Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77958.t1 | XP_003599235.1 | 98.6 | 365 | 3 | 1 | 1 | 365 | 1 | 363 | 1.60E-206 | 728.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77958.t1 | Q8L4Y5 | 79.7 | 365 | 72 | 2 | 1 | 365 | 1 | 363 | 1.7e-172 | 606.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77958.t1 | G7IWS3 | 98.6 | 365 | 3 | 1 | 1 | 365 | 1 | 363 | 1.2e-206 | 728.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77958.t1 | MTR_3g030550 | 98.630 | 365 | 3 | 1 | 1 | 365 | 1 | 363 | 0.0 | 746 |
| MS.gene77958.t1 | MTR_2g008050 | 37.203 | 379 | 216 | 8 | 1 | 365 | 7 | 377 | 6.79e-71 | 226 |
| MS.gene77958.t1 | MTR_7g026230 | 37.895 | 380 | 212 | 8 | 1 | 365 | 7 | 377 | 1.32e-70 | 225 |
| MS.gene77958.t1 | MTR_3g095530 | 36.842 | 380 | 216 | 8 | 1 | 365 | 7 | 377 | 1.24e-68 | 220 |
| MS.gene77958.t1 | MTR_7g093260 | 37.105 | 380 | 215 | 8 | 1 | 365 | 7 | 377 | 1.35e-68 | 220 |
| MS.gene77958.t1 | MTR_6g004000 | 37.234 | 376 | 212 | 8 | 5 | 365 | 11 | 377 | 1.53e-68 | 220 |
| MS.gene77958.t1 | MTR_0015s0130 | 37.105 | 380 | 215 | 8 | 1 | 365 | 7 | 377 | 1.99e-68 | 220 |
| MS.gene77958.t1 | MTR_2g096840 | 36.842 | 380 | 216 | 8 | 1 | 365 | 7 | 377 | 6.89e-68 | 218 |
| MS.gene77958.t1 | MTR_7g027185 | 27.835 | 388 | 244 | 9 | 3 | 362 | 6 | 385 | 2.14e-41 | 149 |
| MS.gene77958.t1 | MTR_7g027185 | 29.936 | 314 | 203 | 5 | 3 | 301 | 6 | 317 | 9.53e-41 | 147 |
| MS.gene77958.t1 | MTR_7g027185 | 29.677 | 310 | 201 | 5 | 3 | 297 | 6 | 313 | 1.68e-39 | 142 |
| MS.gene77958.t1 | MTR_5g066400 | 26.185 | 443 | 243 | 11 | 1 | 364 | 7 | 444 | 8.14e-37 | 138 |
| MS.gene77958.t1 | MTR_5g066400 | 25.282 | 443 | 219 | 12 | 1 | 364 | 7 | 416 | 6.55e-32 | 124 |
| MS.gene77958.t1 | MTR_8g464900 | 25.641 | 429 | 234 | 12 | 1 | 350 | 7 | 429 | 1.78e-30 | 120 |
| MS.gene77958.t1 | MTR_5g066400 | 25.263 | 380 | 206 | 9 | 1 | 303 | 7 | 385 | 1.68e-27 | 112 |
| MS.gene77958.t1 | MTR_8g007440 | 27.391 | 230 | 148 | 3 | 93 | 303 | 38 | 267 | 4.73e-25 | 103 |
| MS.gene77958.t1 | MTR_8g089630 | 25.728 | 412 | 248 | 13 | 3 | 359 | 9 | 417 | 6.58e-25 | 105 |
| MS.gene77958.t1 | MTR_2g445210 | 24.074 | 432 | 238 | 13 | 2 | 354 | 6 | 426 | 3.07e-20 | 92.0 |
| MS.gene77958.t1 | MTR_3g010170 | 26.241 | 282 | 180 | 11 | 92 | 355 | 193 | 464 | 5.93e-18 | 85.5 |
| MS.gene77958.t1 | MTR_8g070520 | 26.119 | 268 | 173 | 9 | 92 | 344 | 201 | 458 | 6.59e-17 | 82.0 |
| MS.gene77958.t1 | MTR_2g445210 | 22.581 | 372 | 211 | 9 | 2 | 298 | 6 | 375 | 1.35e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77958.t1 | AT3G60830 | 79.726 | 365 | 72 | 2 | 1 | 365 | 1 | 363 | 0.0 | 622 |
| MS.gene77958.t1 | AT3G12110 | 37.995 | 379 | 213 | 8 | 1 | 365 | 7 | 377 | 2.98e-69 | 222 |
| MS.gene77958.t1 | AT5G09810 | 36.842 | 380 | 216 | 8 | 1 | 365 | 7 | 377 | 1.15e-68 | 220 |
| MS.gene77958.t1 | AT1G49240 | 36.842 | 380 | 216 | 8 | 1 | 365 | 7 | 377 | 2.99e-68 | 219 |
| MS.gene77958.t1 | AT3G18780 | 36.842 | 380 | 216 | 8 | 1 | 365 | 7 | 377 | 3.09e-68 | 219 |
| MS.gene77958.t1 | AT3G18780 | 36.842 | 380 | 216 | 8 | 1 | 365 | 7 | 377 | 3.09e-68 | 219 |
| MS.gene77958.t1 | AT5G59370 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 5.17e-68 | 219 |
| MS.gene77958.t1 | AT5G59370 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 5.17e-68 | 219 |
| MS.gene77958.t1 | AT3G46520 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 5.17e-68 | 219 |
| MS.gene77958.t1 | AT3G46520 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 5.17e-68 | 219 |
| MS.gene77958.t1 | AT3G53750 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 7.06e-68 | 218 |
| MS.gene77958.t1 | AT3G53750 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 7.06e-68 | 218 |
| MS.gene77958.t1 | AT2G37620 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 7.06e-68 | 218 |
| MS.gene77958.t1 | AT2G37620 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 7.06e-68 | 218 |
| MS.gene77958.t1 | AT2G37620 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 7.06e-68 | 218 |
| MS.gene77958.t1 | AT2G37620 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 7.06e-68 | 218 |
| MS.gene77958.t1 | AT2G42170 | 39.550 | 311 | 177 | 6 | 58 | 365 | 27 | 329 | 5.78e-66 | 212 |
| MS.gene77958.t1 | AT2G42170 | 39.550 | 311 | 177 | 6 | 58 | 365 | 27 | 329 | 5.78e-66 | 212 |
| MS.gene77958.t1 | AT2G42100 | 36.870 | 377 | 216 | 10 | 3 | 365 | 10 | 378 | 3.60e-63 | 206 |
| MS.gene77958.t1 | AT2G42090 | 34.309 | 376 | 224 | 9 | 1 | 364 | 1 | 365 | 5.16e-62 | 203 |
| MS.gene77958.t1 | AT3G18780 | 35.311 | 354 | 205 | 8 | 1 | 339 | 7 | 351 | 7.11e-56 | 187 |
| MS.gene77958.t1 | AT2G42170 | 38.246 | 285 | 165 | 6 | 58 | 339 | 27 | 303 | 8.45e-54 | 180 |
| MS.gene77958.t1 | AT2G42170 | 38.246 | 285 | 165 | 6 | 58 | 339 | 27 | 303 | 8.45e-54 | 180 |
| MS.gene77958.t1 | AT2G42170 | 39.565 | 230 | 129 | 5 | 139 | 365 | 9 | 231 | 2.89e-44 | 152 |
| MS.gene77958.t1 | AT3G27000 | 27.621 | 391 | 241 | 11 | 3 | 362 | 6 | 385 | 2.44e-41 | 149 |
| MS.gene77958.t1 | AT1G18450 | 26.376 | 436 | 243 | 11 | 3 | 364 | 9 | 440 | 1.18e-36 | 138 |
| MS.gene77958.t1 | AT1G13180 | 23.923 | 418 | 248 | 12 | 3 | 359 | 8 | 416 | 1.66e-22 | 98.6 |
| MS.gene77958.t1 | AT5G56180 | 27.305 | 282 | 176 | 11 | 92 | 355 | 64 | 334 | 6.40e-20 | 90.1 |
| MS.gene77958.t1 | AT5G56180 | 27.305 | 282 | 176 | 11 | 92 | 355 | 196 | 466 | 1.13e-19 | 90.5 |
| MS.gene77958.t1 | AT5G56180 | 31.868 | 182 | 110 | 6 | 92 | 263 | 196 | 373 | 6.15e-16 | 79.0 |
Find 98 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCCTTCAGAAGCATTTC+CGG | 0.196619 | 3.2:+21146717 | None:intergenic |
| TTTGAAACGTTCAACATATC+AGG | 0.207624 | 3.2:-21150392 | MS.gene77958:CDS |
| TGATAATCATCGGCAACTTC+TGG | 0.284765 | 3.2:-21147965 | MS.gene77958:CDS |
| TTATTCCAGCCAAGTCTCTT+GGG | 0.329602 | 3.2:-21148045 | MS.gene77958:CDS |
| TTAACAGCACCCTCAATTAC+TGG | 0.348733 | 3.2:+21148856 | None:intergenic |
| CGGTGGTAAGAGGTTATGTT+AGG | 0.350541 | 3.2:-21151689 | MS.gene77958:CDS |
| TATGCTGTGGGAAGGATCTC+TGG | 0.352207 | 3.2:-21150335 | MS.gene77958:CDS |
| AGTGGACTTGGATGGGAAAT+TGG | 0.354267 | 3.2:-21151624 | MS.gene77958:CDS |
| TACTGATCTAACTAATTTCC+TGG | 0.365442 | 3.2:-21148800 | MS.gene77958:CDS |
| TGAAGGGCAAATATTGTTTA+CGG | 0.369134 | 3.2:-21151598 | MS.gene77958:CDS |
| GCCTCAAGAAGATTTGAGTT+TGG | 0.387231 | 3.2:-21148826 | MS.gene77958:CDS |
| AAGAGGTTATGTTAGGGATT+GGG | 0.396290 | 3.2:-21151682 | MS.gene77958:CDS |
| TAAGAGGTTATGTTAGGGAT+TGG | 0.397109 | 3.2:-21151683 | MS.gene77958:CDS |
| CTTGGGCAGGTGATAACAAT+TGG | 0.400113 | 3.2:-21148096 | MS.gene77958:intron |
| TTTATTCCAGCCAAGTCTCT+TGG | 0.416155 | 3.2:-21148046 | MS.gene77958:CDS |
| GTTGATGAAACAAATGATAA+TGG | 0.427372 | 3.2:-21151756 | MS.gene77958:CDS |
| TTGATCGGGAATTGCAAATC+CGG | 0.428499 | 3.2:+21151919 | None:intergenic |
| AAGGCAGACTACGACGAAAA+CGG | 0.431560 | 3.2:-21146755 | MS.gene77958:CDS |
| TGTTCGACCTACCTTGGTTA+AGG | 0.442095 | 3.2:-21147263 | MS.gene77958:intron |
| AATTTCCTGGCTCAAGAACT+TGG | 0.442992 | 3.2:-21148787 | MS.gene77958:CDS |
| AAAAGGCAGACCTGTCCATC+AGG | 0.453464 | 3.2:+21148631 | None:intergenic |
| CTGGAAAATACTGTAGTTTG+TGG | 0.463801 | 3.2:-21147946 | MS.gene77958:CDS |
| GGATGGGAAATTGGTAATGA+AGG | 0.464165 | 3.2:-21151615 | MS.gene77958:CDS |
| AATGATAATGGTAACGGTAA+TGG | 0.464208 | 3.2:-21151744 | MS.gene77958:CDS |
| AAATAATAATTTACCAGTCA+TGG | 0.466360 | 3.2:+21147912 | None:intergenic |
| GCTGATATTCACTAGTGGAT+TGG | 0.469625 | 3.2:+21148759 | None:intergenic |
| TACCATGGCGGGAGTTTGAT+CGG | 0.471339 | 3.2:+21151904 | None:intergenic |
| AGGCAGACTACGACGAAAAC+GGG | 0.473609 | 3.2:-21146754 | MS.gene77958:CDS |
| TCAAAATCAGCATGTAACTA+AGG | 0.477345 | 3.2:-21146774 | MS.gene77958:CDS |
| ATCTGCTGTTCGACCTACCT+TGG | 0.485020 | 3.2:-21147269 | MS.gene77958:CDS |
| ACCATGGCGGGAGTTTGATC+GGG | 0.485110 | 3.2:+21151905 | None:intergenic |
| GAATTGCAAATCCGGCTTTG+AGG | 0.489124 | 3.2:+21151927 | None:intergenic |
| ATTTGCCAAGTTCTTGAGCC+AGG | 0.496785 | 3.2:+21148782 | None:intergenic |
| GTCGATTACTGCGGCTTCCA+TGG | 0.498127 | 3.2:+21151964 | None:intergenic |
| AGATATTGCTCCAGTAATTG+AGG | 0.498422 | 3.2:-21148866 | MS.gene77958:CDS |
| TGTTAGGGATTGGGATGCAA+TGG | 0.505895 | 3.2:-21151673 | MS.gene77958:CDS |
| GGTTCCAGCCTCCTCAAAGC+CGG | 0.509745 | 3.2:-21151938 | MS.gene77958:CDS |
| GTCTCTAACCCCAAGAGACT+TGG | 0.509904 | 3.2:+21148036 | None:intergenic |
| ATTTAACCATGTATTCTGCA+TGG | 0.510134 | 3.2:-21146832 | MS.gene77958:CDS |
| GCGGTTGAGCCGGTGGTAAG+AGG | 0.511778 | 3.2:-21151699 | MS.gene77958:CDS |
| GGATGATGTCGCGGTTGAGC+CGG | 0.514729 | 3.2:-21151709 | MS.gene77958:CDS |
| GGCGGCACTTCTTCCATGAC+TGG | 0.515220 | 3.2:-21147925 | MS.gene77958:intron |
| TCAAGAAGATTTGAGTTTGG+AGG | 0.518524 | 3.2:-21148823 | MS.gene77958:CDS |
| AACCATGTATTCTGCATGGG+TGG | 0.523729 | 3.2:-21146828 | MS.gene77958:CDS |
| ACATACCCTTCCTGATGGAC+AGG | 0.524637 | 3.2:-21148641 | MS.gene77958:intron |
| TTTAACCATGTATTCTGCAT+GGG | 0.529048 | 3.2:-21146831 | MS.gene77958:CDS |
| TATTCCAGCCAAGTCTCTTG+GGG | 0.531624 | 3.2:-21148044 | MS.gene77958:CDS |
| CGGTAATGGTCAGTTGGTGG+TGG | 0.533767 | 3.2:-21151730 | MS.gene77958:CDS |
| TAGGGATTGGGATGCAATGG+AGG | 0.534942 | 3.2:-21151670 | MS.gene77958:CDS |
| TCCCACCCATGCAGAATACA+TGG | 0.542048 | 3.2:+21146826 | None:intergenic |
| TTGAAACGTTCAACATATCA+GGG | 0.546440 | 3.2:-21150391 | MS.gene77958:CDS |
| ACGGGCCTTCCATTGTTCAC+CGG | 0.552276 | 3.2:-21146736 | MS.gene77958:CDS |
| GATATTGCTCCAGTAATTGA+GGG | 0.556906 | 3.2:-21148865 | MS.gene77958:CDS |
| CATTTCCGGTGAACAATGGA+AGG | 0.561251 | 3.2:+21146731 | None:intergenic |
| GGTGGTAAGAGGTTATGTTA+GGG | 0.561762 | 3.2:-21151688 | MS.gene77958:CDS |
| TTCACCGGAAATGCTTCTGA+AGG | 0.563105 | 3.2:-21146721 | None:intergenic |
| AAATCCGGCTTTGAGGAGGC+TGG | 0.564191 | 3.2:+21151934 | None:intergenic |
| ACCATGTATTCTGCATGGGT+GGG | 0.564824 | 3.2:-21146827 | MS.gene77958:CDS |
| CTAACCCCAAGAGACTTGGC+TGG | 0.564883 | 3.2:+21148040 | None:intergenic |
| AATACCTTTGGGGTACAAAG+TGG | 0.572233 | 3.2:+21151573 | None:intergenic |
| GAAGCATTTCCGGTGAACAA+TGG | 0.576275 | 3.2:+21146727 | None:intergenic |
| ACTAAAATCAAATACCTTTG+GGG | 0.581864 | 3.2:+21151563 | None:intergenic |
| ATGTCACGGTTGAAATAGTA+CGG | 0.582136 | 3.2:+21147989 | None:intergenic |
| CTCTTGGGGTTAGAGACTCA+TGG | 0.582241 | 3.2:-21148030 | MS.gene77958:CDS |
| CCGTGACATCTGATAATCAT+CGG | 0.585129 | 3.2:-21147975 | MS.gene77958:CDS |
| GGAAGAGAAAGATATACAGT+TGG | 0.586903 | 3.2:-21148075 | MS.gene77958:CDS |
| GACAGAAAACTCTTGTCCTG+TGG | 0.587399 | 3.2:-21148668 | MS.gene77958:CDS |
| TTTGTACAGTGGACTTGGAT+GGG | 0.590015 | 3.2:-21151631 | MS.gene77958:CDS |
| GAGACACATACCCTTCCTGA+TGG | 0.590973 | 3.2:-21148646 | MS.gene77958:CDS |
| GGCAGACCTGTCCATCAGGA+AGG | 0.597367 | 3.2:+21148635 | None:intergenic |
| CCGATGATTATCAGATGTCA+CGG | 0.598353 | 3.2:+21147975 | None:intergenic |
| TTGCAAATCCGGCTTTGAGG+AGG | 0.598400 | 3.2:+21151930 | None:intergenic |
| TAACGGTAATGGTCAGTTGG+TGG | 0.598753 | 3.2:-21151733 | MS.gene77958:CDS |
| TATCACTCTATGCTGTGGGA+AGG | 0.598809 | 3.2:-21150343 | MS.gene77958:CDS |
| TCTGGATGCACAGTTGACAT+TGG | 0.600543 | 3.2:-21150317 | MS.gene77958:CDS |
| GAAACAAATGATAATGGTAA+CGG | 0.601469 | 3.2:-21151750 | MS.gene77958:CDS |
| GATGGGAAATTGGTAATGAA+GGG | 0.602783 | 3.2:-21151614 | MS.gene77958:CDS |
| TGCACAGTTGACATTGGTCA+TGG | 0.603154 | 3.2:-21150311 | MS.gene77958:CDS |
| CAAATTACCTTAACCAAGGT+AGG | 0.604467 | 3.2:+21147256 | None:intergenic |
| TGGTAACGGTAATGGTCAGT+TGG | 0.605363 | 3.2:-21151736 | MS.gene77958:CDS |
| CAAATCTTCTTGAGGCAATG+TGG | 0.606494 | 3.2:+21148833 | None:intergenic |
| GGAAGGGTATGTGTCTCCAC+AGG | 0.609074 | 3.2:+21148652 | None:intergenic |
| TCCAAACTCAAATCTTCTTG+AGG | 0.609668 | 3.2:+21148825 | None:intergenic |
| TCCCGATCAAACTCCCGCCA+TGG | 0.609858 | 3.2:-21151906 | MS.gene77958:intron |
| TGATGTCGCGGTTGAGCCGG+TGG | 0.615607 | 3.2:-21151706 | MS.gene77958:CDS |
| TCCTAGTCAGATGAAACGAA+TGG | 0.618467 | 3.2:-21151778 | MS.gene77958:CDS |
| CTAACATAACCTCTTACCAC+CGG | 0.621740 | 3.2:+21151690 | None:intergenic |
| GACATGCTGATATTCACTAG+TGG | 0.627981 | 3.2:+21148754 | None:intergenic |
| ATGTATTCTGCATGGGTGGG+AGG | 0.631210 | 3.2:-21146824 | MS.gene77958:CDS |
| TGATAAAACTGCCTGTTCCG+AGG | 0.631931 | 3.2:+21150361 | None:intergenic |
| ACCATTCGTTTCATCTGACT+AGG | 0.632362 | 3.2:+21151777 | None:intergenic |
| GGATCCACTTTGTACCCCAA+AGG | 0.635293 | 3.2:-21151577 | MS.gene77958:intron |
| GCAGACCTGTCCATCAGGAA+GGG | 0.640745 | 3.2:+21148636 | None:intergenic |
| GAAAATACTGTAGTTTGTGG+CGG | 0.660031 | 3.2:-21147943 | MS.gene77958:CDS |
| GTTGGTGGTGGATGATGTCG+CGG | 0.669252 | 3.2:-21151718 | MS.gene77958:CDS |
| CGAACAAATTACCTTAACCA+AGG | 0.677009 | 3.2:+21147252 | None:intergenic |
| GAAGCCGCAGTAATCGACGC+TGG | 0.683303 | 3.2:-21151959 | MS.gene77958:CDS |
| GGAACCAGCGTCGATTACTG+CGG | 0.715989 | 3.2:+21151955 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTAAATACAAAAAAGA+AGG | + | chr3.2:21150802-21150821 | None:intergenic | 10.0% |
| !! | TTTAAATTATATGTAATCTA+CGG | + | chr3.2:21148684-21148703 | None:intergenic | 10.0% |
| !!! | CAATTTTTTCAAATTATTAT+CGG | + | chr3.2:21147314-21147333 | None:intergenic | 10.0% |
| !!! | TATTTATATTTAGTTTCATA+TGG | - | chr3.2:21151183-21151202 | MS.gene77958:intron | 10.0% |
| !! | AAATGATATCAAAATTATCT+AGG | + | chr3.2:21148040-21148059 | None:intergenic | 15.0% |
| !! | AATATTATAAGATTGAACAA+TGG | + | chr3.2:21151635-21151654 | None:intergenic | 15.0% |
| !! | ACATACTAATAATTACAATT+GGG | - | chr3.2:21149658-21149677 | MS.gene77958:intron | 15.0% |
| !! | ATATTTCAATATTTATAGAC+AGG | + | chr3.2:21147805-21147824 | None:intergenic | 15.0% |
| !! | ATTAAATTGAAGATTACTTA+TGG | - | chr3.2:21150310-21150329 | MS.gene77958:CDS | 15.0% |
| !! | GTTAATGTAATTGAATTAAA+TGG | - | chr3.2:21148619-21148638 | MS.gene77958:intron | 15.0% |
| !! | TACATACTAATAATTACAAT+TGG | - | chr3.2:21149657-21149676 | MS.gene77958:intron | 15.0% |
| !! | TATATGGAAGTAATTTAATA+TGG | - | chr3.2:21150352-21150371 | MS.gene77958:CDS | 15.0% |
| !! | TTTATGAATAAGTATTTAAG+TGG | - | chr3.2:21148450-21148469 | MS.gene77958:intron | 15.0% |
| !!! | AAATCTATTTCTTCTTTATA+TGG | - | chr3.2:21150336-21150355 | MS.gene77958:CDS | 15.0% |
| !!! | AACAATTGATATTTTTGAAA+TGG | - | chr3.2:21148907-21148926 | MS.gene77958:intron | 15.0% |
| !!! | AATACATATTTTTTGTTTCA+TGG | - | chr3.2:21149352-21149371 | MS.gene77958:intron | 15.0% |
| !!! | GCATTTAAATTTTTACAAAA+TGG | - | chr3.2:21150844-21150863 | MS.gene77958:intron | 15.0% |
| !!! | TATTTATATTACTTTTTTCC+AGG | - | chr3.2:21148242-21148261 | MS.gene77958:intron | 15.0% |
| !!! | TTAATTTAGTGTTTTTGAAA+GGG | - | chr3.2:21147171-21147190 | MS.gene77958:intron | 15.0% |
| !!! | TTATTGGTTATGATTTATTA+TGG | - | chr3.2:21150088-21150107 | MS.gene77958:intron | 15.0% |
| !!! | TTTAATTTAGTGTTTTTGAA+AGG | - | chr3.2:21147170-21147189 | MS.gene77958:intron | 15.0% |
| !!! | TTTTAAATTGCTATATGATA+TGG | - | chr3.2:21150904-21150923 | MS.gene77958:intron | 15.0% |
| !!! | TTTTCCTTGAAAATTAAATT+GGG | - | chr3.2:21148140-21148159 | MS.gene77958:intron | 15.0% |
| !!! | TTTTTCCTTGAAAATTAAAT+TGG | - | chr3.2:21148139-21148158 | MS.gene77958:intron | 15.0% |
| !! | AAAATGCAGAAATAAAACAA+TGG | + | chr3.2:21151329-21151348 | None:intergenic | 20.0% |
| !! | AAATAATAATTTACCAGTCA+TGG | + | chr3.2:21150777-21150796 | None:intergenic | 20.0% |
| !! | AATGAAAATTGAGAATTGAA+AGG | + | chr3.2:21146817-21146836 | None:intergenic | 20.0% |
| !! | AGAATATACAAGAGATAAAT+GGG | - | chr3.2:21149402-21149421 | MS.gene77958:intron | 20.0% |
| !! | ATAACTAATATGATAAGAGT+TGG | - | chr3.2:21148577-21148596 | MS.gene77958:intron | 20.0% |
| !! | ATGAAAATTGAGAATTGAAA+GGG | + | chr3.2:21146816-21146835 | None:intergenic | 20.0% |
| !! | TACTAAAATCAAATACCTTT+GGG | + | chr3.2:21147127-21147146 | None:intergenic | 20.0% |
| !! | TCTCAGTTAATATAAGTTAA+TGG | - | chr3.2:21151494-21151513 | MS.gene77958:intron | 20.0% |
| !! | TGTTACATATGTAATTAACT+TGG | - | chr3.2:21148857-21148876 | MS.gene77958:CDS | 20.0% |
| !! | TTTCCTTGAAAATTAAATTG+GGG | - | chr3.2:21148141-21148160 | MS.gene77958:intron | 20.0% |
| !!! | ACAATTTTTGTAGTAGTTTA+TGG | - | chr3.2:21151543-21151562 | MS.gene77958:intron | 20.0% |
| !!! | GAAATTTTAAATCATAGCAA+TGG | + | chr3.2:21149249-21149268 | None:intergenic | 20.0% |
| !!! | TATCTATATTTGAAGCAATA+GGG | - | chr3.2:21148407-21148426 | MS.gene77958:intron | 20.0% |
| !!! | TATGATTTAAAATTTCCACA+TGG | - | chr3.2:21149253-21149272 | MS.gene77958:intron | 20.0% |
| !!! | TTTAGTTCATAAAGATTTGA+CGG | - | chr3.2:21150396-21150415 | MS.gene77958:CDS | 20.0% |
| !!! | TTTAGTTTCATATGGAATTT+AGG | - | chr3.2:21151191-21151210 | MS.gene77958:intron | 20.0% |
| !!! | TTTTGATGTTTTTGTTTTGT+GGG | - | chr3.2:21146875-21146894 | MS.gene77958:intron | 20.0% |
| !!! | TTTTTGATGTTTTTGTTTTG+TGG | - | chr3.2:21146874-21146893 | MS.gene77958:intron | 20.0% |
| ! | AAAAACTACTTTAGCAAGTA+TGG | + | chr3.2:21151890-21151909 | None:intergenic | 25.0% |
| ! | ACTAAAATCAAATACCTTTG+GGG | + | chr3.2:21147126-21147145 | None:intergenic | 25.0% |
| ! | AGAAGTAACATGATTATGTT+CGG | + | chr3.2:21147777-21147796 | None:intergenic | 25.0% |
| ! | AGGATCATCATAATAAAGTA+TGG | + | chr3.2:21148020-21148039 | None:intergenic | 25.0% |
| ! | ATAATAAAGTATGGTAACCA+AGG | + | chr3.2:21148011-21148030 | None:intergenic | 25.0% |
| ! | ATAATCGTGAAAATTAACAC+TGG | - | chr3.2:21150184-21150203 | MS.gene77958:intron | 25.0% |
| ! | ATGTTTATGTCTACTGTTTA+TGG | - | chr3.2:21148083-21148102 | MS.gene77958:CDS | 25.0% |
| ! | ATTTAATGTCTGCTATGATA+TGG | + | chr3.2:21147476-21147495 | None:intergenic | 25.0% |
| ! | ATTTACTACCTTGTGAATTT+CGG | + | chr3.2:21149036-21149055 | None:intergenic | 25.0% |
| ! | CAGAATATACAAGAGATAAA+TGG | - | chr3.2:21149401-21149420 | MS.gene77958:intron | 25.0% |
| ! | CCAATAAAAGATGAATCAAA+AGG | + | chr3.2:21150075-21150094 | None:intergenic | 25.0% |
| ! | CTACTAAAATCAAATACCTT+TGG | + | chr3.2:21147128-21147147 | None:intergenic | 25.0% |
| ! | CTGTGTAACTTTATCTTATT+TGG | - | chr3.2:21149786-21149805 | MS.gene77958:intron | 25.0% |
| ! | TACATGAAATCAATAACCTA+CGG | + | chr3.2:21150512-21150531 | None:intergenic | 25.0% |
| ! | TATGTCTCATAATAGACATT+CGG | + | chr3.2:21149617-21149636 | None:intergenic | 25.0% |
| ! | TGAAAATTGAGAATTGAAAG+GGG | + | chr3.2:21146815-21146834 | None:intergenic | 25.0% |
| ! | TGTCATATGCTTCAAATTTA+AGG | - | chr3.2:21147681-21147700 | MS.gene77958:intron | 25.0% |
| ! | TGTTTATGTCTACTGTTTAT+GGG | - | chr3.2:21148084-21148103 | MS.gene77958:CDS | 25.0% |
| ! | TTAGTTCATAAAGATTTGAC+GGG | - | chr3.2:21150397-21150416 | MS.gene77958:CDS | 25.0% |
| ! | TTCCTTGAAAATTAAATTGG+GGG | - | chr3.2:21148142-21148161 | MS.gene77958:intron | 25.0% |
| ! | TTTGTTTGATTAATTTCCGT+AGG | - | chr3.2:21150493-21150512 | MS.gene77958:intron | 25.0% |
| !! | AAAAGTTAGTGTTATTGTTG+TGG | - | chr3.2:21148931-21148950 | MS.gene77958:intron | 25.0% |
| !! | AATTGGGCGTAATTTAATTT+GGG | - | chr3.2:21149674-21149693 | MS.gene77958:intron | 25.0% |
| !! | GAATACATGGTTAAATTTTC+AGG | + | chr3.2:21151850-21151869 | None:intergenic | 25.0% |
| !! | GTATCTATATTTGAAGCAAT+AGG | - | chr3.2:21148406-21148425 | MS.gene77958:intron | 25.0% |
| !! | GTTGATGAAACAAATGATAA+TGG | - | chr3.2:21146930-21146949 | MS.gene77958:intron | 25.0% |
| !! | TATACTGATATCTAAAGTTG+AGG | + | chr3.2:21148710-21148729 | None:intergenic | 25.0% |
| !! | TGCTTTGATGAGATTATTTT+GGG | - | chr3.2:21147652-21147671 | MS.gene77958:intron | 25.0% |
| !! | TTGAATTATGTTTTGTACAG+TGG | - | chr3.2:21147044-21147063 | MS.gene77958:intron | 25.0% |
| !! | TTTGTGTATGTTTTCTTCTT+AGG | - | chr3.2:21148059-21148078 | MS.gene77958:CDS | 25.0% |
| !!! | AAATTTTCAGGCATATATTC+TGG | + | chr3.2:21151838-21151857 | None:intergenic | 25.0% |
| !!! | AGTTAATGGTTTTTTCACTT+AGG | - | chr3.2:21151508-21151527 | MS.gene77958:intron | 25.0% |
| !!! | CCTTTTGATTCATCTTTTAT+TGG | - | chr3.2:21150072-21150091 | MS.gene77958:intron | 25.0% |
| !!! | CTGAAATGTTACATTTTGAT+AGG | + | chr3.2:21150969-21150988 | None:intergenic | 25.0% |
| !!! | GAAACAAATGATAATGGTAA+CGG | - | chr3.2:21146936-21146955 | MS.gene77958:intron | 25.0% |
| !!! | TCAAGTTGGAAATAGTTTAA+AGG | - | chr3.2:21149131-21149150 | MS.gene77958:intron | 25.0% |
| !!! | TGACATTTTCTAGGATTAAA+CGG | - | chr3.2:21149073-21149092 | MS.gene77958:intron | 25.0% |
| AACCAAATGTAACCTTATCA+TGG | + | chr3.2:21150942-21150961 | None:intergenic | 30.0% | |
| ACATATACATGTCTAATAGG+CGG | - | chr3.2:21149707-21149726 | MS.gene77958:intron | 30.0% | |
| AGTACTCAGTTGAATAAAGT+TGG | + | chr3.2:21147908-21147927 | None:intergenic | 30.0% | |
| ATAAAGTTACACAGAACAAC+AGG | + | chr3.2:21149780-21149799 | None:intergenic | 30.0% | |
| ATTTAACCATGTATTCTGCA+TGG | - | chr3.2:21151854-21151873 | MS.gene77958:intron | 30.0% | |
| ATTTGATCAATAGCATCACT+TGG | + | chr3.2:21151131-21151150 | None:intergenic | 30.0% | |
| CAAAGAAAATCACATGTATC+AGG | + | chr3.2:21150477-21150496 | None:intergenic | 30.0% | |
| CAATTGGGCGTAATTTAATT+TGG | - | chr3.2:21149673-21149692 | MS.gene77958:intron | 30.0% | |
| CATTACGATGTAGAATGATA+AGG | + | chr3.2:21148979-21148998 | None:intergenic | 30.0% | |
| CTGACATATACATGTCTAAT+AGG | - | chr3.2:21149704-21149723 | MS.gene77958:intron | 30.0% | |
| GAAAATTGAGAATTGAAAGG+GGG | + | chr3.2:21146814-21146833 | None:intergenic | 30.0% | |
| GAATATGCAATTGCAAACAT+GGG | + | chr3.2:21148516-21148535 | None:intergenic | 30.0% | |
| GAATTTCGGGGATATAATAT+TGG | + | chr3.2:21149022-21149041 | None:intergenic | 30.0% | |
| GATGCATTAAAACCATGTTT+GGG | + | chr3.2:21147946-21147965 | None:intergenic | 30.0% | |
| GGCAAATAAAAATGAAAGAC+AGG | - | chr3.2:21150221-21150240 | MS.gene77958:intron | 30.0% | |
| GTATGTTCATGATAAGATGA+AGG | - | chr3.2:21151268-21151287 | MS.gene77958:intron | 30.0% | |
| GTCACAAATGAATATTAGAG+AGG | - | chr3.2:21149164-21149183 | MS.gene77958:intron | 30.0% | |
| TAAAACCATGTTTGGGTAAA+AGG | + | chr3.2:21147939-21147958 | None:intergenic | 30.0% | |
| TACTGATCTAACTAATTTCC+TGG | - | chr3.2:21149886-21149905 | MS.gene77958:intron | 30.0% | |
| TATTATACGTCTAGATGTGT+TGG | - | chr3.2:21150268-21150287 | MS.gene77958:intron | 30.0% | |
| TCAAAATCAGCATGTAACTA+AGG | - | chr3.2:21151912-21151931 | MS.gene77958:CDS | 30.0% | |
| TGAAGGGCAAATATTGTTTA+CGG | - | chr3.2:21147088-21147107 | MS.gene77958:intron | 30.0% | |
| TGATGCATTAAAACCATGTT+TGG | + | chr3.2:21147947-21147966 | None:intergenic | 30.0% | |
| TGCAAAAAACCAGAGATTAT+TGG | + | chr3.2:21151811-21151830 | None:intergenic | 30.0% | |
| TGCAAACATGGGATAATTTA+TGG | + | chr3.2:21148505-21148524 | None:intergenic | 30.0% | |
| TGTTGGAGAGATTATCATTT+AGG | - | chr3.2:21150285-21150304 | MS.gene77958:intron | 30.0% | |
| TTATGATCATAGAGATGATC+TGG | - | chr3.2:21150541-21150560 | MS.gene77958:intron | 30.0% | |
| TTGAAACGTTCAACATATCA+GGG | - | chr3.2:21148295-21148314 | MS.gene77958:intron | 30.0% | |
| TTTAACCATGTATTCTGCAT+GGG | - | chr3.2:21151855-21151874 | MS.gene77958:intron | 30.0% | |
| TTTACTACCTTGTGAATTTC+GGG | + | chr3.2:21149035-21149054 | None:intergenic | 30.0% | |
| ! | ACAATTTTCTGCTGTATATG+TGG | - | chr3.2:21150871-21150890 | MS.gene77958:intron | 30.0% |
| ! | CTGCTTTGATGAGATTATTT+TGG | - | chr3.2:21147651-21147670 | MS.gene77958:intron | 30.0% |
| ! | GATTTAAAATTTCCACATGG+TGG | - | chr3.2:21149256-21149275 | MS.gene77958:intron | 30.0% |
| ! | TTAGTGTTATTGTTGTGGAT+GGG | - | chr3.2:21148936-21148955 | MS.gene77958:intron | 30.0% |
| ! | TTTGAAACGTTCAACATATC+AGG | - | chr3.2:21148294-21148313 | MS.gene77958:intron | 30.0% |
| !! | AATGATAATGGTAACGGTAA+TGG | - | chr3.2:21146942-21146961 | MS.gene77958:intron | 30.0% |
| !! | TTTTGAAGAGAGATTTCAGA+AGG | - | chr3.2:21151378-21151397 | MS.gene77958:intron | 30.0% |
| !!! | AACATGGTTTTAATGCATCA+TGG | - | chr3.2:21147947-21147966 | MS.gene77958:CDS | 30.0% |
| !!! | ACATGGTTTTAATGCATCAT+GGG | - | chr3.2:21147948-21147967 | MS.gene77958:CDS | 30.0% |
| !!! | TTAGTTACATGCTGATTTTG+AGG | + | chr3.2:21151913-21151932 | None:intergenic | 30.0% |
| AAATAAACCGCTATTGCTCT+GGG | - | chr3.2:21147492-21147511 | MS.gene77958:intron | 35.0% | |
| AACCGATCAAACATAAAGTC+GGG | + | chr3.2:21150134-21150153 | None:intergenic | 35.0% | |
| AACGGCATTAATTCGCTATA+TGG | - | chr3.2:21149091-21149110 | MS.gene77958:intron | 35.0% | |
| AAGAGATAAATGGGAATACG+AGG | - | chr3.2:21149411-21149430 | MS.gene77958:intron | 35.0% | |
| AAGAGGTTATGTTAGGGATT+GGG | - | chr3.2:21147004-21147023 | MS.gene77958:intron | 35.0% | |
| AATCATGCACAGAGAAATAC+AGG | + | chr3.2:21151754-21151773 | None:intergenic | 35.0% | |
| AATCTACGGATATAGATCCA+TGG | + | chr3.2:21148670-21148689 | None:intergenic | 35.0% | |
| ACAATGGCATACTCATAAAG+AGG | + | chr3.2:21151313-21151332 | None:intergenic | 35.0% | |
| ACAATTAGAGACACACATTG+CGG | + | chr3.2:21146849-21146868 | None:intergenic | 35.0% | |
| ACATGATTATGTTCGGAAGA+TGG | + | chr3.2:21147770-21147789 | None:intergenic | 35.0% | |
| ACATGTCTCCAAGACATTAT+AGG | - | chr3.2:21151722-21151741 | MS.gene77958:CDS | 35.0% | |
| ACTTATTAAACACACGAGTC+TGG | - | chr3.2:21147734-21147753 | MS.gene77958:intron | 35.0% | |
| AGACCTTTGACTAACTTTCT+TGG | - | chr3.2:21150572-21150591 | MS.gene77958:intron | 35.0% | |
| AGAGATAAATGGGAATACGA+GGG | - | chr3.2:21149412-21149431 | MS.gene77958:intron | 35.0% | |
| AGATATTGCTCCAGTAATTG+AGG | - | chr3.2:21149820-21149839 | MS.gene77958:intron | 35.0% | |
| AGCCATGATAAGGTTACATT+TGG | - | chr3.2:21150937-21150956 | MS.gene77958:intron | 35.0% | |
| ATAAAGTATGGTAACCAAGG+AGG | + | chr3.2:21148008-21148027 | None:intergenic | 35.0% | |
| ATAGACATTCGGTTGTCATT+TGG | + | chr3.2:21149606-21149625 | None:intergenic | 35.0% | |
| ATCTACGGATATAGATCCAT+GGG | + | chr3.2:21148669-21148688 | None:intergenic | 35.0% | |
| ATGCTATTGCCAATAATCTC+TGG | - | chr3.2:21151799-21151818 | MS.gene77958:intron | 35.0% | |
| ATGTCACGGTTGAAATAGTA+CGG | + | chr3.2:21150700-21150719 | None:intergenic | 35.0% | |
| CAAATTACCTTAACCAAGGT+AGG | + | chr3.2:21151433-21151452 | None:intergenic | 35.0% | |
| CCTAGAAAATGTCATATTCG+AGG | + | chr3.2:21149067-21149086 | None:intergenic | 35.0% | |
| CGAACAAATTACCTTAACCA+AGG | + | chr3.2:21151437-21151456 | None:intergenic | 35.0% | |
| CTCAAAGAAAAACAGGAAGA+TGG | - | chr3.2:21148882-21148901 | MS.gene77958:intron | 35.0% | |
| CTGAATATTGAGCCATGATA+AGG | - | chr3.2:21150927-21150946 | MS.gene77958:intron | 35.0% | |
| CTGGAAAATACTGTAGTTTG+TGG | - | chr3.2:21150740-21150759 | MS.gene77958:intron | 35.0% | |
| GAACCGATCAAACATAAAGT+CGG | + | chr3.2:21150135-21150154 | None:intergenic | 35.0% | |
| GACATTGGTCATGGAAAAAT+AGG | - | chr3.2:21148384-21148403 | MS.gene77958:intron | 35.0% | |
| GACCTTTGACTAACTTTCTT+GGG | - | chr3.2:21150573-21150592 | MS.gene77958:intron | 35.0% | |
| GATATTGCTCCAGTAATTGA+GGG | - | chr3.2:21149821-21149840 | MS.gene77958:intron | 35.0% | |
| GCATTAATTCGCTATATGGT+TGG | - | chr3.2:21149095-21149114 | MS.gene77958:intron | 35.0% | |
| GGAAGAGAAAGATATACAGT+TGG | - | chr3.2:21150611-21150630 | MS.gene77958:intron | 35.0% | |
| GGAATATGCAATTGCAAACA+TGG | + | chr3.2:21148517-21148536 | None:intergenic | 35.0% | |
| TAAATAAACCGCTATTGCTC+TGG | - | chr3.2:21147491-21147510 | MS.gene77958:intron | 35.0% | |
| TAAGAGGTTATGTTAGGGAT+TGG | - | chr3.2:21147003-21147022 | MS.gene77958:intron | 35.0% | |
| TACGATGTAGAATGATAAGG+AGG | + | chr3.2:21148976-21148995 | None:intergenic | 35.0% | |
| TAGAATGATAAGGAGGTTGA+GGG | + | chr3.2:21148969-21148988 | None:intergenic | 35.0% | |
| TATTAGAAGGTGGAATGTTG+TGG | - | chr3.2:21151025-21151044 | MS.gene77958:intron | 35.0% | |
| TATTATACCATTTGCCTCCT+TGG | - | chr3.2:21147991-21148010 | MS.gene77958:CDS | 35.0% | |
| TCAATTACTGGAGCAATATC+TGG | + | chr3.2:21149821-21149840 | None:intergenic | 35.0% | |
| TCCAAACTCAAATCTTCTTG+AGG | + | chr3.2:21149864-21149883 | None:intergenic | 35.0% | |
| TCTAACAGTCACAAGATAGA+AGG | + | chr3.2:21151471-21151490 | None:intergenic | 35.0% | |
| TGGCACTTTCTAAACTTGAA+TGG | + | chr3.2:21149229-21149248 | None:intergenic | 35.0% | |
| TGTGGTTATAACATCCAACA+GGG | - | chr3.2:21149466-21149485 | MS.gene77958:intron | 35.0% | |
| TTACTACCTTGTGAATTTCG+GGG | + | chr3.2:21149034-21149053 | None:intergenic | 35.0% | |
| TTATATCCCCGAAATTCACA+AGG | - | chr3.2:21149025-21149044 | MS.gene77958:intron | 35.0% | |
| TTCCCGACTTTATGTTTGAT+CGG | - | chr3.2:21150129-21150148 | MS.gene77958:intron | 35.0% | |
| TTTCACGATTATCAGATTCG+AGG | + | chr3.2:21150176-21150195 | None:intergenic | 35.0% | |
| ! | ATTAACACTGGTTACTGAAG+AGG | - | chr3.2:21150196-21150215 | MS.gene77958:intron | 35.0% |
| ! | CCTCGAATATGACATTTTCT+AGG | - | chr3.2:21149064-21149083 | MS.gene77958:intron | 35.0% |
| ! | GAAAATACTGTAGTTTGTGG+CGG | - | chr3.2:21150743-21150762 | MS.gene77958:intron | 35.0% |
| ! | GTTAGTGTTATTGTTGTGGA+TGG | - | chr3.2:21148935-21148954 | MS.gene77958:intron | 35.0% |
| ! | GTTTTATCACTCTATGCTGT+GGG | - | chr3.2:21148339-21148358 | MS.gene77958:intron | 35.0% |
| ! | TAGTGTTATTGTTGTGGATG+GGG | - | chr3.2:21148937-21148956 | MS.gene77958:intron | 35.0% |
| ! | TCAAGAAGATTTGAGTTTGG+AGG | - | chr3.2:21149863-21149882 | MS.gene77958:intron | 35.0% |
| ! | TCTAAAATAACCACTCCTCT+AGG | - | chr3.2:21149549-21149568 | MS.gene77958:intron | 35.0% |
| ! | TGTTTATGGGTTATCCAACT+AGG | - | chr3.2:21148097-21148116 | MS.gene77958:intron | 35.0% |
| ! | TTAACACTGGTTACTGAAGA+GGG | - | chr3.2:21150197-21150216 | MS.gene77958:intron | 35.0% |
| ! | TTACACCTTTTACCCAAACA+TGG | - | chr3.2:21147931-21147950 | MS.gene77958:CDS | 35.0% |
| !! | AGTTTTATCACTCTATGCTG+TGG | - | chr3.2:21148338-21148357 | MS.gene77958:intron | 35.0% |
| !! | ATAATATTGGCTTGGTGGTT+GGG | + | chr3.2:21149009-21149028 | None:intergenic | 35.0% |
| !! | CACCCCCAATTTAATTTTCA+AGG | + | chr3.2:21148147-21148166 | None:intergenic | 35.0% |
| !! | CATCTTCCTGTTTTTCTTTG+AGG | + | chr3.2:21148884-21148903 | None:intergenic | 35.0% |
| !! | GATGGGAAATTGGTAATGAA+GGG | - | chr3.2:21147072-21147091 | MS.gene77958:intron | 35.0% |
| !! | TATAATATTGGCTTGGTGGT+TGG | + | chr3.2:21149010-21149029 | None:intergenic | 35.0% |
| !! | TATGTTTTGTACAGTGGACT+TGG | - | chr3.2:21147050-21147069 | MS.gene77958:intron | 35.0% |
| !! | TCTTCCTCTGGAATAGATAT+GGG | + | chr3.2:21150439-21150458 | None:intergenic | 35.0% |
| !! | TTCTTCCTCTGGAATAGATA+TGG | + | chr3.2:21150440-21150459 | None:intergenic | 35.0% |
| !! | TTTTCAGGCATATATTCTGG+AGG | + | chr3.2:21151835-21151854 | None:intergenic | 35.0% |
| AATTTCCTGGCTCAAGAACT+TGG | - | chr3.2:21149899-21149918 | MS.gene77958:intron | 40.0% | |
| ACATTTACGCACCAGCTTTA+AGG | + | chr3.2:21148817-21148836 | None:intergenic | 40.0% | |
| ACCATTCGTTTCATCTGACT+AGG | + | chr3.2:21146912-21146931 | None:intergenic | 40.0% | |
| ATCAACACATCCCTTAAAGC+TGG | - | chr3.2:21148803-21148822 | MS.gene77958:CDS | 40.0% | |
| ATGATAAGAGTTGGACACCT+GGG | - | chr3.2:21148586-21148605 | MS.gene77958:intron | 40.0% | |
| ATTTCCACATGGTGGTAACT+TGG | - | chr3.2:21149264-21149283 | MS.gene77958:intron | 40.0% | |
| CAAATCTTCTTGAGGCAATG+TGG | + | chr3.2:21149856-21149875 | None:intergenic | 40.0% | |
| CATTAACTTATACAGACCCC+AGG | + | chr3.2:21148606-21148625 | None:intergenic | 40.0% | |
| CCGATGATTATCAGATGTCA+CGG | + | chr3.2:21150714-21150733 | None:intergenic | 40.0% | |
| CCGTGACATCTGATAATCAT+CGG | - | chr3.2:21150711-21150730 | MS.gene77958:intron | 40.0% | |
| CTAACATAACCTCTTACCAC+CGG | + | chr3.2:21146999-21147018 | None:intergenic | 40.0% | |
| CTAACTGTTCTTTGTTAGCC+TGG | + | chr3.2:21148263-21148282 | None:intergenic | 40.0% | |
| CTGTCAAATAGCAACTGTAG+TGG | - | chr3.2:21147537-21147556 | MS.gene77958:intron | 40.0% | |
| CTGTGGTTATAACATCCAAC+AGG | - | chr3.2:21149465-21149484 | MS.gene77958:intron | 40.0% | |
| CTGTTGGATGTTATAACCAC+AGG | + | chr3.2:21149467-21149486 | None:intergenic | 40.0% | |
| CTTGGACCTCAAAGAAAAAC+AGG | - | chr3.2:21148875-21148894 | MS.gene77958:intron | 40.0% | |
| GAACAATGGCTTCTTGCATA+AGG | + | chr3.2:21151621-21151640 | None:intergenic | 40.0% | |
| GAATGTTGTGGTGATCTGTA+TGG | - | chr3.2:21151037-21151056 | MS.gene77958:intron | 40.0% | |
| GACATGCTGATATTCACTAG+TGG | + | chr3.2:21149935-21149954 | None:intergenic | 40.0% | |
| GATCATAGAGATGATCTGGA+TGG | - | chr3.2:21150545-21150564 | MS.gene77958:intron | 40.0% | |
| GATTAACCACATTCTTCCTC+TGG | + | chr3.2:21150451-21150470 | None:intergenic | 40.0% | |
| GGAAACAATCTACGTGCTAA+AGG | + | chr3.2:21148538-21148557 | None:intergenic | 40.0% | |
| GGACAAAGCCTATAATGTCT+TGG | + | chr3.2:21151733-21151752 | None:intergenic | 40.0% | |
| GGTGGTAAGAGGTTATGTTA+GGG | - | chr3.2:21146998-21147017 | MS.gene77958:intron | 40.0% | |
| GTAGAATGATAAGGAGGTTG+AGG | + | chr3.2:21148970-21148989 | None:intergenic | 40.0% | |
| GTCATTGTTGTGTTAGTGTC+TGG | - | chr3.2:21147357-21147376 | MS.gene77958:intron | 40.0% | |
| TAGCACGTAGATTGTTTCCT+GGG | - | chr3.2:21148539-21148558 | MS.gene77958:intron | 40.0% | |
| TATGATAAGAGTTGGACACC+TGG | - | chr3.2:21148585-21148604 | MS.gene77958:intron | 40.0% | |
| TCAAACATAAAGTCGGGAAC+AGG | + | chr3.2:21150128-21150147 | None:intergenic | 40.0% | |
| TCCTAGTCAGATGAAACGAA+TGG | - | chr3.2:21146908-21146927 | MS.gene77958:intron | 40.0% | |
| TCTACGGATATAGATCCATG+GGG | + | chr3.2:21148668-21148687 | None:intergenic | 40.0% | |
| TCTATTCCAGAGGAAGAATG+TGG | - | chr3.2:21150442-21150461 | MS.gene77958:intron | 40.0% | |
| TGATAATCATCGGCAACTTC+TGG | - | chr3.2:21150721-21150740 | MS.gene77958:intron | 40.0% | |
| TGCCCAAGAAAGTTAGTCAA+AGG | + | chr3.2:21150578-21150597 | None:intergenic | 40.0% | |
| TTAACAGCACCCTCAATTAC+TGG | + | chr3.2:21149833-21149852 | None:intergenic | 40.0% | |
| TTAGCACGTAGATTGTTTCC+TGG | - | chr3.2:21148538-21148557 | MS.gene77958:intron | 40.0% | |
| TTATTCCAGCCAAGTCTCTT+GGG | - | chr3.2:21150641-21150660 | MS.gene77958:intron | 40.0% | |
| TTGATCGGGAATTGCAAATC+CGG | + | chr3.2:21146770-21146789 | None:intergenic | 40.0% | |
| TTTATTCCAGCCAAGTCTCT+TGG | - | chr3.2:21150640-21150659 | MS.gene77958:intron | 40.0% | |
| TTTGACTAACTTTCTTGGGC+AGG | - | chr3.2:21150577-21150596 | MS.gene77958:intron | 40.0% | |
| ! | ATGAAGACAATGAAGTACCC+AGG | + | chr3.2:21148559-21148578 | None:intergenic | 40.0% |
| ! | CATTTACGCACCAGCTTTAA+GGG | + | chr3.2:21148816-21148835 | None:intergenic | 40.0% |
| ! | GCCTCAAGAAGATTTGAGTT+TGG | - | chr3.2:21149860-21149879 | MS.gene77958:intron | 40.0% |
| ! | GCTGATATTCACTAGTGGAT+TGG | + | chr3.2:21149930-21149949 | None:intergenic | 40.0% |
| ! | GTGATCTGTATGGTGATGTT+TGG | - | chr3.2:21151047-21151066 | MS.gene77958:intron | 40.0% |
| ! | GTTAGCTCTTGCATTCAAGT+TGG | - | chr3.2:21149117-21149136 | MS.gene77958:intron | 40.0% |
| ! | TCGGGGATATAATATTGGCT+TGG | + | chr3.2:21149017-21149036 | None:intergenic | 40.0% |
| ! | TTTGTACAGTGGACTTGGAT+GGG | - | chr3.2:21147055-21147074 | MS.gene77958:intron | 40.0% |
| !! | AATACCTTTGGGGTACAAAG+TGG | + | chr3.2:21147116-21147135 | None:intergenic | 40.0% |
| !! | CATATCAGGGTTTTATGCCT+CGG | - | chr3.2:21148308-21148327 | MS.gene77958:intron | 40.0% |
| !! | CTTCCTCTGGAATAGATATG+GGG | + | chr3.2:21150438-21150457 | None:intergenic | 40.0% |
| !! | GGATGGGAAATTGGTAATGA+AGG | - | chr3.2:21147071-21147090 | MS.gene77958:intron | 40.0% |
| !! | GGGATATAATATTGGCTTGG+TGG | + | chr3.2:21149014-21149033 | None:intergenic | 40.0% |
| !! | GTTGTCATTTGGTGTGGTTT+GGG | + | chr3.2:21149595-21149614 | None:intergenic | 40.0% |
| !! | TAATATTGGCTTGGTGGTTG+GGG | + | chr3.2:21149008-21149027 | None:intergenic | 40.0% |
| !! | TTTTGTACAGTGGACTTGGA+TGG | - | chr3.2:21147054-21147073 | MS.gene77958:intron | 40.0% |
| AACCATGTATTCTGCATGGG+TGG | - | chr3.2:21151858-21151877 | MS.gene77958:intron | 45.0% | |
| AACTTGTGTAACTGCCCTGT+TGG | + | chr3.2:21149483-21149502 | None:intergenic | 45.0% | |
| AAGGCAGACTACGACGAAAA+CGG | - | chr3.2:21151931-21151950 | MS.gene77958:CDS | 45.0% | |
| AATAGCATCACTTGGCAAGC+AGG | + | chr3.2:21151123-21151142 | None:intergenic | 45.0% | |
| ACCATGTATTCTGCATGGGT+GGG | - | chr3.2:21151859-21151878 | MS.gene77958:intron | 45.0% | |
| ATGGTAACCAAGGAGGCAAA+TGG | + | chr3.2:21148001-21148020 | None:intergenic | 45.0% | |
| ATTTGCCAAGTTCTTGAGCC+AGG | + | chr3.2:21149907-21149926 | None:intergenic | 45.0% | |
| CATTTCCGGTGAACAATGGA+AGG | + | chr3.2:21151958-21151977 | None:intergenic | 45.0% | |
| CGGTGGTAAGAGGTTATGTT+AGG | - | chr3.2:21146997-21147016 | MS.gene77958:intron | 45.0% | |
| CTAGTATTGCTTCTTGCTGC+AGG | - | chr3.2:21151355-21151374 | MS.gene77958:intron | 45.0% | |
| CTGGTGCGTAAATGTATGCA+TGG | - | chr3.2:21148822-21148841 | MS.gene77958:CDS | 45.0% | |
| CTTGGGCAGGTGATAACAAT+TGG | - | chr3.2:21150590-21150609 | MS.gene77958:intron | 45.0% | |
| GAATTGCAAATCCGGCTTTG+AGG | + | chr3.2:21146762-21146781 | None:intergenic | 45.0% | |
| GACAGAAAACTCTTGTCCTG+TGG | - | chr3.2:21150018-21150037 | MS.gene77958:intron | 45.0% | |
| GTACACGCCTTCAAATTGGA+GGG | - | chr3.2:21147401-21147420 | MS.gene77958:intron | 45.0% | |
| TATCACTCTATGCTGTGGGA+AGG | - | chr3.2:21148343-21148362 | MS.gene77958:intron | 45.0% | |
| TATCCGCGATTGTCAACACT+GGG | - | chr3.2:21147610-21147629 | MS.gene77958:intron | 45.0% | |
| TATTCCAGCCAAGTCTCTTG+GGG | - | chr3.2:21150642-21150661 | MS.gene77958:intron | 45.0% | |
| TCGCGGATAGCAGAAAATAG+AGG | + | chr3.2:21147599-21147618 | None:intergenic | 45.0% | |
| TCTGGATGCACAGTTGACAT+TGG | - | chr3.2:21148369-21148388 | MS.gene77958:intron | 45.0% | |
| TGATAAAACTGCCTGTTCCG+AGG | + | chr3.2:21148328-21148347 | None:intergenic | 45.0% | |
| TGATAAGAGTTGGACACCTG+GGG | - | chr3.2:21148587-21148606 | MS.gene77958:intron | 45.0% | |
| TGCACAGTTGACATTGGTCA+TGG | - | chr3.2:21148375-21148394 | MS.gene77958:intron | 45.0% | |
| TGTCCCCATATCTATTCCAG+AGG | - | chr3.2:21150432-21150451 | MS.gene77958:intron | 45.0% | |
| TGTTAGGGATTGGGATGCAA+TGG | - | chr3.2:21147013-21147032 | MS.gene77958:intron | 45.0% | |
| TGTTCCAAGTTACCACCATG+TGG | + | chr3.2:21149271-21149290 | None:intergenic | 45.0% | |
| TGTTCGACCTACCTTGGTTA+AGG | - | chr3.2:21151423-21151442 | MS.gene77958:intron | 45.0% | |
| TGTTTGACGAAGCACAGACA+CGG | - | chr3.2:21147263-21147282 | MS.gene77958:intron | 45.0% | |
| ! | AGTGGACTTGGATGGGAAAT+TGG | - | chr3.2:21147062-21147081 | MS.gene77958:intron | 45.0% |
| ! | CACACTTTATCGTTAGCCTG+TGG | - | chr3.2:21149448-21149467 | MS.gene77958:intron | 45.0% |
| ! | CATTCGGTTGTCATTTGGTG+TGG | + | chr3.2:21149601-21149620 | None:intergenic | 45.0% |
| ! | CTCCAATTTGAAGGCGTGTA+CGG | + | chr3.2:21147402-21147421 | None:intergenic | 45.0% |
| ! | GAAGCATTTCCGGTGAACAA+TGG | + | chr3.2:21151962-21151981 | None:intergenic | 45.0% |
| ! | TAACGGTAATGGTCAGTTGG+TGG | - | chr3.2:21146953-21146972 | MS.gene77958:intron | 45.0% |
| !! | GAAAGGGGGTATTGTTACCA+TGG | + | chr3.2:21146800-21146819 | None:intergenic | 45.0% |
| !! | GGTTGTCATTTGGTGTGGTT+TGG | + | chr3.2:21149596-21149615 | None:intergenic | 45.0% |
| !! | TGGTAACGGTAATGGTCAGT+TGG | - | chr3.2:21146950-21146969 | MS.gene77958:intron | 45.0% |
| AAAAGGCAGACCTGTCCATC+AGG | + | chr3.2:21150058-21150077 | None:intergenic | 50.0% | |
| ACGCCTTCAAATTGGAGGGT+TGG | - | chr3.2:21147405-21147424 | MS.gene77958:intron | 50.0% | |
| ACTTGGCAAGCAGGACATCT+CGG | + | chr3.2:21151114-21151133 | None:intergenic | 50.0% | |
| AGCGTATCCCAGAGCAATAG+CGG | + | chr3.2:21147502-21147521 | None:intergenic | 50.0% | |
| AGGCAGACTACGACGAAAAC+GGG | - | chr3.2:21151932-21151951 | MS.gene77958:CDS | 50.0% | |
| ATCCGCGATTGTCAACACTG+GGG | - | chr3.2:21147611-21147630 | MS.gene77958:intron | 50.0% | |
| ATCTGCTGTTCGACCTACCT+TGG | - | chr3.2:21151417-21151436 | MS.gene77958:intron | 50.0% | |
| ATGTATTCTGCATGGGTGGG+AGG | - | chr3.2:21151862-21151881 | MS.gene77958:intron | 50.0% | |
| CAAACAACCCAGTGCCTAGT+TGG | + | chr3.2:21148114-21148133 | None:intergenic | 50.0% | |
| CACCGTACACGCCTTCAAAT+TGG | - | chr3.2:21147397-21147416 | MS.gene77958:intron | 50.0% | |
| CGCCTTCAAATTGGAGGGTT+GGG | - | chr3.2:21147406-21147425 | MS.gene77958:intron | 50.0% | |
| CGTACACGCCTTCAAATTGG+AGG | - | chr3.2:21147400-21147419 | MS.gene77958:intron | 50.0% | |
| CTAGGCTCTCTGATTCCTAG+AGG | + | chr3.2:21149567-21149586 | None:intergenic | 50.0% | |
| CTATCCGCGATTGTCAACAC+TGG | - | chr3.2:21147609-21147628 | MS.gene77958:intron | 50.0% | |
| CTCTCTGATTCCTAGAGGAG+TGG | + | chr3.2:21149562-21149581 | None:intergenic | 50.0% | |
| CTCTTGGGGTTAGAGACTCA+TGG | - | chr3.2:21150656-21150675 | MS.gene77958:intron | 50.0% | |
| GAGACACATACCCTTCCTGA+TGG | - | chr3.2:21150040-21150059 | MS.gene77958:intron | 50.0% | |
| GCCTTCAAATTGGAGGGTTG+GGG | - | chr3.2:21147407-21147426 | MS.gene77958:intron | 50.0% | |
| GGATCCACTTTGTACCCCAA+AGG | - | chr3.2:21147109-21147128 | MS.gene77958:intron | 50.0% | |
| GGGTTATCCAACTAGGCACT+GGG | - | chr3.2:21148104-21148123 | MS.gene77958:intron | 50.0% | |
| GTCTCTAACCCCAAGAGACT+TGG | + | chr3.2:21150653-21150672 | None:intergenic | 50.0% | |
| TAGGGATTGGGATGCAATGG+AGG | - | chr3.2:21147016-21147035 | MS.gene77958:intron | 50.0% | |
| TATAGATCCATGGGGCTGAG+AGG | + | chr3.2:21148660-21148679 | None:intergenic | 50.0% | |
| TATGCTGTGGGAAGGATCTC+TGG | - | chr3.2:21148351-21148370 | MS.gene77958:intron | 50.0% | |
| TCCCACCCATGCAGAATACA+TGG | + | chr3.2:21151863-21151882 | None:intergenic | 50.0% | |
| TGGGTTATCCAACTAGGCAC+TGG | - | chr3.2:21148103-21148122 | MS.gene77958:intron | 50.0% | |
| ! | ACACTGGTTACTGAAGAGGG+AGG | - | chr3.2:21150200-21150219 | MS.gene77958:intron | 50.0% |
| ! | ACATACCCTTCCTGATGGAC+AGG | - | chr3.2:21150045-21150064 | MS.gene77958:intron | 50.0% |
| ! | TACCATGGCGGGAGTTTGAT+CGG | + | chr3.2:21146785-21146804 | None:intergenic | 50.0% |
| !! | AGGGGGTATTGTTACCATGG+CGG | + | chr3.2:21146797-21146816 | None:intergenic | 50.0% |
| !! | AGGGTTTTATGCCTCGGAAC+AGG | - | chr3.2:21148314-21148333 | MS.gene77958:intron | 50.0% |
| !! | ATCCCCAGTGTTGACAATCG+CGG | + | chr3.2:21147616-21147635 | None:intergenic | 50.0% |
| !! | TTGCAAATCCGGCTTTGAGG+AGG | + | chr3.2:21146759-21146778 | None:intergenic | 50.0% |
| AAGAAGTCCTCTCAGCCCCA+TGG | - | chr3.2:21148650-21148669 | MS.gene77958:CDS | 55.0% | |
| ACGGGCCTTCCATTGTTCAC+CGG | - | chr3.2:21151950-21151969 | MS.gene77958:CDS | 55.0% | |
| CTAACCCCAAGAGACTTGGC+TGG | + | chr3.2:21150649-21150668 | None:intergenic | 55.0% | |
| GCAGACCTGTCCATCAGGAA+GGG | + | chr3.2:21150053-21150072 | None:intergenic | 55.0% | |
| GCCCCAACCCTCCAATTTGA+AGG | + | chr3.2:21147411-21147430 | None:intergenic | 55.0% | |
| ! | ACCATGGCGGGAGTTTGATC+GGG | + | chr3.2:21146784-21146803 | None:intergenic | 55.0% |
| ! | GGAAGGGTATGTGTCTCCAC+AGG | + | chr3.2:21150037-21150056 | None:intergenic | 55.0% |
| ! | GGTGTGGTTTGGGAGAGACT+AGG | + | chr3.2:21149585-21149604 | None:intergenic | 55.0% |
| !! | AAATCCGGCTTTGAGGAGGC+TGG | + | chr3.2:21146755-21146774 | None:intergenic | 55.0% |
| !! | ATTGGCTTGGTGGTTGGGGT+GGG | + | chr3.2:21149004-21149023 | None:intergenic | 55.0% |
| !! | CGGTAATGGTCAGTTGGTGG+TGG | - | chr3.2:21146956-21146975 | MS.gene77958:intron | 55.0% |
| !! | GGAACCAGCGTCGATTACTG+CGG | + | chr3.2:21146734-21146753 | None:intergenic | 55.0% |
| !! | GGGGGTATTGTTACCATGGC+GGG | + | chr3.2:21146796-21146815 | None:intergenic | 55.0% |
| !! | GTTGGTGGTGGATGATGTCG+CGG | - | chr3.2:21146968-21146987 | MS.gene77958:intron | 55.0% |
| !! | TATTGGCTTGGTGGTTGGGG+TGG | + | chr3.2:21149005-21149024 | None:intergenic | 55.0% |
| GAAGCCGCAGTAATCGACGC+TGG | - | chr3.2:21146727-21146746 | MS.gene77958:CDS | 60.0% | |
| GGATGATGTCGCGGTTGAGC+CGG | - | chr3.2:21146977-21146996 | MS.gene77958:intron | 60.0% | |
| GGCAGACCTGTCCATCAGGA+AGG | + | chr3.2:21150054-21150073 | None:intergenic | 60.0% | |
| GGCGGCACTTCTTCCATGAC+TGG | - | chr3.2:21150761-21150780 | MS.gene77958:intron | 60.0% | |
| GGTTCCAGCCTCCTCAAAGC+CGG | - | chr3.2:21146748-21146767 | MS.gene77958:CDS | 60.0% | |
| TCCCGATCAAACTCCCGCCA+TGG | - | chr3.2:21146780-21146799 | MS.gene77958:CDS | 60.0% | |
| GCGGTTGAGCCGGTGGTAAG+AGG | - | chr3.2:21146987-21147006 | MS.gene77958:intron | 65.0% | |
| TGATGTCGCGGTTGAGCCGG+TGG | - | chr3.2:21146980-21146999 | MS.gene77958:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 21146724 | 21151984 | 21146724 | ID=MS.gene77958 |
| chr3.2 | mRNA | 21146724 | 21151984 | 21146724 | ID=MS.gene77958.t1;Parent=MS.gene77958 |
| chr3.2 | exon | 21151907 | 21151984 | 21151907 | ID=MS.gene77958.t1.exon1;Parent=MS.gene77958.t1 |
| chr3.2 | CDS | 21151907 | 21151984 | 21151907 | ID=cds.MS.gene77958.t1;Parent=MS.gene77958.t1 |
| chr3.2 | exon | 21151578 | 21151805 | 21151578 | ID=MS.gene77958.t1.exon2;Parent=MS.gene77958.t1 |
| chr3.2 | CDS | 21151578 | 21151805 | 21151578 | ID=cds.MS.gene77958.t1;Parent=MS.gene77958.t1 |
| chr3.2 | exon | 21150303 | 21150444 | 21150303 | ID=MS.gene77958.t1.exon3;Parent=MS.gene77958.t1 |
| chr3.2 | CDS | 21150303 | 21150444 | 21150303 | ID=cds.MS.gene77958.t1;Parent=MS.gene77958.t1 |
| chr3.2 | exon | 21148642 | 21148886 | 21148642 | ID=MS.gene77958.t1.exon4;Parent=MS.gene77958.t1 |
| chr3.2 | CDS | 21148642 | 21148886 | 21148642 | ID=cds.MS.gene77958.t1;Parent=MS.gene77958.t1 |
| chr3.2 | exon | 21147926 | 21148109 | 21147926 | ID=MS.gene77958.t1.exon5;Parent=MS.gene77958.t1 |
| chr3.2 | CDS | 21147926 | 21148109 | 21147926 | ID=cds.MS.gene77958.t1;Parent=MS.gene77958.t1 |
| chr3.2 | exon | 21147264 | 21147331 | 21147264 | ID=MS.gene77958.t1.exon6;Parent=MS.gene77958.t1 |
| chr3.2 | CDS | 21147264 | 21147331 | 21147264 | ID=cds.MS.gene77958.t1;Parent=MS.gene77958.t1 |
| chr3.2 | exon | 21146724 | 21146876 | 21146724 | ID=MS.gene77958.t1.exon7;Parent=MS.gene77958.t1 |
| chr3.2 | CDS | 21146724 | 21146876 | 21146724 | ID=cds.MS.gene77958.t1;Parent=MS.gene77958.t1 |
| Gene Sequence |
| Protein sequence |
