Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70189.t1 | XP_024629576.1 | 98.7 | 304 | 4 | 0 | 26 | 329 | 54 | 357 | 4.00E-178 | 634 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70189.t1 | Q65XS5 | 77.7 | 305 | 65 | 2 | 28 | 329 | 85 | 389 | 3.8e-145 | 515.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70189.t1 | A0A396GRJ7 | 98.7 | 304 | 4 | 0 | 26 | 329 | 54 | 357 | 2.9e-178 | 634.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050156 | MS.gene70189 | 0.810911 | 9.11E-51 | -1.69E-46 |
MS.gene050442 | MS.gene70189 | 0.807362 | 5.25E-50 | -1.69E-46 |
MS.gene050719 | MS.gene70189 | 0.811996 | 5.29E-51 | -1.69E-46 |
MS.gene050721 | MS.gene70189 | 0.807649 | 4.56E-50 | -1.69E-46 |
MS.gene050724 | MS.gene70189 | 0.80242 | 5.66E-49 | -1.69E-46 |
MS.gene050787 | MS.gene70189 | 0.806582 | 7.67E-50 | -1.69E-46 |
MS.gene050844 | MS.gene70189 | 0.81728 | 3.58E-52 | -1.69E-46 |
MS.gene051265 | MS.gene70189 | 0.838227 | 3.26E-57 | -1.69E-46 |
MS.gene052190 | MS.gene70189 | 0.801092 | 1.06E-48 | -1.69E-46 |
MS.gene052611 | MS.gene70189 | 0.801528 | 8.63E-49 | -1.69E-46 |
MS.gene053054 | MS.gene70189 | -0.812698 | 3.72E-51 | -1.69E-46 |
MS.gene053226 | MS.gene70189 | 0.807657 | 4.54E-50 | -1.69E-46 |
MS.gene054433 | MS.gene70189 | 0.804846 | 1.78E-49 | -1.69E-46 |
MS.gene054467 | MS.gene70189 | 0.810459 | 1.14E-50 | -1.69E-46 |
MS.gene054468 | MS.gene70189 | 0.815371 | 9.57E-52 | -1.69E-46 |
MS.gene05468 | MS.gene70189 | 0.807751 | 4.34E-50 | -1.69E-46 |
MS.gene054775 | MS.gene70189 | 0.806626 | 7.51E-50 | -1.69E-46 |
MS.gene055356 | MS.gene70189 | 0.840608 | 7.85E-58 | -1.69E-46 |
MS.gene055357 | MS.gene70189 | 0.808715 | 2.70E-50 | -1.69E-46 |
MS.gene055358 | MS.gene70189 | 0.850996 | 1.18E-60 | -1.69E-46 |
MS.gene055778 | MS.gene70189 | 0.813242 | 2.83E-51 | -1.69E-46 |
MS.gene05604 | MS.gene70189 | 0.805914 | 1.06E-49 | -1.69E-46 |
MS.gene056498 | MS.gene70189 | 0.8031 | 4.09E-49 | -1.69E-46 |
MS.gene056506 | MS.gene70189 | 0.823054 | 1.70E-53 | -1.69E-46 |
MS.gene057026 | MS.gene70189 | 0.803228 | 3.85E-49 | -1.69E-46 |
MS.gene057200 | MS.gene70189 | 0.80676 | 7.03E-50 | -1.69E-46 |
MS.gene057444 | MS.gene70189 | 0.807394 | 5.16E-50 | -1.69E-46 |
MS.gene058168 | MS.gene70189 | 0.807556 | 4.77E-50 | -1.69E-46 |
MS.gene058625 | MS.gene70189 | 0.82614 | 3.19E-54 | -1.69E-46 |
MS.gene058829 | MS.gene70189 | 0.803822 | 2.90E-49 | -1.69E-46 |
MS.gene059789 | MS.gene70189 | 0.804004 | 2.66E-49 | -1.69E-46 |
MS.gene060137 | MS.gene70189 | -0.814463 | 1.52E-51 | -1.69E-46 |
MS.gene060322 | MS.gene70189 | 0.821652 | 3.60E-53 | -1.69E-46 |
MS.gene060683 | MS.gene70189 | 0.800383 | 1.48E-48 | -1.69E-46 |
MS.gene060685 | MS.gene70189 | 0.803338 | 3.66E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene70189 | MS.gene53744 | PPI |
MS.gene70189 | MS.gene037917 | PPI |
MS.gene41316 | MS.gene70189 | PPI |
MS.gene53734 | MS.gene70189 | PPI |
MS.gene037929 | MS.gene70189 | PPI |
MS.gene43341 | MS.gene70189 | PPI |
MS.gene43330 | MS.gene70189 | PPI |
MS.gene41299 | MS.gene70189 | PPI |
MS.gene70189 | MS.gene037928 | PPI |
MS.gene70189 | MS.gene53743 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70189.t1 | MTR_8g094180 | 97.087 | 309 | 4 | 1 | 26 | 329 | 54 | 362 | 0.0 | 625 |
MS.gene70189.t1 | MTR_8g094180 | 98.092 | 262 | 5 | 0 | 26 | 287 | 54 | 315 | 0.0 | 541 |
MS.gene70189.t1 | MTR_2g024120 | 56.135 | 326 | 139 | 4 | 21 | 345 | 55 | 377 | 3.75e-132 | 382 |
MS.gene70189.t1 | MTR_2g037600 | 38.486 | 317 | 157 | 10 | 21 | 328 | 99 | 386 | 4.21e-61 | 201 |
MS.gene70189.t1 | MTR_4g127550 | 37.942 | 311 | 156 | 10 | 26 | 328 | 106 | 387 | 2.30e-59 | 196 |
MS.gene70189.t1 | MTR_1g016880 | 39.159 | 309 | 139 | 10 | 27 | 330 | 106 | 370 | 1.27e-57 | 191 |
MS.gene70189.t1 | MTR_2g037620 | 38.065 | 310 | 155 | 7 | 27 | 328 | 97 | 377 | 1.40e-56 | 189 |
MS.gene70189.t1 | MTR_5g055480 | 36.808 | 307 | 146 | 9 | 24 | 326 | 119 | 381 | 8.16e-54 | 182 |
MS.gene70189.t1 | MTR_1g110290 | 36.156 | 307 | 147 | 9 | 27 | 328 | 124 | 386 | 4.46e-51 | 175 |
MS.gene70189.t1 | MTR_1g009960 | 34.615 | 312 | 162 | 9 | 27 | 327 | 111 | 391 | 1.18e-50 | 174 |
MS.gene70189.t1 | MTR_5g006930 | 37.049 | 305 | 144 | 11 | 27 | 326 | 116 | 377 | 1.27e-50 | 173 |
MS.gene70189.t1 | MTR_2g005350 | 37.013 | 308 | 148 | 10 | 27 | 330 | 168 | 433 | 3.01e-50 | 173 |
MS.gene70189.t1 | MTR_6g083830 | 37.459 | 307 | 140 | 11 | 27 | 326 | 149 | 410 | 5.07e-50 | 172 |
MS.gene70189.t1 | MTR_8g015500 | 35.948 | 306 | 150 | 8 | 27 | 328 | 143 | 406 | 1.00e-48 | 169 |
MS.gene70189.t1 | MTR_3g108740 | 34.185 | 313 | 164 | 9 | 27 | 328 | 92 | 373 | 3.90e-48 | 166 |
MS.gene70189.t1 | MTR_5g006920 | 36.066 | 305 | 147 | 10 | 27 | 326 | 151 | 412 | 7.16e-47 | 164 |
MS.gene70189.t1 | MTR_1g009960 | 35.424 | 271 | 138 | 7 | 27 | 291 | 111 | 350 | 1.69e-45 | 159 |
MS.gene70189.t1 | MTR_3g104840 | 33.555 | 301 | 138 | 9 | 24 | 321 | 138 | 379 | 3.06e-43 | 154 |
MS.gene70189.t1 | MTR_3g106930 | 28.431 | 306 | 178 | 9 | 28 | 326 | 95 | 366 | 3.63e-27 | 110 |
MS.gene70189.t1 | MTR_1g031060 | 29.102 | 323 | 162 | 10 | 26 | 328 | 79 | 354 | 3.97e-27 | 110 |
MS.gene70189.t1 | MTR_2g087610 | 30.503 | 318 | 147 | 11 | 28 | 317 | 78 | 349 | 3.36e-23 | 99.4 |
MS.gene70189.t1 | MTR_1g048320 | 27.469 | 324 | 168 | 12 | 24 | 328 | 61 | 336 | 2.05e-21 | 94.0 |
MS.gene70189.t1 | MTR_1g031080 | 27.640 | 322 | 151 | 12 | 32 | 328 | 20 | 284 | 9.36e-20 | 88.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70189.t1 | AT5G14550 | 76.299 | 308 | 73 | 0 | 24 | 331 | 61 | 368 | 0.0 | 509 |
MS.gene70189.t1 | AT5G14550 | 76.898 | 303 | 70 | 0 | 24 | 326 | 61 | 363 | 0.0 | 507 |
MS.gene70189.t1 | AT5G14550 | 70.779 | 308 | 63 | 1 | 24 | 331 | 61 | 341 | 4.16e-161 | 454 |
MS.gene70189.t1 | AT5G14550 | 72.137 | 262 | 60 | 1 | 24 | 285 | 61 | 309 | 2.01e-142 | 407 |
MS.gene70189.t1 | AT1G11940 | 55.375 | 307 | 133 | 3 | 22 | 327 | 68 | 371 | 3.50e-122 | 357 |
MS.gene70189.t1 | AT1G62305 | 54.717 | 318 | 139 | 5 | 19 | 335 | 60 | 373 | 5.80e-121 | 353 |
MS.gene70189.t1 | AT1G62305 | 50.314 | 318 | 129 | 6 | 19 | 335 | 60 | 349 | 1.56e-103 | 308 |
MS.gene70189.t1 | AT1G62305 | 58.257 | 218 | 87 | 4 | 19 | 235 | 60 | 274 | 1.61e-81 | 251 |
MS.gene70189.t1 | AT1G11940 | 60.109 | 183 | 72 | 1 | 22 | 203 | 68 | 250 | 7.40e-76 | 235 |
MS.gene70189.t1 | AT4G31350 | 36.859 | 312 | 160 | 7 | 25 | 328 | 86 | 368 | 7.18e-59 | 194 |
MS.gene70189.t1 | AT4G31350 | 36.859 | 312 | 160 | 7 | 25 | 328 | 86 | 368 | 7.18e-59 | 194 |
MS.gene70189.t1 | AT4G31350 | 36.859 | 312 | 160 | 7 | 25 | 328 | 86 | 368 | 7.18e-59 | 194 |
MS.gene70189.t1 | AT5G57270 | 38.558 | 319 | 147 | 11 | 25 | 328 | 95 | 379 | 4.15e-58 | 193 |
MS.gene70189.t1 | AT5G57270 | 38.558 | 319 | 147 | 11 | 25 | 328 | 95 | 379 | 4.15e-58 | 193 |
MS.gene70189.t1 | AT5G57270 | 38.558 | 319 | 147 | 11 | 25 | 328 | 95 | 379 | 4.15e-58 | 193 |
MS.gene70189.t1 | AT5G57270 | 38.558 | 319 | 147 | 11 | 25 | 328 | 95 | 379 | 4.15e-58 | 193 |
MS.gene70189.t1 | AT5G57270 | 38.558 | 319 | 147 | 11 | 25 | 328 | 95 | 379 | 4.15e-58 | 193 |
MS.gene70189.t1 | AT1G10280 | 36.538 | 312 | 150 | 9 | 24 | 330 | 139 | 407 | 1.23e-55 | 187 |
MS.gene70189.t1 | AT4G31350 | 35.897 | 312 | 158 | 7 | 25 | 328 | 86 | 363 | 8.74e-55 | 184 |
MS.gene70189.t1 | AT1G73810 | 38.816 | 304 | 140 | 10 | 28 | 326 | 147 | 409 | 1.59e-54 | 184 |
MS.gene70189.t1 | AT1G68390 | 33.876 | 307 | 158 | 7 | 27 | 329 | 137 | 402 | 6.39e-53 | 180 |
MS.gene70189.t1 | AT2G19160 | 36.218 | 312 | 157 | 9 | 28 | 328 | 106 | 386 | 1.83e-52 | 178 |
MS.gene70189.t1 | AT2G19160 | 36.218 | 312 | 157 | 9 | 28 | 328 | 106 | 386 | 1.83e-52 | 178 |
MS.gene70189.t1 | AT4G25870 | 35.783 | 313 | 158 | 11 | 28 | 328 | 99 | 380 | 1.82e-50 | 173 |
MS.gene70189.t1 | AT5G11730 | 36.039 | 308 | 146 | 10 | 27 | 328 | 117 | 379 | 3.95e-50 | 172 |
MS.gene70189.t1 | AT1G51770 | 35.948 | 306 | 149 | 8 | 27 | 328 | 123 | 385 | 7.83e-50 | 172 |
MS.gene70189.t1 | AT5G16170 | 36.275 | 306 | 153 | 8 | 28 | 329 | 136 | 403 | 1.42e-49 | 171 |
MS.gene70189.t1 | AT4G30060 | 34.295 | 312 | 163 | 9 | 28 | 328 | 109 | 389 | 2.08e-48 | 168 |
MS.gene70189.t1 | AT4G30060 | 34.295 | 312 | 163 | 9 | 28 | 328 | 109 | 389 | 2.08e-48 | 168 |
MS.gene70189.t1 | AT1G10880 | 34.007 | 297 | 151 | 7 | 24 | 317 | 114 | 368 | 3.50e-48 | 167 |
MS.gene70189.t1 | AT3G21310 | 35.831 | 307 | 148 | 10 | 27 | 328 | 114 | 376 | 8.66e-46 | 160 |
MS.gene70189.t1 | AT3G21310 | 35.831 | 307 | 148 | 10 | 27 | 328 | 114 | 376 | 8.66e-46 | 160 |
MS.gene70189.t1 | AT1G68380 | 35.948 | 306 | 149 | 10 | 27 | 328 | 123 | 385 | 1.58e-45 | 160 |
MS.gene70189.t1 | AT5G25970 | 34.740 | 308 | 150 | 10 | 27 | 328 | 118 | 380 | 5.64e-44 | 155 |
MS.gene70189.t1 | AT5G25970 | 34.740 | 308 | 150 | 10 | 27 | 328 | 118 | 380 | 5.64e-44 | 155 |
MS.gene70189.t1 | AT5G25970 | 34.740 | 308 | 150 | 10 | 27 | 328 | 118 | 380 | 5.64e-44 | 155 |
MS.gene70189.t1 | AT1G51770 | 31.788 | 302 | 140 | 8 | 27 | 328 | 123 | 358 | 2.87e-35 | 132 |
MS.gene70189.t1 | AT5G25330 | 30.128 | 312 | 171 | 8 | 28 | 329 | 81 | 355 | 4.81e-33 | 126 |
MS.gene70189.t1 | AT4G32290 | 29.582 | 311 | 177 | 9 | 28 | 328 | 93 | 371 | 4.62e-28 | 113 |
MS.gene70189.t1 | AT3G52060 | 28.904 | 301 | 159 | 10 | 27 | 318 | 74 | 328 | 1.04e-27 | 111 |
MS.gene70189.t1 | AT5G22070 | 29.231 | 325 | 153 | 12 | 24 | 318 | 67 | 344 | 2.92e-25 | 105 |
MS.gene70189.t1 | AT3G21310 | 41.135 | 141 | 75 | 4 | 27 | 163 | 114 | 250 | 8.22e-24 | 99.0 |
Find 61 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAAGCCGCTACCCGAATTT+TGG | 0.189280 | 4.1:-8053702 | MS.gene70189:CDS |
TGGTTTGGGATGCATTCTTT+AGG | 0.289253 | 4.1:-8057278 | MS.gene70189:CDS |
TCTTCCCAAATCTAGCAAAA+AGG | 0.291604 | 4.1:-8053164 | MS.gene70189:intron |
GCTTCCTTTGGAATTGGTTT+GGG | 0.305701 | 4.1:-8057292 | MS.gene70189:CDS |
GGTTTGGGATGCATTCTTTA+GGG | 0.307058 | 4.1:-8057277 | MS.gene70189:intron |
TTGGTGGTGGTGCTTTGTTT+TGG | 0.307690 | 4.1:-8057435 | MS.gene70189:CDS |
GATGCTTATTAAATTTATAA+AGG | 0.310256 | 4.1:-8053021 | MS.gene70189:intron |
GACTTGATCCCTCCAAAATT+CGG | 0.318399 | 4.1:+8053690 | None:intergenic |
GGCTTCCTTTGGAATTGGTT+TGG | 0.319839 | 4.1:-8057293 | MS.gene70189:CDS |
TAGTAAACTTTCTTGCAAAA+AGG | 0.331608 | 4.1:+8052421 | None:intergenic |
TACAACCTTGGCATGCTTCC+TGG | 0.336465 | 4.1:+8054042 | None:intergenic |
ATGAAGAGAAAAGCAATCTT+AGG | 0.355547 | 4.1:+8057327 | None:intergenic |
TGCAAGGAATAGGCTTCCTT+TGG | 0.360242 | 4.1:-8057304 | MS.gene70189:CDS |
TCCACGGCGCTCACGATCTC+TGG | 0.364508 | 4.1:+8053082 | None:intergenic |
CAGTTATAGACTGGAATAAC+TGG | 0.365025 | 4.1:+8054214 | None:intergenic |
CAGTTATTCCAGTCTATAAC+TGG | 0.365399 | 4.1:-8054213 | MS.gene70189:CDS |
GAATAGGCTTCCTTTGGAAT+TGG | 0.368624 | 4.1:-8057298 | MS.gene70189:CDS |
TTCTCTTCATTGCAAGGAAT+AGG | 0.401929 | 4.1:-8057314 | MS.gene70189:CDS |
GTTTGAACATAGTGTTCATC+TGG | 0.409473 | 4.1:+8053404 | None:intergenic |
AAAACAAAGCGGTCATTTAG+AGG | 0.415697 | 4.1:+8055155 | None:intergenic |
TGCTTGTACACCATTCTCTT+CGG | 0.432521 | 4.1:+8052466 | None:intergenic |
TGGTATACAGTTGTGGATCT+TGG | 0.438795 | 4.1:+8053424 | None:intergenic |
CCAGTCTATAACTGGAGAAA+AGG | 0.444598 | 4.1:-8054205 | MS.gene70189:CDS |
GTGTAGCTGAAGTTGTATAA+AGG | 0.444599 | 4.1:+8054618 | None:intergenic |
ACTTGATCCCTCCAAAATTC+GGG | 0.445648 | 4.1:+8053691 | None:intergenic |
TTACTAGGACTGCTGCTTTG+AGG | 0.451390 | 4.1:-8052404 | MS.gene70189:CDS |
ACACTATGTTCAAACATTGC+TGG | 0.459415 | 4.1:-8053396 | MS.gene70189:CDS |
TGCAGTGGGCTGTTCTGACC+AGG | 0.465429 | 4.1:-8054060 | MS.gene70189:intron |
TGCTTTGAGGCTTCTTAACA+TGG | 0.485012 | 4.1:-8052391 | MS.gene70189:intron |
TAACTGGAGAAAAGGATCTC+AGG | 0.488468 | 4.1:-8054197 | MS.gene70189:intron |
TTTATAAATTTAATAAGCAT+CGG | 0.496105 | 4.1:+8053023 | None:intergenic |
TACAGCTTCGCTGACACAAA+AGG | 0.500980 | 4.1:-8054262 | MS.gene70189:intron |
TGGATCTTGGACGTGTCAGC+AGG | 0.503820 | 4.1:+8053437 | None:intergenic |
GCGCTCACGATCTCTGGAGT+TGG | 0.504969 | 4.1:+8053088 | None:intergenic |
ATCGTCCTCCACTACAACCT+TGG | 0.509580 | 4.1:+8054030 | None:intergenic |
TCCCTCCAAAATTCGGGTAG+CGG | 0.515418 | 4.1:+8053697 | None:intergenic |
TCTGAGAACTTATAAGTCAC+TGG | 0.518003 | 4.1:+8053053 | None:intergenic |
TCAAGTTAATGATAGCATAC+AGG | 0.530790 | 4.1:-8056090 | MS.gene70189:intron |
GCCAGGGTTTGTGTTGAATG+AGG | 0.535969 | 4.1:-8056144 | MS.gene70189:CDS |
GGGTGAAGCAAGCATGATAG+AGG | 0.536814 | 4.1:-8055213 | MS.gene70189:CDS |
TCAGCAGAAATGGAAGAAGA+AGG | 0.538184 | 4.1:-8057472 | None:intergenic |
AAGAGAATGGTGTACAAGCA+AGG | 0.546374 | 4.1:-8052463 | MS.gene70189:CDS |
GAAGCATGCCAAGGTTGTAG+TGG | 0.562145 | 4.1:-8054038 | MS.gene70189:CDS |
TTCAACACAAACCCTGGCCT+AGG | 0.569608 | 4.1:+8056149 | None:intergenic |
GTTCATCTGGTATACAGTTG+TGG | 0.575948 | 4.1:+8053417 | None:intergenic |
GCCTCATTCAACACAAACCC+TGG | 0.577011 | 4.1:+8056143 | None:intergenic |
ATGTCTAAGTAAAATGCGCT+CGG | 0.580748 | 4.1:+8055190 | None:intergenic |
GATCAGTGACACATACTGCA+TGG | 0.596005 | 4.1:-8053118 | MS.gene70189:CDS |
GTTTGTTGTTTATGCAGATG+CGG | 0.596175 | 4.1:-8057410 | MS.gene70189:intron |
ATCAGTGACACATACTGCAT+GGG | 0.597196 | 4.1:-8053117 | MS.gene70189:CDS |
AGAGAATGGTGTACAAGCAA+GGG | 0.597758 | 4.1:-8052462 | MS.gene70189:CDS |
GAGATCGTGAGCGCCGTGGA+TGG | 0.599731 | 4.1:-8053079 | MS.gene70189:CDS |
GCATGCCAAGGTTGTAGTGG+AGG | 0.609985 | 4.1:-8054035 | MS.gene70189:CDS |
AGACTGAATACCGAAGAGAA+TGG | 0.627600 | 4.1:-8052476 | MS.gene70189:CDS |
AAGTCACTGGATGCCATCCA+CGG | 0.632825 | 4.1:+8053066 | None:intergenic |
GCATCCCAAACCAATTCCAA+AGG | 0.633005 | 4.1:+8057288 | None:intergenic |
TCCAGAGATCGTGAGCGCCG+TGG | 0.637645 | 4.1:-8053083 | MS.gene70189:CDS |
TCTGACCAGGAAGCATGCCA+AGG | 0.656062 | 4.1:-8054047 | MS.gene70189:CDS |
TATACCCTCACCTATCTGAG+AGG | 0.685286 | 4.1:+8055132 | None:intergenic |
AGCTTCGCTGACACAAAAGG+AGG | 0.705360 | 4.1:-8054259 | MS.gene70189:CDS |
TATCTGAGAGGAAAACAAAG+CGG | 0.756541 | 4.1:+8055144 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATAAATTTAATAAGCAT+CGG | + | chr4.1:8056143-8056162 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTTTTGTTGT+AGG | - | chr4.1:8056643-8056662 | MS.gene70189:intron | 10.0% |
!! | AAATCATTATTACAAAAAAG+AGG | + | chr4.1:8052710-8052729 | None:intergenic | 15.0% |
!! | AAATGAATAAATAACTACAA+AGG | + | chr4.1:8054842-8054861 | None:intergenic | 15.0% |
!! | AATTATTAGAAATGTTGTAA+TGG | + | chr4.1:8052759-8052778 | None:intergenic | 15.0% |
!! | ATTAAGTTTATCAATGTAAA+GGG | + | chr4.1:8052477-8052496 | None:intergenic | 15.0% |
!! | ATTTAACAAAACTAATTGTT+GGG | + | chr4.1:8054771-8054790 | None:intergenic | 15.0% |
!! | CAAAAAATAAATAACAATCT+CGG | + | chr4.1:8057146-8057165 | None:intergenic | 15.0% |
!! | GATAAAAATAAGAAACTATT+TGG | - | chr4.1:8053265-8053284 | MS.gene70189:intron | 15.0% |
!! | GATGCTTATTAAATTTATAA+AGG | - | chr4.1:8056142-8056161 | MS.gene70189:CDS | 15.0% |
!! | TATATAAACTAATAAAAGCA+AGG | - | chr4.1:8056369-8056388 | MS.gene70189:intron | 15.0% |
!! | TATATAATGATTGAAGTTTA+TGG | + | chr4.1:8054070-8054089 | None:intergenic | 15.0% |
!! | TATTAAGTTTATCAATGTAA+AGG | + | chr4.1:8052478-8052497 | None:intergenic | 15.0% |
!! | TATTTAACAAAACTAATTGT+TGG | + | chr4.1:8054772-8054791 | None:intergenic | 15.0% |
!!! | AACTATTATTTTCTATAAAG+AGG | + | chr4.1:8057464-8057483 | None:intergenic | 15.0% |
!!! | ACTATTATTTTCTATAAAGA+GGG | + | chr4.1:8057463-8057482 | None:intergenic | 15.0% |
!!! | ATTAAGATTCAGATTTTATT+AGG | + | chr4.1:8056441-8056460 | None:intergenic | 15.0% |
!!! | TAATAGTAGTTTTTACTTTT+TGG | - | chr4.1:8052493-8052512 | MS.gene70189:CDS | 15.0% |
!!! | TAATTAACATTTTGTTAGAA+TGG | - | chr4.1:8056278-8056297 | MS.gene70189:intron | 15.0% |
!!! | TTGAAATAATCTCATTTTAT+CGG | - | chr4.1:8053770-8053789 | MS.gene70189:intron | 15.0% |
!!! | TTTCTCTTTATAGTTTTTTT+AGG | + | chr4.1:8053213-8053232 | None:intergenic | 15.0% |
!!! | TTTTGTTTCTATTTGTTTTT+TGG | - | chr4.1:8051936-8051955 | MS.gene70189:intron | 15.0% |
!! | AAAAATATTAAAGCAAAACC+AGG | + | chr4.1:8055963-8055982 | None:intergenic | 20.0% |
!! | AAAATATTAAAGCAAAACCA+GGG | + | chr4.1:8055962-8055981 | None:intergenic | 20.0% |
!! | AACTATTTGGTAGAATATTA+TGG | - | chr4.1:8053278-8053297 | MS.gene70189:intron | 20.0% |
!! | AATAATAAGGTTATCATACT+AGG | - | chr4.1:8056227-8056246 | MS.gene70189:intron | 20.0% |
!! | AGATTAATGTCGTATATATA+TGG | + | chr4.1:8054666-8054685 | None:intergenic | 20.0% |
!! | ATGGCTTAAAAAATACTAAA+TGG | + | chr4.1:8055373-8055392 | None:intergenic | 20.0% |
!! | CAAATAATAAATGAAGCAAA+AGG | + | chr4.1:8055282-8055301 | None:intergenic | 20.0% |
!! | GGTTTCAAAAAAATTTAGTT+TGG | + | chr4.1:8054258-8054277 | None:intergenic | 20.0% |
!! | TATTGTTTGAATTCATCTTT+AGG | + | chr4.1:8056327-8056346 | None:intergenic | 20.0% |
!! | TTCAATATTTCATTCTGAAT+TGG | - | chr4.1:8055621-8055640 | MS.gene70189:intron | 20.0% |
!! | TTCATTCTGTGATAATAATA+AGG | - | chr4.1:8056214-8056233 | MS.gene70189:intron | 20.0% |
!! | TTGAGTTATTTATCTAAACA+AGG | - | chr4.1:8057112-8057131 | MS.gene70189:intron | 20.0% |
!! | TTGTTTATGGTAAGATAATA+TGG | - | chr4.1:8052408-8052427 | MS.gene70189:CDS | 20.0% |
!!! | AAATGAAATTTGTTAGTAGA+AGG | - | chr4.1:8052207-8052226 | MS.gene70189:intron | 20.0% |
!!! | AACATTTATATTGCATTTTC+AGG | - | chr4.1:8052959-8052978 | MS.gene70189:intron | 20.0% |
!!! | AATGTTTCAAAAATTTTGCA+AGG | - | chr4.1:8055167-8055186 | MS.gene70189:CDS | 20.0% |
!!! | ACATTTATATTGCATTTTCA+GGG | - | chr4.1:8052960-8052979 | MS.gene70189:intron | 20.0% |
!!! | AGATCATTTTTTAGTTTCTT+CGG | - | chr4.1:8056863-8056882 | MS.gene70189:intron | 20.0% |
!!! | ATGTTAGTGGTTATTTTATT+AGG | - | chr4.1:8052181-8052200 | MS.gene70189:intron | 20.0% |
!!! | CAAAAAAATTTAGTTTGGTA+CGG | + | chr4.1:8054253-8054272 | None:intergenic | 20.0% |
!!! | CTTATTTTTATAAGCTATTC+TGG | - | chr4.1:8053479-8053498 | MS.gene70189:intron | 20.0% |
!!! | TGAGCTTTCAAATATTTTTA+CGG | - | chr4.1:8056834-8056853 | MS.gene70189:intron | 20.0% |
!!! | TGTTAGTGGTTATTTTATTA+GGG | - | chr4.1:8052182-8052201 | MS.gene70189:intron | 20.0% |
!!! | TTGCAAAATTTTTGAAACAT+TGG | + | chr4.1:8055168-8055187 | None:intergenic | 20.0% |
!!! | TTGGGTTTTATAACATTTAA+TGG | + | chr4.1:8055342-8055361 | None:intergenic | 20.0% |
!!! | TTTATTTTTTGATTCTCTGT+TGG | - | chr4.1:8057155-8057174 | MS.gene70189:intron | 20.0% |
! | AAAAAAACAAAAAACTGAGC+TGG | - | chr4.1:8054350-8054369 | MS.gene70189:intron | 25.0% |
! | AAATAAGCTGATAACAACTT+AGG | + | chr4.1:8053466-8053485 | None:intergenic | 25.0% |
! | AACATATGGTCAATAAGTTA+AGG | + | chr4.1:8052793-8052812 | None:intergenic | 25.0% |
! | AAGCTATTCTGGATAATTTA+TGG | - | chr4.1:8053490-8053509 | MS.gene70189:intron | 25.0% |
! | AAGTCAAACTTCTTTCATAT+AGG | + | chr4.1:8053529-8053548 | None:intergenic | 25.0% |
! | AATAAGCTGATAACAACTTA+GGG | + | chr4.1:8053465-8053484 | None:intergenic | 25.0% |
! | ACTGAATTGTTCATAAAGTT+TGG | - | chr4.1:8054146-8054165 | MS.gene70189:intron | 25.0% |
! | ACTTTATGAACAATTCAGTT+CGG | + | chr4.1:8054145-8054164 | None:intergenic | 25.0% |
! | AGAAGAATTCATACAAAGAT+AGG | + | chr4.1:8055084-8055103 | None:intergenic | 25.0% |
! | ATAAGTGCTTATCATATAAG+TGG | + | chr4.1:8057077-8057096 | None:intergenic | 25.0% |
! | ATACAAAGATAGGTATAAGA+TGG | + | chr4.1:8055074-8055093 | None:intergenic | 25.0% |
! | ATACTAAATGGAAGAAAGAT+TGG | + | chr4.1:8055361-8055380 | None:intergenic | 25.0% |
! | ATGGTAAGTTCATATATCAT+AGG | - | chr4.1:8056791-8056810 | MS.gene70189:intron | 25.0% |
! | ATTAATCTGTTTATCCAAAC+AGG | - | chr4.1:8053598-8053617 | MS.gene70189:intron | 25.0% |
! | CAATCAACTGAAATATAGTA+AGG | + | chr4.1:8054505-8054524 | None:intergenic | 25.0% |
! | CTAACATTTGCCTATAAAAA+AGG | + | chr4.1:8052168-8052187 | None:intergenic | 25.0% |
! | CTTATATTATGTGTCTCAAT+TGG | - | chr4.1:8055202-8055221 | MS.gene70189:CDS | 25.0% |
! | GACATAACTGTGTATTTAAA+AGG | + | chr4.1:8052568-8052587 | None:intergenic | 25.0% |
! | TACTAAATGGAAGAAAGATT+GGG | + | chr4.1:8055360-8055379 | None:intergenic | 25.0% |
! | TACTTAGTAAAGAAGTAAGA+TGG | - | chr4.1:8057256-8057275 | MS.gene70189:intron | 25.0% |
! | TAGTAAACTTTCTTGCAAAA+AGG | + | chr4.1:8056745-8056764 | None:intergenic | 25.0% |
! | TATATATGCTGATATGTAGT+AGG | + | chr4.1:8056355-8056374 | None:intergenic | 25.0% |
! | TGAAACAAAACTGATAACTA+GGG | - | chr4.1:8054377-8054396 | MS.gene70189:intron | 25.0% |
! | TGGTAAGTTCATATATCATA+GGG | - | chr4.1:8056792-8056811 | MS.gene70189:intron | 25.0% |
! | TTAACTGAAATCTCCTAAAA+CGG | + | chr4.1:8057186-8057205 | None:intergenic | 25.0% |
! | TTAATCTGTTTATCCAAACA+GGG | - | chr4.1:8053599-8053618 | MS.gene70189:intron | 25.0% |
! | TTCCATAATAATTTAGCCAA+AGG | + | chr4.1:8052826-8052845 | None:intergenic | 25.0% |
! | TTGAGACACATAATATAAGA+AGG | + | chr4.1:8055201-8055220 | None:intergenic | 25.0% |
!! | AACAGTTCTAATATTCGATT+TGG | + | chr4.1:8054327-8054346 | None:intergenic | 25.0% |
!! | ATGTTGACTAAATATCATGA+AGG | + | chr4.1:8053909-8053928 | None:intergenic | 25.0% |
!! | TTCTTCTGACATTTTAAACA+TGG | + | chr4.1:8053838-8053857 | None:intergenic | 25.0% |
!! | TTTTTATAGGCAAATGTTAG+TGG | - | chr4.1:8052168-8052187 | MS.gene70189:intron | 25.0% |
!! | TTTTTGCAAGAAAGTTTACT+AGG | - | chr4.1:8056744-8056763 | MS.gene70189:intron | 25.0% |
!!! | GTTAGTGGTTATTTTATTAG+GGG | - | chr4.1:8052183-8052202 | MS.gene70189:intron | 25.0% |
!!! | GTTGATGTTACCTTTTTTAT+AGG | - | chr4.1:8052155-8052174 | MS.gene70189:intron | 25.0% |
!!! | TAGTTATCAGTTTTGTTTCA+CGG | + | chr4.1:8054377-8054396 | None:intergenic | 25.0% |
!!! | TTAGTGGTTATTTTATTAGG+GGG | - | chr4.1:8052184-8052203 | MS.gene70189:intron | 25.0% |
!!! | TTCTAATATTCGATTTGGTT+CGG | + | chr4.1:8054322-8054341 | None:intergenic | 25.0% |
!!! | TTCTTAGTCTTGTTAAATAG+CGG | - | chr4.1:8056562-8056581 | MS.gene70189:intron | 25.0% |
AAATACACAGTTATGTCCTT+TGG | - | chr4.1:8052571-8052590 | MS.gene70189:intron | 30.0% | |
AAGAGACAAGCACAAATATA+TGG | + | chr4.1:8055392-8055411 | None:intergenic | 30.0% | |
AATACACAGTTATGTCCTTT+GGG | - | chr4.1:8052572-8052591 | MS.gene70189:intron | 30.0% | |
AGACACATAATATAAGAAGG+AGG | + | chr4.1:8055198-8055217 | None:intergenic | 30.0% | |
AGACTATAGAACTTCATAGT+TGG | + | chr4.1:8053664-8053683 | None:intergenic | 30.0% | |
AGATCTAGAGATTAATGAGT+TGG | - | chr4.1:8053243-8053262 | MS.gene70189:intron | 30.0% | |
ATAAGCTGTTATAGTTGACT+AGG | - | chr4.1:8053177-8053196 | MS.gene70189:intron | 30.0% | |
ATCTTTCATTAGTTGACTGA+TGG | + | chr4.1:8056472-8056491 | None:intergenic | 30.0% | |
ATGAAGAGAAAAGCAATCTT+AGG | + | chr4.1:8051839-8051858 | None:intergenic | 30.0% | |
ATTGGTACATGATGTCAATT+AGG | - | chr4.1:8055639-8055658 | MS.gene70189:intron | 30.0% | |
CACCTTTGGCTAAATTATTA+TGG | - | chr4.1:8052821-8052840 | MS.gene70189:intron | 30.0% | |
CATGTGATAAATAAACACAC+AGG | + | chr4.1:8053695-8053714 | None:intergenic | 30.0% | |
CATGTGTTCATATAATTCCT+AGG | + | chr4.1:8055667-8055686 | None:intergenic | 30.0% | |
CCATACGTTGCTTAATTATA+TGG | - | chr4.1:8054434-8054453 | MS.gene70189:intron | 30.0% | |
CCATATAATTAAGCAACGTA+TGG | + | chr4.1:8054437-8054456 | None:intergenic | 30.0% | |
GAGATTGAATAAGAGAACTT+AGG | - | chr4.1:8053420-8053439 | MS.gene70189:CDS | 30.0% | |
GTGAAACAAAACTGATAACT+AGG | - | chr4.1:8054376-8054395 | MS.gene70189:intron | 30.0% | |
TAATCTGTTTATCCAAACAG+GGG | - | chr4.1:8053600-8053619 | MS.gene70189:intron | 30.0% | |
TATTGTTACATTCCTTTCCT+TGG | - | chr4.1:8053625-8053644 | MS.gene70189:intron | 30.0% | |
TCAAGTTAATGATAGCATAC+AGG | - | chr4.1:8053073-8053092 | MS.gene70189:CDS | 30.0% | |
TTAAAAGCTAGCTATCAAGA+GGG | + | chr4.1:8052653-8052672 | None:intergenic | 30.0% | |
! | AAAACCATGAGAGTATATGA+TGG | + | chr4.1:8055306-8055325 | None:intergenic | 30.0% |
! | ATCTGGAAAAAGAAGCATAT+AGG | + | chr4.1:8052086-8052105 | None:intergenic | 30.0% |
! | ATCTTTTTGCAGATAGATTG+GGG | - | chr4.1:8053930-8053949 | MS.gene70189:intron | 30.0% |
! | ATTCAGATTTTATTAGGAGC+AGG | + | chr4.1:8056435-8056454 | None:intergenic | 30.0% |
! | GATCTTTTTGCAGATAGATT+GGG | - | chr4.1:8053929-8053948 | MS.gene70189:intron | 30.0% |
! | TGATCTTTTTGCAGATAGAT+TGG | - | chr4.1:8053928-8053947 | MS.gene70189:intron | 30.0% |
! | TTGTTGTTGTAGTTGACTTA+GGG | - | chr4.1:8053349-8053368 | MS.gene70189:intron | 30.0% |
! | TTTAGTTTCTTCGGTTTGAT+TGG | - | chr4.1:8056872-8056891 | MS.gene70189:intron | 30.0% |
!! | GAAGGTTTTTGCTTTGATTT+TGG | - | chr4.1:8051709-8051728 | MS.gene70189:CDS | 30.0% |
!! | GAATGGTACTTGATAATGAT+AGG | - | chr4.1:8056295-8056314 | MS.gene70189:intron | 30.0% |
!! | TTTATATTGCATTTTCAGGG+AGG | - | chr4.1:8052963-8052982 | MS.gene70189:intron | 30.0% |
AAAACAAAGCGGTCATTTAG+AGG | + | chr4.1:8054011-8054030 | None:intergenic | 35.0% | |
AAACCAAATGATTCTTTGCG+AGG | - | chr4.1:8054273-8054292 | MS.gene70189:intron | 35.0% | |
AAAGTCGAACTGTGTTTCAT+AGG | + | chr4.1:8057018-8057037 | None:intergenic | 35.0% | |
AAATGTTGTAATGGCAAGTG+AGG | + | chr4.1:8052750-8052769 | None:intergenic | 35.0% | |
AACAAAATGCTTATTGCCAG+TGG | - | chr4.1:8057209-8057228 | MS.gene70189:intron | 35.0% | |
AAGAGGAATATTACGAACGA+GGG | + | chr4.1:8052246-8052265 | None:intergenic | 35.0% | |
AAGGTGAGTCTCTTAACATA+TGG | + | chr4.1:8052807-8052826 | None:intergenic | 35.0% | |
AAGTACTCTCCACTTACTAT+AGG | - | chr4.1:8054089-8054108 | MS.gene70189:intron | 35.0% | |
ACACTATGTTCAAACATTGC+TGG | - | chr4.1:8055767-8055786 | MS.gene70189:intron | 35.0% | |
ACTTACTATAGGACTCTTCA+TGG | - | chr4.1:8054100-8054119 | MS.gene70189:intron | 35.0% | |
AGCTCTTTCAAACAGTCTAA+AGG | + | chr4.1:8056928-8056947 | None:intergenic | 35.0% | |
AGGTATAAGATGGCAATCTT+TGG | + | chr4.1:8055064-8055083 | None:intergenic | 35.0% | |
AGGTCGTTACAATCCAAAAA+TGG | - | chr4.1:8054924-8054943 | MS.gene70189:intron | 35.0% | |
AGTGTAGGGACAATTGTTTA+TGG | - | chr4.1:8052395-8052414 | MS.gene70189:CDS | 35.0% | |
ATACACAGTTATGTCCTTTG+GGG | - | chr4.1:8052573-8052592 | MS.gene70189:intron | 35.0% | |
ATCATTGATCAGTACAGTGT+AGG | - | chr4.1:8052380-8052399 | MS.gene70189:intron | 35.0% | |
ATGAAGAGTCCTATAGTAAG+TGG | + | chr4.1:8054101-8054120 | None:intergenic | 35.0% | |
ATGATGTCAATTAGGTTCCT+AGG | - | chr4.1:8055647-8055666 | MS.gene70189:intron | 35.0% | |
ATGCAATAGTGTTCACAGAA+AGG | + | chr4.1:8055810-8055829 | None:intergenic | 35.0% | |
ATGTCTAAGTAAAATGCGCT+CGG | + | chr4.1:8053976-8053995 | None:intergenic | 35.0% | |
CAGTTATAGACTGGAATAAC+TGG | + | chr4.1:8054952-8054971 | None:intergenic | 35.0% | |
CAGTTATTCCAGTCTATAAC+TGG | - | chr4.1:8054950-8054969 | MS.gene70189:intron | 35.0% | |
CATAAGATAGCAAATGGACA+TGG | + | chr4.1:8053146-8053165 | None:intergenic | 35.0% | |
CCAACACATAAGATAGCAAA+TGG | + | chr4.1:8053152-8053171 | None:intergenic | 35.0% | |
CTTAAAAGCTAGCTATCAAG+AGG | + | chr4.1:8052654-8052673 | None:intergenic | 35.0% | |
GCATTGTCGATAATAGTGAA+TGG | - | chr4.1:8052304-8052323 | MS.gene70189:intron | 35.0% | |
GTGTAGCTGAAGTTGTATAA+AGG | + | chr4.1:8054548-8054567 | None:intergenic | 35.0% | |
GTTTCAAACAAAGAGAGAAG+AGG | + | chr4.1:8053101-8053120 | None:intergenic | 35.0% | |
GTTTGAACATAGTGTTCATC+TGG | + | chr4.1:8055762-8055781 | None:intergenic | 35.0% | |
TATCTGAGAGGAAAACAAAG+CGG | + | chr4.1:8054022-8054041 | None:intergenic | 35.0% | |
TATGTTAAGAGACTCACCTT+TGG | - | chr4.1:8052807-8052826 | MS.gene70189:intron | 35.0% | |
TCATTGATCAGTACAGTGTA+GGG | - | chr4.1:8052381-8052400 | MS.gene70189:intron | 35.0% | |
TCTGAGAACTTATAAGTCAC+TGG | + | chr4.1:8056113-8056132 | None:intergenic | 35.0% | |
TGCTAGTTGTTGAAATGTTG+AGG | - | chr4.1:8052918-8052937 | MS.gene70189:intron | 35.0% | |
TGCTCGATTGAGTATTTAAG+CGG | - | chr4.1:8052617-8052636 | MS.gene70189:intron | 35.0% | |
TGTAACAATAAACCCCTGTT+TGG | + | chr4.1:8053615-8053634 | None:intergenic | 35.0% | |
TGTATGAATTCTTCTGCAGT+GGG | - | chr4.1:8055089-8055108 | MS.gene70189:intron | 35.0% | |
TGTTATAGTTGACTAGGTAG+AGG | - | chr4.1:8053183-8053202 | MS.gene70189:intron | 35.0% | |
TTCTCTTCATTGCAAGGAAT+AGG | - | chr4.1:8051849-8051868 | MS.gene70189:intron | 35.0% | |
TTGTATGAATTCTTCTGCAG+TGG | - | chr4.1:8055088-8055107 | MS.gene70189:intron | 35.0% | |
TTGTCCATCATATACTCTCA+TGG | - | chr4.1:8055299-8055318 | MS.gene70189:intron | 35.0% | |
! | AAAAGCAAGGTGTGAGATTT+TGG | - | chr4.1:8056382-8056401 | MS.gene70189:intron | 35.0% |
! | ATGATAAGCATCAAAGCACT+TGG | + | chr4.1:8052687-8052706 | None:intergenic | 35.0% |
! | ATGCGGTATACTCATGTTTT+GGG | - | chr4.1:8051770-8051789 | MS.gene70189:intron | 35.0% |
! | CAAAAGCGCAAAAGACTAAA+AGG | + | chr4.1:8052435-8052454 | None:intergenic | 35.0% |
! | GGAATAACTGGATCCATTTT+TGG | + | chr4.1:8054940-8054959 | None:intergenic | 35.0% |
! | GTTGTTGTTGTAGTTGACTT+AGG | - | chr4.1:8053348-8053367 | MS.gene70189:intron | 35.0% |
! | TCAAGAAAGTGATTTTGCAG+TGG | + | chr4.1:8056187-8056206 | None:intergenic | 35.0% |
! | TGATAAGCATCAAAGCACTT+GGG | + | chr4.1:8052686-8052705 | None:intergenic | 35.0% |
! | TTTTATTAGGAGCAGGATCA+AGG | + | chr4.1:8056428-8056447 | None:intergenic | 35.0% |
! | TTTTGCGCTTTTGTATTCTC+TGG | - | chr4.1:8052442-8052461 | MS.gene70189:CDS | 35.0% |
!! | AGTGTTACAAGTTCTGAATC+TGG | + | chr4.1:8052103-8052122 | None:intergenic | 35.0% |
!! | ATATTTTTACGTGATCACCC+TGG | - | chr4.1:8055942-8055961 | MS.gene70189:intron | 35.0% |
!! | CAGTCTAAAGGTGTTTATGT+CGG | + | chr4.1:8056916-8056935 | None:intergenic | 35.0% |
!! | CCATTTGCTATCTTATGTGT+TGG | - | chr4.1:8053149-8053168 | MS.gene70189:CDS | 35.0% |
!! | GGTTTTTGCTTTGATTTTGG+TGG | - | chr4.1:8051712-8051731 | MS.gene70189:CDS | 35.0% |
!! | GTTTGTTGTTTATGCAGATG+CGG | - | chr4.1:8051753-8051772 | MS.gene70189:intron | 35.0% |
!! | TTCGTGTTAGTTCTTTTTCG+AGG | + | chr4.1:8056025-8056044 | None:intergenic | 35.0% |
!! | TTGCTTTTCTCTTCATTGCA+AGG | - | chr4.1:8051843-8051862 | MS.gene70189:intron | 35.0% |
!! | TTTTGCTTTGATTTTGGTGG+TGG | - | chr4.1:8051715-8051734 | MS.gene70189:CDS | 35.0% |
!!! | GATAGCTAGCTTTTAAGAGA+GGG | - | chr4.1:8052657-8052676 | MS.gene70189:intron | 35.0% |
!!! | TGATAGCTAGCTTTTAAGAG+AGG | - | chr4.1:8052656-8052675 | MS.gene70189:intron | 35.0% |
AAGAGAATGGTGTACAAGCA+AGG | - | chr4.1:8056700-8056719 | MS.gene70189:intron | 40.0% | |
AATATTACGAACGAGGGTCT+AGG | + | chr4.1:8052240-8052259 | None:intergenic | 40.0% | |
ACTTGATCCCTCCAAAATTC+GGG | + | chr4.1:8055475-8055494 | None:intergenic | 40.0% | |
AGACTGAATACCGAAGAGAA+TGG | - | chr4.1:8056687-8056706 | MS.gene70189:intron | 40.0% | |
AGAGAATGGTGTACAAGCAA+GGG | - | chr4.1:8056701-8056720 | MS.gene70189:intron | 40.0% | |
AGGGATCAAGTCATTGTAAG+TGG | - | chr4.1:8055484-8055503 | MS.gene70189:intron | 40.0% | |
AGGTTATCATACTAGGAAGC+TGG | - | chr4.1:8056234-8056253 | MS.gene70189:intron | 40.0% | |
AGTCCTCGCAAAGAATCATT+TGG | + | chr4.1:8054279-8054298 | None:intergenic | 40.0% | |
ATCAGTGACACATACTGCAT+GGG | - | chr4.1:8056046-8056065 | MS.gene70189:intron | 40.0% | |
CAAGAGGAATATTACGAACG+AGG | + | chr4.1:8052247-8052266 | None:intergenic | 40.0% | |
CCAGTCTATAACTGGAGAAA+AGG | - | chr4.1:8054958-8054977 | MS.gene70189:intron | 40.0% | |
CTGTGTTTCATAGGCTATCT+TGG | + | chr4.1:8057009-8057028 | None:intergenic | 40.0% | |
GAAATGTTGAGGTGCAGTAA+CGG | - | chr4.1:8052929-8052948 | MS.gene70189:intron | 40.0% | |
GACTTGATCCCTCCAAAATT+CGG | + | chr4.1:8055476-8055495 | None:intergenic | 40.0% | |
GATTGAGTATTTAAGCGGCT+TGG | - | chr4.1:8052622-8052641 | MS.gene70189:intron | 40.0% | |
GGGGTAAACTATTAGTGGTT+TGG | + | chr4.1:8054182-8054201 | None:intergenic | 40.0% | |
GTTCATCTGGTATACAGTTG+TGG | + | chr4.1:8055749-8055768 | None:intergenic | 40.0% | |
TAACATCAACACGTCCTTGA+AGG | + | chr4.1:8052277-8052296 | None:intergenic | 40.0% | |
TAACTGGAGAAAAGGATCTC+AGG | - | chr4.1:8054966-8054985 | MS.gene70189:intron | 40.0% | |
TCCTTCTGATAGAACTTCAC+AGG | + | chr4.1:8052535-8052554 | None:intergenic | 40.0% | |
TCTTGCAAAAAGGAAGCAAG+TGG | + | chr4.1:8056735-8056754 | None:intergenic | 40.0% | |
TGCTTGTACACCATTCTCTT+CGG | + | chr4.1:8056700-8056719 | None:intergenic | 40.0% | |
TGGTATACAGTTGTGGATCT+TGG | + | chr4.1:8055742-8055761 | None:intergenic | 40.0% | |
! | AAGCTTTATCCCACTAAGTG+GGG | + | chr4.1:8053327-8053346 | None:intergenic | 40.0% |
! | CAAGCTTTATCCCACTAAGT+GGG | + | chr4.1:8053328-8053347 | None:intergenic | 40.0% |
! | CCTTTTCTCCAGTTATAGAC+TGG | + | chr4.1:8054961-8054980 | None:intergenic | 40.0% |
! | GAAATGTGCTAGAGAGCATA+AGG | + | chr4.1:8054634-8054653 | None:intergenic | 40.0% |
! | GAGGCCTTTTTGCTAGATTT+GGG | + | chr4.1:8056006-8056025 | None:intergenic | 40.0% |
! | GATGCGGTATACTCATGTTT+TGG | - | chr4.1:8051769-8051788 | MS.gene70189:intron | 40.0% |
! | GGTTTGGGATGCATTCTTTA+GGG | - | chr4.1:8051886-8051905 | MS.gene70189:intron | 40.0% |
! | GTGTGTACTTGGTGGTTAAT+AGG | - | chr4.1:8051991-8052010 | MS.gene70189:intron | 40.0% |
! | TCTCGATTTTCGTTCATCCT+AGG | - | chr4.1:8052997-8053016 | MS.gene70189:intron | 40.0% |
! | TGGTTTGGGATGCATTCTTT+AGG | - | chr4.1:8051885-8051904 | MS.gene70189:intron | 40.0% |
! | TGTACTTGGTGGTTAATAGG+AGG | - | chr4.1:8051994-8052013 | MS.gene70189:intron | 40.0% |
! | TTTTCCTCTCAGATAGGTGA+GGG | - | chr4.1:8054027-8054046 | MS.gene70189:CDS | 40.0% |
!! | AGATTCTAGTTCATCCCCAA+AGG | + | chr4.1:8052590-8052609 | None:intergenic | 40.0% |
!! | GAATAGGCTTCCTTTGGAAT+TGG | - | chr4.1:8051865-8051884 | MS.gene70189:intron | 40.0% |
!! | GCTTCCTTTGGAATTGGTTT+GGG | - | chr4.1:8051871-8051890 | MS.gene70189:intron | 40.0% |
!! | TGCTTTGAGGCTTCTTAACA+TGG | - | chr4.1:8056772-8056791 | MS.gene70189:intron | 40.0% |
!!! | CATCGACTAGTTTTGTCGAT+AGG | - | chr4.1:8054588-8054607 | MS.gene70189:CDS | 40.0% |
!!! | GCTTTGTTTTCCTCTCAGAT+AGG | - | chr4.1:8054021-8054040 | MS.gene70189:CDS | 40.0% |
ACCTACACATCAGCTTGGTT+CGG | + | chr4.1:8054208-8054227 | None:intergenic | 45.0% | |
ACTGAACCTACACATCAGCT+TGG | + | chr4.1:8054213-8054232 | None:intergenic | 45.0% | |
AGGTAACATCAACGCACTAC+CGG | + | chr4.1:8052148-8052167 | None:intergenic | 45.0% | |
ATCAACACGTCCTTGAAGGA+GGG | + | chr4.1:8052273-8052292 | None:intergenic | 45.0% | |
CCACACTTGAATCCAAGGAA+AGG | + | chr4.1:8053640-8053659 | None:intergenic | 45.0% | |
CCACTTAGTGGGATAAAGCT+TGG | - | chr4.1:8053326-8053345 | MS.gene70189:intron | 45.0% | |
CCTTTCCTTGGATTCAAGTG+TGG | - | chr4.1:8053637-8053656 | MS.gene70189:intron | 45.0% | |
CTTCATGGTTTCGTTCAGGA+GGG | - | chr4.1:8054115-8054134 | MS.gene70189:intron | 45.0% | |
GACTCTTCATGGTTTCGTTC+AGG | - | chr4.1:8054111-8054130 | MS.gene70189:intron | 45.0% | |
GATCAGTGACACATACTGCA+TGG | - | chr4.1:8056045-8056064 | MS.gene70189:intron | 45.0% | |
GATGTGTAGGTTCAGTGTAC+CGG | - | chr4.1:8054217-8054236 | MS.gene70189:CDS | 45.0% | |
GCAAAAAGGAAGCAAGTGGA+CGG | + | chr4.1:8056731-8056750 | None:intergenic | 45.0% | |
GCATCCCAAACCAATTCCAA+AGG | + | chr4.1:8051878-8051897 | None:intergenic | 45.0% | |
GCCTGTGAAGTTCTATCAGA+AGG | - | chr4.1:8052531-8052550 | MS.gene70189:intron | 45.0% | |
GGTTCGGGGTAAACTATTAG+TGG | + | chr4.1:8054187-8054206 | None:intergenic | 45.0% | |
TACAGCTTCGCTGACACAAA+AGG | - | chr4.1:8054901-8054920 | MS.gene70189:intron | 45.0% | |
TAGAATGAGACTATCGCCGT+CGG | + | chr4.1:8055420-8055439 | None:intergenic | 45.0% | |
TATACCCTCACCTATCTGAG+AGG | + | chr4.1:8054034-8054053 | None:intergenic | 45.0% | |
TCTTCATGGTTTCGTTCAGG+AGG | - | chr4.1:8054114-8054133 | MS.gene70189:intron | 45.0% | |
TGATTCTTTGCGAGGACTGT+TGG | - | chr4.1:8054281-8054300 | MS.gene70189:intron | 45.0% | |
TGCAAGGAATAGGCTTCCTT+TGG | - | chr4.1:8051859-8051878 | MS.gene70189:intron | 45.0% | |
TGTGTGTGTGTGTGTGTACT+TGG | - | chr4.1:8051980-8051999 | MS.gene70189:intron | 45.0% | |
TTGGACCACACTTGAATCCA+AGG | + | chr4.1:8053645-8053664 | None:intergenic | 45.0% | |
TTGGTACGGAACCACATAAC+CGG | + | chr4.1:8054239-8054258 | None:intergenic | 45.0% | |
TTTATCCCACTAAGTGGGGT+CGG | + | chr4.1:8053323-8053342 | None:intergenic | 45.0% | |
! | AAAAGCCGCTACCCGAATTT+TGG | - | chr4.1:8055461-8055480 | MS.gene70189:intron | 45.0% |
! | ATTTTCGTTCATCCTAGGCC+AGG | - | chr4.1:8053002-8053021 | MS.gene70189:intron | 45.0% |
! | CCAAGCTTTATCCCACTAAG+TGG | + | chr4.1:8053329-8053348 | None:intergenic | 45.0% |
! | CGAGGCCTTTTTGCTAGATT+TGG | + | chr4.1:8056007-8056026 | None:intergenic | 45.0% |
! | GCTTGTCTCTTTTATGCCGA+CGG | - | chr4.1:8055401-8055420 | MS.gene70189:intron | 45.0% |
! | GTTTTCCTCTCAGATAGGTG+AGG | - | chr4.1:8054026-8054045 | MS.gene70189:CDS | 45.0% |
! | TCTGTTGGACAGTCCGTTTT+AGG | - | chr4.1:8057170-8057189 | MS.gene70189:intron | 45.0% |
! | TTTTCGTTCATCCTAGGCCA+GGG | - | chr4.1:8053003-8053022 | MS.gene70189:intron | 45.0% |
!! | GGCTTCCTTTGGAATTGGTT+TGG | - | chr4.1:8051870-8051889 | MS.gene70189:intron | 45.0% |
!! | TTACTAGGACTGCTGCTTTG+AGG | - | chr4.1:8056759-8056778 | MS.gene70189:intron | 45.0% |
!!! | TGGTGGTGGTGCTTTGTTTT+GGG | - | chr4.1:8051729-8051748 | MS.gene70189:CDS | 45.0% |
!!! | TTGGTGGTGGTGCTTTGTTT+TGG | - | chr4.1:8051728-8051747 | MS.gene70189:CDS | 45.0% |
AAGTCACTGGATGCCATCCA+CGG | + | chr4.1:8056100-8056119 | None:intergenic | 50.0% | |
ACCGAACCAAGCTGATGTGT+AGG | - | chr4.1:8054204-8054223 | MS.gene70189:CDS | 50.0% | |
ACTCTGCTTGTATCAGCCAC+TGG | + | chr4.1:8057228-8057247 | None:intergenic | 50.0% | |
AGCTACCGTTGCATAGTTCC+CGG | - | chr4.1:8052126-8052145 | MS.gene70189:intron | 50.0% | |
AGCTTCGCTGACACAAAAGG+AGG | - | chr4.1:8054904-8054923 | MS.gene70189:intron | 50.0% | |
ATCGTCCTCCACTACAACCT+TGG | + | chr4.1:8055136-8055155 | None:intergenic | 50.0% | |
CACTACCGGGAACTATGCAA+CGG | + | chr4.1:8052134-8052153 | None:intergenic | 50.0% | |
CATCAACACGTCCTTGAAGG+AGG | + | chr4.1:8052274-8052293 | None:intergenic | 50.0% | |
GAAGCATGCCAAGGTTGTAG+TGG | - | chr4.1:8055125-8055144 | MS.gene70189:intron | 50.0% | |
GCCAGGGTTTGTGTTGAATG+AGG | - | chr4.1:8053019-8053038 | MS.gene70189:intron | 50.0% | |
GCCTCATTCAACACAAACCC+TGG | + | chr4.1:8053023-8053042 | None:intergenic | 50.0% | |
GGGTGAAGCAAGCATGATAG+AGG | - | chr4.1:8053950-8053969 | MS.gene70189:intron | 50.0% | |
GGTAACATCAACGCACTACC+GGG | + | chr4.1:8052147-8052166 | None:intergenic | 50.0% | |
GTGTGTGTGTGTGTACTTGG+TGG | - | chr4.1:8051983-8052002 | MS.gene70189:intron | 50.0% | |
TACAACCTTGGCATGCTTCC+TGG | + | chr4.1:8055124-8055143 | None:intergenic | 50.0% | |
TCCCTCCAAAATTCGGGTAG+CGG | + | chr4.1:8055469-8055488 | None:intergenic | 50.0% | |
TTCAACACAAACCCTGGCCT+AGG | + | chr4.1:8053017-8053036 | None:intergenic | 50.0% | |
!! | ACATCAGCTTGGTTCGGTTC+GGG | + | chr4.1:8054202-8054221 | None:intergenic | 50.0% |
!! | CACATCAGCTTGGTTCGGTT+CGG | + | chr4.1:8054203-8054222 | None:intergenic | 50.0% |
!! | GGTTCAGTGTACCGGTTATG+TGG | - | chr4.1:8054225-8054244 | MS.gene70189:CDS | 50.0% |
ACTAAGTGGGGTCGGCTACA+TGG | + | chr4.1:8053315-8053334 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | - | chr4.1:8053314-8053333 | MS.gene70189:intron | 55.0% | |
CCTCTTGCATCCCTCCTTCA+AGG | - | chr4.1:8052260-8052279 | MS.gene70189:intron | 55.0% | |
CCTTGAAGGAGGGATGCAAG+AGG | + | chr4.1:8052263-8052282 | None:intergenic | 55.0% | |
GCATGCCAAGGTTGTAGTGG+AGG | - | chr4.1:8055128-8055147 | MS.gene70189:intron | 55.0% | |
TGGATCTTGGACGTGTCAGC+AGG | + | chr4.1:8055729-8055748 | None:intergenic | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | - | chr4.1:8053315-8053334 | MS.gene70189:intron | 55.0% | |
! | AGCCGCTACCCGAATTTTGG+AGG | - | chr4.1:8055464-8055483 | MS.gene70189:intron | 55.0% |
! | GCCGCTACCCGAATTTTGGA+GGG | - | chr4.1:8055465-8055484 | MS.gene70189:intron | 55.0% |
! | TCTGACCAGGAAGCATGCCA+AGG | - | chr4.1:8055116-8055135 | MS.gene70189:intron | 55.0% |
!! | CATCAGCTTGGTTCGGTTCG+GGG | + | chr4.1:8054201-8054220 | None:intergenic | 55.0% |
TCAGCAGGCTGCGCGAAGAA+AGG | + | chr4.1:8055714-8055733 | None:intergenic | 60.0% | |
!! | GCGCTCACGATCTCTGGAGT+TGG | + | chr4.1:8056078-8056097 | None:intergenic | 60.0% |
!! | TGCAGTGGGCTGTTCTGACC+AGG | - | chr4.1:8055103-8055122 | MS.gene70189:intron | 60.0% |
TCCACGGCGCTCACGATCTC+TGG | + | chr4.1:8056084-8056103 | None:intergenic | 65.0% | |
! | GAGATCGTGAGCGCCGTGGA+TGG | - | chr4.1:8056084-8056103 | MS.gene70189:intron | 65.0% |
! | TCCAGAGATCGTGAGCGCCG+TGG | - | chr4.1:8056080-8056099 | MS.gene70189:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 8051700 | 8057485 | 8051700 | ID=MS.gene70189 |
chr4.1 | mRNA | 8051700 | 8057485 | 8051700 | ID=MS.gene70189.t1;Parent=MS.gene70189 |
chr4.1 | exon | 8057411 | 8057485 | 8057411 | ID=MS.gene70189.t1.exon1;Parent=MS.gene70189.t1 |
chr4.1 | CDS | 8057411 | 8057485 | 8057411 | ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1 |
chr4.1 | exon | 8057278 | 8057352 | 8057278 | ID=MS.gene70189.t1.exon2;Parent=MS.gene70189.t1 |
chr4.1 | CDS | 8057278 | 8057352 | 8057278 | ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1 |
chr4.1 | exon | 8056091 | 8056204 | 8056091 | ID=MS.gene70189.t1.exon3;Parent=MS.gene70189.t1 |
chr4.1 | CDS | 8056091 | 8056204 | 8056091 | ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1 |
chr4.1 | exon | 8055143 | 8055243 | 8055143 | ID=MS.gene70189.t1.exon4;Parent=MS.gene70189.t1 |
chr4.1 | CDS | 8055143 | 8055243 | 8055143 | ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1 |
chr4.1 | exon | 8054576 | 8054647 | 8054576 | ID=MS.gene70189.t1.exon5;Parent=MS.gene70189.t1 |
chr4.1 | CDS | 8054576 | 8054647 | 8054576 | ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1 |
chr4.1 | exon | 8054198 | 8054279 | 8054198 | ID=MS.gene70189.t1.exon6;Parent=MS.gene70189.t1 |
chr4.1 | CDS | 8054198 | 8054279 | 8054198 | ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1 |
chr4.1 | exon | 8053997 | 8054077 | 8053997 | ID=MS.gene70189.t1.exon7;Parent=MS.gene70189.t1 |
chr4.1 | CDS | 8053997 | 8054077 | 8053997 | ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1 |
chr4.1 | exon | 8053687 | 8053725 | 8053687 | ID=MS.gene70189.t1.exon8;Parent=MS.gene70189.t1 |
chr4.1 | CDS | 8053687 | 8053725 | 8053687 | ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1 |
chr4.1 | exon | 8053394 | 8053459 | 8053394 | ID=MS.gene70189.t1.exon9;Parent=MS.gene70189.t1 |
chr4.1 | CDS | 8053394 | 8053459 | 8053394 | ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1 |
chr4.1 | exon | 8053022 | 8053171 | 8053022 | ID=MS.gene70189.t1.exon10;Parent=MS.gene70189.t1 |
chr4.1 | CDS | 8053022 | 8053171 | 8053022 | ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1 |
chr4.1 | exon | 8052392 | 8052520 | 8052392 | ID=MS.gene70189.t1.exon11;Parent=MS.gene70189.t1 |
chr4.1 | CDS | 8052392 | 8052520 | 8052392 | ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1 |
chr4.1 | exon | 8051700 | 8051756 | 8051700 | ID=MS.gene70189.t1.exon12;Parent=MS.gene70189.t1 |
chr4.1 | CDS | 8051700 | 8051756 | 8051700 | ID=cds.MS.gene70189.t1;Parent=MS.gene70189.t1 |
Gene Sequence |
Protein sequence |