AlfalfaGEDB | MS.gene71867

M. sativa cultivar XinJiangDaYe / MS.gene71867

KEGG: K07889
GO: GO:0000166 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0097159 GO:0097367 GO:1901265 GO:1901363
PFAM: PF00071.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71867.t1	AFK38713.1	100	154	0	0	1	154	14	167	3.20E-79	304.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71867.t1	P29687	90.9	154	14	0	1	154	14	167	4.1e-75	282.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71867.t1	G7KFR6	100.0	154	0	0	1	154	14	167	2.3e-79	304.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04918	MS.gene71867	0.800629	1.32E-48	-1.69E-46
MS.gene049283	MS.gene71867	0.825909	3.62E-54	-1.69E-46
MS.gene049499	MS.gene71867	0.81509	1.10E-51	-1.69E-46
MS.gene049680	MS.gene71867	0.802636	5.11E-49	-1.69E-46
MS.gene049983	MS.gene71867	0.828169	1.04E-54	-1.69E-46
MS.gene04998	MS.gene71867	0.81184	5.73E-51	-1.69E-46
MS.gene050359	MS.gene71867	0.815378	9.53E-52	-1.69E-46
MS.gene050646	MS.gene71867	0.835972	1.23E-56	-1.69E-46
MS.gene050945	MS.gene71867	0.804789	1.82E-49	-1.69E-46
MS.gene051184	MS.gene71867	0.843297	1.53E-58	-1.69E-46
MS.gene051234	MS.gene71867	0.805306	1.42E-49	-1.69E-46
MS.gene051541	MS.gene71867	0.803709	3.06E-49	-1.69E-46
MS.gene051699	MS.gene71867	0.830094	3.56E-55	-1.69E-46
MS.gene051959	MS.gene71867	0.802864	4.58E-49	-1.69E-46
MS.gene051960	MS.gene71867	0.800851	1.19E-48	-1.69E-46
MS.gene052118	MS.gene71867	0.8131	3.04E-51	-1.69E-46
MS.gene052533	MS.gene71867	0.838949	2.12E-57	-1.69E-46
MS.gene053228	MS.gene71867	0.812508	4.09E-51	-1.69E-46
MS.gene053456	MS.gene71867	0.800444	1.44E-48	-1.69E-46
MS.gene053575	MS.gene71867	0.805804	1.12E-49	-1.69E-46
MS.gene053726	MS.gene71867	0.823165	1.60E-53	-1.69E-46
MS.gene053879	MS.gene71867	0.830934	2.22E-55	-1.69E-46
MS.gene053963	MS.gene71867	0.804229	2.39E-49	-1.69E-46
MS.gene054892	MS.gene71867	0.861786	8.03E-64	-1.69E-46
MS.gene054893	MS.gene71867	0.862923	3.59E-64	-1.69E-46
MS.gene055150	MS.gene71867	0.849359	3.40E-60	-1.69E-46
MS.gene055886	MS.gene71867	0.803739	3.02E-49	-1.69E-46
MS.gene05624	MS.gene71867	0.833819	4.28E-56	-1.69E-46
MS.gene056677	MS.gene71867	0.81464	1.39E-51	-1.69E-46
MS.gene056699	MS.gene71867	0.830875	2.30E-55	-1.69E-46
MS.gene05686	MS.gene71867	0.800261	1.57E-48	-1.69E-46
MS.gene057102	MS.gene71867	0.836122	1.13E-56	-1.69E-46
MS.gene057174	MS.gene71867	0.830735	2.48E-55	-1.69E-46
MS.gene057622	MS.gene71867	0.830266	3.23E-55	-1.69E-46
MS.gene058095	MS.gene71867	0.836113	1.13E-56	-1.69E-46
MS.gene058159	MS.gene71867	0.839796	1.28E-57	-1.69E-46
MS.gene058429	MS.gene71867	0.834767	2.48E-56	-1.69E-46
MS.gene058592	MS.gene71867	0.844001	9.90E-59	-1.69E-46
MS.gene058781	MS.gene71867	0.800468	1.42E-48	-1.69E-46
MS.gene05878	MS.gene71867	0.827112	1.87E-54	-1.69E-46
MS.gene059170	MS.gene71867	0.811973	5.35E-51	-1.69E-46
MS.gene05952	MS.gene71867	0.871377	7.16E-67	-1.69E-46
MS.gene05956	MS.gene71867	0.810967	8.86E-51	-1.69E-46
MS.gene05985	MS.gene71867	-0.828682	7.85E-55	-1.69E-46
MS.gene06023	MS.gene71867	0.832291	1.03E-55	-1.69E-46
MS.gene060244	MS.gene71867	0.814523	1.48E-51	-1.69E-46
MS.gene060259	MS.gene71867	0.864395	1.25E-64	-1.69E-46
MS.gene060412	MS.gene71867	0.805604	1.23E-49	-1.69E-46
MS.gene060522	MS.gene71867	0.81867	1.74E-52	-1.69E-46
MS.gene060933	MS.gene71867	0.818918	1.53E-52	-1.69E-46
MS.gene060935	MS.gene71867	0.828114	1.08E-54	-1.69E-46
MS.gene060937	MS.gene71867	0.847096	1.44E-59	-1.69E-46
MS.gene060964	MS.gene71867	0.811296	7.52E-51	-1.69E-46
MS.gene061100	MS.gene71867	0.80686	6.70E-50	-1.69E-46
MS.gene061188	MS.gene71867	0.816586	5.12E-52	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71867.t1	MTR_5g076590	100.000	154	0	0	1	154	14	167	2.15e-112	317
MS.gene71867.t1	MTR_3g064390	93.506	154	10	0	1	154	14	167	5.48e-107	303
MS.gene71867.t1	MTR_8g103550	74.026	154	40	0	1	154	13	166	1.82e-86	251
MS.gene71867.t1	MTR_3g064390	83.688	141	23	0	1	141	14	154	3.88e-85	246
MS.gene71867.t1	MTR_2g102060	68.182	154	49	0	1	154	14	167	8.04e-80	234
MS.gene71867.t1	MTR_1g094220	64.516	155	54	1	1	154	35	189	5.02e-72	215
MS.gene71867.t1	MTR_1g094220	63.871	155	55	1	1	154	35	189	2.19e-71	213
MS.gene71867.t1	MTR_1g094220	64.474	152	53	1	1	151	35	186	2.27e-70	211
MS.gene71867.t1	MTR_1g094220	64.474	152	53	1	1	151	35	186	2.82e-70	212
MS.gene71867.t1	MTR_6g021790	45.033	151	83	0	1	151	10	160	3.27e-48	155
MS.gene71867.t1	MTR_8g089985	46.104	154	83	0	1	154	21	174	1.55e-47	154
MS.gene71867.t1	MTR_2g005510	48.344	151	78	0	1	151	19	169	7.48e-47	152
MS.gene71867.t1	MTR_8g031660	43.709	151	85	0	1	151	10	160	7.66e-47	151
MS.gene71867.t1	MTR_3g086980	45.455	154	84	0	1	154	20	173	2.43e-46	150
MS.gene71867.t1	MTR_6g079550	46.753	154	82	0	1	154	16	169	2.71e-46	150
MS.gene71867.t1	MTR_4g079350	44.805	154	85	0	1	154	17	170	2.98e-46	150
MS.gene71867.t1	MTR_4g064897	45.455	154	84	0	1	154	16	169	3.42e-46	150
MS.gene71867.t1	MTR_8g031870	43.046	151	86	0	1	151	10	160	3.96e-46	149
MS.gene71867.t1	MTR_2g027660	43.709	151	85	0	1	151	10	160	4.00e-46	149
MS.gene71867.t1	MTR_2g075950	46.104	154	83	0	1	154	17	170	5.18e-46	149
MS.gene71867.t1	MTR_8g031680	43.046	151	86	0	1	151	10	160	6.07e-46	149
MS.gene71867.t1	MTR_2g014990	45.455	154	84	0	1	154	17	170	6.80e-46	149
MS.gene71867.t1	MTR_3g087160	42.857	154	88	0	1	154	13	166	6.87e-46	149
MS.gene71867.t1	MTR_8g090215	42.857	154	88	0	1	154	13	166	1.37e-45	148
MS.gene71867.t1	MTR_3g069510	45.455	154	84	0	1	154	16	169	2.36e-45	147
MS.gene71867.t1	MTR_2g083860	44.805	154	85	0	1	154	17	170	2.52e-45	147
MS.gene71867.t1	MTR_4g088090	44.805	154	85	0	1	154	17	170	5.36e-45	147
MS.gene71867.t1	MTR_8g036220	46.358	151	81	0	1	151	20	170	5.48e-45	147
MS.gene71867.t1	MTR_8g027220	45.455	154	84	0	1	154	30	183	1.08e-44	146
MS.gene71867.t1	MTR_8g031830	41.333	150	88	0	1	150	10	159	3.55e-44	144
MS.gene71867.t1	MTR_0262s0050	44.156	154	86	0	1	154	19	172	3.07e-43	142
MS.gene71867.t1	MTR_1g078200	44.898	147	81	0	1	147	18	164	5.01e-43	142
MS.gene71867.t1	MTR_1g052475	43.506	154	87	0	1	154	19	172	8.56e-43	141
MS.gene71867.t1	MTR_5g013900	40.260	154	92	0	1	154	13	166	1.39e-42	140
MS.gene71867.t1	MTR_2g090865	42.857	154	88	0	1	154	15	168	2.07e-42	140
MS.gene71867.t1	MTR_7g081700	43.709	151	85	0	1	151	12	162	2.08e-42	140
MS.gene71867.t1	MTR_4g098950	40.260	154	92	0	1	154	13	166	2.14e-42	140
MS.gene71867.t1	MTR_7g051940	44.371	151	84	0	1	151	17	167	3.10e-42	140
MS.gene71867.t1	MTR_8g006970	43.709	151	85	0	1	151	12	162	1.99e-41	137
MS.gene71867.t1	MTR_8g006970	43.709	151	85	0	1	151	26	176	3.56e-41	137
MS.gene71867.t1	MTR_7g405790	41.722	151	88	0	1	151	19	169	6.03e-41	137
MS.gene71867.t1	MTR_2g005500	42.384	151	87	0	1	151	13	163	7.88e-41	135
MS.gene71867.t1	MTR_1g068730	41.935	155	89	1	1	154	19	173	9.19e-41	136
MS.gene71867.t1	MTR_1g068740	41.935	155	89	1	1	154	19	173	2.21e-40	135
MS.gene71867.t1	MTR_7g100020	41.290	155	90	1	1	154	19	173	5.15e-40	134
MS.gene71867.t1	MTR_1g115325	41.290	155	90	1	1	154	19	173	6.94e-40	134
MS.gene71867.t1	MTR_8g107070	45.455	154	84	0	1	154	18	171	3.06e-38	131
MS.gene71867.t1	MTR_4g063160	40.764	157	90	2	1	154	19	175	1.26e-36	125
MS.gene71867.t1	MTR_4g099470	44.615	130	72	0	22	151	9	138	2.66e-36	123
MS.gene71867.t1	MTR_7g117910	39.130	138	84	0	1	138	24	161	1.09e-35	123
MS.gene71867.t1	MTR_8g093740	42.308	156	87	3	1	154	17	171	2.49e-35	122
MS.gene71867.t1	MTR_7g103070	41.667	156	89	2	1	154	20	175	3.31e-35	122
MS.gene71867.t1	MTR_8g092020	40.506	158	87	4	1	151	16	173	7.95e-35	120
MS.gene71867.t1	MTR_1g062760	42.308	156	87	3	1	154	18	172	1.62e-34	120
MS.gene71867.t1	MTR_2g096550	37.179	156	96	2	1	154	19	174	1.03e-33	118
MS.gene71867.t1	MTR_1g029450	40.385	156	90	3	1	154	21	175	1.11e-33	118
MS.gene71867.t1	MTR_3g096350	41.026	156	89	3	1	154	16	170	2.32e-33	117
MS.gene71867.t1	MTR_1g090717	39.490	157	92	3	1	154	19	175	7.19e-33	115
MS.gene71867.t1	MTR_1g097420	38.509	161	92	3	1	154	12	172	3.16e-32	114
MS.gene71867.t1	MTR_4g069850	37.267	161	94	3	1	154	12	172	1.01e-31	112
MS.gene71867.t1	MTR_1g068730	38.400	125	77	0	1	125	19	143	1.66e-31	111
MS.gene71867.t1	MTR_1g068740	38.400	125	77	0	1	125	19	143	2.31e-31	111
MS.gene71867.t1	MTR_2g101890	36.709	158	93	3	1	151	14	171	1.91e-29	107
MS.gene71867.t1	MTR_4g012940	36.025	161	96	3	1	154	12	172	1.30e-28	104
MS.gene71867.t1	MTR_1g097420	37.908	153	88	3	9	154	47	199	4.49e-28	104
MS.gene71867.t1	MTR_8g093740	41.860	129	73	2	28	154	10	138	1.97e-27	100
MS.gene71867.t1	MTR_7g103070	43.220	118	65	2	39	154	2	119	2.69e-26	97.4
MS.gene71867.t1	MTR_6g039490	34.161	161	99	4	1	154	12	172	1.59e-25	97.4
MS.gene71867.t1	MTR_3g096350	39.130	115	67	3	1	113	16	129	1.01e-21	85.5
MS.gene71867.t1	MTR_3g107707	32.450	151	99	3	1	151	17	164	1.23e-21	87.0
MS.gene71867.t1	MTR_3g096350	39.130	115	67	3	1	113	16	129	1.24e-21	85.5
MS.gene71867.t1	MTR_3g107713	32.450	151	99	3	1	151	17	164	1.40e-21	87.0
MS.gene71867.t1	MTR_3g107717	32.450	151	99	3	1	151	17	164	1.45e-21	87.0
MS.gene71867.t1	MTR_3g078260	32.121	165	94	6	1	151	12	172	6.18e-20	82.4
MS.gene71867.t1	MTR_8g075240	31.902	163	97	4	1	151	10	170	6.77e-20	82.0
MS.gene71867.t1	MTR_4g088055	30.061	163	100	4	1	151	10	170	1.72e-19	80.9
MS.gene71867.t1	MTR_5g022600	31.288	163	98	4	1	151	10	170	4.97e-19	79.7
MS.gene71867.t1	MTR_1452s0010	41.463	82	48	0	17	98	1	82	8.17e-19	76.6
MS.gene71867.t1	MTR_6g087980	30.303	165	97	5	1	151	10	170	2.14e-18	78.6
MS.gene71867.t1	MTR_4g073250	30.061	163	100	4	1	151	10	170	3.27e-18	77.8
MS.gene71867.t1	MTR_2g090875	28.834	163	102	4	1	151	10	170	7.80e-18	76.6
MS.gene71867.t1	MTR_1686s0010	39.241	79	48	0	17	95	1	79	2.99e-17	72.4
MS.gene71867.t1	MTR_4g113620	29.139	151	95	5	1	151	17	155	3.83e-16	72.4
MS.gene71867.t1	MTR_3g078260	33.333	114	69	4	1	111	12	121	4.51e-14	65.9
MS.gene71867.t1	MTR_5g092060	29.936	157	100	4	2	151	109	262	4.00e-13	65.5
MS.gene71867.t1	MTR_4g047870	29.936	157	100	4	2	151	96	249	3.64e-12	62.8
MS.gene71867.t1	MTR_8g031810	27.551	98	57	1	1	98	10	93	2.72e-11	57.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71867.t1	AT5G45130	87.013	154	20	0	1	154	14	167	4.31e-97	278
MS.gene71867.t1	AT5G45130	87.013	154	20	0	1	154	22	175	1.69e-96	277
MS.gene71867.t1	AT4G19640	85.714	154	22	0	1	154	14	167	2.14e-96	276
MS.gene71867.t1	AT4G19640	86.614	127	17	0	1	127	14	140	3.28e-78	229
MS.gene71867.t1	AT4G19640	84.496	129	20	0	1	129	14	142	5.57e-78	230
MS.gene71867.t1	AT3G54840	63.871	155	55	1	1	154	3	157	9.40e-71	211
MS.gene71867.t1	AT3G54840	63.871	155	55	1	1	154	37	191	1.44e-70	211
MS.gene71867.t1	AT3G54840	63.816	152	54	1	1	151	37	188	1.68e-69	208
MS.gene71867.t1	AT4G39990	46.358	151	81	0	1	151	21	171	7.45e-48	154
MS.gene71867.t1	AT1G16920	47.403	154	81	0	1	154	17	170	2.65e-47	152
MS.gene71867.t1	AT4G35860	44.444	153	85	0	1	153	10	162	2.82e-47	152
MS.gene71867.t1	AT4G17160	44.444	153	85	0	1	153	10	162	3.11e-47	152
MS.gene71867.t1	AT1G09630	48.052	154	80	0	1	154	16	169	3.55e-47	152
MS.gene71867.t1	AT5G45750	46.104	154	83	0	1	154	17	170	3.76e-47	152
MS.gene71867.t1	AT5G60860	45.455	154	84	0	1	154	17	170	5.54e-47	152
MS.gene71867.t1	AT4G18800	44.805	154	85	0	1	154	17	170	9.76e-47	151
MS.gene71867.t1	AT1G07410	46.753	154	82	0	1	154	16	169	1.16e-46	151
MS.gene71867.t1	AT1G06400	46.753	154	82	0	1	154	17	170	4.48e-46	149
MS.gene71867.t1	AT1G28550	44.156	154	86	0	1	154	17	170	5.96e-46	149
MS.gene71867.t1	AT5G59150	46.104	154	83	0	1	154	16	169	9.35e-46	149
MS.gene71867.t1	AT3G15060	44.805	154	85	0	1	154	17	170	1.52e-45	148
MS.gene71867.t1	AT4G17170	43.046	151	86	0	1	151	10	160	2.19e-45	147
MS.gene71867.t1	AT2G33870	44.805	154	85	0	1	154	17	170	3.78e-45	147
MS.gene71867.t1	AT5G65270	43.506	154	87	0	1	154	21	174	3.85e-45	147
MS.gene71867.t1	AT3G46830	45.455	154	84	0	1	154	16	169	4.28e-45	147
MS.gene71867.t1	AT3G46830	45.455	154	84	0	1	154	16	169	4.28e-45	147
MS.gene71867.t1	AT4G18430	44.156	154	86	0	1	154	17	170	5.26e-45	147
MS.gene71867.t1	AT5G10260	42.208	154	89	0	1	154	13	166	7.35e-45	146
MS.gene71867.t1	AT2G44610	43.506	154	87	0	1	154	13	166	9.09e-45	146
MS.gene71867.t1	AT3G12160	44.805	154	85	0	1	154	19	172	3.92e-44	145
MS.gene71867.t1	AT4G17530	44.371	151	84	0	1	151	12	162	6.66e-44	144
MS.gene71867.t1	AT3G07410	47.020	151	80	0	1	151	16	166	1.06e-43	144
MS.gene71867.t1	AT5G47200	44.371	151	84	0	1	151	12	162	2.11e-43	142
MS.gene71867.t1	AT4G39890	41.290	155	90	1	1	154	13	167	2.81e-43	142
MS.gene71867.t1	AT2G22290	41.558	154	90	0	1	154	13	166	3.59e-43	142
MS.gene71867.t1	AT5G47520	44.218	147	82	0	1	147	18	164	6.06e-43	142
MS.gene71867.t1	AT1G02130	45.033	151	83	0	1	151	12	162	6.72e-43	141
MS.gene71867.t1	AT5G47960	43.506	154	87	0	1	154	19	172	1.68e-42	140
MS.gene71867.t1	AT5G64990	41.558	154	90	0	1	154	11	164	1.15e-41	138
MS.gene71867.t1	AT1G73640	45.033	151	83	0	1	151	17	167	1.18e-41	139
MS.gene71867.t1	AT1G05810	42.384	151	87	0	1	151	16	166	2.89e-41	137
MS.gene71867.t1	AT1G18200	44.371	151	84	0	1	151	17	167	5.58e-41	137
MS.gene71867.t1	AT1G05810	42.384	151	87	0	1	151	62	212	7.58e-41	137
MS.gene71867.t1	AT3G11730	42.208	154	89	0	1	154	12	165	1.01e-40	135
MS.gene71867.t1	AT2G43130	41.722	151	88	0	1	151	16	166	2.19e-40	135
MS.gene71867.t1	AT2G31680	41.060	151	89	0	1	151	16	166	7.93e-40	134
MS.gene71867.t1	AT5G59840	41.290	155	90	1	1	154	19	173	8.98e-40	134
MS.gene71867.t1	AT3G46060	41.290	155	90	1	1	154	19	173	8.98e-40	134
MS.gene71867.t1	AT3G46060	41.290	155	90	1	1	154	19	173	8.98e-40	134
MS.gene71867.t1	AT3G46060	41.290	155	90	1	1	154	19	173	8.98e-40	134
MS.gene71867.t1	AT1G01200	43.226	155	87	1	1	154	32	186	1.32e-39	134
MS.gene71867.t1	AT3G53610	40.645	155	91	1	1	154	19	173	4.37e-39	132
MS.gene71867.t1	AT3G53610	40.645	155	91	1	1	154	19	173	4.37e-39	132
MS.gene71867.t1	AT3G53610	40.645	155	91	1	1	154	19	173	4.37e-39	132
MS.gene71867.t1	AT5G64990	39.752	161	90	1	1	154	11	171	6.92e-39	131
MS.gene71867.t1	AT4G35860	46.957	115	61	0	39	153	2	116	1.39e-36	124
MS.gene71867.t1	AT1G22740	39.752	161	90	3	1	154	12	172	9.60e-36	123
MS.gene71867.t1	AT5G03520	40.645	155	91	1	1	154	19	173	1.72e-35	122
MS.gene71867.t1	AT3G09900	40.000	155	92	1	1	154	19	173	1.15e-34	120
MS.gene71867.t1	AT1G43890	41.026	156	89	3	1	154	17	171	2.05e-34	120
MS.gene71867.t1	AT1G43890	41.026	156	89	3	1	154	17	171	2.05e-34	120
MS.gene71867.t1	AT1G43890	41.026	156	89	3	1	154	17	171	2.05e-34	120
MS.gene71867.t1	AT5G59150	46.552	116	62	0	39	154	3	118	6.47e-33	114
MS.gene71867.t1	AT5G03530	41.667	156	88	3	1	154	17	171	6.70e-33	115
MS.gene71867.t1	AT5G03530	41.667	156	88	3	1	154	17	171	6.70e-33	115
MS.gene71867.t1	AT2G21880	37.888	161	93	3	1	154	13	173	1.50e-32	115
MS.gene71867.t1	AT3G18820	36.646	161	95	3	1	154	12	172	1.16e-31	112
MS.gene71867.t1	AT4G09720	38.509	161	92	3	1	154	12	172	8.55e-31	110
MS.gene71867.t1	AT1G49300	37.267	161	94	3	1	154	12	172	1.07e-30	110
MS.gene71867.t1	AT1G49300	37.267	161	94	3	1	154	12	172	1.07e-30	110
MS.gene71867.t1	AT1G52280	36.646	161	95	3	1	154	12	172	3.15e-30	108
MS.gene71867.t1	AT5G39620	37.267	161	94	4	1	154	9	169	3.56e-30	108
MS.gene71867.t1	AT3G16100	36.646	161	95	3	1	154	12	172	1.12e-29	107
MS.gene71867.t1	AT4G09720	37.349	166	92	4	1	154	12	177	4.74e-28	103
MS.gene71867.t1	AT5G03520	39.344	122	73	1	34	154	42	163	1.11e-27	102
MS.gene71867.t1	AT4G09720	36.047	172	92	4	1	154	12	183	2.27e-27	102
MS.gene71867.t1	AT3G09910	39.744	156	91	3	1	154	17	171	5.89e-27	100
MS.gene71867.t1	AT3G09910	39.744	156	91	3	1	154	17	171	5.89e-27	100
MS.gene71867.t1	AT3G09910	39.744	156	91	3	1	154	17	171	5.89e-27	100
MS.gene71867.t1	AT3G09910	39.744	156	91	3	1	154	17	171	6.83e-27	100
MS.gene71867.t1	AT3G09910	39.744	156	91	3	1	154	17	171	6.83e-27	100
MS.gene71867.t1	AT2G21880	36.301	146	86	3	16	154	3	148	6.05e-26	97.4
MS.gene71867.t1	AT2G21880	36.301	146	86	3	16	154	3	148	6.05e-26	97.4
MS.gene71867.t1	AT4G09720	38.519	135	76	3	27	154	4	138	4.81e-24	92.0
MS.gene71867.t1	AT4G09720	38.519	135	76	3	27	154	4	138	4.81e-24	92.0
MS.gene71867.t1	AT4G09720	38.519	135	76	3	27	154	4	138	4.81e-24	92.0
MS.gene71867.t1	AT5G55080	30.464	151	102	3	1	151	17	164	1.42e-23	92.4
MS.gene71867.t1	AT2G21880	32.919	161	93	4	1	154	13	165	1.13e-22	89.4
MS.gene71867.t1	AT5G20020	32.450	151	99	3	1	151	17	164	1.21e-21	87.0
MS.gene71867.t1	AT5G20010	32.450	151	99	3	1	151	17	164	1.48e-21	87.0
MS.gene71867.t1	AT5G55190	32.450	151	99	3	1	151	17	164	1.60e-21	87.0
MS.gene71867.t1	AT3G51300	31.902	163	97	4	1	151	10	170	2.78e-20	83.2
MS.gene71867.t1	AT2G17800	32.515	163	96	4	1	151	10	170	4.89e-20	82.4
MS.gene71867.t1	AT2G17800	32.515	163	96	4	1	151	10	170	4.89e-20	82.4
MS.gene71867.t1	AT2G44690	32.727	165	97	5	1	153	22	184	1.08e-19	82.0
MS.gene71867.t1	AT4G28950	31.288	163	96	5	1	151	10	168	1.61e-19	81.3
MS.gene71867.t1	AT4G35950	32.515	163	96	5	1	151	10	170	2.14e-19	80.9
MS.gene71867.t1	AT3G48040	29.697	165	98	5	1	151	12	172	1.28e-18	79.0
MS.gene71867.t1	AT4G35020	31.902	163	97	5	1	151	10	170	1.85e-18	78.2
MS.gene71867.t1	AT4G35020	31.902	163	97	5	1	151	10	170	1.85e-18	78.2
MS.gene71867.t1	AT4G35020	31.902	163	97	5	1	151	10	170	1.85e-18	78.2
MS.gene71867.t1	AT5G62880	31.515	165	95	6	1	151	12	172	3.76e-18	77.8
MS.gene71867.t1	AT1G75840	30.675	163	99	5	1	151	10	170	4.29e-18	77.4
MS.gene71867.t1	AT1G20090	30.675	163	99	5	1	151	9	169	7.06e-18	76.6
MS.gene71867.t1	AT5G46025	41.860	86	49	1	67	151	14	99	7.11e-18	74.7
MS.gene71867.t1	AT5G45970	29.448	163	101	4	1	151	10	170	1.20e-17	76.3
MS.gene71867.t1	AT3G48040	29.299	157	93	5	1	143	12	164	7.72e-17	73.6
MS.gene71867.t1	AT5G62880	31.210	157	90	6	1	143	12	164	3.18e-16	72.4
MS.gene71867.t1	AT3G51290	34.109	129	72	3	35	151	644	771	3.90e-16	74.7
MS.gene71867.t1	AT4G35020	31.579	114	71	4	1	111	10	119	4.99e-13	62.8
MS.gene71867.t1	AT4G35020	31.579	114	71	4	1	111	10	119	4.99e-13	62.8
MS.gene71867.t1	AT5G09910	28.313	166	88	5	1	135	26	191	9.95e-11	58.9
MS.gene71867.t1	AT5G09910	28.313	166	88	5	1	135	26	191	9.95e-11	58.9

Find 32 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGGTCAATTCCTTGAATTTC+AGG	0.172043	5.4:-58386503	MS.gene71867:intron
TCAGGTTCTTCTTGGTGATA+TGG	0.216552	5.4:-58386563	None:intergenic
CCACAGTGAAATTTGAGATT+TGG	0.262162	5.4:-58384925	MS.gene71867:CDS
ATTCAATTTCAGGTTCTTCT+TGG	0.293743	5.4:-58386571	None:intergenic
CACAGTGAAATTTGAGATTT+GGG	0.299158	5.4:-58384924	MS.gene71867:CDS
CGTCATTTACTGCCAACGTC+TGG	0.316274	5.4:+58384948	None:intergenic
CAGGTTCTTCTTGGTGATAT+GGG	0.343041	5.4:-58386562	MS.gene71867:CDS
GTGAAACAGGAATCAACAAT+AGG	0.375057	5.4:-58384986	MS.gene71867:intron
CATTTACACGAGCGAAGAAA+TGG	0.391385	5.4:-58384593	MS.gene71867:CDS
CGTGTATATGCTGAGGAAAA+TGG	0.414206	5.4:-58382717	MS.gene71867:CDS
GCAAAAGCCACGACCATGTT+CGG	0.437301	5.4:+58384006	None:intergenic
TGAAACAGGAATCAACAATA+GGG	0.443425	5.4:-58384985	MS.gene71867:intron
TACCTTGCTTCTGAAGCTCT+TGG	0.443949	5.4:+58384568	None:intergenic
CTTCTTGGTGATATGGGTGC+TGG	0.450654	5.4:-58386556	MS.gene71867:CDS
TGTCTATGATATTACTAACT+TGG	0.471350	5.4:-58384831	MS.gene71867:intron
TGCTGGTAACAAAGCTGACT+TGG	0.472663	5.4:-58383986	MS.gene71867:CDS
ATAAAATATGTCATTAACAT+TGG	0.476631	5.4:+58382659	None:intergenic
AAGCTGACTTGGAAGATAAG+AGG	0.510951	5.4:-58383975	MS.gene71867:CDS
GTCATTTACTGCCAACGTCT+GGG	0.532033	5.4:+58384949	None:intergenic
TTAGCTCCCATGTACTATAG+AGG	0.537219	5.4:-58384872	MS.gene71867:CDS
TTTGAGATTTGGGACACAGC+AGG	0.538081	5.4:-58384914	MS.gene71867:CDS
ATTTACACGAGCGAAGAAAT+GGG	0.562436	5.4:-58384592	MS.gene71867:CDS
AGCAGCGCCTCTATAGTACA+TGG	0.565513	5.4:+58384865	None:intergenic
AGGGAATCCGAACATGGTCG+TGG	0.578957	5.4:-58384013	MS.gene71867:CDS
TGTTGCAGGGAATCCGAACA+TGG	0.580245	5.4:-58384019	MS.gene71867:intron
CCTTAACAAAACGCAAAACA+AGG	0.590364	5.4:+58386524	None:intergenic
AGTACATGGGAGCTAAGCTA+TGG	0.598496	5.4:+58384879	None:intergenic
GTCCAAGAGCTTCAGAAGCA+AGG	0.599811	5.4:-58384570	MS.gene71867:intron
GGAAGCACGTGTATATGCTG+AGG	0.658380	5.4:-58382724	MS.gene71867:CDS
GAAACAGGAATCAACAATAG+GGG	0.660375	5.4:-58384984	MS.gene71867:intron
GCAGCGCCTCTATAGTACAT+GGG	0.698335	5.4:+58384866	None:intergenic
CCAAATCTCAAATTTCACTG+TGG	0.747675	5.4:+58384925	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATTTAAAAGATAAATCAAA+AGG	+	chr5.4:58382742-58382761	None:intergenic	10.0%
!!!	AAAAATTTTAGATTGTAAAA+AGG	-	chr5.4:58384720-58384739	MS.gene71867:intron	10.0%
!!!	ATTTATCTTTTAAATTCAAT+TGG	-	chr5.4:58382746-58382765	MS.gene71867:intron	10.0%
!!!	TTTATCTTTTAAATTCAATT+GGG	-	chr5.4:58382747-58382766	MS.gene71867:intron	10.0%
!!	AAACAATAGCTAAAAAATTT+CGG	+	chr5.4:58385068-58385087	None:intergenic	15.0%
!!	ATAAAATATGTCATTAACAT+TGG	+	chr5.4:58386555-58386574	None:intergenic	15.0%
!!	ATCTTATATTATAGAATGTA+TGG	-	chr5.4:58383112-58383131	MS.gene71867:intron	15.0%
!!	ATTAATATATGAATTGTGAA+CGG	-	chr5.4:58384952-58384971	MS.gene71867:CDS	15.0%
!!	TAAGAAGAAATATTAGAATA+TGG	+	chr5.4:58384809-58384828	None:intergenic	15.0%
!!	TATGTTAATTTATTTGTAGA+CGG	+	chr5.4:58383604-58383623	None:intergenic	15.0%
!!	TTATATATAGTTTATTACTG+TGG	-	chr5.4:58384555-58384574	MS.gene71867:intron	15.0%
!!!	AAGAAGAAACAATTTTATTT+AGG	+	chr5.4:58383265-58383284	None:intergenic	15.0%
!!!	AATGACATATTTTATGAAAT+AGG	-	chr5.4:58386560-58386579	MS.gene71867:CDS	15.0%
!!!	GAAAACTAAACTATTTATTT+TGG	-	chr5.4:58384742-58384761	MS.gene71867:intron	15.0%
!!!	TTTTTGACTAAATTGAAATT+GGG	-	chr5.4:58382896-58382915	MS.gene71867:intron	15.0%
!!	TGTAGAATTCAAAATTTATG+AGG	-	chr5.4:58382774-58382793	MS.gene71867:intron	20.0%
!!	TTATATTATAGAATGTATGG+TGG	-	chr5.4:58383115-58383134	MS.gene71867:intron	20.0%
!!	TTTACTTAAAAGTTCAAACT+GGG	-	chr5.4:58383763-58383782	MS.gene71867:intron	20.0%
!!!	CATAGCATGTTATATTTTTT+GGG	-	chr5.4:58383696-58383715	MS.gene71867:intron	20.0%
!!!	GTTTTTGACTAAATTGAAAT+TGG	-	chr5.4:58382895-58382914	MS.gene71867:intron	20.0%
!!!	TATTTTGTATATAGTAGTGT+GGG	-	chr5.4:58384100-58384119	MS.gene71867:intron	20.0%
!!!	TCATAGCATGTTATATTTTT+TGG	-	chr5.4:58383695-58383714	MS.gene71867:intron	20.0%
!!!	TCCTATATTTTTTACATTAG+CGG	-	chr5.4:58383642-58383661	MS.gene71867:intron	20.0%
!!!	TCTTATTCTTACATTTTTTC+TGG	-	chr5.4:58384689-58384708	MS.gene71867:intron	20.0%
!!!	TTATTTTGTATATAGTAGTG+TGG	-	chr5.4:58384099-58384118	MS.gene71867:intron	20.0%
!!!	TTTTGACTAAATTGAAATTG+GGG	-	chr5.4:58382897-58382916	MS.gene71867:intron	20.0%
!	AACTAACCCATGATATTTAA+TGG	-	chr5.4:58385039-58385058	MS.gene71867:intron	25.0%
!	AAGAGCTTCTTAAGAAATTA+AGG	-	chr5.4:58385879-58385898	MS.gene71867:intron	25.0%
!	AATTTAGCAGAAAAAATGTG+TGG	+	chr5.4:58385372-58385391	None:intergenic	25.0%
!	ACCGCTAATGTAAAAAATAT+AGG	+	chr5.4:58383646-58383665	None:intergenic	25.0%
!	AGTCAATCTGTTTAAAGAAT+TGG	+	chr5.4:58384169-58384188	None:intergenic	25.0%
!	ATAAACTCCTTGAATAAAGT+GGG	-	chr5.4:58386099-58386118	MS.gene71867:intron	25.0%
!	ATTGTACTTCAAAGTTATAG+TGG	-	chr5.4:58385124-58385143	MS.gene71867:intron	25.0%
!	CAATAAATAACAACAGATCT+CGG	+	chr5.4:58384146-58384165	None:intergenic	25.0%
!	CTAAAATAATGAACTCATTC+TGG	-	chr5.4:58385166-58385185	MS.gene71867:intron	25.0%
!	CTTTACTTAAAAGTTCAAAC+TGG	-	chr5.4:58383762-58383781	MS.gene71867:intron	25.0%
!	GAAAAAAAACCTGAAATTCA+AGG	+	chr5.4:58382720-58382739	None:intergenic	25.0%
!	GCAACTGTTTAAATACATAT+AGG	+	chr5.4:58386387-58386406	None:intergenic	25.0%
!	TATAAACTCCTTGAATAAAG+TGG	-	chr5.4:58386098-58386117	MS.gene71867:intron	25.0%
!	TATAGTTTCTTCAACTACAT+TGG	-	chr5.4:58385325-58385344	MS.gene71867:intron	25.0%
!	TGAGAAATGTTGTTCAATTA+GGG	-	chr5.4:58383418-58383437	MS.gene71867:intron	25.0%
!	TGAGTTATCAAACATTCATT+TGG	-	chr5.4:58383796-58383815	MS.gene71867:intron	25.0%
!	TGTCTATGATATTACTAACT+TGG	-	chr5.4:58384380-58384399	MS.gene71867:intron	25.0%
!	TTATAAGAGAAGCTATTAGT+TGG	-	chr5.4:58385921-58385940	MS.gene71867:intron	25.0%
!	TTGAGAAATGTTGTTCAATT+AGG	-	chr5.4:58383417-58383436	MS.gene71867:intron	25.0%
!!	AGAATGAATTGTTATGGTTT+TGG	-	chr5.4:58383019-58383038	MS.gene71867:intron	25.0%
!!	TGCTAAATTTTCAAATACCA+GGG	-	chr5.4:58385383-58385402	MS.gene71867:intron	25.0%
	AAATTAACGCAAAGTTCAGT+AGG	+	chr5.4:58385017-58385036	None:intergenic	30.0%
	AAGTACAATTACAACCAGAA+TGG	+	chr5.4:58385113-58385132	None:intergenic	30.0%
	AATATAGCATAGCACAAACA+TGG	-	chr5.4:58384897-58384916	MS.gene71867:CDS	30.0%
	ACTGCTTTGCTGAATTTATT+TGG	-	chr5.4:58384196-58384215	MS.gene71867:intron	30.0%
	AGAAATGTTGTTCAATTAGG+GGG	-	chr5.4:58383420-58383439	MS.gene71867:intron	30.0%
	AGTACAATTACAACCAGAAT+GGG	+	chr5.4:58385112-58385131	None:intergenic	30.0%
	AGTTCTATTCTGAACATGAT+AGG	-	chr5.4:58382987-58383006	MS.gene71867:intron	30.0%
	ATATAACATGCTATGAAGCA+TGG	+	chr5.4:58383691-58383710	None:intergenic	30.0%
	ATTCACCTAACCAAGTTATT+TGG	-	chr5.4:58383857-58383876	MS.gene71867:intron	30.0%
	ATTTATGAGGACAATTTCCA+TGG	-	chr5.4:58382787-58382806	MS.gene71867:intron	30.0%
	CAACTTTAACCCAAATAACT+TGG	+	chr5.4:58383870-58383889	None:intergenic	30.0%
	CGGTAACCATTAAATATCAT+GGG	+	chr5.4:58385048-58385067	None:intergenic	30.0%
	CTCGATTACAAAATCATAAC+AGG	+	chr5.4:58382927-58382946	None:intergenic	30.0%
	GAGAAATGTTGTTCAATTAG+GGG	-	chr5.4:58383419-58383438	MS.gene71867:intron	30.0%
	GCCAAAAAAAATTTATCTCC+CGG	-	chr5.4:58383960-58383979	MS.gene71867:CDS	30.0%
	GTTGTGAGAATGAATTGTTA+TGG	-	chr5.4:58383013-58383032	MS.gene71867:intron	30.0%
	TAACATATATGTAGCAGTGT+CGG	-	chr5.4:58383617-58383636	MS.gene71867:intron	30.0%
	TATATGAATTGTGAACGGTT+AGG	-	chr5.4:58384957-58384976	MS.gene71867:CDS	30.0%
	TATTTGGTCTATTGTGAAAC+AGG	-	chr5.4:58384212-58384231	MS.gene71867:intron	30.0%
	TCGGTAACCATTAAATATCA+TGG	+	chr5.4:58385049-58385068	None:intergenic	30.0%
	TGAAACAGGAATCAACAATA+GGG	-	chr5.4:58384226-58384245	MS.gene71867:intron	30.0%
	TTAAAGTTGTTCATGAACTC+CGG	-	chr5.4:58383881-58383900	MS.gene71867:intron	30.0%
	TTAACCCAAATAACTTGGTT+AGG	+	chr5.4:58383865-58383884	None:intergenic	30.0%
	TTCAATGTACAAGCTAAAGT+TGG	+	chr5.4:58386244-58386263	None:intergenic	30.0%
	TTCACCTAACCAAGTTATTT+GGG	-	chr5.4:58383858-58383877	MS.gene71867:intron	30.0%
	TTTATGAGGACAATTTCCAT+GGG	-	chr5.4:58382788-58382807	MS.gene71867:intron	30.0%
	TTTCCTATACCTGTTACAAA+AGG	-	chr5.4:58385085-58385104	MS.gene71867:intron	30.0%
!	AAATTTTCAAATACCAGGGA+TGG	-	chr5.4:58385387-58385406	MS.gene71867:intron	30.0%
!	AGCTTATGCGATTTTCATTT+TGG	+	chr5.4:58386192-58386211	None:intergenic	30.0%
!	CACAGTGAAATTTGAGATTT+GGG	-	chr5.4:58384287-58384306	MS.gene71867:intron	30.0%
!	CTGCTAAATTTTCAAATACC+AGG	-	chr5.4:58385382-58385401	MS.gene71867:intron	30.0%
!	TGATTATTTCTTCTGTTCAC+AGG	-	chr5.4:58384592-58384611	MS.gene71867:CDS	30.0%
!!	CATGTTGATAGTTCTACTAT+CGG	-	chr5.4:58386039-58386058	MS.gene71867:intron	30.0%
!!	CTTTAAACAGATTGACTTGT+GGG	-	chr5.4:58384172-58384191	MS.gene71867:intron	30.0%
!!	TCTTTAAACAGATTGACTTG+TGG	-	chr5.4:58384171-58384190	MS.gene71867:intron	30.0%
!!!	ACCGGGAGATAAATTTTTTT+TGG	+	chr5.4:58383964-58383983	None:intergenic	30.0%
!!!	ATGAATTGTTATGGTTTTGG+AGG	-	chr5.4:58383022-58383041	MS.gene71867:intron	30.0%
!!!	CTTGTTTTGCGTTTTGTTAA+GGG	-	chr5.4:58382688-58382707	MS.gene71867:CDS	30.0%
!!!	GCATGTTATATTTTTTGGGT+TGG	-	chr5.4:58383700-58383719	MS.gene71867:intron	30.0%
!!!	GTGTCATTTTCCTTTCTTTA+GGG	-	chr5.4:58384485-58384504	MS.gene71867:intron	30.0%
!!!	TGTGTCATTTTCCTTTCTTT+AGG	-	chr5.4:58384484-58384503	MS.gene71867:intron	30.0%
!!!	TTATTTTTGTCTTAACCCTC+CGG	+	chr5.4:58384022-58384041	None:intergenic	30.0%
	AATCCTTTGTACAACCTGAT+TGG	-	chr5.4:58385564-58385583	MS.gene71867:intron	35.0%
	ACTCTTGTATTTACAGTGTG+TGG	+	chr5.4:58383387-58383406	None:intergenic	35.0%
	ACTTGAAGAAGCTCAGATAT+AGG	+	chr5.4:58385688-58385707	None:intergenic	35.0%
	ACTTGAAGAATCTTCTGTGT+TGG	+	chr5.4:58386316-58386335	None:intergenic	35.0%
	AGAACATAAATGTCCCAATC+AGG	+	chr5.4:58385581-58385600	None:intergenic	35.0%
	AGAATCTTCTGTGTTGGAAA+TGG	+	chr5.4:58386310-58386329	None:intergenic	35.0%
	ATACACAAAGCTATAGAGAC+TGG	+	chr5.4:58385467-58385486	None:intergenic	35.0%
	ATACACTTACTACGTCACAA+GGG	+	chr5.4:58385839-58385858	None:intergenic	35.0%
	ATCCTTTGTACAACCTGATT+GGG	-	chr5.4:58385565-58385584	MS.gene71867:intron	35.0%
	ATGAGAAACTACTTGTTTCG+AGG	-	chr5.4:58385742-58385761	MS.gene71867:intron	35.0%
	ATTTACACGAGCGAAGAAAT+GGG	-	chr5.4:58384619-58384638	MS.gene71867:intron	35.0%
	CAGTTTCACTATAGCATCAT+AGG	-	chr5.4:58385299-58385318	MS.gene71867:intron	35.0%
	CATAAATGTAACTGGCACAT+CGG	+	chr5.4:58386425-58386444	None:intergenic	35.0%
	CCAAATCTCAAATTTCACTG+TGG	+	chr5.4:58384289-58384308	None:intergenic	35.0%
	CCTACAACTGCTTATTGAAA+AGG	-	chr5.4:58385992-58386011	MS.gene71867:intron	35.0%
	CCTTAACAAAACGCAAAACA+AGG	+	chr5.4:58382690-58382709	None:intergenic	35.0%
	GAAACAGGAATCAACAATAG+GGG	-	chr5.4:58384227-58384246	MS.gene71867:intron	35.0%
	GATGTGCCAGTTACATTTAT+GGG	-	chr5.4:58386424-58386443	MS.gene71867:intron	35.0%
	GCACTAAAATATTCCAAGCA+TGG	+	chr5.4:58384526-58384545	None:intergenic	35.0%
	GTAGTTCCCATAAATGTAAC+TGG	+	chr5.4:58386433-58386452	None:intergenic	35.0%
	GTGAAACAGGAATCAACAAT+AGG	-	chr5.4:58384225-58384244	MS.gene71867:intron	35.0%
	TACACAAAGCTATAGAGACT+GGG	+	chr5.4:58385466-58385485	None:intergenic	35.0%
	TATACACTTACTACGTCACA+AGG	+	chr5.4:58385840-58385859	None:intergenic	35.0%
	TTATCAAATGAAACCATCCC+TGG	+	chr5.4:58385403-58385422	None:intergenic	35.0%
	TTGGTTAAACCTAAAACCCA+TGG	+	chr5.4:58382807-58382826	None:intergenic	35.0%
	TTGTGACGTAGTAAGTGTAT+AGG	-	chr5.4:58385839-58385858	MS.gene71867:intron	35.0%
!	ACTTTTATGCTGCTACGTTT+TGG	-	chr5.4:58385422-58385441	MS.gene71867:intron	35.0%
!	CCACAGTGAAATTTGAGATT+TGG	-	chr5.4:58384286-58384305	MS.gene71867:intron	35.0%
!	CCTTTTCAATAAGCAGTTGT+AGG	+	chr5.4:58385995-58386014	None:intergenic	35.0%
!	CTTTTATGCTGCTACGTTTT+GGG	-	chr5.4:58385423-58385442	MS.gene71867:intron	35.0%
!	CTTTTCTAACCATAACCAAC+CGG	-	chr5.4:58385493-58385512	MS.gene71867:intron	35.0%
!!	GAAGCAAGGTATTTTCTGAT+TGG	-	chr5.4:58384655-58384674	MS.gene71867:intron	35.0%
!!!	ATGGTTTTGGAGGTTTGAAT+GGG	-	chr5.4:58383032-58383051	MS.gene71867:intron	35.0%
!!!	CCTTGTTTTGCGTTTTGTTA+AGG	-	chr5.4:58382687-58382706	MS.gene71867:CDS	35.0%
!!!	TATGGTTTTGGAGGTTTGAA+TGG	-	chr5.4:58383031-58383050	MS.gene71867:intron	35.0%
	AAGAATCCGAGTTTGAATCC+TGG	-	chr5.4:58383923-58383942	MS.gene71867:intron	40.0%
	AATATTCCAAGCATGGTCTC+TGG	+	chr5.4:58384519-58384538	None:intergenic	40.0%
	AATCCAGCCCACTTTATTCA+AGG	+	chr5.4:58386109-58386128	None:intergenic	40.0%
	ACAGCTCGTATGAGTTACAT+AGG	+	chr5.4:58383320-58383339	None:intergenic	40.0%
	AGAATGTATGGTGGTACTTG+TGG	-	chr5.4:58383124-58383143	MS.gene71867:intron	40.0%
	AGTGTATAGGTGGGATTTGT+TGG	-	chr5.4:58385852-58385871	MS.gene71867:intron	40.0%
	ATTGTACAAGAGTCATGAGC+TGG	+	chr5.4:58386464-58386483	None:intergenic	40.0%
	CATTTACACGAGCGAAGAAA+TGG	-	chr5.4:58384618-58384637	MS.gene71867:intron	40.0%
	CCAAATAGTTCGCTCTTAAC+CGG	+	chr5.4:58383903-58383922	None:intergenic	40.0%
	CGATGTGCCAGTTACATTTA+TGG	-	chr5.4:58386423-58386442	MS.gene71867:intron	40.0%
	CGTATGAGTTACATAGGTGT+CGG	+	chr5.4:58383314-58383333	None:intergenic	40.0%
	CGTGTATATGCTGAGGAAAA+TGG	-	chr5.4:58386494-58386513	MS.gene71867:intron	40.0%
	GAATGTATGGTGGTACTTGT+GGG	-	chr5.4:58383125-58383144	MS.gene71867:intron	40.0%
	GACGTAGTAAGTGTATAGGT+GGG	-	chr5.4:58385843-58385862	MS.gene71867:intron	40.0%
	GGGTCAATTCCTTGAATTTC+AGG	-	chr5.4:58382708-58382727	MS.gene71867:CDS	40.0%
	TATGAAGCACAAACACCTCT+AGG	-	chr5.4:58383167-58383186	MS.gene71867:intron	40.0%
	TCATGACTCTTGTACAATGC+AGG	-	chr5.4:58386466-58386485	MS.gene71867:intron	40.0%
	TGACGTAGTAAGTGTATAGG+TGG	-	chr5.4:58385842-58385861	MS.gene71867:intron	40.0%
	TGTTACAAAAGGACCCATTC+TGG	-	chr5.4:58385096-58385115	MS.gene71867:intron	40.0%
	TTAGCTCCCATGTACTATAG+AGG	-	chr5.4:58384339-58384358	MS.gene71867:intron	40.0%
!	ACTTGTTTCGAGGCTCATTT+TGG	-	chr5.4:58385752-58385771	MS.gene71867:intron	40.0%
!	AGAATGGGTCCTTTTGTAAC+AGG	+	chr5.4:58385097-58385116	None:intergenic	40.0%
!	CATCTTTTCCTCGTAAGTAG+TGG	+	chr5.4:58384066-58384085	None:intergenic	40.0%
!	CGGTTGGTTATGGTTAGAAA+AGG	+	chr5.4:58385495-58385514	None:intergenic	40.0%
!	GAAATGGAGTACTAGGATCT+AGG	+	chr5.4:58386294-58386313	None:intergenic	40.0%
!	GGACAATTTCCATGGGTTTT+AGG	-	chr5.4:58382795-58382814	MS.gene71867:intron	40.0%
!	GGTCCTTTTGTAACAGGTAT+AGG	+	chr5.4:58385091-58385110	None:intergenic	40.0%
!	TCTTCCTTGTTTGAAGATGC+CGG	+	chr5.4:58385515-58385534	None:intergenic	40.0%
!	TGTGTTGGAAATGGAGTACT+AGG	+	chr5.4:58386301-58386320	None:intergenic	40.0%
!!	AAGCTGACTTGGAAGATAAG+AGG	-	chr5.4:58385236-58385255	MS.gene71867:intron	40.0%
!!	TTGGACGAACTTCTAGCTTA+CGG	-	chr5.4:58385771-58385790	MS.gene71867:intron	40.0%
!!	TTTTTACATTAGCGGTGTCG+AGG	-	chr5.4:58383650-58383669	MS.gene71867:intron	40.0%
!!!	ACTCATTCTGGTTTTGTTGC+AGG	-	chr5.4:58385178-58385197	MS.gene71867:intron	40.0%
!!!	CTCATTCTGGTTTTGTTGCA+GGG	-	chr5.4:58385179-58385198	MS.gene71867:intron	40.0%
	ACGTGTCATACGAGTGTCAT+AGG	+	chr5.4:58383220-58383239	None:intergenic	45.0%
	ACTCCTTGAATAAAGTGGGC+TGG	-	chr5.4:58386103-58386122	MS.gene71867:intron	45.0%
	AGTACATGGGAGCTAAGCTA+TGG	+	chr5.4:58384335-58384354	None:intergenic	45.0%
	CATGGTAATCGAGTTTGACC+GGG	+	chr5.4:58383981-58384000	None:intergenic	45.0%
	CCATGGTAATCGAGTTTGAC+CGG	+	chr5.4:58383982-58384001	None:intergenic	45.0%
	CCGGTTAAGAGCGAACTATT+TGG	-	chr5.4:58383900-58383919	MS.gene71867:intron	45.0%
	CGAATCAAAGCAGCAATGCA+TGG	+	chr5.4:58386150-58386169	None:intergenic	45.0%
	CGGTCAAACTCGATTACCAT+GGG	-	chr5.4:58383980-58383999	MS.gene71867:CDS	45.0%
	GAGTCATGAGCTGGATAAGT+TGG	+	chr5.4:58386455-58386474	None:intergenic	45.0%
	GGGCTGGATTAATTCGTTGT+TGG	-	chr5.4:58386119-58386138	MS.gene71867:intron	45.0%
	GGTCAAACTCGATTACCATG+GGG	-	chr5.4:58383981-58384000	MS.gene71867:CDS	45.0%
	GTAACTCATACGAGCTGTGT+TGG	-	chr5.4:58383322-58383341	MS.gene71867:intron	45.0%
	GTCATTTACTGCCAACGTCT+GGG	+	chr5.4:58384265-58384284	None:intergenic	45.0%
	TACTTCGACACTCCTAAGAC+AGG	-	chr5.4:58383285-58383304	MS.gene71867:intron	45.0%
	TAGTAGTGTGGGTGCATCAA+TGG	-	chr5.4:58384111-58384130	MS.gene71867:intron	45.0%
	TGCTGGTAACAAAGCTGACT+TGG	-	chr5.4:58385225-58385244	MS.gene71867:intron	45.0%
!	AGCATTTTTCTCCCAGACGT+TGG	-	chr5.4:58384251-58384270	MS.gene71867:intron	45.0%
!	AGTTCTACTATCGGTGCTTC+TGG	-	chr5.4:58386048-58386067	MS.gene71867:intron	45.0%
!	CTAGAGTACCACTACTTACG+AGG	-	chr5.4:58384055-58384074	MS.gene71867:intron	45.0%
!	GTCCCAATCAGGTTGTACAA+AGG	+	chr5.4:58385570-58385589	None:intergenic	45.0%
!	GTGGGTGCATCAATGGTTTT+GGG	-	chr5.4:58384118-58384137	MS.gene71867:intron	45.0%
!	GTTAGGCAGATTCGACTTGA+AGG	-	chr5.4:58384974-58384993	MS.gene71867:CDS	45.0%
!	GTTCTACTATCGGTGCTTCT+GGG	-	chr5.4:58386049-58386068	MS.gene71867:intron	45.0%
!	TACGAGTGTCATAGGAGTGT+CGG	+	chr5.4:58383212-58383231	None:intergenic	45.0%
!	TGTGGGTGCATCAATGGTTT+TGG	-	chr5.4:58384117-58384136	MS.gene71867:intron	45.0%
!	TTGAAGATGCCGGTTGGTTA+TGG	+	chr5.4:58385505-58385524	None:intergenic	45.0%
!	TTTGAGATTTGGGACACAGC+AGG	-	chr5.4:58384297-58384316	MS.gene71867:intron	45.0%
!!	TACCTTGCTTCTGAAGCTCT+TGG	+	chr5.4:58384646-58384665	None:intergenic	45.0%
!!	TTATGCTGCTACGTTTTGGG+TGG	-	chr5.4:58385426-58385445	MS.gene71867:intron	45.0%
!!!	GTCACAAGGGCTTTTTCAGT+TGG	+	chr5.4:58385826-58385845	None:intergenic	45.0%
!!!	TTTTCCTTTCTTTAGGGCCC+TGG	-	chr5.4:58384491-58384510	MS.gene71867:intron	45.0%
!!!	AAAAAAAATCAATTTTTTTT+TGG	+	chr5.4:58382826-58382845	None:intergenic	5.0%
!!!	TTTAAAATTTAATAATATGA+TGG	-	chr5.4:58382951-58382970	MS.gene71867:intron	5.0%
	AGCAGCGCCTCTATAGTACA+TGG	+	chr5.4:58384349-58384368	None:intergenic	50.0%
	ATCCGAGTTTGAATCCTGGC+TGG	-	chr5.4:58383927-58383946	MS.gene71867:intron	50.0%
	CCAACCGGCATCTTCAAACA+AGG	-	chr5.4:58385508-58385527	MS.gene71867:intron	50.0%
	CCGGTCAAACTCGATTACCA+TGG	-	chr5.4:58383979-58383998	MS.gene71867:CDS	50.0%
	CGTCATTTACTGCCAACGTC+TGG	+	chr5.4:58384266-58384285	None:intergenic	50.0%
	CTCCAGCCAGGATTCAAACT+CGG	+	chr5.4:58383932-58383951	None:intergenic	50.0%
	GACACTCGTATGACACGTGT+CGG	-	chr5.4:58383222-58383241	MS.gene71867:intron	50.0%
	GCAAAAGCCACGACCATGTT+CGG	+	chr5.4:58385208-58385227	None:intergenic	50.0%
	GCAGCGCCTCTATAGTACAT+GGG	+	chr5.4:58384348-58384367	None:intergenic	50.0%
	GTCCAAGAGCTTCAGAAGCA+AGG	-	chr5.4:58384641-58384660	MS.gene71867:intron	50.0%
	TGGCTAAGAATACTCCAGCC+AGG	+	chr5.4:58383944-58383963	None:intergenic	50.0%
	TGTTGCAGGGAATCCGAACA+TGG	-	chr5.4:58385192-58385211	MS.gene71867:intron	50.0%
!	AACATGGTCGTGGCTTTTGC+TGG	-	chr5.4:58385208-58385227	MS.gene71867:intron	50.0%
!	CCTTGTTTGAAGATGCCGGT+TGG	+	chr5.4:58385511-58385530	None:intergenic	50.0%
!	CTTCTTGGTGATATGGGTGC+TGG	-	chr5.4:58382655-58382674	MS.gene71867:CDS	50.0%
!	GGAAGCACGTGTATATGCTG+AGG	-	chr5.4:58386487-58386506	MS.gene71867:intron	50.0%
!!	GCACAAACACCTCTAGGACT+AGG	-	chr5.4:58383173-58383192	MS.gene71867:intron	50.0%
	ACGTGTCGGACAGCTAAGAC+TGG	-	chr5.4:58383236-58383255	MS.gene71867:intron	55.0%
	AGGGAATCCGAACATGGTCG+TGG	-	chr5.4:58385198-58385217	MS.gene71867:intron	55.0%
	ATGAAGCATGGACTCCGACG+CGG	+	chr5.4:58383679-58383698	None:intergenic	55.0%
	TCTTAACCCTCCGGTTCCCA+GGG	+	chr5.4:58384013-58384032	None:intergenic	55.0%
!!	AAGCATGGTCTCTGGAGCCA+GGG	+	chr5.4:58384511-58384530	None:intergenic	55.0%
!!	AGGTGTCGGACACCTGTCTT+AGG	+	chr5.4:58383300-58383319	None:intergenic	55.0%
!!	CTCTAGGACTAGGTGTGTCG+CGG	-	chr5.4:58383183-58383202	MS.gene71867:intron	55.0%
	CGCGACACACCTAGTCCTAG+AGG	+	chr5.4:58383185-58383204	None:intergenic	60.0%
	CTGGCTCCAGAGACCATGCT+TGG	-	chr5.4:58384510-58384529	MS.gene71867:intron	60.0%
	CTTAACCCTCCGGTTCCCAG+GGG	+	chr5.4:58384012-58384031	None:intergenic	60.0%
	GGAGCCAGGGCCCTAAAGAA+AGG	+	chr5.4:58384498-58384517	None:intergenic	60.0%
	GTCTTAACCCTCCGGTTCCC+AGG	+	chr5.4:58384014-58384033	None:intergenic	60.0%
	TACCATGGGGCCTTTCCCCT+GGG	-	chr5.4:58383994-58384013	MS.gene71867:CDS	60.0%
	TTACCATGGGGCCTTTCCCC+TGG	-	chr5.4:58383993-58384012	MS.gene71867:CDS	60.0%
!!	CAAGCATGGTCTCTGGAGCC+AGG	+	chr5.4:58384512-58384531	None:intergenic	60.0%
	CCTTTCCCCTGGGAACCGGA+GGG	-	chr5.4:58384004-58384023	MS.gene71867:CDS	65.0%
	TTCCCAGGGGAAAGGCCCCA+TGG	+	chr5.4:58383999-58384018	None:intergenic	65.0%
	CCCTCCGGTTCCCAGGGGAA+AGG	+	chr5.4:58384007-58384026	None:intergenic	70.0%
	GCCTTTCCCCTGGGAACCGG+AGG	-	chr5.4:58384003-58384022	MS.gene71867:CDS	70.0%
	GGGGCCTTTCCCCTGGGAAC+CGG	-	chr5.4:58384000-58384019	MS.gene71867:CDS	70.0%
!	CGGTGTCGAGGTGTCCGCGT+CGG	-	chr5.4:58383662-58383681	MS.gene71867:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	58382652	58386581	58382652	ID=MS.gene71867
chr5.4	mRNA	58382652	58386581	58382652	ID=MS.gene71867.t1;Parent=MS.gene71867
chr5.4	exon	58386504	58386581	58386504	ID=MS.gene71867.t1.exon1;Parent=MS.gene71867.t1
chr5.4	CDS	58386504	58386581	58386504	ID=cds.MS.gene71867.t1;Parent=MS.gene71867.t1
chr5.4	exon	58384832	58384999	58384832	ID=MS.gene71867.t1.exon2;Parent=MS.gene71867.t1
chr5.4	CDS	58384832	58384999	58384832	ID=cds.MS.gene71867.t1;Parent=MS.gene71867.t1
chr5.4	exon	58384571	58384619	58384571	ID=MS.gene71867.t1.exon3;Parent=MS.gene71867.t1
chr5.4	CDS	58384571	58384619	58384571	ID=cds.MS.gene71867.t1;Parent=MS.gene71867.t1
chr5.4	exon	58383960	58384033	58383960	ID=MS.gene71867.t1.exon4;Parent=MS.gene71867.t1
chr5.4	CDS	58383960	58384033	58383960	ID=cds.MS.gene71867.t1;Parent=MS.gene71867.t1
chr5.4	exon	58382652	58382745	58382652	ID=MS.gene71867.t1.exon5;Parent=MS.gene71867.t1
chr5.4	CDS	58382652	58382745	58382652	ID=cds.MS.gene71867.t1;Parent=MS.gene71867.t1

Gene Sequence

>MS.gene71867

GTTCTTCTTGGTGATATGGGTGCTGGAAAATCTAGCCTTGTTTTGCGTTTTGTTAAGGGTCAATTCCTTGAATTTCAGGTTTTTTTTCCTTTTGATTTATCTTTTAAATTCAATTGGGTAATTGTAGAATTCAAAATTTATGAGGACAATTTCCATGGGTTTTAGGTTTAACCAAAAAAAAATTGATTTTTTTTTCAAGTTTGAAAATTGTTTTTTTGTTGTTGCAACTGTTGATTTTGTTGTGTTTTTGACTAAATTGAAATTGGGGTTTTCCTGTTATGATTTTGTAATCGAGTGTTTTTAAAATTTAATAATATGATGGAGAAGATTAGAGAAGTTCTATTCTGAACATGATAGGATTGTTGTGAGAATGAATTGTTATGGTTTTGGAGGTTTGAATGGGATCATTCTTAGATTAGCTTTAGTGCAGAACTCTTAACTTTTTAATTTTGATTATAATATCTTATATTATAGAATGTATGGTGGTACTTGTGGGACACATGTAACTTATGAGCTATGAAGCACAAACACCTCTAGGACTAGGTGTGTCGCGGTGTCCGACACTCCTATGACACTCGTATGACACGTGTCGGACAGCTAAGACTGGTGTCCTAAATAAAATTGTTTCTTCTTTACTTCGACACTCCTAAGACAGGTGTCCGACACCTATGTAACTCATACGAGCTGTGTTGGACAACTTAAATATTTGAAACAATTTTTTCACTATTGCTTCCACACACTGTAAATACAAGAGTTACATATGTGTTGAGAAATGTTGTTCAATTAGGGGGTTGTAGACATTAAAGTTGATTATAACATTTTTAACTTTTTTGACAGTAGATGAATAAATAAAGATCAAATACTATGATATCTTGTTTCATAACTTTTTCTAATGAAATAAATTGCAAAAGTTAGATGCTTATGTATGTATTTTGATTTTCATTTTAGACCGTCTACAAATAAATTAACATATATGTAGCAGTGTCGGTGTCCTATATTTTTTACATTAGCGGTGTCGAGGTGTCCGCGTCGGAGTCCATGCTTCATAGCATGTTATATTTTTTGGGTTGGCTGAATAGATTAGTCATTACTCTCTTCGTACATAAGATACTTTACTTAAAAGTTCAAACTGGGTGTTGCTTTATGAGTTATCAAACATTCATTTGGATGTTGATCTCACAATAAATGTTTAGTAGTTGTTAACAATTCACCTAACCAAGTTATTTGGGTTAAAGTTGTTCATGAACTCCGGTTAAGAGCGAACTATTTGGAAGAATCCGAGTTTGAATCCTGGCTGGAGTATTCTTAGCCAAAAAAAATTTATCTCCCGGTCAAACTCGATTACCATGGGGCCTTTCCCCTGGGAACCGGAGGGTTAAGACAAAAATAAAATAAAAAATCATCTAGAGTACCACTACTTACGAGGAAAAGATGTTTACAAGAGTGATTATTTTGTATATAGTAGTGTGGGTGCATCAATGGTTTTGGGTTCCGAGATCTGTTGTTATTTATTGCCAATTCTTTAAACAGATTGACTTGTGGGCACTGCTTTGCTGAATTTATTTGGTCTATTGTGAAACAGGAATCAACAATAGGGGCAGCATTTTTCTCCCAGACGTTGGCAGTAAATGACGCCACAGTGAAATTTGAGATTTGGGACACAGCAGGACAAGAGAGATACCATAGCTTAGCTCCCATGTACTATAGAGGCGCTGCTGCTGCTATCATTGTCTATGATATTACTAACTTGGTATGATATCTTTTTCTCTGTATATTAAGATTTAAATGAAGAGAATATCAGTTCTGCTAGTTTGCTTCTTTCTTTCAATTTGTGTGTCATTTTCCTTTCTTTAGGGCCCTGGCTCCAGAGACCATGCTTGGAATATTTTAGTGCTTTAATTGTTTATATATAGTTTATTACTGTGGTTTTAACTTTTATATGATTATTTCTTCTGTTCACAGGAGTCATTTACACGAGCGAAGAAATGGGTCCAAGAGCTTCAGAAGCAAGGTATTTTCTGATTGGTTCTGAAGTTTTCTTATTCTTACATTTTTTCTGGAGTGAAGTAAAAATTTTAGATTGTAAAAAGGAAAACTAAACTATTTATTTTGGTTACAAATTTCTGATGCAGTCTATATGTAAAGCAATGTTGACCATATTCTAATATTTCTTCTTAGTTGAAAATAACTTTCGTCGATTCAATGAAACTATAAAGTCATATTTTATACAAAAAAAAAAATATATAATATAGCATAGCACAAACATGGTTGATAATATTAGACATGATGTATTGAGAGTGATTAATATATGAATTGTGAACGGTTAGGCAGATTCGACTTGAAGGTTCTACTTGCAGAAACACCTACTGAACTTTGCGTTAATTTGAAACTAACCCATGATATTTAATGGTTACCGAAATTTTTTAGCTATTGTTTCCTATACCTGTTACAAAAGGACCCATTCTGGTTGTAATTGTACTTCAAAGTTATAGTGGCAGCTGTAGTTGATTCGATCTAAAATAATGAACTCATTCTGGTTTTGTTGCAGGGAATCCGAACATGGTCGTGGCTTTTGCTGGTAACAAAGCTGACTTGGAAGATAAGAGGAAAGTGACAGCTGAAGTAAGTATTACTATTATTGTGTTTTCAGTTTCACTATAGCATCATAGGAATTATAGTTTCTTCAACTACATTGGTAATTAATTGCAACATTATCTCCACACATTTTTTCTGCTAAATTTTCAAATACCAGGGATGGTTTCATTTGATAACTTTTATGCTGCTACGTTTTGGGTGGTATTTGTTGTTAGTCCCAGTCTCTATAGCTTTGTGTATGAAAACCTTTTCTAACCATAACCAACCGGCATCTTCAAACAAGGAAGATTTTGTGCATTTGAGTCGTCAAATACTTGAATCCTTTGTACAACCTGATTGGGACATTTATGTTCTACATATTTTAACTAATCTGAGCATCTTCAAGTTGAGCTTTATAAATTCAATAATTCAATAATTGCTTTTAACTATTTTAACTAACCTATATCTGAGCTTCTTCAAGTTGAGCTTTATAAATTCAATAATTGCTTTTGCATCATGAGAAACTACTTGTTTCGAGGCTCATTTTGGACGAACTTCTAGCTTACGGAAGTTTCTCGATTAATTAAGAATTTAGTTCCAACTGAAAAAGCCCTTGTGACGTAGTAAGTGTATAGGTGGGATTTGTTGGATGAAAGAGCTTCTTAAGAAATTAAGGCGCAGAAGTCGATTTCAACTTATAAGAGAAGCTATTAGTTGGAACACTCAGCTGTTGCTAAATGAGTAAATGATTTCAATCTTTTCTTTTCCTACAACTGCTTATTGAAAAGGTTATTTTAGCTGACTCTAAACAAGCATGTTGATAGTTCTACTATCGGTGCTTCTGGGTTAGACTAACAAATAGTATATAAAATTATAAACTCCTTGAATAAAGTGGGCTGGATTAATTCGTTGTTGGTTTCACCATGCATTGCTGCTTTGATTCGTAAAGTCATGATATTATGTCCAAAATGAAAATCGCATAAGCTTAACTTCGAAATGTTTGTCTACAGTAATTCCAACTTTAGCTTGTACATTGAATAGTTTACTTTGCTAATTGTTCAGTGTCCTAGATCCTAGTACTCCATTTCCAACACAGAAGATTCTTCAAGTATAATCTACTATTAAAATCATTTTTTATTCTACAATAATCATTAATAGCCTATATGTATTTAAACAGTTGCATATTTTATACATATCCGATGTGCCAGTTACATTTATGGGAACTACCAACTTATCCAGCTCATGACTCTTGTACAATGCAGGAAGCACGTGTATATGCTGAGGAAAATGGTCTGTTTTTCATAGAGACGTCTGCGAAAACTGCAGCCAATGTTAATGACATATTTTATGAAATAG

Protein sequence

>MS.gene71867.t1

VLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKADLEDKRKVTAEEARVYAEENGLFFIETSAKTAANVNDIFYEI