCAAACCAATTCCAA+AGG + chr4.1:8051878-8051897 None:intergenic 45.0%
GCCTGTGAAGTTCTATCAGA+AGG - chr4.1:8052531-8052550 MS.gene70189:intron 45.0%
GGTTCGGGGTAAACTATTAG+TGG + chr4.1:8054187-8054206 None:intergenic 45.0%
TACAGCTTCGCTGACACAAA+AGG - chr4.1:8054901-8054920 MS.gene70189:intron 45.0%
TAGAATGAGACTATCGCCGT+CGG + chr4.1:8055420-8055439 None:intergenic 45.0%
TATACCCTCACCTATCTGAG+AGG + chr4.1:8054034-8054053 None:intergenic 45.0%
TCTTCATGGTTTCGTTCAGG+AGG - chr4.1:8054114-8054133 MS.gene70189:intron 45.0%
TGATTCTTTGCGAGGACTGT+TGG - chr4.1:8054281-8054300 MS.gene70189:intron 45.0%
TGCAAGGAATAGGCTTCCTT+TGG - chr4.1:8051859-8051878 MS.gene70189:intron 45.0%
TGTGTGTGTGTGTGTGTACT+TGG - chr4.1:8051980-8051999 MS.gene70189:intron 45.0%
TTGGACCACACTTGAATCCA+AGG + chr4.1:8053645-8053664 None:intergenic 45.0%
TTGGTACGGAACCACATAAC+CGG + chr4.1:8054239-8054258 None:intergenic 45.0%
TTTATCCCACTAAGTGGGGT+CGG + chr4.1:8053323-8053342 None:intergenic 45.0%
! AAAAGCCGCTACCCGAATTT+TGG - chr4.1:8055461-8055480 MS.gene70189:intron 45.0%
! ATTTTCGTTCATCCTAGGCC+AGG - chr4.1:8053002-8053021 MS.gene70189:intron 45.0%
! CCAAGCTTTATCCCACTAAG+TGG + chr4.1:8053329-8053348 None:intergenic 45.0%
! CGAGGCCTTTTTGCTAGATT+TGG + chr4.1:8056007-8056026 None:intergenic 45.0%
! GCTTGTCTCTTTTATGCCGA+CGG - chr4.1:8055401-8055420 MS.gene70189:intron 45.0%
! GTTTTCCTCTCAGATAGGTG+AGG - chr4.1:8054026-8054045 MS.gene70189:CDS 45.0%
! TCTGTTGGACAGTCCGTTTT+AGG - chr4.1:8057170-8057189 MS.gene70189:intron 45.0%
! TTTTCGTTCATCCTAGGCCA+GGG - chr4.1:8053003-8053022 MS.gene70189:intron 45.0%
!! GGCTTCCTTTGGAATTGGTT+TGG - chr4.1:8051870-8051889 MS.gene70189:intron 45.0%
!! TTACTAGGACTGCTGCTTTG+AGG - chr4.1:8056759-8056778 MS.gene70189:intron 45.0%
!!! TGGTGGTGGTGCTTTGTTTT+GGG - chr4.1:8051729-8051748 MS.gene70189:CDS 45.0%
!!! TTGGTGGTGGTGCTTTGTTT+TGG - chr4.1:8051728-8051747 MS.gene70189:CDS 45.0%
AAGTCACTGGATGCCATCCA+CGG + chr4.1:8056100-8056119 None:intergenic 50.0%
ACCGAACCAAGCTGATGTGT+AGG - chr4.1:8054204-8054223 MS.gene70189:CDS 50.0%
ACTCTGCTTGTATCAGCCAC+TGG + chr4.1:8057228-8057247 None:intergenic 50.0%
AGCTACCGTTGCATAGTTCC+CGG - chr4.1:8052126-8052145 MS.gene70189:intron 50.0%
AGCTTCGCTGACACAAAAGG+AGG - chr4.1:8054904-8054923 MS.gene70189:intron 50.0%
ATCGTCCTCCACTACAACCT+TGG + chr4.1:8055136-8055155 None:intergenic 50.0%
CACTACCGGGAACTATGCAA+CGG + chr4.1:8052134-8052153 None:intergenic 50.0%
CATCAACACGTCCTTGAAGG+AGG + chr4.1:8052274-8052293 None:intergenic 50.0%
GAAGCATGCCAAGGTTGTAG+TGG - chr4.1:8055125-8055144 MS.gene70189:intron 50.0%
GCCAGGGTTTGTGTTGAATG+AGG - chr4.1:8053019-8053038 MS.gene70189:intron 50.0%
GCCTCATTCAACACAAACCC+TGG + chr4.1:8053023-8053042 None:intergenic 50.0%
GGGTGAAGCAAGCATGATAG+AGG - chr4.1:8053950-8053969 MS.gene70189:intron 50.0%
GGTAACATCAACGCACTACC+GGG + chr4.1:8052147-8052166 None:intergenic 50.0%
GTGTGTGTGTGTGTACTTGG+TGG - chr4.1:8051983-8052002 MS.gene70189:intron 50.0%
TACAACCTTGGCATGCTTCC+TGG + chr4.1:8055124-8055143 None:intergenic 50.0%
TCCCTCCAAAATTCGGGTAG+CGG + chr4.1:8055469-8055488 None:intergenic 50.0%
TTCAACACAAACCCTGGCCT+AGG + chr4.1:8053017-8053036 None:intergenic 50.0%
!! ACATCAGCTTGGTTCGGTTC+GGG + chr4.1:8054202-8054221 None:intergenic 50.0%
!! CACATCAGCTTGGTTCGGTT+CGG + chr4.1:8054203-8054222 None:intergenic 50.0%
!! GGTTCAGTGTACCGGTTATG+TGG - chr4.1:8054225-8054244 MS.gene70189:CDS 50.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr4.1:8053315-8053334 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr4.1:8053314-8053333 MS.gene70189:intron 55.0%
CCTCTTGCATCCCTCCTTCA+AGG - chr4.1:8052260-8052279 MS.gene70189:intron 55.0%
CCTTGAAGGAGGGATGCAAG+AGG + chr4.1:8052263-8052282 None:intergenic 55.0%
GCATGCCAAGGTTGTAGTGG+AGG - chr4.1:8055128-8055147 MS.gene70189:intron 55.0%
TGGATCTTGGACGTGTCAGC+AGG + chr4.1:8055729-8055748 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr4.1:8053315-8053334 MS.gene70189:intron 55.0%
! AGCCGCTACCCGAATTTTGG+AGG - chr4.1:8055464-8055483 MS.gene70189:intron 55.0%
! GCCGCTACCCGAATTTTGGA+GGG - chr4.1:8055465-8055484 MS.gene70189:intron 55.0%
! TCTGACCAGGAAGCATGCCA+AGG - chr4.1:8055116-8055135 MS.gene70189:intron 55.0%
!! CATCAGCTTGGTTCGGTTCG+GGG + chr4.1:8054201-8054220 None:intergenic 55.0%
TCAGCAGGCTGCGCGAAGAA+AGG + chr4.1:8055714-8055733 None:intergenic 60.0%
!! GCGCTCACGATCTCTGGAGT+TGG + chr4.1:8056078-8056097 None:intergenic 60.0%
!! TGCAGTGGGCTGTTCTGACC+AGG - chr4.1:8055103-8055122 MS.gene70189:intron 60.0%
TCCACGGCGCTCACGATCTC+TGG + chr4.1:8056084-8056103 None:intergenic 65.0%
! GAGATCGTGAGCGCCGTGGA+TGG - chr4.1:8056084-8056103 MS.gene70189:intron 65.0%
! TCCAGAGATCGTGAGCGCCG+TGG - chr4.1:8056080-8056099 MS.gene70189:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 8051700 8057485 8051700 ID=MS.gene70189
chr4.1 mRNA 8051700 8057485 8051700 ID=MS.gene70189.t1;Parent=MS.gene70189
chr4.1 exon 8057411 8057485 8057411 ID=MS.gene70189.t1.exon1;Parent=MS.gene70189.t1
chr4.1 CDS 8057411 8057485 8057411 ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1
chr4.1 exon 8057278 8057352 8057278 ID=MS.gene70189.t1.exon2;Parent=MS.gene70189.t1
chr4.1 CDS 8057278 8057352 8057278 ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1
chr4.1 exon 8056091 8056204 8056091 ID=MS.gene70189.t1.exon3;Parent=MS.gene70189.t1
chr4.1 CDS 8056091 8056204 8056091 ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1
chr4.1 exon 8055143 8055243 8055143 ID=MS.gene70189.t1.exon4;Parent=MS.gene70189.t1
chr4.1 CDS 8055143 8055243 8055143 ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1
chr4.1 exon 8054576 8054647 8054576 ID=MS.gene70189.t1.exon5;Parent=MS.gene70189.t1
chr4.1 CDS 8054576 8054647 8054576 ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1
chr4.1 exon 8054198 8054279 8054198 ID=MS.gene70189.t1.exon6;Parent=MS.gene70189.t1
chr4.1 CDS 8054198 8054279 8054198 ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1
chr4.1 exon 8053997 8054077 8053997 ID=MS.gene70189.t1.exon7;Parent=MS.gene70189.t1
chr4.1 CDS 8053997 8054077 8053997 ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1
chr4.1 exon 8053687 8053725 8053687 ID=MS.gene70189.t1.exon8;Parent=MS.gene70189.t1
chr4.1 CDS 8053687 8053725 8053687 ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1
chr4.1 exon 8053394 8053459 8053394 ID=MS.gene70189.t1.exon9;Parent=MS.gene70189.t1
chr4.1 CDS 8053394 8053459 8053394 ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1
chr4.1 exon 8053022 8053171 8053022 ID=MS.gene70189.t1.exon10;Parent=MS.gene70189.t1
chr4.1 CDS 8053022 8053171 8053022 ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1
chr4.1 exon 8052392 8052520 8052392 ID=MS.gene70189.t1.exon11;Parent=MS.gene70189.t1
chr4.1 CDS 8052392 8052520 8052392 ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1
chr4.1 exon 8051700 8051756 8051700 ID=MS.gene70189.t1.exon12;Parent=MS.gene70189.t1
chr4.1 CDS 8051700 8051756 8051700 ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1
Gene Sequence

>MS.gene70189

ATGGAAGAAGAAGGTTTTTGCTTTGATTTTGGTGGTGGTGCTTTGTTTTGGGAGTTTGTTGTTTATGCAGATGCGGTATACTCATGTTTTGGGACTTGTTTCATTGCAACATCAACTTGTTTCTCAAGTTCAGAAGCCTAAGATTGCTTTTCTCTTCATTGCAAGGAATAGGCTTCCTTTGGAATTGGTTTGGGATGCATTCTTTAGGGTACACTCTTTTTCTCTTTCAATTATTATTTTGTTTCTATTTGTTTTTTGGAATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTGGTGGTTAATAGGAGGCTTAATTAGAAACTAAAGTAGAGTGCATCAATTGTGCTTAGTTTCAGCTTTAATGATTAATCAAAGCCTATATGCTTCTTTTTCCAGATTCAGAACTTGTAACACTTTGAGCTACCGTTGCATAGTTCCCGGTAGTGCGTTGATGTTACCTTTTTTATAGGCAAATGTTAGTGGTTATTTTATTAGGGGGAAATGAAATTTGTTAGTAGAAGGAATCGAACCTAGACCCTCGTTCGTAATATTCCTCTTGCATCCCTCCTTCAAGGACGTGTTGATGTTACTTGAATGCATTGTCGATAATAGTGAATGGTGTAAATTTAGTAACTTCAATAATATGTTTTAAATCATGATGTGCATTTAGCAATCATTGATCAGTACAGTGTAGGGACAATTGTTTATGGTAAGATAATATGGTCCTTTTAGTCTTTTGCGCTTTTGTATTCTCTGGTGTTCGATACCCTTTACATTGATAAACTTAATAGTAGTTTTTACTTTTTGGAGAGCTTAGATGTGTGCCTGTGAAGTTCTATCAGAAGGAAATTTTGATTCCTTTTAAATACACAGTTATGTCCTTTGGGGATGAACTAGAATCTAGAAACATGCTCGATTGAGTATTTAAGCGGCTTGGTTCTTCCCTCTTGATAGCTAGCTTTTAAGAGAGGGTTTCCCAAGTGCTTTGATGCTTATCATCCTCTTTTTTGTAATAATGATTTTGATAAGAGCAATTTTACCTCACTTGCCATTACAACATTTCTAATAATTAACGCAAGCTTCCTTAACTTATTGACCATATGTTAAGAGACTCACCTTTGGCTAAATTATTATGGAAGTGTTCATAATAGATGTGTAGTTGTTGATTCTCATTAATGTTTGTTTTGTAAATGTTAGCAATTTCATAGAATGCTAGTTGTTGAAATGTTGAGGTGCAGTAACGGTTACAGAAACATTTATATTGCATTTTCAGGGAGGCGATAACAATTTCTCGATTTTCGTTCATCCTAGGCCAGGGTTTGTGTTGAATGAGGCAACAACTAGATCATCATATTTTTTGAATCGTCAAGTTAATGATAGCATACAGGTTCCTCTTCTCTCTTTGTTTGAAACATAATTTGCTTTTTGTTATCAACCATGTCCATTTGCTATCTTATGTGTTGGAATCAATAAGCTGTTATAGTTGACTAGGTAGAGGAAGACCTAAAAAAACTATAAAGAGAAACTATTATGAAAGATCTAGAGATTAATGAGTTGGATAAAAATAAGAAACTATTTGGTAGAATATTATGGCGTCGTTTGATCCATGTAGCCGACCCCACTTAGTGGGATAAAGCTTGGTTGTTGTTGTAGTTGACTTAGGGCTGTTTGAATCGACTTATTTGAACTTATCTACTGCTATAAACGCTTGTGAGATTGAATAAGAGAACTTAGGAAGACAGCTTAAGACATGTCCCTAAGTTGTTATCAGCTTATTTTTATAAGCTATTCTGGATAATTTATGGAAATAGCTTATAGCCTATATGAAAGAAGTTTGACTTTTTATTTGATCTTTTGTTATAAAAATAGTTTAGACATAAGCAATGCTTAATTAATCTGTTTATCCAAACAGGGGTTTATTGTTACATTCCTTTCCTTGGATTCAAGTGTGGTCCAACTATGAAGTTCTATAGTCTAATTTTATCCTGTGTGTTTATTTATCACATGTAAAACACTGTTATATAGTTTATTTTGACTCAAACACAGTTAATATAGTTACTTATTGAAATAATCTCATTTTATCGGCTGATTTCTATCTCACTCTCATCGATGAATTATTTGCTTATACCATGTTTAAAATGTCAGAAGAAAAATTATTTCAATTTACTAAACTGTAATATGATTTTGTTATGTTTATACCTTCATGATATTTAGTCAACATGATCTTTTTGCAGATAGATTGGGGTGAAGCAAGCATGATAGAGGCCGAGCGCATTTTACTTAGACATGCTCTTGATGATCCTCTAAATGACCGCTTTGTTTTCCTCTCAGATAGGTGAGGGTATAATTTTGTTAACAACCATAAACTTCAATCATTATATAAGTACTCTCCACTTACTATAGGACTCTTCATGGTTTCGTTCAGGAGGGAAAACCGAACTGAATTGTTCATAAAGTTTGGTAAAATTGAACCAAACCACTAATAGTTTACCCCGAACCGAACCAAGCTGATGTGTAGGTTCAGTGTACCGGTTATGTGGTTCCGTACCAAACTAAATTTTTTTGAAACCAAATGATTCTTTGCGAGGACTGTTGGAAAAAAAACGAAAAACCGAACCAAATCGAATATTAGAACTGTTTTGAAAAAAACAAAAAACTGAGCTGGACCGTGAAACAAAACTGATAACTAGGGTTCAATTTTTTATTTTTTTCAACAGTTCTACTTACCATACGTTGCTTAATTATATGGTAGAAGAAAAATGATAACTGATGTTTCTCAAATTTTGAGCTAGCACCTTACTATATTTCAGTTGATTGATTTTCTTTTCAGCTGTATACCTTTATACAACTTCAGCTACACATATGACTACATCATGTCAGCATCGACTAGTTTTGTCGATAGGTGAGTTAATATACACACTTGCCTTATGCTCTCTAGCACATTTCAATAAAGCTCCATATATATACGACATTAATCTTGACAGATTTCAATAATATATCAGATGATTTTTAGATTTATGTAAAAATTTACAGAGATGATCTGTTATATAAACTTTCAGTCCCAACAATTAGTTTTGTTAAATACATATTGAGTAAAACGTCATTGAAGTTACTTGTTACTATTTATTATGCCTTTGTAGTTATTTATTCATTTGCAACAATATAATTGTTATGAATTTATCATTAAAATATATACAGCTTCGCTGACACAAAAGGAGGTCGTTACAATCCAAAAATGGATCCAGTTATTCCAGTCTATAACTGGAGAAAAGGATCTCAGGTAAAAAAAATCTAATGTAATGTGTCGTTTACTATAAGTTCATTCTAAATCTTAAATTACAACACATTCATTGCCAAAGATTGCCATCTTATACCTATCTTTGTATGAATTCTTCTGCAGTGGGCTGTTCTGACCAGGAAGCATGCCAAGGTTGTAGTGGAGGACGATACTGTCTTTCCAATGTTTCAAAAATTTTGCAAGGTACTTCCTCCTTCTTATATTATGTGTCTCAATTGGAACATGCACATATCTTACGAAAATGATTAATGATACGAATTTTCAATGCAATATCCTTTTGCTTCATTTATTATTTGTCCATCATATACTCTCATGGTTTTCACAAATACTATGCCATTAAATGTTATAAAACCCAATCTTTCTTCCATTTAGTATTTTTTAAGCCATATATTTGTGCTTGTCTCTTTTATGCCGACGGCGATAGTCTCATTCTACTTTTCATCTCTAAATGTAGAAAAAGCCGCTACCCGAATTTTGGAGGGATCAAGTCATTGTAAGTGGTCTATGTAGTATCTACAAACAAAGTTATTTAATAATTTCTTTATTTTATAACATTAGCTTCAATTAGTCACTTTTCTTAATAAAATCATAAGTTCTGCTCAAAAAAATGTCTGATTCAATATTTCATTCTGAATTGGTACATGATGTCAATTAGGTTCCTAGGAATTATATGAACACATGAAGTAACGACTTTTTAATACATCTCCTTTCTTCGCGCAGCCTGCTGACACGTCCAAGATCCACAACTGTATACCAGATGAACACTATGTTCAAACATTGCTGGCTGTAAGAATCTCTTTTCCTTTCTGTGAACACTATTGCATTTCTTTCAAGTTGAATATAAAACATCTTTTGAAAAACAGACAGTTAAAGAAATCAAAGAAAATACATTGCATCTATTTTAAACTTTATGATGTTGCTTGTTTAATTTTACAAATATTTTTACGTGATCACCCTGGTTTTGCTTTAATATTTTTTTACTATTTGTGTTTTTCTTCCCAAATCTAGCAAAAAGGCCTCGAAAAAGAACTAACACGAAGATCAGTGACACATACTGCATGGGATATTTCCAACTCCAGAGATCGTGAGCGCCGTGGATGGCATCCAGTGACTTATAAGTTCTCAGATGCTACTCCGATGCTTATTAAATTTATAAAGGTTTGACATGTACTGCACTACCACTGCAAAATCACTTTCTTGAATCAACTTTCATTCTGTGATAATAATAAGGTTATCATACTAGGAAGCTGGAGACATTATAGAGTATATTAATAATTAACATTTTGTTAGAATGGTACTTGATAATGATAGGAATCATCCTAAAGATGAATTCAAACAATAATTCACCTACTACATATCAGCATATATAAACTAATAAAAGCAAGGTGTGAGATTTTGGTTATTATAGCTAAGAAAATTCCTTGATCCTGCTCCTAATAAAATCTGAATCTTAATTTTGATTTCCATCAGTCAACTAATGAAAGATACGTTTTAAAGAGCAATTAGCGTAGCAGAAATTTAAACAAATTGTTATTGCTATGCAATAAGTTGTTTAGTTCTTAGTCTTGTTAAATAGCGGCTATAGTATAAAGTTCATGTATTCTACTTTGATGAAACAAAATATGTATAAGTTTGATTTTTTTTTTTTTTTTGTTGTAGGAAATAGATAATATTTATTACGAGACTGAATACCGAAGAGAATGGTGTACAAGCAAGGGTAAACCGTCCACTTGCTTCCTTTTTGCAAGAAAGTTTACTAGGACTGCTGCTTTGAGGCTTCTTAACATGGTAAGTTCATATATCATAGGGTTTTCTTGATGAGTGATTGTGAGCTTTCAAATATTTTTACGGTAAACTAGATCATTTTTTAGTTTCTTCGGTTTGATTGGTTTATTTGAGTTTATCGACCGACATAAACACCTTTAGACTGTTTGAAAGAGCTTATGAATAAAGCTTCTGATATGTCAATAATCTGTTTTCAGCTTATTTTCATAAGCTTGCCAAGATAGCCTATGAAACACAGTTCGACTTTATTTTATCTTTTGTTATAGAAATAGTCTATACATAGCCACTTATATGATAAGCACTTATGCTATAAATGCTTAATTGAGTTATTTATCTAAACAAGGTCTCTCTGCCGAGATTGTTATTTATTTTTTGATTCTCTGTTGGACAGTCCGTTTTAGGAGATTTCAGTTAAAAGAACAAAATGCTTATTGCCAGTGGCTGATACAAGCAGAGTAGAACATGTACTTAGTAAAGAAGTAAGATGGAGAAAAGAGAATAAAGCAAAAGCAGTTGAAGATTATTGACTGCTACAGTGATATGTATATTGAATTGTATTGTATTGTACATTTAGACAGTTAAAATGAGTGCTTGTGTATTGTGATGTATATGTTCTAATTTTTTATTTTATTTTTCAGAATAATTTTGACAACAATCTTGCAAGACAGTCCCTCTTTATAGAAAATAATAGTTGA

Protein sequence

>MS.gene70189.t1

MEEEGFCFDFGGGALFWEFVVYADAKPKIAFLFIARNRLPLELVWDAFFRGGDNNFSIFVHPRPGFVLNEATTRSSYFLNRQVNDSIQIDWGEASMIEAERILLRHALDDPLNDRFVFLSDSCIPLYNFSYTYDYIMSASTSFVDSFADTKGGRYNPKMDPVIPVYNWRKGSQWAVLTRKHAKVVVEDDTVFPMFQKFCKKKPLPEFWRDQVIPADTSKIHNCIPDEHYVQTLLAQKGLEKELTRRSVTHTAWDISNSRDRERRGWHPVTYKFSDATPMLIKFIKEIDNIYYETEYRREWCTSKGKPSTCFLFARKFTRTAALRLLNMNNFDNNLARQSLFIENNS