Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77220.t1 | GAU18437.1 | 64.7 | 289 | 98 | 3 | 3 | 291 | 16 | 300 | 4.40E-96 | 361.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77220.t1 | Q6AVI0 | 30.7 | 267 | 172 | 4 | 6 | 271 | 284 | 538 | 3.6e-30 | 133.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77220.t1 | A0A2Z6MJF8 | 64.7 | 289 | 98 | 3 | 3 | 291 | 16 | 300 | 3.1e-96 | 361.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene77220 | 0.825368 | 4.87E-54 | -1.69E-46 |
| MS.gene049435 | MS.gene77220 | 0.823834 | 1.12E-53 | -1.69E-46 |
| MS.gene049530 | MS.gene77220 | 0.800026 | 1.75E-48 | -1.69E-46 |
| MS.gene049669 | MS.gene77220 | 0.803769 | 2.98E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene77220 | 0.82468 | 7.08E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene77220 | 0.810128 | 1.34E-50 | -1.69E-46 |
| MS.gene050561 | MS.gene77220 | 0.801386 | 9.23E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene77220 | 0.802727 | 4.89E-49 | -1.69E-46 |
| MS.gene05125 | MS.gene77220 | 0.805279 | 1.44E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene77220 | 0.804638 | 1.96E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene77220 | 0.814021 | 1.90E-51 | -1.69E-46 |
| MS.gene051800 | MS.gene77220 | 0.800923 | 1.15E-48 | -1.69E-46 |
| MS.gene052037 | MS.gene77220 | 0.808391 | 3.17E-50 | -1.69E-46 |
| MS.gene052239 | MS.gene77220 | -0.815277 | 1.00E-51 | -1.69E-46 |
| MS.gene052447 | MS.gene77220 | 0.844603 | 6.82E-59 | -1.69E-46 |
| MS.gene052519 | MS.gene77220 | 0.802416 | 5.67E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene77220 | 0.801213 | 1.00E-48 | -1.69E-46 |
| MS.gene052584 | MS.gene77220 | 0.808701 | 2.72E-50 | -1.69E-46 |
| MS.gene052677 | MS.gene77220 | 0.800992 | 1.11E-48 | -1.69E-46 |
| MS.gene052773 | MS.gene77220 | 0.800054 | 1.73E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene77220 | 0.817338 | 3.47E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene77220 | 0.811541 | 6.65E-51 | -1.69E-46 |
| MS.gene053974 | MS.gene77220 | 0.817734 | 2.83E-52 | -1.69E-46 |
| MS.gene053998 | MS.gene77220 | 0.813517 | 2.46E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene77220 | 0.801025 | 1.09E-48 | -1.69E-46 |
| MS.gene05415 | MS.gene77220 | 0.838545 | 2.70E-57 | -1.69E-46 |
| MS.gene054236 | MS.gene77220 | 0.81071 | 1.01E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene77220 | 0.822397 | 2.42E-53 | -1.69E-46 |
| MS.gene054291 | MS.gene77220 | -0.840641 | 7.69E-58 | -1.69E-46 |
| MS.gene054651 | MS.gene77220 | 0.816254 | 6.08E-52 | -1.69E-46 |
| MS.gene055227 | MS.gene77220 | 0.819398 | 1.19E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene77220 | 0.811951 | 5.42E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene77220 | 0.831221 | 1.89E-55 | -1.69E-46 |
| MS.gene055875 | MS.gene77220 | 0.801959 | 7.04E-49 | -1.69E-46 |
| MS.gene055926 | MS.gene77220 | 0.809962 | 1.46E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene77220 | 0.812449 | 4.22E-51 | -1.69E-46 |
| MS.gene056162 | MS.gene77220 | 0.808692 | 2.73E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene77220 | 0.869325 | 3.37E-66 | -1.69E-46 |
| MS.gene056252 | MS.gene77220 | 0.807479 | 4.95E-50 | -1.69E-46 |
| MS.gene056498 | MS.gene77220 | 0.805093 | 1.58E-49 | -1.69E-46 |
| MS.gene056776 | MS.gene77220 | 0.802358 | 5.83E-49 | -1.69E-46 |
| MS.gene056873 | MS.gene77220 | 0.812439 | 4.24E-51 | -1.69E-46 |
| MS.gene057414 | MS.gene77220 | 0.800364 | 1.49E-48 | -1.69E-46 |
| MS.gene057444 | MS.gene77220 | 0.830919 | 2.24E-55 | -1.69E-46 |
| MS.gene057598 | MS.gene77220 | 0.823759 | 1.17E-53 | -1.69E-46 |
| MS.gene057855 | MS.gene77220 | 0.818253 | 2.16E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene77220 | 0.817037 | 4.06E-52 | -1.69E-46 |
| MS.gene058028 | MS.gene77220 | 0.819894 | 9.14E-53 | -1.69E-46 |
| MS.gene058294 | MS.gene77220 | 0.854756 | 9.96E-62 | -1.69E-46 |
| MS.gene058515 | MS.gene77220 | 0.808262 | 3.38E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene77220 | 0.810491 | 1.12E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene77220 | 0.836187 | 1.08E-56 | -1.69E-46 |
| MS.gene059272 | MS.gene77220 | 0.827287 | 1.70E-54 | -1.69E-46 |
| MS.gene059459 | MS.gene77220 | 0.817745 | 2.81E-52 | -1.69E-46 |
| MS.gene059584 | MS.gene77220 | 0.822853 | 1.90E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene77220 | 0.813659 | 2.29E-51 | -1.69E-46 |
| MS.gene060167 | MS.gene77220 | 0.849725 | 2.69E-60 | -1.69E-46 |
| MS.gene060521 | MS.gene77220 | 0.80773 | 4.38E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene77220 | 0.820679 | 6.04E-53 | -1.69E-46 |
| MS.gene060634 | MS.gene77220 | -0.814025 | 1.90E-51 | -1.69E-46 |
| MS.gene060919 | MS.gene77220 | 0.802146 | 6.44E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77220.t1 | AT3G42170 | 24.535 | 269 | 190 | 4 | 4 | 272 | 279 | 534 | 1.37e-24 | 104 |
| MS.gene77220.t1 | AT3G42170 | 24.535 | 269 | 190 | 4 | 4 | 272 | 257 | 512 | 1.41e-24 | 103 |
Find 65 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATTCGTCATGCTGTTAAA+TGG | 0.226041 | 7.2:-37349030 | MS.gene77220:CDS |
| AATCAATAGCAAGATATTTA+AGG | 0.228288 | 7.2:+37348556 | None:intergenic |
| CTGACATCAATTTGTCCTTT+AGG | 0.231615 | 7.2:+37348447 | None:intergenic |
| TGGGACAATCACGTCCTAAA+TGG | 0.268359 | 7.2:-37349142 | MS.gene77220:CDS |
| AATTAAGTTCAATAAGTATT+GGG | 0.303044 | 7.2:-37348591 | MS.gene77220:CDS |
| TTAAACCTTATTGTGAAATC+TGG | 0.306371 | 7.2:-37349085 | MS.gene77220:CDS |
| TTCCGGTGCTTGCATATAAA+AGG | 0.308832 | 7.2:+37348480 | None:intergenic |
| TGCATAACATGATGGGTTCT+TGG | 0.314314 | 7.2:-37349162 | MS.gene77220:CDS |
| TGTGAACATAATCCCCATTT+AGG | 0.321864 | 7.2:+37349128 | None:intergenic |
| TCAAGCCAGATTTCACAATA+AGG | 0.329442 | 7.2:+37349080 | None:intergenic |
| AAATCCACAATTCGTTTGTC+TGG | 0.342991 | 7.2:-37348731 | MS.gene77220:CDS |
| TGACACTTATTTGAGGGATT+GGG | 0.351965 | 7.2:-37349254 | MS.gene77220:CDS |
| TTGACACTTATTTGAGGGAT+TGG | 0.369677 | 7.2:-37349255 | MS.gene77220:CDS |
| CAAATCCTCGCCATCTAGAT+TGG | 0.370694 | 7.2:-37349005 | MS.gene77220:CDS |
| TGTGACCAGTGCTTCGTATA+TGG | 0.396163 | 7.2:-37348699 | MS.gene77220:CDS |
| GGGACAATCACGTCCTAAAT+GGG | 0.402021 | 7.2:-37349141 | MS.gene77220:CDS |
| GCATAACATGATGGGTTCTT+GGG | 0.406939 | 7.2:-37349161 | MS.gene77220:CDS |
| ATGGAATAACAGATGAAGAT+TGG | 0.418977 | 7.2:-37348796 | MS.gene77220:CDS |
| GACACTTATTTGAGGGATTG+GGG | 0.420586 | 7.2:-37349253 | MS.gene77220:CDS |
| TATTGTGAAATCTGGCTTGA+AGG | 0.426745 | 7.2:-37349077 | MS.gene77220:CDS |
| TCGATATTTGCATAACATGA+TGG | 0.431257 | 7.2:-37349170 | MS.gene77220:CDS |
| GGTCACATTTCGTCGAGAAA+TGG | 0.442539 | 7.2:-37348834 | MS.gene77220:CDS |
| AAATTAAGTTCAATAAGTAT+TGG | 0.447605 | 7.2:-37348592 | MS.gene77220:CDS |
| GATTCGTCATGCTGTTAAAT+GGG | 0.454005 | 7.2:-37349029 | MS.gene77220:CDS |
| AAAGGCCTTTCTATACTTCA+AGG | 0.455082 | 7.2:+37348877 | None:intergenic |
| AGCAAGATATTTAAGGTGCC+TGG | 0.463597 | 7.2:+37348563 | None:intergenic |
| AATCATTACATCATTTGCCT+TGG | 0.464135 | 7.2:+37349192 | None:intergenic |
| TGGCAGAGGTGTTCACCATT+GGG | 0.469417 | 7.2:-37348679 | MS.gene77220:CDS |
| CGATATTTGCATAACATGAT+GGG | 0.471153 | 7.2:-37349169 | MS.gene77220:CDS |
| AATAAGTATTGGGGAGATCC+AGG | 0.471916 | 7.2:-37348581 | MS.gene77220:CDS |
| ATATGTTGACACTTATTTGA+GGG | 0.475799 | 7.2:-37349260 | MS.gene77220:CDS |
| ATGGCAGAGGTGTTCACCAT+TGG | 0.479243 | 7.2:-37348680 | MS.gene77220:CDS |
| AGTACAACAGCACCTTTGTA+TGG | 0.483326 | 7.2:+37348947 | None:intergenic |
| TGGAATAACAGATGAAGATT+GGG | 0.483610 | 7.2:-37348795 | MS.gene77220:CDS |
| CTCAATGTATTCAATGTTGA+CGG | 0.491868 | 7.2:-37348903 | MS.gene77220:CDS |
| AAGGGATCAACAAGCATATG+AGG | 0.497638 | 7.2:-37348655 | MS.gene77220:CDS |
| GTTGTATGGTAAGATATTAA+CGG | 0.503435 | 7.2:-37349230 | MS.gene77220:CDS |
| ATTAAGTTCAATAAGTATTG+GGG | 0.531652 | 7.2:-37348590 | MS.gene77220:CDS |
| AATATGTTGACACTTATTTG+AGG | 0.532577 | 7.2:-37349261 | MS.gene77220:CDS |
| GAGGTGTTCACCATTGGGAA+AGG | 0.533854 | 7.2:-37348674 | MS.gene77220:CDS |
| AGATCCAGACAAACGAATTG+TGG | 0.535242 | 7.2:+37348727 | None:intergenic |
| CTTGTTGATCCCTTTCCCAA+TGG | 0.550514 | 7.2:+37348664 | None:intergenic |
| AGGTGTTCACCATTGGGAAA+GGG | 0.555935 | 7.2:-37348673 | MS.gene77220:CDS |
| GCAAAATGCAGTTTCGCCCG+TGG | 0.559044 | 7.2:+37348518 | None:intergenic |
| ATCATGATGGGAGACATGTT+AGG | 0.559259 | 7.2:-37349286 | MS.gene77220:CDS |
| ATGGAAGAGAAAACAACGCA+TGG | 0.563172 | 7.2:-37348815 | MS.gene77220:CDS |
| TACTTGATGTTGACACTCGT+TGG | 0.565341 | 7.2:-37348928 | MS.gene77220:CDS |
| TTTATAAAACAACTCAAGCA+AGG | 0.566250 | 7.2:+37348751 | None:intergenic |
| CTCTGCCATATACGAAGCAC+TGG | 0.569623 | 7.2:+37348694 | None:intergenic |
| CAGTGCTTCGTATATGGCAG+AGG | 0.574586 | 7.2:-37348693 | MS.gene77220:CDS |
| ACACTTATTTGAGGGATTGG+GGG | 0.584183 | 7.2:-37349252 | MS.gene77220:CDS |
| GGTTGCCTTGAAGTATAGAA+AGG | 0.587124 | 7.2:-37348882 | MS.gene77220:CDS |
| TTCACGGGTCAAATCATGAT+GGG | 0.595410 | 7.2:-37349298 | None:intergenic |
| GAGTACAAATAAGTACATCA+TGG | 0.599583 | 7.2:-37348633 | MS.gene77220:CDS |
| TGTGAAATCTGGCTTGAAGG+AGG | 0.610118 | 7.2:-37349074 | MS.gene77220:CDS |
| TCGTACGCTTAACTTGTGAA+AGG | 0.630292 | 7.2:+37348859 | None:intergenic |
| TTATAAAACAACTCAAGCAA+GGG | 0.634094 | 7.2:+37348752 | None:intergenic |
| GATGAGAAAATTCCATACAA+AGG | 0.635607 | 7.2:-37348959 | MS.gene77220:CDS |
| TCACAAGTTAAGCGTACGAG+AGG | 0.647053 | 7.2:-37348855 | MS.gene77220:CDS |
| TAAGATATTAACGGTAACAG+TGG | 0.653045 | 7.2:-37349221 | MS.gene77220:CDS |
| GGACAATCACGTCCTAAATG+GGG | 0.660028 | 7.2:-37349140 | MS.gene77220:CDS |
| GGTAACAGTGGATAATGCCA+AGG | 0.660938 | 7.2:-37349209 | MS.gene77220:CDS |
| ATGGGGATTATGTTCACATG+CGG | 0.678091 | 7.2:-37349123 | MS.gene77220:CDS |
| GGCTTGAAGGAGGATAAACA+AGG | 0.683086 | 7.2:-37349064 | MS.gene77220:CDS |
| GCTTGAAGGAGGATAAACAA+GGG | 0.733936 | 7.2:-37349063 | MS.gene77220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAGTTCAATAAGTAT+TGG | - | chr7.2:37349088-37349107 | MS.gene77220:CDS | 15.0% |
| !! | AATTAAGTTCAATAAGTATT+GGG | - | chr7.2:37349089-37349108 | MS.gene77220:CDS | 15.0% |
| !!! | TTAGAAAAATTTGTTCAATA+TGG | - | chr7.2:37349259-37349278 | MS.gene77220:CDS | 15.0% |
| !! | AATCAATAGCAAGATATTTA+AGG | + | chr7.2:37349127-37349146 | None:intergenic | 20.0% |
| !!! | ATTAAGTTCAATAAGTATTG+GGG | - | chr7.2:37349090-37349109 | MS.gene77220:CDS | 20.0% |
| ! | AATATGTTGACACTTATTTG+AGG | - | chr7.2:37348419-37348438 | MS.gene77220:CDS | 25.0% |
| ! | ATATGTTGACACTTATTTGA+GGG | - | chr7.2:37348420-37348439 | MS.gene77220:CDS | 25.0% |
| ! | GTTGTATGGTAAGATATTAA+CGG | - | chr7.2:37348450-37348469 | MS.gene77220:CDS | 25.0% |
| ! | TTAAACCTTATTGTGAAATC+TGG | - | chr7.2:37348595-37348614 | MS.gene77220:CDS | 25.0% |
| ! | TTATAAAACAACTCAAGCAA+GGG | + | chr7.2:37348931-37348950 | None:intergenic | 25.0% |
| ! | TTTATAAAACAACTCAAGCA+AGG | + | chr7.2:37348932-37348951 | None:intergenic | 25.0% |
| !! | GAAAAATTTGTTCAATATGG+TGG | - | chr7.2:37349262-37349281 | MS.gene77220:CDS | 25.0% |
| AATCATTACATCATTTGCCT+TGG | + | chr7.2:37348491-37348510 | None:intergenic | 30.0% | |
| ATGGAATAACAGATGAAGAT+TGG | - | chr7.2:37348884-37348903 | MS.gene77220:CDS | 30.0% | |
| CGATATTTGCATAACATGAT+GGG | - | chr7.2:37348511-37348530 | MS.gene77220:CDS | 30.0% | |
| CTCAATGTATTCAATGTTGA+CGG | - | chr7.2:37348777-37348796 | MS.gene77220:CDS | 30.0% | |
| GAGTACAAATAAGTACATCA+TGG | - | chr7.2:37349047-37349066 | MS.gene77220:CDS | 30.0% | |
| GATGAGAAAATTCCATACAA+AGG | - | chr7.2:37348721-37348740 | MS.gene77220:CDS | 30.0% | |
| TAAGATATTAACGGTAACAG+TGG | - | chr7.2:37348459-37348478 | MS.gene77220:CDS | 30.0% | |
| TCGATATTTGCATAACATGA+TGG | - | chr7.2:37348510-37348529 | MS.gene77220:CDS | 30.0% | |
| TGGAATAACAGATGAAGATT+GGG | - | chr7.2:37348885-37348904 | MS.gene77220:CDS | 30.0% | |
| ! | ATGAACTTTTCCAATCTAGA+TGG | + | chr7.2:37348688-37348707 | None:intergenic | 30.0% |
| !!! | CTTTAGGTGTTTAGTTTTTC+CGG | + | chr7.2:37349220-37349239 | None:intergenic | 30.0% |
| AAAGGCCTTTCTATACTTCA+AGG | + | chr7.2:37348806-37348825 | None:intergenic | 35.0% | |
| AAATCCACAATTCGTTTGTC+TGG | - | chr7.2:37348949-37348968 | MS.gene77220:CDS | 35.0% | |
| AGATTCGTCATGCTGTTAAA+TGG | - | chr7.2:37348650-37348669 | MS.gene77220:CDS | 35.0% | |
| CGGAAAAACTAAACACCTAA+AGG | - | chr7.2:37349218-37349237 | MS.gene77220:CDS | 35.0% | |
| CTGACATCAATTTGTCCTTT+AGG | + | chr7.2:37349236-37349255 | None:intergenic | 35.0% | |
| GATTCGTCATGCTGTTAAAT+GGG | - | chr7.2:37348651-37348670 | MS.gene77220:CDS | 35.0% | |
| TCAAGCCAGATTTCACAATA+AGG | + | chr7.2:37348603-37348622 | None:intergenic | 35.0% | |
| TGACACTTATTTGAGGGATT+GGG | - | chr7.2:37348426-37348445 | MS.gene77220:CDS | 35.0% | |
| TGTGAACATAATCCCCATTT+AGG | + | chr7.2:37348555-37348574 | None:intergenic | 35.0% | |
| TTGACACTTATTTGAGGGAT+TGG | - | chr7.2:37348425-37348444 | MS.gene77220:CDS | 35.0% | |
| ! | TATTGTGAAATCTGGCTTGA+AGG | - | chr7.2:37348603-37348622 | MS.gene77220:CDS | 35.0% |
| !! | TTGCTTTTGTTCTTGATCCA+CGG | - | chr7.2:37349145-37349164 | MS.gene77220:CDS | 35.0% |
| AAGGGATCAACAAGCATATG+AGG | - | chr7.2:37349025-37349044 | MS.gene77220:CDS | 40.0% | |
| ACACTTATTTGAGGGATTGG+GGG | - | chr7.2:37348428-37348447 | MS.gene77220:CDS | 40.0% | |
| AGATCCAGACAAACGAATTG+TGG | + | chr7.2:37348956-37348975 | None:intergenic | 40.0% | |
| AGTACAACAGCACCTTTGTA+TGG | + | chr7.2:37348736-37348755 | None:intergenic | 40.0% | |
| ATGGAAGAGAAAACAACGCA+TGG | - | chr7.2:37348865-37348884 | MS.gene77220:CDS | 40.0% | |
| ATGGGGATTATGTTCACATG+CGG | - | chr7.2:37348557-37348576 | MS.gene77220:CDS | 40.0% | |
| GACACTTATTTGAGGGATTG+GGG | - | chr7.2:37348427-37348446 | MS.gene77220:CDS | 40.0% | |
| GCTTGAAGGAGGATAAACAA+GGG | - | chr7.2:37348617-37348636 | MS.gene77220:CDS | 40.0% | |
| GGTTGCCTTGAAGTATAGAA+AGG | - | chr7.2:37348798-37348817 | MS.gene77220:CDS | 40.0% | |
| TACTTGATGTTGACACTCGT+TGG | - | chr7.2:37348752-37348771 | MS.gene77220:CDS | 40.0% | |
| TTCCGGTGCTTGCATATAAA+AGG | + | chr7.2:37349203-37349222 | None:intergenic | 40.0% | |
| ! | AGCAAGATATTTAAGGTGCC+TGG | + | chr7.2:37349120-37349139 | None:intergenic | 40.0% |
| ! | GACCTTTTATATGCAAGCAC+CGG | - | chr7.2:37349198-37349217 | MS.gene77220:CDS | 40.0% |
| ! | TGCTTTTGTTCTTGATCCAC+GGG | - | chr7.2:37349146-37349165 | MS.gene77220:CDS | 40.0% |
| !! | AATAAGTATTGGGGAGATCC+AGG | - | chr7.2:37349099-37349118 | MS.gene77220:CDS | 40.0% |
| !! | GCATAACATGATGGGTTCTT+GGG | - | chr7.2:37348519-37348538 | MS.gene77220:CDS | 40.0% |
| !! | TCGTACGCTTAACTTGTGAA+AGG | + | chr7.2:37348824-37348843 | None:intergenic | 40.0% |
| !! | TGCATAACATGATGGGTTCT+TGG | - | chr7.2:37348518-37348537 | MS.gene77220:CDS | 40.0% |
| AGGTGTTCACCATTGGGAAA+GGG | - | chr7.2:37349007-37349026 | MS.gene77220:CDS | 45.0% | |
| CAAATCCTCGCCATCTAGAT+TGG | - | chr7.2:37348675-37348694 | MS.gene77220:CDS | 45.0% | |
| CTTGTTGATCCCTTTCCCAA+TGG | + | chr7.2:37349019-37349038 | None:intergenic | 45.0% | |
| GGACAATCACGTCCTAAATG+GGG | - | chr7.2:37348540-37348559 | MS.gene77220:CDS | 45.0% | |
| GGCTTGAAGGAGGATAAACA+AGG | - | chr7.2:37348616-37348635 | MS.gene77220:CDS | 45.0% | |
| GGGACAATCACGTCCTAAAT+GGG | - | chr7.2:37348539-37348558 | MS.gene77220:CDS | 45.0% | |
| GGTAACAGTGGATAATGCCA+AGG | - | chr7.2:37348471-37348490 | MS.gene77220:CDS | 45.0% | |
| GGTCACATTTCGTCGAGAAA+TGG | - | chr7.2:37348846-37348865 | MS.gene77220:CDS | 45.0% | |
| TCACAAGTTAAGCGTACGAG+AGG | - | chr7.2:37348825-37348844 | MS.gene77220:CDS | 45.0% | |
| TGGGACAATCACGTCCTAAA+TGG | - | chr7.2:37348538-37348557 | MS.gene77220:CDS | 45.0% | |
| TGTGACCAGTGCTTCGTATA+TGG | - | chr7.2:37348981-37349000 | MS.gene77220:CDS | 45.0% | |
| ! | CTTTTCCAATCTAGATGGCG+AGG | + | chr7.2:37348683-37348702 | None:intergenic | 45.0% |
| ! | TGTGAAATCTGGCTTGAAGG+AGG | - | chr7.2:37348606-37348625 | MS.gene77220:CDS | 45.0% |
| CAGTGCTTCGTATATGGCAG+AGG | - | chr7.2:37348987-37349006 | MS.gene77220:CDS | 50.0% | |
| CTCTGCCATATACGAAGCAC+TGG | + | chr7.2:37348989-37349008 | None:intergenic | 50.0% | |
| TTGAGGGATTGGGGGTTGTA+TGG | - | chr7.2:37348436-37348455 | MS.gene77220:CDS | 50.0% | |
| ! | GAGGTGTTCACCATTGGGAA+AGG | - | chr7.2:37349006-37349025 | MS.gene77220:CDS | 50.0% |
| !! | ATGGCAGAGGTGTTCACCAT+TGG | - | chr7.2:37349000-37349019 | MS.gene77220:CDS | 50.0% |
| !! | TGGCAGAGGTGTTCACCATT+GGG | - | chr7.2:37349001-37349020 | MS.gene77220:CDS | 50.0% |
| GCAAAATGCAGTTTCGCCCG+TGG | + | chr7.2:37349165-37349184 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 37348397 | 37349305 | 37348397 | ID=MS.gene77220 |
| chr7.2 | mRNA | 37348397 | 37349305 | 37348397 | ID=MS.gene77220.t1;Parent=MS.gene77220 |
| chr7.2 | exon | 37348397 | 37349305 | 37348397 | ID=MS.gene77220.t1.exon1;Parent=MS.gene77220.t1 |
| chr7.2 | CDS | 37348397 | 37349305 | 37348397 | ID=cds.MS.gene77220.t1;Parent=MS.gene77220.t1 |
| Gene Sequence |
| Protein sequence |
