Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75346.t1 | XP_003604373.1 | 97.9 | 281 | 5 | 1 | 1 | 281 | 1 | 280 | 8.30E-158 | 566.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75346.t1 | B7FK63 | 97.9 | 281 | 5 | 1 | 1 | 281 | 1 | 280 | 6.0e-158 | 566.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene75346 | 0.815535 | 8.80E-52 | -1.69E-46 |
| MS.gene049993 | MS.gene75346 | 0.813916 | 2.01E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene75346 | 0.82911 | 6.18E-55 | -1.69E-46 |
| MS.gene050404 | MS.gene75346 | 0.810118 | 1.35E-50 | -1.69E-46 |
| MS.gene050406 | MS.gene75346 | 0.827019 | 1.97E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene75346 | -0.83068 | 2.56E-55 | -1.69E-46 |
| MS.gene050464 | MS.gene75346 | 0.802342 | 5.87E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene75346 | 0.822451 | 2.35E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene75346 | 0.812445 | 4.23E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene75346 | 0.801469 | 8.87E-49 | -1.69E-46 |
| MS.gene051158 | MS.gene75346 | -0.803556 | 3.30E-49 | -1.69E-46 |
| MS.gene051171 | MS.gene75346 | 0.871357 | 7.27E-67 | -1.69E-46 |
| MS.gene051208 | MS.gene75346 | 0.85646 | 3.17E-62 | -1.69E-46 |
| MS.gene051242 | MS.gene75346 | 0.851497 | 8.54E-61 | -1.69E-46 |
| MS.gene051244 | MS.gene75346 | 0.852659 | 3.99E-61 | -1.69E-46 |
| MS.gene051525 | MS.gene75346 | 0.839084 | 1.96E-57 | -1.69E-46 |
| MS.gene051552 | MS.gene75346 | -0.803878 | 2.82E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene75346 | 0.848285 | 6.76E-60 | -1.69E-46 |
| MS.gene052011 | MS.gene75346 | -0.839476 | 1.55E-57 | -1.69E-46 |
| MS.gene052134 | MS.gene75346 | 0.846585 | 1.98E-59 | -1.69E-46 |
| MS.gene052135 | MS.gene75346 | 0.83262 | 8.52E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene75346 | 0.806671 | 7.34E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene75346 | 0.827574 | 1.45E-54 | -1.69E-46 |
| MS.gene052505 | MS.gene75346 | 0.837057 | 6.51E-57 | -1.69E-46 |
| MS.gene052589 | MS.gene75346 | 0.846025 | 2.81E-59 | -1.69E-46 |
| MS.gene052590 | MS.gene75346 | 0.810427 | 1.16E-50 | -1.69E-46 |
| MS.gene052758 | MS.gene75346 | 0.803538 | 3.32E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene75346 | 0.807063 | 6.07E-50 | -1.69E-46 |
| MS.gene053330 | MS.gene75346 | 0.918724 | 1.09E-86 | -1.69E-46 |
| MS.gene053579 | MS.gene75346 | 0.80679 | 6.93E-50 | -1.69E-46 |
| MS.gene053907 | MS.gene75346 | 0.802068 | 6.68E-49 | -1.69E-46 |
| MS.gene053971 | MS.gene75346 | 0.86293 | 3.57E-64 | -1.69E-46 |
| MS.gene054102 | MS.gene75346 | 0.87447 | 6.59E-68 | -1.69E-46 |
| MS.gene054107 | MS.gene75346 | 0.821184 | 4.62E-53 | -1.69E-46 |
| MS.gene054110 | MS.gene75346 | 0.864352 | 1.29E-64 | -1.69E-46 |
| MS.gene05413 | MS.gene75346 | 0.816374 | 5.72E-52 | -1.69E-46 |
| MS.gene054719 | MS.gene75346 | 0.842463 | 2.55E-58 | -1.69E-46 |
| MS.gene054742 | MS.gene75346 | -0.809093 | 2.24E-50 | -1.69E-46 |
| MS.gene054884 | MS.gene75346 | -0.807475 | 4.96E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene75346 | 0.811459 | 6.93E-51 | -1.69E-46 |
| MS.gene055370 | MS.gene75346 | 0.893782 | 4.56E-75 | -1.69E-46 |
| MS.gene055539 | MS.gene75346 | 0.802733 | 4.88E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene75346 | 0.854867 | 9.25E-62 | -1.69E-46 |
| MS.gene056305 | MS.gene75346 | 0.816623 | 5.03E-52 | -1.69E-46 |
| MS.gene056337 | MS.gene75346 | 0.816694 | 4.85E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene75346 | 0.852369 | 4.83E-61 | -1.69E-46 |
| MS.gene056442 | MS.gene75346 | 0.804088 | 2.56E-49 | -1.69E-46 |
| MS.gene056451 | MS.gene75346 | 0.819782 | 9.69E-53 | -1.69E-46 |
| MS.gene056514 | MS.gene75346 | 0.81076 | 9.82E-51 | -1.69E-46 |
| MS.gene056633 | MS.gene75346 | 0.930333 | 1.91E-93 | -1.69E-46 |
| MS.gene056664 | MS.gene75346 | 0.870322 | 1.59E-66 | -1.69E-46 |
| MS.gene056796 | MS.gene75346 | 0.808272 | 3.36E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene75346 | -0.80631 | 8.76E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene75346 | 0.815929 | 7.19E-52 | -1.69E-46 |
| MS.gene057048 | MS.gene75346 | 0.814804 | 1.28E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene75346 | 0.804815 | 1.80E-49 | -1.69E-46 |
| MS.gene057196 | MS.gene75346 | 0.854119 | 1.52E-61 | -1.69E-46 |
| MS.gene057332 | MS.gene75346 | 0.823138 | 1.63E-53 | -1.69E-46 |
| MS.gene057658 | MS.gene75346 | 0.811019 | 8.63E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene75346 | 0.802548 | 5.33E-49 | -1.69E-46 |
| MS.gene058233 | MS.gene75346 | 0.888928 | 3.82E-73 | -1.69E-46 |
| MS.gene058276 | MS.gene75346 | 0.825759 | 3.93E-54 | -1.69E-46 |
| MS.gene058444 | MS.gene75346 | 0.815205 | 1.04E-51 | -1.69E-46 |
| MS.gene058746 | MS.gene75346 | 0.932511 | 7.63E-95 | -1.69E-46 |
| MS.gene059011 | MS.gene75346 | 0.823914 | 1.07E-53 | -1.69E-46 |
| MS.gene05914 | MS.gene75346 | 0.823351 | 1.45E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene75346 | 0.808884 | 2.49E-50 | -1.69E-46 |
| MS.gene059512 | MS.gene75346 | 0.884785 | 1.42E-71 | -1.69E-46 |
| MS.gene060087 | MS.gene75346 | -0.822122 | 2.80E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene75346 | 0.802109 | 6.56E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene75346 | 0.823415 | 1.40E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene75346 | 0.807104 | 5.95E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75346.t1 | MTR_4g010140 | 97.865 | 281 | 5 | 1 | 1 | 281 | 1 | 280 | 0.0 | 573 |
| MS.gene75346.t1 | MTR_4g010140 | 97.044 | 203 | 5 | 1 | 1 | 203 | 1 | 202 | 6.06e-148 | 413 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75346.t1 | AT3G15840 | 65.000 | 280 | 83 | 4 | 2 | 281 | 4 | 268 | 1.75e-133 | 379 |
| MS.gene75346.t1 | AT3G15840 | 64.286 | 280 | 85 | 4 | 2 | 281 | 4 | 268 | 1.21e-131 | 374 |
| MS.gene75346.t1 | AT3G15840 | 71.667 | 240 | 62 | 2 | 42 | 281 | 15 | 248 | 3.18e-130 | 369 |
| MS.gene75346.t1 | AT3G15840 | 63.929 | 280 | 83 | 5 | 2 | 281 | 4 | 265 | 4.52e-129 | 367 |
| MS.gene75346.t1 | AT3G15840 | 75.117 | 213 | 52 | 1 | 69 | 281 | 3 | 214 | 4.48e-123 | 350 |
Find 60 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTCCTAGTGAAGAATT+TGG | 0.251751 | 4.2:+90036512 | MS.gene75346:CDS |
| GGTTCACCACCGCACATAAT+TGG | 0.252908 | 4.2:-90039511 | None:intergenic |
| ATATTTGAATGCTGTATATA+GGG | 0.271703 | 4.2:-90039573 | None:intergenic |
| GGCTTGTTCTGTAAAGGTTT+TGG | 0.273657 | 4.2:-90039894 | None:intergenic |
| ACTTGAAATTGCAGTCTATA+TGG | 0.299330 | 4.2:-90039870 | None:intergenic |
| CATATTTGAATGCTGTATAT+AGG | 0.316965 | 4.2:-90039574 | None:intergenic |
| TGCGAACTGAATCTTGTTCC+AGG | 0.318141 | 4.2:+90040652 | MS.gene75346:CDS |
| TCTATAACTGCAGTTGTGTC+TGG | 0.373918 | 4.2:-90040386 | None:intergenic |
| CATTTACAAATGGAGTAGAT+TGG | 0.384976 | 4.2:+90039841 | MS.gene75346:CDS |
| AGTAACATATTACCATGTTT+AGG | 0.389269 | 4.2:-90039601 | None:intergenic |
| ACCAAGATGTTACCCTTTGA+AGG | 0.390463 | 4.2:+90035744 | MS.gene75346:CDS |
| TTGGGAAGGCTGCTGTCTAC+TGG | 0.402887 | 4.2:+90036336 | MS.gene75346:CDS |
| ACCTCGTTAAAGAATTCAAT+TGG | 0.407330 | 4.2:-90039915 | None:intergenic |
| ATAGGTACAAGCTTCCTTCA+TGG | 0.408186 | 4.2:+90036300 | MS.gene75346:intron |
| GAATCAGAATCCACTTCAAT+TGG | 0.409503 | 4.2:-90040736 | None:intergenic |
| TCCTTCAAAGGGTAACATCT+TGG | 0.415937 | 4.2:-90035745 | None:intergenic |
| ATTGGTAATTTATCAAAAGA+AGG | 0.427374 | 4.2:+90040422 | MS.gene75346:CDS |
| TTCATATGTCTTTCCTTCAA+AGG | 0.436295 | 4.2:-90035757 | None:intergenic |
| TCATGGGCTATGTTTGAACT+TGG | 0.438144 | 4.2:+90036317 | MS.gene75346:CDS |
| AGTAGGAGCAACACCATTAG+TGG | 0.438267 | 4.2:-90036363 | None:intergenic |
| TCAATTGGCTTGTTCTGTAA+AGG | 0.440223 | 4.2:-90039900 | None:intergenic |
| TCCTTTCTGAGCATAGCTCT+TGG | 0.448560 | 4.2:-90039532 | None:intergenic |
| ATTTACAAATGGAGTAGATT+GGG | 0.448895 | 4.2:+90039842 | MS.gene75346:CDS |
| TCATATGTCTTTCCTTCAAA+GGG | 0.449365 | 4.2:-90035756 | None:intergenic |
| TTGGTAATTTATCAAAAGAA+GGG | 0.469450 | 4.2:+90040423 | MS.gene75346:CDS |
| TAGGTACAAGCTTCCTTCAT+GGG | 0.479108 | 4.2:+90036301 | MS.gene75346:intron |
| GGAGCAAGTTGAGCTGCAGC+TGG | 0.485205 | 4.2:-90036497 | None:intergenic |
| CATAGCATAACAAACACGTT+TGG | 0.489492 | 4.2:+90035121 | MS.gene75346:CDS |
| GTCTACTGGAAAACCACTAA+TGG | 0.489844 | 4.2:+90036350 | MS.gene75346:CDS |
| GGATCATACAAGGGCGAGCT+AGG | 0.494764 | 4.2:-90040685 | None:intergenic |
| AATATCATACTTACTGAAGT+AGG | 0.495204 | 4.2:-90036380 | None:intergenic |
| GCAGAGGAACTAAGTAAAGA+AGG | 0.513099 | 4.2:+90040341 | MS.gene75346:CDS |
| GGCTATGTTTGAACTTGGGA+AGG | 0.522989 | 4.2:+90036322 | MS.gene75346:CDS |
| GCAATTCCAAATTCTTCACT+AGG | 0.523402 | 4.2:-90036518 | None:intergenic |
| CTCGCCCTTGTATGATCCAA+TGG | 0.534387 | 4.2:+90040690 | MS.gene75346:CDS |
| CAAATATGTGTTCCTAAACA+TGG | 0.537560 | 4.2:+90039589 | MS.gene75346:CDS |
| CCATCATCCACATTAGCCAT+TGG | 0.540095 | 4.2:-90040706 | None:intergenic |
| CATGGGCTATGTTTGAACTT+GGG | 0.542521 | 4.2:+90036318 | MS.gene75346:CDS |
| CCAATGGCTAATGTGGATGA+TGG | 0.545754 | 4.2:+90040706 | MS.gene75346:CDS |
| ATTAGCCATTGGATCATACA+AGG | 0.545804 | 4.2:-90040695 | None:intergenic |
| TACTCTTGAATTTCTTCAGT+AGG | 0.550843 | 4.2:-90035823 | None:intergenic |
| TTTGTTGTAGGGCTTGGCAG+AGG | 0.558067 | 4.2:+90040325 | MS.gene75346:intron |
| GACAGAGAAGCAAGGTTGAG+TGG | 0.559534 | 4.2:-90035083 | None:intergenic |
| GCTATGCTCAGAAAGGATAG+AGG | 0.573110 | 4.2:+90039538 | MS.gene75346:CDS |
| TATTTGAATGCTGTATATAG+GGG | 0.579872 | 4.2:-90039572 | None:intergenic |
| GCGAACTGAATCTTGTTCCA+GGG | 0.581743 | 4.2:+90040653 | MS.gene75346:CDS |
| ACCAAGAGCTATGCTCAGAA+AGG | 0.582588 | 4.2:+90039531 | MS.gene75346:CDS |
| TGTAGTCAGTGCTGCTGCTG+CGG | 0.582718 | 4.2:+90035789 | MS.gene75346:CDS |
| TGGTAATTTATCAAAAGAAG+GGG | 0.588705 | 4.2:+90040424 | MS.gene75346:CDS |
| AGTTCAAACATAGCCCATGA+AGG | 0.591842 | 4.2:-90036314 | None:intergenic |
| AATCAACCAATTATGTGCGG+TGG | 0.594257 | 4.2:+90039505 | MS.gene75346:CDS |
| GTATGATCCAATGGCTAATG+TGG | 0.607801 | 4.2:+90040699 | MS.gene75346:CDS |
| ACAAATGGAGTAGATTGGGA+TGG | 0.618203 | 4.2:+90039846 | MS.gene75346:CDS |
| TGGATCATGTCCAATTGAAG+TGG | 0.628823 | 4.2:+90040726 | MS.gene75346:CDS |
| TTTAATCAACCAATTATGTG+CGG | 0.634307 | 4.2:+90039502 | MS.gene75346:CDS |
| TGTTATGCTATGACTACGAG+AGG | 0.652151 | 4.2:-90035110 | None:intergenic |
| GAGCTAGGATCGATGCACCC+TGG | 0.654050 | 4.2:-90040670 | None:intergenic |
| GCCAATTGAATTCTTTAACG+AGG | 0.659443 | 4.2:+90039914 | MS.gene75346:CDS |
| GAGGTTGTGACAGAGAAGCA+AGG | 0.671049 | 4.2:-90035091 | None:intergenic |
| TTAGCCATTGGATCATACAA+GGG | 0.708949 | 4.2:-90040694 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTACAATTTAAATAAGTTA+TGG | - | chr4.2:90036845-90036864 | None:intergenic | 10.0% |
| !!! | AAGTATTTATATTTTAATAG+TGG | + | chr4.2:90035229-90035248 | MS.gene75346:intron | 10.0% |
| !! | AAAACAATTGATATTCAAAA+CGG | + | chr4.2:90039052-90039071 | MS.gene75346:intron | 15.0% |
| !! | ATTAACCTACTATTAATTTA+TGG | - | chr4.2:90038453-90038472 | None:intergenic | 15.0% |
| !! | TAAAAAATATATCAGATAGT+TGG | - | chr4.2:90038932-90038951 | None:intergenic | 15.0% |
| !! | TAGAAATACAGAAAATATAA+AGG | + | chr4.2:90036095-90036114 | MS.gene75346:intron | 15.0% |
| !! | TATATCCTATTAATGTTTAT+AGG | + | chr4.2:90036282-90036301 | MS.gene75346:intron | 15.0% |
| !! | TATTATTGAGTTAATTCATT+TGG | + | chr4.2:90036399-90036418 | MS.gene75346:intron | 15.0% |
| !! | TTTGTTCATGTATTTATTTA+TGG | - | chr4.2:90036161-90036180 | None:intergenic | 15.0% |
| !!! | AATGATTGATTTATTAGTTA+TGG | - | chr4.2:90037491-90037510 | None:intergenic | 15.0% |
| !!! | ATATTTATTCTCTTTTCATA+AGG | + | chr4.2:90040475-90040494 | MS.gene75346:intron | 15.0% |
| !!! | ATTGTTTTTATAAGCTATAT+AGG | - | chr4.2:90038275-90038294 | None:intergenic | 15.0% |
| !!! | ATTTATATTTTAATAGTGGA+CGG | + | chr4.2:90035233-90035252 | MS.gene75346:intron | 15.0% |
| !!! | GTTGTAAAGTTTTTAAAAAA+GGG | - | chr4.2:90037309-90037328 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTATGATCAAGA+GGG | - | chr4.2:90040264-90040283 | None:intergenic | 15.0% |
| !!! | TGTTGTAAAGTTTTTAAAAA+AGG | - | chr4.2:90037310-90037329 | None:intergenic | 15.0% |
| !!! | TGTTTTTATAAATTTTGACA+GGG | + | chr4.2:90036449-90036468 | MS.gene75346:intron | 15.0% |
| !!! | TTATTTTTTTTATGATCAAG+AGG | - | chr4.2:90040265-90040284 | None:intergenic | 15.0% |
| !!! | TTGTTTTTATAAATTTTGAC+AGG | + | chr4.2:90036448-90036467 | MS.gene75346:intron | 15.0% |
| !!! | TTTATTATCATTAACCTTTT+TGG | - | chr4.2:90038738-90038757 | None:intergenic | 15.0% |
| !! | AAAAGAAAAAGAGAGAAAAA+AGG | - | chr4.2:90035156-90035175 | None:intergenic | 20.0% |
| !! | AAACAATTGATATTCAAAAC+GGG | + | chr4.2:90039053-90039072 | MS.gene75346:intron | 20.0% |
| !! | ACAAAAAAATTAATGATGGT+GGG | - | chr4.2:90039175-90039194 | None:intergenic | 20.0% |
| !! | AGACACAAAAAAATTAATGA+TGG | - | chr4.2:90039179-90039198 | None:intergenic | 20.0% |
| !! | AGATATTTCTTGAACAAAAA+TGG | + | chr4.2:90040057-90040076 | MS.gene75346:intron | 20.0% |
| !! | ATATTAGTTAGAAGTTGTAT+TGG | - | chr4.2:90037010-90037029 | None:intergenic | 20.0% |
| !! | ATATTTGAATGCTGTATATA+GGG | - | chr4.2:90039576-90039595 | None:intergenic | 20.0% |
| !! | ATCAAAATCATTGAAAATGA+AGG | + | chr4.2:90038589-90038608 | MS.gene75346:intron | 20.0% |
| !! | ATCAATTCAATGATATACTT+AGG | - | chr4.2:90035315-90035334 | None:intergenic | 20.0% |
| !! | CAAATGAAACAAATTACAAA+TGG | + | chr4.2:90039218-90039237 | MS.gene75346:intron | 20.0% |
| !! | TATTAGTTAGAAGTTGTATT+GGG | - | chr4.2:90037009-90037028 | None:intergenic | 20.0% |
| !! | TCAAAATCATTGAAAATGAA+GGG | + | chr4.2:90038590-90038609 | MS.gene75346:intron | 20.0% |
| !! | TGGTATTCTATTCTATAATA+TGG | - | chr4.2:90035434-90035453 | None:intergenic | 20.0% |
| !! | TTAAATCATTGTAATAGAGT+TGG | + | chr4.2:90040587-90040606 | MS.gene75346:intron | 20.0% |
| !! | TTACATTGGACAAAATTATT+CGG | + | chr4.2:90039734-90039753 | MS.gene75346:intron | 20.0% |
| !! | TTGTACCTATAAACATTAAT+AGG | - | chr4.2:90036290-90036309 | None:intergenic | 20.0% |
| !!! | AATATCATAGTCTAGTTTAA+TGG | - | chr4.2:90035454-90035473 | None:intergenic | 20.0% |
| !!! | AGAGAGAGTATATATTATTT+TGG | + | chr4.2:90036636-90036655 | MS.gene75346:intron | 20.0% |
| !!! | AGTTTTAATTTTGCATGTTT+AGG | + | chr4.2:90039475-90039494 | MS.gene75346:intron | 20.0% |
| !!! | AGTTTTGACTAAAATTACAT+TGG | + | chr4.2:90039720-90039739 | MS.gene75346:intron | 20.0% |
| !!! | ATTGATTTATTAGTTATGGA+AGG | - | chr4.2:90037487-90037506 | None:intergenic | 20.0% |
| !!! | ATTGGTAATTTATCAAAAGA+AGG | + | chr4.2:90040422-90040441 | MS.gene75346:CDS | 20.0% |
| !!! | ATTTTTTTTATGATCAAGAG+GGG | - | chr4.2:90040263-90040282 | None:intergenic | 20.0% |
| !!! | TACTATATAGTATTTTGATG+AGG | + | chr4.2:90036209-90036228 | MS.gene75346:intron | 20.0% |
| !!! | TATACTAGAGTTTTATCAAA+TGG | - | chr4.2:90037394-90037413 | None:intergenic | 20.0% |
| !!! | TATGTTACTTCAATTTCTAA+CGG | + | chr4.2:90039615-90039634 | MS.gene75346:intron | 20.0% |
| !!! | TATTCAAACATTTTTTAACC+AGG | - | chr4.2:90035595-90035614 | None:intergenic | 20.0% |
| !!! | TATTTTTTCTGAGAACTAAA+GGG | + | chr4.2:90039023-90039042 | MS.gene75346:intron | 20.0% |
| !!! | TTGATTTTCTCATTTACAAA+TGG | + | chr4.2:90039831-90039850 | MS.gene75346:CDS | 20.0% |
| !!! | TTGGTAATTTATCAAAAGAA+GGG | + | chr4.2:90040423-90040442 | MS.gene75346:CDS | 20.0% |
| !!! | TTTAAAAAAGGGATTAGTAA+AGG | - | chr4.2:90037298-90037317 | None:intergenic | 20.0% |
| !!! | TTTGGTACTTCTTTTTATTA+GGG | - | chr4.2:90036809-90036828 | None:intergenic | 20.0% |
| !!! | TTTTGGTACTTCTTTTTATT+AGG | - | chr4.2:90036810-90036829 | None:intergenic | 20.0% |
| ! | AAAGGTCAATTAACAAATGA+GGG | - | chr4.2:90037280-90037299 | None:intergenic | 25.0% |
| ! | AATAATCTGTTTATCCAAAC+AGG | + | chr4.2:90038413-90038432 | MS.gene75346:intron | 25.0% |
| ! | AATATCATACTTACTGAAGT+AGG | - | chr4.2:90036383-90036402 | None:intergenic | 25.0% |
| ! | ACATTAATAGGATATATGCT+AGG | - | chr4.2:90036278-90036297 | None:intergenic | 25.0% |
| ! | AGCTTACTAATAAATGTGTA+TGG | + | chr4.2:90036680-90036699 | MS.gene75346:intron | 25.0% |
| ! | AGTAACATATTACCATGTTT+AGG | - | chr4.2:90039604-90039623 | None:intergenic | 25.0% |
| ! | ATACAAAATGAAGACTTTGA+TGG | - | chr4.2:90037087-90037106 | None:intergenic | 25.0% |
| ! | ATACATTTGATCCGAATAAT+TGG | - | chr4.2:90037531-90037550 | None:intergenic | 25.0% |
| ! | ATAGAAAAATGTGCTATGAT+TGG | + | chr4.2:90040404-90040423 | MS.gene75346:CDS | 25.0% |
| ! | ATATTGTCTTGACTAGAATA+TGG | + | chr4.2:90039407-90039426 | MS.gene75346:intron | 25.0% |
| ! | ATTTACAAATGGAGTAGATT+GGG | + | chr4.2:90039842-90039861 | MS.gene75346:CDS | 25.0% |
| ! | CAAATAATTAGACAGTAAAC+TGG | + | chr4.2:90036039-90036058 | MS.gene75346:intron | 25.0% |
| ! | CAAATGGAACAAATTACAAA+TGG | - | chr4.2:90039091-90039110 | None:intergenic | 25.0% |
| ! | CAATGGAGAAAAGTTAATAT+AGG | + | chr4.2:90035879-90035898 | MS.gene75346:intron | 25.0% |
| ! | CACAAAAAAATTAATGATGG+TGG | - | chr4.2:90039176-90039195 | None:intergenic | 25.0% |
| ! | CATATTTGAATGCTGTATAT+AGG | - | chr4.2:90039577-90039596 | None:intergenic | 25.0% |
| ! | CGTCTAGAAAATTTATCTTT+AGG | + | chr4.2:90037430-90037449 | MS.gene75346:intron | 25.0% |
| ! | CTACTGCAATACAATTATTA+TGG | - | chr4.2:90036596-90036615 | None:intergenic | 25.0% |
| ! | GAAAGGATAAATCATACTTA+AGG | + | chr4.2:90035524-90035543 | MS.gene75346:intron | 25.0% |
| ! | GATAGACACAAAAAAATAAG+TGG | + | chr4.2:90039127-90039146 | MS.gene75346:intron | 25.0% |
| ! | GATTCATACTTTCTAATCTT+AGG | + | chr4.2:90037847-90037866 | MS.gene75346:intron | 25.0% |
| ! | GTATCAAAGTTACATGTATT+AGG | - | chr4.2:90038553-90038572 | None:intergenic | 25.0% |
| ! | GTCTTCCATAAATTAATAGT+AGG | + | chr4.2:90038445-90038464 | MS.gene75346:intron | 25.0% |
| ! | GTTCATGTATTTATTTATGG+TGG | - | chr4.2:90036158-90036177 | None:intergenic | 25.0% |
| ! | TAAAGGTCAATTAACAAATG+AGG | - | chr4.2:90037281-90037300 | None:intergenic | 25.0% |
| ! | TAATAAATGTGTATGGTTCA+GGG | + | chr4.2:90036687-90036706 | MS.gene75346:intron | 25.0% |
| ! | TACAACTGAGAATAGTAATA+TGG | - | chr4.2:90037674-90037693 | None:intergenic | 25.0% |
| ! | TACATTTGATCCGAATAATT+GGG | - | chr4.2:90037530-90037549 | None:intergenic | 25.0% |
| ! | TATCAAACGAATGTTCAAAT+GGG | + | chr4.2:90037548-90037567 | MS.gene75346:intron | 25.0% |
| ! | TATTTGAATGCTGTATATAG+GGG | - | chr4.2:90039575-90039594 | None:intergenic | 25.0% |
| ! | TCAAAGAAAAGCAAAAAGAA+TGG | + | chr4.2:90038624-90038643 | MS.gene75346:intron | 25.0% |
| ! | TCTTTCTTATGTTATCTACA+AGG | - | chr4.2:90036896-90036915 | None:intergenic | 25.0% |
| ! | TGGTAATTTATCAAAAGAAG+GGG | + | chr4.2:90040424-90040443 | MS.gene75346:CDS | 25.0% |
| ! | TTACTGTCTAATTATTTGAG+TGG | - | chr4.2:90036037-90036056 | None:intergenic | 25.0% |
| ! | TTTAATCAACCAATTATGTG+CGG | + | chr4.2:90039502-90039521 | MS.gene75346:CDS | 25.0% |
| !! | AAGATTAGAAAGTATGAATC+TGG | - | chr4.2:90037847-90037866 | None:intergenic | 25.0% |
| !! | AGATTAGATGGTTTAGATTT+TGG | + | chr4.2:90040129-90040148 | MS.gene75346:intron | 25.0% |
| !! | ATTGAGAAAGAATAACCTTT+TGG | - | chr4.2:90037115-90037134 | None:intergenic | 25.0% |
| !! | ATTTGATTATTTGTTGACTG+AGG | + | chr4.2:90035268-90035287 | MS.gene75346:intron | 25.0% |
| !! | ATTTTCATTTGAGAATTGCT+AGG | - | chr4.2:90038026-90038045 | None:intergenic | 25.0% |
| !! | CTTGTGAAAATAAGTTGAAA+AGG | - | chr4.2:90038248-90038267 | None:intergenic | 25.0% |
| !! | GCTCTTTTTGATGTTATTAA+TGG | - | chr4.2:90036870-90036889 | None:intergenic | 25.0% |
| !! | GTGTATTATTCTTTGTTGTA+GGG | + | chr4.2:90040314-90040333 | MS.gene75346:intron | 25.0% |
| !! | TATGGCTCTTTTTGAATTTT+TGG | - | chr4.2:90036827-90036846 | None:intergenic | 25.0% |
| !! | TGATGTTATTGATTAGTACA+TGG | - | chr4.2:90036920-90036939 | None:intergenic | 25.0% |
| !! | TGTGTATTATTCTTTGTTGT+AGG | + | chr4.2:90040313-90040332 | MS.gene75346:intron | 25.0% |
| !! | TTGGTACTTCTTTTTATTAG+GGG | - | chr4.2:90036808-90036827 | None:intergenic | 25.0% |
| !! | TTGTTTCATTTGTTGCAATT+TGG | - | chr4.2:90039210-90039229 | None:intergenic | 25.0% |
| !!! | ACTAAAGTAGTTTGAGTTTT+TGG | - | chr4.2:90036969-90036988 | None:intergenic | 25.0% |
| !!! | GAATTTGGAATTGCTTTTAA+TGG | + | chr4.2:90036527-90036546 | MS.gene75346:CDS | 25.0% |
| !!! | GTATTTTTTCTGAGAACTAA+AGG | + | chr4.2:90039022-90039041 | MS.gene75346:intron | 25.0% |
| !!! | GTTTTAAAAACTGACTCAAA+CGG | - | chr4.2:90036070-90036089 | None:intergenic | 25.0% |
| !!! | TATAGTATTTTGATGAGGTT+AGG | + | chr4.2:90036214-90036233 | MS.gene75346:intron | 25.0% |
| !!! | TGATATTTTAAGCAAAGTCT+CGG | + | chr4.2:90035467-90035486 | MS.gene75346:intron | 25.0% |
| !!! | TGCAAATTTTGATACATTGA+AGG | + | chr4.2:90038838-90038857 | MS.gene75346:intron | 25.0% |
| !!! | TTTAATTTTGCATGTTTAGG+TGG | + | chr4.2:90039478-90039497 | MS.gene75346:intron | 25.0% |
| AAGCAAAAAGAATGGAAGTT+TGG | + | chr4.2:90038632-90038651 | MS.gene75346:intron | 30.0% | |
| AATAAATGTGTATGGTTCAG+GGG | + | chr4.2:90036688-90036707 | MS.gene75346:intron | 30.0% | |
| AATCTGCAGGATAATGTTAA+TGG | - | chr4.2:90037592-90037611 | None:intergenic | 30.0% | |
| AATGTTGATCTGGAAAATAG+AGG | - | chr4.2:90037643-90037662 | None:intergenic | 30.0% | |
| AATTTATGGAAGACAACGAT+AGG | - | chr4.2:90038439-90038458 | None:intergenic | 30.0% | |
| ACCAAATGTTGGATTTACAA+TGG | + | chr4.2:90035862-90035881 | MS.gene75346:intron | 30.0% | |
| ACCCATTCAAAACTACAAAT+AGG | + | chr4.2:90039252-90039271 | MS.gene75346:intron | 30.0% | |
| ACCTCGTTAAAGAATTCAAT+TGG | - | chr4.2:90039918-90039937 | None:intergenic | 30.0% | |
| ACTGAAAACTAATCCTCATT+TGG | - | chr4.2:90035564-90035583 | None:intergenic | 30.0% | |
| ACTTGAAATTGCAGTCTATA+TGG | - | chr4.2:90039873-90039892 | None:intergenic | 30.0% | |
| AGACACAAAAAAATAAGTGG+TGG | + | chr4.2:90039130-90039149 | MS.gene75346:intron | 30.0% | |
| AGCAAAAAGAATGGAAGTTT+GGG | + | chr4.2:90038633-90038652 | MS.gene75346:intron | 30.0% | |
| AGGATAAATCATACTTAAGG+TGG | + | chr4.2:90035527-90035546 | MS.gene75346:intron | 30.0% | |
| AGTAAACTAGACCATAGTTA+GGG | + | chr4.2:90036717-90036736 | MS.gene75346:intron | 30.0% | |
| AGTCTCTGATGTTAAAATGT+TGG | - | chr4.2:90038802-90038821 | None:intergenic | 30.0% | |
| ATCCAACATTTGGTATTAAG+TGG | - | chr4.2:90035856-90035875 | None:intergenic | 30.0% | |
| ATGGTAAGAATATGACTACT+TGG | - | chr4.2:90037198-90037217 | None:intergenic | 30.0% | |
| ATTTAAAGAGCAACTACAAG+TGG | - | chr4.2:90040573-90040592 | None:intergenic | 30.0% | |
| CAAATATGTGTTCCTAAACA+TGG | + | chr4.2:90039589-90039608 | MS.gene75346:CDS | 30.0% | |
| CAAATTACAATAGGTCTGTT+TGG | + | chr4.2:90038133-90038152 | MS.gene75346:intron | 30.0% | |
| CACTCTGATAATTCATAGTT+CGG | - | chr4.2:90039003-90039022 | None:intergenic | 30.0% | |
| CATTCAAAACTACAAATAGG+GGG | + | chr4.2:90039255-90039274 | MS.gene75346:intron | 30.0% | |
| CATTTACAAATGGAGTAGAT+TGG | + | chr4.2:90039841-90039860 | MS.gene75346:CDS | 30.0% | |
| CCATTCAAAACTACAAATAG+GGG | + | chr4.2:90039254-90039273 | MS.gene75346:intron | 30.0% | |
| CCCATTCAAAACTACAAATA+GGG | + | chr4.2:90039253-90039272 | MS.gene75346:intron | 30.0% | |
| CTAATAAATGTGTATGGTTC+AGG | + | chr4.2:90036686-90036705 | MS.gene75346:intron | 30.0% | |
| GAAAAAAAAACGTGGTTGAA+AGG | + | chr4.2:90035507-90035526 | MS.gene75346:intron | 30.0% | |
| GAAACAAATTACAAATGGAG+AGG | + | chr4.2:90039223-90039242 | MS.gene75346:intron | 30.0% | |
| GACACAAAAAAATAAGTGGT+GGG | + | chr4.2:90039131-90039150 | MS.gene75346:intron | 30.0% | |
| GAGTTTATTCAATCTCAAAG+AGG | - | chr4.2:90037790-90037809 | None:intergenic | 30.0% | |
| GCCATTAGATGAAGATTAAA+CGG | - | chr4.2:90040195-90040214 | None:intergenic | 30.0% | |
| GGATAATGAAAATGTTGATC+TGG | - | chr4.2:90037653-90037672 | None:intergenic | 30.0% | |
| GTATCAAACGAATGTTCAAA+TGG | + | chr4.2:90037547-90037566 | MS.gene75346:intron | 30.0% | |
| GTCATAACATGAAGATTAGA+TGG | + | chr4.2:90040117-90040136 | MS.gene75346:intron | 30.0% | |
| GTTTAATCTTCATCTAATGG+CGG | + | chr4.2:90040194-90040213 | MS.gene75346:intron | 30.0% | |
| TAATGAAGATGATAATCTGC+AGG | - | chr4.2:90037605-90037624 | None:intergenic | 30.0% | |
| TACTCTTGAATTTCTTCAGT+AGG | - | chr4.2:90035826-90035845 | None:intergenic | 30.0% | |
| TAGTAAACTAGACCATAGTT+AGG | + | chr4.2:90036716-90036735 | MS.gene75346:intron | 30.0% | |
| TCAAAAGATTAAGCCAAAAG+AGG | + | chr4.2:90038083-90038102 | MS.gene75346:intron | 30.0% | |
| TCATACTTTCTAATCTTAGG+AGG | + | chr4.2:90037850-90037869 | MS.gene75346:intron | 30.0% | |
| TCATATGTCTTTCCTTCAAA+GGG | - | chr4.2:90035759-90035778 | None:intergenic | 30.0% | |
| TCCAACATTTGGTATTAAGT+GGG | - | chr4.2:90035855-90035874 | None:intergenic | 30.0% | |
| TCCATTGTAAATCCAACATT+TGG | - | chr4.2:90035866-90035885 | None:intergenic | 30.0% | |
| TCGTAGATGAAAAAAAAACG+TGG | + | chr4.2:90035499-90035518 | MS.gene75346:intron | 30.0% | |
| TCTCTGCTACAAATTACAAT+AGG | + | chr4.2:90038124-90038143 | MS.gene75346:intron | 30.0% | |
| TGTTGAAATTCTTGCAAATG+TGG | - | chr4.2:90037698-90037717 | None:intergenic | 30.0% | |
| TTCATATGTCTTTCCTTCAA+AGG | - | chr4.2:90035760-90035779 | None:intergenic | 30.0% | |
| TTGGATCGTCTTAAACAATT+TGG | + | chr4.2:90036754-90036773 | MS.gene75346:intron | 30.0% | |
| ! | ACAACGGAAAAATCTCTTTT+AGG | + | chr4.2:90037460-90037479 | MS.gene75346:intron | 30.0% |
| ! | AGTTTTCAGTTAAGTAAACC+TGG | + | chr4.2:90035574-90035593 | MS.gene75346:intron | 30.0% |
| ! | ATGGTCGAAAAAATCTTTTC+AGG | + | chr4.2:90040621-90040640 | MS.gene75346:intron | 30.0% |
| ! | CATTTTGTATTGTCTCCAAA+AGG | + | chr4.2:90037097-90037116 | MS.gene75346:intron | 30.0% |
| ! | TGATTTTCAACAGGAATTTG+TGG | + | chr4.2:90037736-90037755 | MS.gene75346:intron | 30.0% |
| ! | TGGTCGAAAAAATCTTTTCA+GGG | + | chr4.2:90040622-90040641 | MS.gene75346:intron | 30.0% |
| ! | TTGTTCCATTTGTTGCAATT+TGG | + | chr4.2:90039099-90039118 | MS.gene75346:intron | 30.0% |
| ! | TTTAGTGATTGGTCACATAT+TGG | - | chr4.2:90037256-90037275 | None:intergenic | 30.0% |
| !! | TGGCTTAATCTTTTGATTCT+AGG | - | chr4.2:90038079-90038098 | None:intergenic | 30.0% |
| !!! | CAGTGTTTTGAAAACTGAAA+TGG | + | chr4.2:90035935-90035954 | MS.gene75346:intron | 30.0% |
| !!! | CCCTATTTGTAGTTTTGAAT+GGG | - | chr4.2:90039256-90039275 | None:intergenic | 30.0% |
| !!! | TTTTTTGTTTGAGGCCAAAA+AGG | + | chr4.2:90038721-90038740 | MS.gene75346:intron | 30.0% |
| ACTACTCATTACACACTCAT+GGG | + | chr4.2:90038870-90038889 | MS.gene75346:intron | 35.0% | |
| AGTAGTGAGTGAGAAATATC+AGG | - | chr4.2:90037911-90037930 | None:intergenic | 35.0% | |
| AGTTTGAGAGAAGATGAGAA+CGG | + | chr4.2:90038685-90038704 | MS.gene75346:intron | 35.0% | |
| ATTAGCCATTGGATCATACA+AGG | - | chr4.2:90040698-90040717 | None:intergenic | 35.0% | |
| CAGTCTCAAAACACTTATGT+AGG | - | chr4.2:90038182-90038201 | None:intergenic | 35.0% | |
| CATAGCATAACAAACACGTT+TGG | + | chr4.2:90035121-90035140 | MS.gene75346:CDS | 35.0% | |
| CCTGTTGAAAATCAGAATGT+TGG | - | chr4.2:90037730-90037749 | None:intergenic | 35.0% | |
| CTAATCTTAGGAGGAATCTT+AGG | + | chr4.2:90037859-90037878 | MS.gene75346:intron | 35.0% | |
| CTGCAAAAGAATCAGACTAT+TGG | - | chr4.2:90037157-90037176 | None:intergenic | 35.0% | |
| GAATCAGAATCCACTTCAAT+TGG | - | chr4.2:90040739-90040758 | None:intergenic | 35.0% | |
| GCAAAAAGAATGGAAGTTTG+GGG | + | chr4.2:90038634-90038653 | MS.gene75346:intron | 35.0% | |
| GCAATTCCAAATTCTTCACT+AGG | - | chr4.2:90036521-90036540 | None:intergenic | 35.0% | |
| GCCAATTGAATTCTTTAACG+AGG | + | chr4.2:90039914-90039933 | MS.gene75346:CDS | 35.0% | |
| GCCGTTTAATCTTCATCTAA+TGG | + | chr4.2:90040191-90040210 | MS.gene75346:intron | 35.0% | |
| GGAACAAATTACAAATGGAG+AGG | - | chr4.2:90039086-90039105 | None:intergenic | 35.0% | |
| GTTTGAATTGACAGTGAGTT+TGG | + | chr4.2:90039654-90039673 | MS.gene75346:intron | 35.0% | |
| TACACTATTTCACGACTACA+AGG | + | chr4.2:90040229-90040248 | MS.gene75346:intron | 35.0% | |
| TAGGGTCGTCTTAAACAATT+TGG | + | chr4.2:90036735-90036754 | MS.gene75346:intron | 35.0% | |
| TCCCACTTAATACCAAATGT+TGG | + | chr4.2:90035851-90035870 | MS.gene75346:intron | 35.0% | |
| TCTCTCCAAATTGCAACAAA+TGG | - | chr4.2:90039221-90039202 | None:intergenic | 35.0% | |
| TTAGCCATTGGATCATACAA+GGG | - | chr4.2:90040697-90040716 | None:intergenic | 35.0% | |
| TTTAAATCACTCGAGCAAAG+AGG | + | chr4.2:90035998-90036017 | MS.gene75346:intron | 35.0% | |
| ! | AGAGATTTTTCCGTTGTGAA+TGG | - | chr4.2:90037457-90037476 | None:intergenic | 35.0% |
| ! | CCAACATTCTGATTTTCAAC+AGG | + | chr4.2:90037727-90037746 | MS.gene75346:intron | 35.0% |
| ! | TTATTCTTTGTTGTAGGGCT+TGG | + | chr4.2:90040319-90040338 | MS.gene75346:intron | 35.0% |
| !! | ATCTTTAGGACCATTCACAA+CGG | + | chr4.2:90037444-90037463 | MS.gene75346:intron | 35.0% |
| !! | CAAATGAGGGTTTTAGTGAT+TGG | - | chr4.2:90037267-90037286 | None:intergenic | 35.0% |
| !! | TCAAGAGCATCCCAATTATT+CGG | + | chr4.2:90037517-90037536 | MS.gene75346:intron | 35.0% |
| !! | TCAATTGGCTTGTTCTGTAA+AGG | - | chr4.2:90039903-90039922 | None:intergenic | 35.0% |
| !!! | AGAGTTGGTTTTCTAAACGA+TGG | + | chr4.2:90040602-90040621 | MS.gene75346:intron | 35.0% |
| !!! | CCCCTATTTGTAGTTTTGAA+TGG | - | chr4.2:90039257-90039276 | None:intergenic | 35.0% |
| !!! | TCGACTGAGTTTTTTGTTTG+AGG | + | chr4.2:90038712-90038731 | MS.gene75346:intron | 35.0% |
| !!! | TGAGTTTTTGGTGCTTCATT+TGG | - | chr4.2:90036957-90036976 | None:intergenic | 35.0% |
| AATCAACCAATTATGTGCGG+TGG | + | chr4.2:90039505-90039524 | MS.gene75346:CDS | 40.0% | |
| ACAAATGGAGTAGATTGGGA+TGG | + | chr4.2:90039846-90039865 | MS.gene75346:CDS | 40.0% | |
| ACCAAGATGTTACCCTTTGA+AGG | + | chr4.2:90035744-90035763 | MS.gene75346:CDS | 40.0% | |
| AGTTCAAACATAGCCCATGA+AGG | - | chr4.2:90036317-90036336 | None:intergenic | 40.0% | |
| ATAGGTACAAGCTTCCTTCA+TGG | + | chr4.2:90036300-90036319 | MS.gene75346:intron | 40.0% | |
| ATCTTAGGAGGAATCTTAGG+AGG | + | chr4.2:90037862-90037881 | MS.gene75346:intron | 40.0% | |
| CACATGACCAATTGCAAAGA+GGG | - | chr4.2:90035193-90035212 | None:intergenic | 40.0% | |
| CACTTCATAGTTTCTGATGC+AGG | + | chr4.2:90035697-90035716 | MS.gene75346:intron | 40.0% | |
| CTTGCTCCTAGTGAAGAATT+TGG | + | chr4.2:90036512-90036531 | MS.gene75346:CDS | 40.0% | |
| GACTACTCATTACACACTCA+TGG | + | chr4.2:90038869-90038888 | MS.gene75346:intron | 40.0% | |
| GCAGAGGAACTAAGTAAAGA+AGG | + | chr4.2:90040341-90040360 | MS.gene75346:CDS | 40.0% | |
| GGATGCTTACATGTTGAATG+CGG | + | chr4.2:90038655-90038674 | MS.gene75346:intron | 40.0% | |
| GTATGATCCAATGGCTAATG+TGG | + | chr4.2:90040699-90040718 | MS.gene75346:CDS | 40.0% | |
| GTCATTGAACCATGACTAGA+AGG | - | chr4.2:90035978-90035997 | None:intergenic | 40.0% | |
| GTCTACTGGAAAACCACTAA+TGG | + | chr4.2:90036350-90036369 | MS.gene75346:CDS | 40.0% | |
| GTTAATGGCAATGTAGAGCA+GGG | - | chr4.2:90037577-90037596 | None:intergenic | 40.0% | |
| GTTATGACTGAGATTGCAAG+TGG | - | chr4.2:90040105-90040124 | None:intergenic | 40.0% | |
| TAGGTACAAGCTTCCTTCAT+GGG | + | chr4.2:90036301-90036320 | MS.gene75346:intron | 40.0% | |
| TCCTTCAAAGGGTAACATCT+TGG | - | chr4.2:90035748-90035767 | None:intergenic | 40.0% | |
| TCTATAACTGCAGTTGTGTC+TGG | - | chr4.2:90040389-90040408 | None:intergenic | 40.0% | |
| TGGATCATGTCCAATTGAAG+TGG | + | chr4.2:90040726-90040745 | MS.gene75346:CDS | 40.0% | |
| TGTTAATGGCAATGTAGAGC+AGG | - | chr4.2:90037578-90037597 | None:intergenic | 40.0% | |
| TGTTATGCTATGACTACGAG+AGG | - | chr4.2:90035113-90035132 | None:intergenic | 40.0% | |
| ! | AGAGAAAGAGGATCCTCTTT+TGG | - | chr4.2:90038099-90038118 | None:intergenic | 40.0% |
| ! | AGTGATTGGTCACATATTGG+TGG | - | chr4.2:90037253-90037272 | None:intergenic | 40.0% |
| ! | CATGGGCTATGTTTGAACTT+GGG | + | chr4.2:90036318-90036337 | MS.gene75346:CDS | 40.0% |
| ! | GAGAGAAGTGTGATAGAGAT+TGG | - | chr4.2:90037372-90037391 | None:intergenic | 40.0% |
| ! | GCAATTGGTCATGTGGATTA+TGG | + | chr4.2:90035198-90035217 | MS.gene75346:intron | 40.0% |
| ! | GTTTAAGACGACCCTAACTA+TGG | - | chr4.2:90036731-90036750 | None:intergenic | 40.0% |
| ! | TCATGGGCTATGTTTGAACT+TGG | + | chr4.2:90036317-90036336 | MS.gene75346:CDS | 40.0% |
| !! | GGCTTGTTCTGTAAAGGTTT+TGG | - | chr4.2:90039897-90039916 | None:intergenic | 40.0% |
| AAGACAACGATAGGCCTGTT+TGG | - | chr4.2:90038430-90038449 | None:intergenic | 45.0% | |
| ACCAAGAGCTATGCTCAGAA+AGG | + | chr4.2:90039531-90039550 | MS.gene75346:CDS | 45.0% | |
| AGTAGGAGCAACACCATTAG+TGG | - | chr4.2:90036366-90036385 | None:intergenic | 45.0% | |
| CATACTTAAGGTGGTCAACG+AGG | + | chr4.2:90035536-90035555 | MS.gene75346:intron | 45.0% | |
| CCAATGGCTAATGTGGATGA+TGG | + | chr4.2:90040706-90040725 | MS.gene75346:CDS | 45.0% | |
| CCACATGACCAATTGCAAAG+AGG | - | chr4.2:90035194-90035213 | None:intergenic | 45.0% | |
| CCATCATCCACATTAGCCAT+TGG | - | chr4.2:90040709-90040728 | None:intergenic | 45.0% | |
| CCTCTTTGCAATTGGTCATG+TGG | + | chr4.2:90035191-90035210 | MS.gene75346:intron | 45.0% | |
| CTTGGTATGAGTTGCGTCAA+AGG | - | chr4.2:90037180-90037199 | None:intergenic | 45.0% | |
| GAACCATGACTAGAAGGTCT+CGG | - | chr4.2:90035972-90035991 | None:intergenic | 45.0% | |
| GCGAACTGAATCTTGTTCCA+GGG | + | chr4.2:90040653-90040672 | MS.gene75346:CDS | 45.0% | |
| GCTATGCTCAGAAAGGATAG+AGG | + | chr4.2:90039538-90039557 | MS.gene75346:CDS | 45.0% | |
| GGCTATGTTTGAACTTGGGA+AGG | + | chr4.2:90036322-90036341 | MS.gene75346:CDS | 45.0% | |
| TCATGGGCTCATTCTACACT+TGG | + | chr4.2:90038886-90038905 | MS.gene75346:intron | 45.0% | |
| TCCTTTCTGAGCATAGCTCT+TGG | - | chr4.2:90039535-90039554 | None:intergenic | 45.0% | |
| TGCGAACTGAATCTTGTTCC+AGG | + | chr4.2:90040652-90040671 | MS.gene75346:CDS | 45.0% | |
| ! | AGACTTAGAGAGCATGAGAG+AGG | - | chr4.2:90037229-90037248 | None:intergenic | 45.0% |
| ! | GACTTAGAGAGCATGAGAGA+GGG | - | chr4.2:90037228-90037247 | None:intergenic | 45.0% |
| !! | AATAAATAATAATAACTTAA+TGG | + | chr4.2:90040280-90040299 | MS.gene75346:intron | 5.0% |
| !! | ATAATAAATAAGTATATTAA+AGG | + | chr4.2:90038750-90038769 | MS.gene75346:intron | 5.0% |
| ACACGACGTTCTCTTCAGCT+AGG | + | chr4.2:90037963-90037982 | MS.gene75346:intron | 50.0% | |
| CAGCTAGGAATTGAGCGTGA+AGG | + | chr4.2:90037978-90037997 | MS.gene75346:intron | 50.0% | |
| CATGAGAGAGGGATGGAACA+TGG | - | chr4.2:90037217-90037236 | None:intergenic | 50.0% | |
| CTCGCCCTTGTATGATCCAA+TGG | + | chr4.2:90040690-90040709 | MS.gene75346:CDS | 50.0% | |
| GACAGAGAAGCAAGGTTGAG+TGG | - | chr4.2:90035086-90035105 | None:intergenic | 50.0% | |
| GAGGTTGTGACAGAGAAGCA+AGG | - | chr4.2:90035094-90035113 | None:intergenic | 50.0% | |
| GAGTGCACCCTCTTTGCAAT+TGG | + | chr4.2:90035183-90035202 | MS.gene75346:intron | 50.0% | |
| GCAGAGAGAGAGAGAGAAAG+AGG | - | chr4.2:90038111-90038130 | None:intergenic | 50.0% | |
| GGTCAACGAGGTTCCAAATG+AGG | + | chr4.2:90035548-90035567 | MS.gene75346:intron | 50.0% | |
| GGTGGGATCCACTTAGTGAT+AGG | - | chr4.2:90039158-90039177 | None:intergenic | 50.0% | |
| GGTTCACCACCGCACATAAT+TGG | - | chr4.2:90039514-90039533 | None:intergenic | 50.0% | |
| ! | TAGAGAGCATGAGAGAGGGA+TGG | - | chr4.2:90037224-90037243 | None:intergenic | 50.0% |
| ! | TGGTGGGTCCTATCACTAAG+TGG | + | chr4.2:90039147-90039166 | MS.gene75346:intron | 50.0% |
| ! | TTTGTTGTAGGGCTTGGCAG+AGG | + | chr4.2:90040325-90040344 | MS.gene75346:intron | 50.0% |
| GGATCATACAAGGGCGAGCT+AGG | - | chr4.2:90040688-90040707 | None:intergenic | 55.0% | |
| TCGCCGAGACCTTCTAGTCA+TGG | + | chr4.2:90035966-90035985 | MS.gene75346:intron | 55.0% | |
| TTGGGAAGGCTGCTGTCTAC+TGG | + | chr4.2:90036336-90036355 | MS.gene75346:CDS | 55.0% | |
| ! | TGTAGTCAGTGCTGCTGCTG+CGG | + | chr4.2:90035789-90035808 | MS.gene75346:CDS | 55.0% |
| GAGCTAGGATCGATGCACCC+TGG | - | chr4.2:90040673-90040692 | None:intergenic | 60.0% | |
| ! | GGAGCAAGTTGAGCTGCAGC+TGG | - | chr4.2:90036500-90036519 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 90035049 | 90040768 | 90035049 | ID=MS.gene75346 |
| chr4.2 | mRNA | 90035049 | 90040768 | 90035049 | ID=MS.gene75346.t1;Parent=MS.gene75346 |
| chr4.2 | exon | 90035049 | 90035142 | 90035049 | ID=MS.gene75346.t1.exon1;Parent=MS.gene75346.t1 |
| chr4.2 | CDS | 90035049 | 90035142 | 90035049 | ID=cds.MS.gene75346.t1;Parent=MS.gene75346.t1 |
| chr4.2 | exon | 90035719 | 90035842 | 90035719 | ID=MS.gene75346.t1.exon2;Parent=MS.gene75346.t1 |
| chr4.2 | CDS | 90035719 | 90035842 | 90035719 | ID=cds.MS.gene75346.t1;Parent=MS.gene75346.t1 |
| chr4.2 | exon | 90036304 | 90036388 | 90036304 | ID=MS.gene75346.t1.exon3;Parent=MS.gene75346.t1 |
| chr4.2 | CDS | 90036304 | 90036388 | 90036304 | ID=cds.MS.gene75346.t1;Parent=MS.gene75346.t1 |
| chr4.2 | exon | 90036470 | 90036548 | 90036470 | ID=MS.gene75346.t1.exon4;Parent=MS.gene75346.t1 |
| chr4.2 | CDS | 90036470 | 90036548 | 90036470 | ID=cds.MS.gene75346.t1;Parent=MS.gene75346.t1 |
| chr4.2 | exon | 90039497 | 90039610 | 90039497 | ID=MS.gene75346.t1.exon5;Parent=MS.gene75346.t1 |
| chr4.2 | CDS | 90039497 | 90039610 | 90039497 | ID=cds.MS.gene75346.t1;Parent=MS.gene75346.t1 |
| chr4.2 | exon | 90039823 | 90039935 | 90039823 | ID=MS.gene75346.t1.exon6;Parent=MS.gene75346.t1 |
| chr4.2 | CDS | 90039823 | 90039935 | 90039823 | ID=cds.MS.gene75346.t1;Parent=MS.gene75346.t1 |
| chr4.2 | exon | 90040335 | 90040445 | 90040335 | ID=MS.gene75346.t1.exon7;Parent=MS.gene75346.t1 |
| chr4.2 | CDS | 90040335 | 90040445 | 90040335 | ID=cds.MS.gene75346.t1;Parent=MS.gene75346.t1 |
| chr4.2 | exon | 90040643 | 90040768 | 90040643 | ID=MS.gene75346.t1.exon8;Parent=MS.gene75346.t1 |
| chr4.2 | CDS | 90040643 | 90040768 | 90040643 | ID=cds.MS.gene75346.t1;Parent=MS.gene75346.t1 |
| Gene Sequence |
| Protein sequence |
