Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83830.t1 | XP_024635751.1 | 80.7 | 88 | 17 | 0 | 1 | 88 | 1 | 88 | 5.00E-29 | 139 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83830.t1 | Q9FNR1 | 42.0 | 88 | 47 | 2 | 1 | 88 | 1 | 84 | 8.1e-12 | 73.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83830.t1 | G7IZB0 | 80.7 | 88 | 17 | 0 | 1 | 88 | 1 | 88 | 3.6e-29 | 139.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene83830 | 0.817266 | 3.61E-52 | -1.69E-46 |
| MS.gene049255 | MS.gene83830 | 0.809545 | 1.79E-50 | -1.69E-46 |
| MS.gene049473 | MS.gene83830 | 0.801847 | 7.42E-49 | -1.69E-46 |
| MS.gene049824 | MS.gene83830 | 0.831911 | 1.28E-55 | -1.69E-46 |
| MS.gene049825 | MS.gene83830 | 0.852693 | 3.90E-61 | -1.69E-46 |
| MS.gene049873 | MS.gene83830 | 0.844179 | 8.88E-59 | -1.69E-46 |
| MS.gene050277 | MS.gene83830 | 0.835151 | 1.98E-56 | -1.69E-46 |
| MS.gene050303 | MS.gene83830 | 0.851764 | 7.18E-61 | -1.69E-46 |
| MS.gene050559 | MS.gene83830 | 0.805687 | 1.18E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene83830 | 0.805367 | 1.38E-49 | -1.69E-46 |
| MS.gene05134 | MS.gene83830 | 0.835446 | 1.67E-56 | -1.69E-46 |
| MS.gene051700 | MS.gene83830 | 0.801988 | 6.94E-49 | -1.69E-46 |
| MS.gene05188 | MS.gene83830 | 0.80969 | 1.67E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene83830 | 0.803372 | 3.60E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene83830 | 0.815065 | 1.12E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene83830 | 0.832264 | 1.04E-55 | -1.69E-46 |
| MS.gene052947 | MS.gene83830 | 0.830146 | 3.46E-55 | -1.69E-46 |
| MS.gene053006 | MS.gene83830 | 0.80833 | 3.27E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene83830 | 0.801521 | 8.66E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene83830 | 0.824852 | 6.45E-54 | -1.69E-46 |
| MS.gene053122 | MS.gene83830 | 0.825297 | 5.06E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene83830 | 0.843933 | 1.03E-58 | -1.69E-46 |
| MS.gene053230 | MS.gene83830 | 0.817462 | 3.26E-52 | -1.69E-46 |
| MS.gene053294 | MS.gene83830 | 0.813841 | 2.09E-51 | -1.69E-46 |
| MS.gene053931 | MS.gene83830 | 0.806149 | 9.47E-50 | -1.69E-46 |
| MS.gene053995 | MS.gene83830 | 0.830681 | 2.56E-55 | -1.69E-46 |
| MS.gene054657 | MS.gene83830 | 0.806098 | 9.70E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene83830 | 0.817287 | 3.57E-52 | -1.69E-46 |
| MS.gene055555 | MS.gene83830 | 0.830107 | 3.54E-55 | -1.69E-46 |
| MS.gene055778 | MS.gene83830 | 0.810098 | 1.36E-50 | -1.69E-46 |
| MS.gene055808 | MS.gene83830 | 0.888512 | 5.53E-73 | -1.69E-46 |
| MS.gene055841 | MS.gene83830 | 0.804804 | 1.81E-49 | -1.69E-46 |
| MS.gene056091 | MS.gene83830 | 0.870469 | 1.43E-66 | -1.69E-46 |
| MS.gene056215 | MS.gene83830 | 0.824232 | 9.02E-54 | -1.69E-46 |
| MS.gene056403 | MS.gene83830 | 0.819484 | 1.13E-52 | -1.69E-46 |
| MS.gene056605 | MS.gene83830 | 0.805551 | 1.26E-49 | -1.69E-46 |
| MS.gene056631 | MS.gene83830 | 0.849426 | 3.26E-60 | -1.69E-46 |
| MS.gene05689 | MS.gene83830 | 0.838397 | 2.95E-57 | -1.69E-46 |
| MS.gene056986 | MS.gene83830 | 0.803403 | 3.55E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene83830 | 0.820623 | 6.22E-53 | -1.69E-46 |
| MS.gene057079 | MS.gene83830 | 0.814439 | 1.54E-51 | -1.69E-46 |
| MS.gene057555 | MS.gene83830 | 0.819443 | 1.16E-52 | -1.69E-46 |
| MS.gene057693 | MS.gene83830 | 0.807059 | 6.08E-50 | -1.69E-46 |
| MS.gene057705 | MS.gene83830 | 0.873816 | 1.10E-67 | -1.69E-46 |
| MS.gene05795 | MS.gene83830 | 0.800548 | 1.37E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene83830 | 0.80007 | 1.71E-48 | -1.69E-46 |
| MS.gene058216 | MS.gene83830 | 0.815097 | 1.10E-51 | -1.69E-46 |
| MS.gene05953 | MS.gene83830 | 0.846699 | 1.84E-59 | -1.69E-46 |
| MS.gene05954 | MS.gene83830 | 0.866262 | 3.24E-65 | -1.69E-46 |
| MS.gene059935 | MS.gene83830 | 0.847101 | 1.43E-59 | -1.69E-46 |
| MS.gene06001 | MS.gene83830 | 0.833625 | 4.79E-56 | -1.69E-46 |
| MS.gene060365 | MS.gene83830 | 0.81706 | 4.01E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene83830 | 0.871801 | 5.18E-67 | -1.69E-46 |
| MS.gene060521 | MS.gene83830 | 0.814551 | 1.45E-51 | -1.69E-46 |
| MS.gene060830 | MS.gene83830 | 0.821136 | 4.74E-53 | -1.69E-46 |
| MS.gene060917 | MS.gene83830 | 0.81811 | 2.33E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83830.t1 | MTR_3g025880 | 75.899 | 278 | 24 | 6 | 137 | 381 | 168 | 435 | 1.34e-93 | 289 |
| MS.gene83830.t1 | MTR_4g109540 | 53.409 | 88 | 39 | 1 | 1 | 88 | 1 | 86 | 1.47e-25 | 105 |
| MS.gene83830.t1 | MTR_4g109540 | 50.000 | 96 | 38 | 2 | 1 | 88 | 1 | 94 | 3.88e-23 | 98.6 |
| MS.gene83830.t1 | MTR_7g013730 | 50.000 | 88 | 40 | 2 | 1 | 88 | 1 | 84 | 6.22e-19 | 86.3 |
| MS.gene83830.t1 | MTR_7g013740 | 50.000 | 76 | 34 | 2 | 1 | 76 | 1 | 72 | 7.74e-15 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 139 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTCTCCACCACTGTAAT+TGG | 0.187885 | 3.2:+15847122 | None:intergenic |
| GCTTCTGGTGTTGGTGGTTA+TGG | 0.242800 | 3.2:-15847345 | MS.gene83830:CDS |
| GTAGAGTTGGGAGTTTATTA+AGG | 0.262081 | 3.2:-15850246 | MS.gene83830:CDS |
| GCTAACTATGGCAGTGCTTC+TGG | 0.279898 | 3.2:-15847360 | MS.gene83830:CDS |
| CTATACCCTGTTGCACTTCC+AGG | 0.289310 | 3.2:+15846964 | None:intergenic |
| CCTCCTGGTGTTGGTGGTTA+TGG | 0.295984 | 3.2:-15847588 | MS.gene83830:CDS |
| CCTCCTGGTGTTGGTGGTTA+TGG | 0.295984 | 3.2:-15847762 | MS.gene83830:CDS |
| GCTCCTGGTGTTGGTGGTTA+TGG | 0.311859 | 3.2:-15847078 | MS.gene83830:CDS |
| GCACCTGGTGTTGGTGGTTA+TGG | 0.314342 | 3.2:-15847159 | MS.gene83830:CDS |
| CACTTCCAGGGTATTGATTA+CGG | 0.314514 | 3.2:+15846977 | None:intergenic |
| TATGGTGCTGCTGCTGGATT+TGG | 0.314919 | 3.2:-15847060 | MS.gene83830:CDS |
| GCTCCTGTTGCTGGTGTTTA+CGG | 0.332135 | 3.2:-15847252 | MS.gene83830:CDS |
| GCTCCTAGTGTTGGTGGTTA+TGG | 0.335313 | 3.2:-15847501 | MS.gene83830:CDS |
| GCTCCTAGTGTTGGTGGTTA+TGG | 0.335313 | 3.2:-15847675 | MS.gene83830:CDS |
| CCAAGCCATACGGTGCTTCT+CGG | 0.335689 | 3.2:-15850164 | MS.gene83830:CDS |
| GTTACAGTAATGGCTTTCTT+TGG | 0.352828 | 3.2:-15850268 | None:intergenic |
| GCTCCCGGGAGCAGCTTTGC+TGG | 0.358288 | 3.2:-15846928 | MS.gene83830:CDS |
| CAACACCACCGGTACTATAA+TGG | 0.362745 | 3.2:+15847025 | None:intergenic |
| CAATACCCTGGAAGTGCAAC+AGG | 0.364374 | 3.2:-15846970 | MS.gene83830:CDS |
| TACGGTAGTGCTCCTGTTGC+TGG | 0.368507 | 3.2:-15847261 | MS.gene83830:CDS |
| GGTGGTTATGGTGCTGCTGC+TGG | 0.370957 | 3.2:-15847066 | MS.gene83830:CDS |
| GCTCCTGGCGTTGGTGGTTA+TGG | 0.373050 | 3.2:-15847414 | MS.gene83830:CDS |
| TCCTACAAACAGCTTGGTAT+TGG | 0.375210 | 3.2:+15850135 | None:intergenic |
| TATGGAAACAATGCAAATTA+TGG | 0.382926 | 3.2:-15847483 | MS.gene83830:CDS |
| TATGGAAACAATGCAAATTA+TGG | 0.382926 | 3.2:-15847570 | MS.gene83830:CDS |
| TATGGAAACAATGCAAATTA+TGG | 0.382926 | 3.2:-15847657 | MS.gene83830:CDS |
| TATGGAAACAATGCAAATTA+TGG | 0.382926 | 3.2:-15847744 | MS.gene83830:CDS |
| TGGCTTTCTTTGGTAGAGTT+GGG | 0.383300 | 3.2:-15850258 | MS.gene83830:CDS |
| GAAAGCAATTCTGTTAACTA+TGG | 0.398237 | 3.2:-15847186 | MS.gene83830:CDS |
| CCTACAAACAGCTTGGTATT+GGG | 0.403404 | 3.2:+15850136 | None:intergenic |
| ACTTCCAGGGTATTGATTAC+GGG | 0.413785 | 3.2:+15846978 | None:intergenic |
| GGTGCTAACAATGCAAATTA+TGG | 0.418800 | 3.2:-15847228 | MS.gene83830:CDS |
| GGTGGAAACGATGCAAATTA+TGG | 0.422269 | 3.2:-15847831 | MS.gene83830:CDS |
| TATGATAGAACTGGAGGACT+TGG | 0.426268 | 3.2:-15846901 | MS.gene83830:CDS |
| ATGGCTTTCTTTGGTAGAGT+TGG | 0.429889 | 3.2:-15850259 | MS.gene83830:CDS |
| GGTGTTGGTGGTTATGGAGG+TGG | 0.431569 | 3.2:-15847339 | MS.gene83830:CDS |
| GAAAGCAATTCTGTTAACTA+TGG | 0.434507 | 3.2:-15847105 | MS.gene83830:CDS |
| GGAACTACCAGTGGTGGTTA+TGG | 0.436521 | 3.2:-15847852 | MS.gene83830:intron |
| ATAGTACCGGTGGTGTTGGT+GGG | 0.437403 | 3.2:-15847020 | MS.gene83830:CDS |
| GGCAGTGCTTCTGGTGTTGG+TGG | 0.442227 | 3.2:-15847351 | MS.gene83830:CDS |
| CCCAATACCAAGCTGTTTGT+AGG | 0.444353 | 3.2:-15850136 | MS.gene83830:CDS |
| CCACCGTAAACACCAGCAAC+AGG | 0.447301 | 3.2:+15847249 | None:intergenic |
| TATAGTACCGGTGGTGTTGG+TGG | 0.447497 | 3.2:-15847021 | MS.gene83830:CDS |
| GGTGGTAACAGTGCAAATTA+TGG | 0.457360 | 3.2:-15847321 | MS.gene83830:CDS |
| CAAGCCATACGGTGCTTCTC+GGG | 0.458672 | 3.2:-15850163 | MS.gene83830:CDS |
| GCTGCTGATACTGCTAACTA+TGG | 0.470068 | 3.2:-15847372 | MS.gene83830:CDS |
| TATGGCAGTGCTTCTGGTGT+TGG | 0.470255 | 3.2:-15847354 | MS.gene83830:CDS |
| GAAAGCAATGCTGTTAACTA+TGG | 0.472224 | 3.2:-15847441 | MS.gene83830:CDS |
| GAAAGCAATGCTGTTAACTA+TGG | 0.472224 | 3.2:-15847528 | MS.gene83830:CDS |
| GAAAGCAATGCTGTTAACTA+TGG | 0.472224 | 3.2:-15847615 | MS.gene83830:CDS |
| GAAAGCAATGCTGTTAACTA+TGG | 0.472224 | 3.2:-15847789 | MS.gene83830:CDS |
| ACAACTCACCGTCAAGAACT+TGG | 0.473731 | 3.2:+15849616 | None:intergenic |
| GTTAACTATGGTAGTGCTCC+TGG | 0.474066 | 3.2:-15847093 | MS.gene83830:CDS |
| TCCACCAGCAAAGCTGCTCC+CGG | 0.475573 | 3.2:+15846924 | None:intergenic |
| GAAAGCATTGCTGTTAACTA+TGG | 0.481283 | 3.2:-15847702 | MS.gene83830:CDS |
| ATTACGGGAGAAACCATTGC+TGG | 0.481459 | 3.2:+15846993 | None:intergenic |
| GCTGGTGGATATGATAGAAC+TGG | 0.486983 | 3.2:-15846910 | MS.gene83830:CDS |
| GGTGTTGGTGGTTATGGTGG+TGG | 0.487083 | 3.2:-15847153 | MS.gene83830:CDS |
| GGTAGTGCTCCTGGTGTTGG+TGG | 0.492463 | 3.2:-15847084 | MS.gene83830:CDS |
| GGTAGTCCTCCTGGTGTTGG+TGG | 0.492463 | 3.2:-15847594 | MS.gene83830:CDS |
| GGTAGTCCTCCTGGTGTTGG+TGG | 0.492463 | 3.2:-15847768 | MS.gene83830:CDS |
| CCGAGAAGCACCGTATGGCT+TGG | 0.494835 | 3.2:+15850164 | None:intergenic |
| GTTAACTATGGTAGTCCTCC+TGG | 0.498449 | 3.2:-15847603 | MS.gene83830:CDS |
| GTTAACTATGGTAGTCCTCC+TGG | 0.498449 | 3.2:-15847777 | MS.gene83830:CDS |
| GCACCATAACCACCAACACC+AGG | 0.502988 | 3.2:+15847075 | None:intergenic |
| AGCAGTGGCAGTTCAGCTCC+CGG | 0.508874 | 3.2:-15846943 | MS.gene83830:CDS |
| GTTAACTATGGTAGTGCTCC+TGG | 0.511260 | 3.2:-15847429 | MS.gene83830:CDS |
| GGTAGTGCACCTGGTGTTGG+TGG | 0.514951 | 3.2:-15847165 | MS.gene83830:CDS |
| CCCGGGAGCAGCTTTGCTGG+TGG | 0.515216 | 3.2:-15846925 | MS.gene83830:CDS |
| CGTATGGCTTGGAAAACAGA+TGG | 0.517156 | 3.2:+15850175 | None:intergenic |
| GGTAGTGCTCCTGGCGTTGG+TGG | 0.518106 | 3.2:-15847420 | MS.gene83830:CDS |
| CCTGGTGTTGGTGGTTATGG+TGG | 0.520748 | 3.2:-15847156 | MS.gene83830:CDS |
| TATGGTAGTGCTCCTGGTGT+TGG | 0.523204 | 3.2:-15847087 | MS.gene83830:CDS |
| GGTAGTGCTCCTAGTGTTGG+TGG | 0.524446 | 3.2:-15847507 | MS.gene83830:CDS |
| GGTAGTGCTCCTAGTGTTGG+TGG | 0.524446 | 3.2:-15847681 | MS.gene83830:CDS |
| CATTATAGTACCGGTGGTGT+TGG | 0.529829 | 3.2:-15847024 | MS.gene83830:CDS |
| TAGTACCGGTGGTGTTGGTG+GGG | 0.534630 | 3.2:-15847019 | MS.gene83830:CDS |
| TCTGGTGTTGGTGGTTATGG+AGG | 0.536257 | 3.2:-15847342 | MS.gene83830:CDS |
| AGTACCGGTGGTGTTGGTGG+GGG | 0.540589 | 3.2:-15847018 | MS.gene83830:CDS |
| TATACCCTGTTGCACTTCCA+GGG | 0.541487 | 3.2:+15846965 | None:intergenic |
| GCAAATTATGGTGCTGCTGT+AGG | 0.541604 | 3.2:-15847819 | MS.gene83830:CDS |
| TATGGTAGTCCTCCTGGTGT+TGG | 0.542111 | 3.2:-15847597 | MS.gene83830:CDS |
| TATGGTAGTCCTCCTGGTGT+TGG | 0.542111 | 3.2:-15847771 | MS.gene83830:CDS |
| GTTAACTATGGTAGTGCACC+TGG | 0.543191 | 3.2:-15847174 | MS.gene83830:CDS |
| TATGGTAACAATGTGAGTTA+TGG | 0.548828 | 3.2:-15847396 | MS.gene83830:CDS |
| CCACCAGCAAAGCTGCTCCC+GGG | 0.552776 | 3.2:+15846925 | None:intergenic |
| TATGGTAGTGCTCCTGGCGT+TGG | 0.553351 | 3.2:-15847423 | MS.gene83830:CDS |
| CTCACCTCCTACAAACAGCT+TGG | 0.553614 | 3.2:+15850129 | None:intergenic |
| GCAAATTATGGTGCGGCTGT+AGG | 0.554874 | 3.2:-15847309 | MS.gene83830:CDS |
| GCAAATTATGGTGCTGCTGT+AGG | 0.557750 | 3.2:-15847471 | MS.gene83830:CDS |
| GCAAATTATGGTGCTGCTGT+AGG | 0.557750 | 3.2:-15847558 | MS.gene83830:CDS |
| GCAAATTATGGTGCTGCTGT+AGG | 0.557750 | 3.2:-15847645 | MS.gene83830:CDS |
| GCAAATTATGGTGCTGCTGT+AGG | 0.557750 | 3.2:-15847732 | MS.gene83830:CDS |
| TATGGTAGTGCACCTGGTGT+TGG | 0.559778 | 3.2:-15847168 | MS.gene83830:CDS |
| GCAAATTATGGTGCTGCTGT+AGG | 0.562482 | 3.2:-15847216 | MS.gene83830:CDS |
| TATGGTGCGGCTGTAGGTGG+TGG | 0.566297 | 3.2:-15847303 | MS.gene83830:CDS |
| GGACTTGGATACGGTGAAAG+TGG | 0.567518 | 3.2:-15846886 | MS.gene83830:CDS |
| AGTGATAACCATTATAGTAC+CGG | 0.567539 | 3.2:-15847033 | MS.gene83830:CDS |
| TTTCCATAACCACCAACACT+AGG | 0.569001 | 3.2:+15847498 | None:intergenic |
| TTTCCATAACCACCAACACT+AGG | 0.569001 | 3.2:+15847672 | None:intergenic |
| TTCTCCCGTAATCAATACCC+TGG | 0.569136 | 3.2:-15846982 | MS.gene83830:CDS |
| CCACCATAACCACCAACACC+AGG | 0.573676 | 3.2:+15847156 | None:intergenic |
| TTACCATAACCACCAACGCC+AGG | 0.573970 | 3.2:+15847411 | None:intergenic |
| TATGGTAGTGCTCCTAGTGT+TGG | 0.577700 | 3.2:-15847510 | MS.gene83830:CDS |
| TATGGTAGTGCTCCTAGTGT+TGG | 0.577700 | 3.2:-15847684 | MS.gene83830:CDS |
| AGATATGGCCAAGTTCTTGA+CGG | 0.577723 | 3.2:-15849624 | MS.gene83830:intron |
| TTTCCATAACCACCAACACC+AGG | 0.577846 | 3.2:+15847585 | None:intergenic |
| TTTCCATAACCACCAACACC+AGG | 0.577846 | 3.2:+15847759 | None:intergenic |
| GCAGTGGCAGTTCAGCTCCC+GGG | 0.581433 | 3.2:-15846942 | MS.gene83830:CDS |
| GAAAGTAATTCTGTTAACTA+CGG | 0.582061 | 3.2:-15847279 | MS.gene83830:CDS |
| GTATGGCTTGGAAAACAGAT+GGG | 0.584601 | 3.2:+15850176 | None:intergenic |
| TATGGTGCTGCTGTAGGCGG+TGG | 0.593381 | 3.2:-15847465 | MS.gene83830:CDS |
| TATGGTGCTGCTGTAGGCGG+TGG | 0.593381 | 3.2:-15847552 | MS.gene83830:CDS |
| TATGGTGCTGCTGTAGGCGG+TGG | 0.593381 | 3.2:-15847639 | MS.gene83830:CDS |
| TATGGTGCTGCTGTAGGCGG+TGG | 0.593381 | 3.2:-15847726 | MS.gene83830:CDS |
| TATGGTGCTGCTGTAGGCGG+TGG | 0.593381 | 3.2:-15847813 | MS.gene83830:CDS |
| AATTATGGTGCGGCTGTAGG+TGG | 0.596398 | 3.2:-15847306 | MS.gene83830:CDS |
| AGAACTGGAGGACTTGGATA+CGG | 0.599018 | 3.2:-15846895 | MS.gene83830:CDS |
| AACAGTGCCAATTACAGTGG+TGG | 0.607861 | 3.2:-15847129 | MS.gene83830:CDS |
| AATACCAAGCTGTTTGTAGG+AGG | 0.614431 | 3.2:-15850133 | MS.gene83830:intron |
| TTACGGGAGAAACCATTGCT+GGG | 0.614736 | 3.2:+15846994 | None:intergenic |
| ACTACCAGTGGTGGTTATGG+TGG | 0.626441 | 3.2:-15847849 | MS.gene83830:intron |
| AGTACCCGAGAAGCACCGTA+TGG | 0.630479 | 3.2:+15850159 | None:intergenic |
| AATTATGGTGCTGCTGTAGG+CGG | 0.652021 | 3.2:-15847468 | MS.gene83830:CDS |
| AATTATGGTGCTGCTGTAGG+CGG | 0.652021 | 3.2:-15847555 | MS.gene83830:CDS |
| AATTATGGTGCTGCTGTAGG+CGG | 0.652021 | 3.2:-15847642 | MS.gene83830:CDS |
| AATTATGGTGCTGCTGTAGG+CGG | 0.652021 | 3.2:-15847729 | MS.gene83830:CDS |
| AATTATGGTGCTGCTGTAGG+CGG | 0.652021 | 3.2:-15847816 | MS.gene83830:CDS |
| CCTGTTGCTGGTGTTTACGG+TGG | 0.660993 | 3.2:-15847249 | MS.gene83830:CDS |
| GATAACCATTATAGTACCGG+TGG | 0.664559 | 3.2:-15847030 | MS.gene83830:CDS |
| AGTGCAACAGGGTATAGCAG+TGG | 0.673542 | 3.2:-15846958 | MS.gene83830:CDS |
| GGTGGATATGATAGAACTGG+AGG | 0.686015 | 3.2:-15846907 | MS.gene83830:CDS |
| TATGGCTTGGAAAACAGATG+GGG | 0.700345 | 3.2:+15850177 | None:intergenic |
| CCATAACCACCAACACCAGG+AGG | 0.710651 | 3.2:+15847588 | None:intergenic |
| CCATAACCACCAACACCAGG+AGG | 0.710651 | 3.2:+15847762 | None:intergenic |
| AATACCCTGGAAGTGCAACA+GGG | 0.711945 | 3.2:-15846969 | MS.gene83830:CDS |
| GGTAACAGTGCCAATTACAG+TGG | 0.753278 | 3.2:-15847132 | MS.gene83830:CDS |
| TAACAGTGCAAATTATGGTG+CGG | 0.758913 | 3.2:-15847316 | MS.gene83830:CDS |
| TCTGTGAGAAGATATCCATG+TGG | 0.775693 | 3.2:-15848459 | MS.gene83830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCATATATATTGAAA+AGG | - | chr3.2:15847023-15847042 | MS.gene83830:CDS | 10.0% |
| !!! | TAAATATAGAAATTTAGTTT+TGG | - | chr3.2:15848833-15848852 | MS.gene83830:intron | 10.0% |
| !!! | TTGTCTAATTATTATTTTTT+TGG | - | chr3.2:15848430-15848449 | MS.gene83830:intron | 10.0% |
| !! | ATACTTCATGTTAATTTAAT+TGG | - | chr3.2:15848740-15848759 | MS.gene83830:intron | 15.0% |
| !! | CATTCATAAATAAATAAGAA+AGG | + | chr3.2:15848989-15849008 | None:intergenic | 15.0% |
| !! | TTAAACAATAAATATTGCAT+TGG | + | chr3.2:15848902-15848921 | None:intergenic | 15.0% |
| !!! | AATTATTATTTTTTTGGTAG+TGG | - | chr3.2:15848436-15848455 | MS.gene83830:intron | 15.0% |
| !!! | CAATTATGGATTAATTATAT+AGG | + | chr3.2:15848539-15848558 | None:intergenic | 15.0% |
| !! | AAATTATTTATCAGTGTCTA+CGG | + | chr3.2:15847131-15847150 | None:intergenic | 20.0% |
| !! | ATAAGAAAGGTAAAAGTAAT+AGG | + | chr3.2:15848976-15848995 | None:intergenic | 20.0% |
| !! | GATATTCTCTTTATCAATTA+TGG | + | chr3.2:15848553-15848572 | None:intergenic | 20.0% |
| !! | TAAGAAAGGTAAAAGTAATA+GGG | + | chr3.2:15848975-15848994 | None:intergenic | 20.0% |
| !!! | GATAAGTTTTTAAGCTTTTA+AGG | + | chr3.2:15848876-15848895 | None:intergenic | 20.0% |
| !!! | TGAATGTAATTTTTGTTTTC+AGG | - | chr3.2:15849003-15849022 | MS.gene83830:intron | 20.0% |
| !!! | TTTTATAGCAAGGATAATTA+TGG | - | chr3.2:15847607-15847626 | MS.gene83830:CDS | 20.0% |
| ! | AAAAAAGTTTGTAAGATGAC+AGG | + | chr3.2:15848717-15848736 | None:intergenic | 25.0% |
| ! | AAAGTTGACAAAAAAAGAAG+TGG | + | chr3.2:15847984-15848003 | None:intergenic | 25.0% |
| ! | AAATAATAATCTGAGTTACC+TGG | + | chr3.2:15847721-15847740 | None:intergenic | 25.0% |
| ! | AATGTTCATTGGAATCAATT+GGG | + | chr3.2:15847940-15847959 | None:intergenic | 25.0% |
| ! | AATTATTTATCAGTGTCTAC+GGG | + | chr3.2:15847130-15847149 | None:intergenic | 25.0% |
| ! | ACAATGCATAATATATGCAA+AGG | + | chr3.2:15848481-15848500 | None:intergenic | 25.0% |
| ! | ATAAGATTCGATTCACAATT+TGG | - | chr3.2:15848115-15848134 | MS.gene83830:intron | 25.0% |
| ! | ATTAATTATATAGGCAGTAC+TGG | + | chr3.2:15848530-15848549 | None:intergenic | 25.0% |
| ! | GAAAGTAATTCTGTTAACTA+CGG | - | chr3.2:15849808-15849827 | MS.gene83830:intron | 25.0% |
| ! | TAGTTTATATCATCACATGA+AGG | + | chr3.2:15848672-15848691 | None:intergenic | 25.0% |
| ! | TATGGAAACAATGCAAATTA+TGG | - | chr3.2:15849343-15849362 | MS.gene83830:intron | 25.0% |
| ! | TGCTATGATAAATCCATATT+GGG | - | chr3.2:15847291-15847310 | MS.gene83830:CDS | 25.0% |
| ! | TGGGATTCATTATAGTTAAT+CGG | + | chr3.2:15847921-15847940 | None:intergenic | 25.0% |
| ! | TTAATTATATAGGCAGTACT+GGG | + | chr3.2:15848529-15848548 | None:intergenic | 25.0% |
| ! | TTAATTGGCATTTGTAACAA+CGG | - | chr3.2:15848755-15848774 | MS.gene83830:intron | 25.0% |
| ! | TTATTGTTCCTTCATTTGAT+AGG | - | chr3.2:15848601-15848620 | MS.gene83830:intron | 25.0% |
| !! | TCTCTAGTGTGTATTTATTT+TGG | - | chr3.2:15847860-15847879 | MS.gene83830:intron | 25.0% |
| !!! | ATCTCATTGTTTTTATAGCA+AGG | - | chr3.2:15847597-15847616 | MS.gene83830:CDS | 25.0% |
| AACAACGGACAATATTACTT+TGG | - | chr3.2:15848770-15848789 | MS.gene83830:intron | 30.0% | |
| ACAACGGACAATATTACTTT+GGG | - | chr3.2:15848771-15848790 | MS.gene83830:intron | 30.0% | |
| AGCATTTGTATATGTGTACA+TGG | + | chr3.2:15848184-15848203 | None:intergenic | 30.0% | |
| AGTGATAACCATTATAGTAC+CGG | - | chr3.2:15850054-15850073 | MS.gene83830:intron | 30.0% | |
| ATTCAAATTGAAGACGTGTT+TGG | + | chr3.2:15847219-15847238 | None:intergenic | 30.0% | |
| ATTCTATATCACACATGGTA+TGG | + | chr3.2:15848504-15848523 | None:intergenic | 30.0% | |
| ATTCTTATCTTATGCCCTAA+GGG | - | chr3.2:15848934-15848953 | MS.gene83830:intron | 30.0% | |
| ATTTCTTGTAAAACCACGAT+AGG | - | chr3.2:15847266-15847285 | MS.gene83830:CDS | 30.0% | |
| CAATGTTCATTGGAATCAAT+TGG | + | chr3.2:15847941-15847960 | None:intergenic | 30.0% | |
| CTGCTATGATAAATCCATAT+TGG | - | chr3.2:15847290-15847309 | MS.gene83830:CDS | 30.0% | |
| GAAAGCAATTCTGTTAACTA+TGG | - | chr3.2:15849901-15849920 | MS.gene83830:intron | 30.0% | |
| GGGATTCATTATAGTTAATC+GGG | + | chr3.2:15847920-15847939 | None:intergenic | 30.0% | |
| GTAAAAGCTCGACAATTATA+AGG | + | chr3.2:15848331-15848350 | None:intergenic | 30.0% | |
| TAAGCTTACACAATGTTCAT+TGG | + | chr3.2:15847951-15847970 | None:intergenic | 30.0% | |
| TACAAATGCTGAAACTACAT+AGG | - | chr3.2:15848194-15848213 | MS.gene83830:intron | 30.0% | |
| TATACATACGAGTTGTATCT+CGG | - | chr3.2:15847805-15847824 | MS.gene83830:CDS | 30.0% | |
| TATGGAAACACTTACAATGA+TGG | - | chr3.2:15849214-15849233 | MS.gene83830:intron | 30.0% | |
| TATGGTAACAATGTGAGTTA+TGG | - | chr3.2:15849691-15849710 | MS.gene83830:intron | 30.0% | |
| TGCTACTGTCAATATTAGTT+TGG | - | chr3.2:15848376-15848395 | MS.gene83830:intron | 30.0% | |
| TTGAACGTAACTATATGTGT+TGG | - | chr3.2:15847167-15847186 | MS.gene83830:CDS | 30.0% | |
| TTGAGAAACATATCGTGAAT+CGG | + | chr3.2:15848153-15848172 | None:intergenic | 30.0% | |
| ! | GCTACTGTCAATATTAGTTT+GGG | - | chr3.2:15848377-15848396 | MS.gene83830:intron | 30.0% |
| ! | TGTTACTTACAATACTGTTG+AGG | - | chr3.2:15847664-15847683 | MS.gene83830:CDS | 30.0% |
| ! | TGTTTTCTTTTTCCCTTCTA+GGG | - | chr3.2:15847503-15847522 | MS.gene83830:CDS | 30.0% |
| !! | CATGAAGGAACAATTTTAAC+TGG | + | chr3.2:15848657-15848676 | None:intergenic | 30.0% |
| !!! | AAGTTGATGCTTTTGCTAAA+CGG | - | chr3.2:15850253-15850272 | MS.gene83830:CDS | 30.0% |
| !!! | ATTATTTTTTTGGTAGTGGC+CGG | - | chr3.2:15848440-15848459 | MS.gene83830:intron | 30.0% |
| ACGTCTTCAATTTGAATTGC+CGG | - | chr3.2:15847222-15847241 | MS.gene83830:CDS | 35.0% | |
| ACTTATGTGTCTAATCATCC+AGG | - | chr3.2:15848349-15848368 | MS.gene83830:intron | 35.0% | |
| AGCTCACAAACTTCATTCAA+TGG | + | chr3.2:15848224-15848243 | None:intergenic | 35.0% | |
| AGTAACAAAGCCAAATCCTT+TGG | + | chr3.2:15847651-15847670 | None:intergenic | 35.0% | |
| ATAATATATGCAAAGGTCCG+GGG | + | chr3.2:15848474-15848493 | None:intergenic | 35.0% | |
| ATAATTATGGATCGCGAAAC+TGG | - | chr3.2:15847620-15847639 | MS.gene83830:CDS | 35.0% | |
| ATGCAAATTCATGTGTTTGC+AGG | - | chr3.2:15847394-15847413 | MS.gene83830:CDS | 35.0% | |
| ATGCCAAGATAGGATCTTTA+TGG | - | chr3.2:15847338-15847357 | MS.gene83830:CDS | 35.0% | |
| ATTGAAAAGGACCTTTGTTG+AGG | - | chr3.2:15847036-15847055 | MS.gene83830:CDS | 35.0% | |
| CAACCATAAAGATCCTATCT+TGG | + | chr3.2:15847344-15847363 | None:intergenic | 35.0% | |
| CATAATATATGCAAAGGTCC+GGG | + | chr3.2:15848475-15848494 | None:intergenic | 35.0% | |
| CTCGACAATTATAAGGACAA+GGG | + | chr3.2:15848324-15848343 | None:intergenic | 35.0% | |
| GAAAGCAATGCTGTTAACTA+TGG | - | chr3.2:15849298-15849317 | MS.gene83830:intron | 35.0% | |
| GATTCTTATCTTATGCCCTA+AGG | - | chr3.2:15848933-15848952 | MS.gene83830:intron | 35.0% | |
| GCATAATATATGCAAAGGTC+CGG | + | chr3.2:15848476-15848495 | None:intergenic | 35.0% | |
| GGGAAATTCTATATCACACA+TGG | + | chr3.2:15848509-15848528 | None:intergenic | 35.0% | |
| GGTGCTAACAATGCAAATTA+TGG | - | chr3.2:15849859-15849878 | MS.gene83830:intron | 35.0% | |
| GGTTATGGTAACTCTTCATA+CGG | - | chr3.2:15849127-15849146 | MS.gene83830:intron | 35.0% | |
| GTAGAGTTGGGAGTTTATTA+AGG | - | chr3.2:15846841-15846860 | MS.gene83830:CDS | 35.0% | |
| TAACAGTGCAAATTATGGTG+CGG | - | chr3.2:15849771-15849790 | MS.gene83830:intron | 35.0% | |
| TACTTACAATACTGTTGAGG+AGG | - | chr3.2:15847667-15847686 | MS.gene83830:CDS | 35.0% | |
| TGGCAAAATTTACACCAACT+CGG | + | chr3.2:15849042-15849061 | None:intergenic | 35.0% | |
| TGTACGTGTATGCAATCATT+CGG | + | chr3.2:15847767-15847786 | None:intergenic | 35.0% | |
| TTGAAAAGGACCTTTGTTGA+GGG | - | chr3.2:15847037-15847056 | MS.gene83830:CDS | 35.0% | |
| TTTCTTATCTTGTGCCCTTA+GGG | + | chr3.2:15848812-15848831 | None:intergenic | 35.0% | |
| ! | CTGTTTTCTTTTTCCCTTCT+AGG | - | chr3.2:15847502-15847521 | MS.gene83830:CDS | 35.0% |
| ! | GTTTTCTTTTTCCCTTCTAG+GGG | - | chr3.2:15847504-15847523 | MS.gene83830:CDS | 35.0% |
| ! | TTTTCTTTTTCCCTTCTAGG+GGG | - | chr3.2:15847505-15847524 | MS.gene83830:CDS | 35.0% |
| !! | AGTTGATGCTTTTGCTAAAC+GGG | - | chr3.2:15850254-15850273 | MS.gene83830:CDS | 35.0% |
| !! | GAAAGCATTGCTGTTAACTA+TGG | - | chr3.2:15849385-15849404 | MS.gene83830:intron | 35.0% |
| !!! | AATTTTAACTGGAGACCACA+TGG | + | chr3.2:15848646-15848665 | None:intergenic | 35.0% |
| !!! | AGCGATGCTTTTTCAAGATA+TGG | - | chr3.2:15847448-15847467 | MS.gene83830:CDS | 35.0% |
| !!! | TTTTGTTTTCAGGATCTGCA+TGG | - | chr3.2:15849013-15849032 | MS.gene83830:intron | 35.0% |
| AATAACAGCATGCAACGACA+AGG | + | chr3.2:15848586-15848605 | None:intergenic | 40.0% | |
| AATACCAAGCTGTTTGTAGG+AGG | - | chr3.2:15846954-15846973 | MS.gene83830:CDS | 40.0% | |
| AGATATGGCCAAGTTCTTGA+CGG | - | chr3.2:15847463-15847482 | MS.gene83830:CDS | 40.0% | |
| ATGGCTTTCTTTGGTAGAGT+TGG | - | chr3.2:15846828-15846847 | MS.gene83830:CDS | 40.0% | |
| CAGATGAGCCTATCAAATGA+AGG | + | chr3.2:15848612-15848631 | None:intergenic | 40.0% | |
| CCTACAAACAGCTTGGTATT+GGG | + | chr3.2:15846954-15846973 | None:intergenic | 40.0% | |
| GCTCGACAATTATAAGGACA+AGG | + | chr3.2:15848325-15848344 | None:intergenic | 40.0% | |
| GGTGGAAACGATGCAAATTA+TGG | - | chr3.2:15849256-15849275 | MS.gene83830:intron | 40.0% | |
| GGTGGTAACAGTGCAAATTA+TGG | - | chr3.2:15849766-15849785 | MS.gene83830:intron | 40.0% | |
| GTTTCTTATCTTGTGCCCTT+AGG | + | chr3.2:15848813-15848832 | None:intergenic | 40.0% | |
| TATGATAGAACTGGAGGACT+TGG | - | chr3.2:15850186-15850205 | MS.gene83830:CDS | 40.0% | |
| TATGGTAACTCTTCATACGG+TGG | - | chr3.2:15849130-15849149 | MS.gene83830:intron | 40.0% | |
| TATTGACAGTAGCAGTAACC+TGG | + | chr3.2:15848370-15848389 | None:intergenic | 40.0% | |
| TCCTACAAACAGCTTGGTAT+TGG | + | chr3.2:15846955-15846974 | None:intergenic | 40.0% | |
| TCTGTGAGAAGATATCCATG+TGG | - | chr3.2:15848628-15848647 | MS.gene83830:intron | 40.0% | |
| TGGCTTTCTTTGGTAGAGTT+GGG | - | chr3.2:15846829-15846848 | MS.gene83830:CDS | 40.0% | |
| TTATCATAGCAGACCTATCG+TGG | + | chr3.2:15847282-15847301 | None:intergenic | 40.0% | |
| TTTCCATAACCACCAACACT+AGG | + | chr3.2:15849418-15849437 | None:intergenic | 40.0% | |
| ! | AAATGCTAACTTGTGCCCTT+AGG | + | chr3.2:15848952-15848971 | None:intergenic | 40.0% |
| ! | AATGCTAACTTGTGCCCTTA+GGG | + | chr3.2:15848951-15848970 | None:intergenic | 40.0% |
| ! | CATCTGTTTTCCAAGCCATA+CGG | - | chr3.2:15846913-15846932 | MS.gene83830:CDS | 40.0% |
| ! | CATGACAGGGTTTAAAACAG+GGG | + | chr3.2:15847321-15847340 | None:intergenic | 40.0% |
| ! | GATAACCATTATAGTACCGG+TGG | - | chr3.2:15850057-15850076 | MS.gene83830:intron | 40.0% |
| ! | GCATGACAGGGTTTAAAACA+GGG | + | chr3.2:15847322-15847341 | None:intergenic | 40.0% |
| ! | GTATGGCTTGGAAAACAGAT+GGG | + | chr3.2:15846914-15846933 | None:intergenic | 40.0% |
| ! | TACAATGATGGAACTACCAG+TGG | - | chr3.2:15849226-15849245 | MS.gene83830:intron | 40.0% |
| ! | TATGGCTTGGAAAACAGATG+GGG | + | chr3.2:15846913-15846932 | None:intergenic | 40.0% |
| !! | ACTTCCAGGGTATTGATTAC+GGG | + | chr3.2:15850112-15850131 | None:intergenic | 40.0% |
| !! | CACTTCCAGGGTATTGATTA+CGG | + | chr3.2:15850113-15850132 | None:intergenic | 40.0% |
| !! | CTTGTTAACTTGTGCCCTAA+GGG | - | chr3.2:15848795-15848814 | MS.gene83830:intron | 40.0% |
| !! | TCTTGTTAACTTGTGCCCTA+AGG | - | chr3.2:15848794-15848813 | MS.gene83830:intron | 40.0% |
| !! | TTGAAGACGTGTTTGGTGTT+TGG | + | chr3.2:15847212-15847231 | None:intergenic | 40.0% |
| !! | TTTCTTTTTCCCTTCTAGGG+GGG | - | chr3.2:15847506-15847525 | MS.gene83830:CDS | 40.0% |
| AAACAGGGGCAAACCCAATA+TGG | + | chr3.2:15847307-15847326 | None:intergenic | 45.0% | |
| AAACCCTGTCATGCCAAGAT+AGG | - | chr3.2:15847328-15847347 | MS.gene83830:CDS | 45.0% | |
| AACAGTGCCAATTACAGTGG+TGG | - | chr3.2:15849958-15849977 | MS.gene83830:intron | 45.0% | |
| AAGGTCCATCAAAACCACCA+CGG | + | chr3.2:15849075-15849094 | None:intergenic | 45.0% | |
| ACAACTCACCGTCAAGAACT+TGG | + | chr3.2:15847474-15847493 | None:intergenic | 45.0% | |
| ACTACACAGCTATGTAGCAC+CGG | + | chr3.2:15847244-15847263 | None:intergenic | 45.0% | |
| ACTGGTAGGTCCAAAGGATT+TGG | - | chr3.2:15847638-15847657 | MS.gene83830:CDS | 45.0% | |
| ACTGTGAGAACCCTCAACAA+AGG | + | chr3.2:15847050-15847069 | None:intergenic | 45.0% | |
| AGAACTGGAGGACTTGGATA+CGG | - | chr3.2:15850192-15850211 | MS.gene83830:CDS | 45.0% | |
| AGATCCTATCTTGGCATGAC+AGG | + | chr3.2:15847335-15847354 | None:intergenic | 45.0% | |
| ATTACGGGAGAAACCATTGC+TGG | + | chr3.2:15850097-15850116 | None:intergenic | 45.0% | |
| CAACACCACCGGTACTATAA+TGG | + | chr3.2:15850065-15850084 | None:intergenic | 45.0% | |
| CCCAATACCAAGCTGTTTGT+AGG | - | chr3.2:15846951-15846970 | MS.gene83830:CDS | 45.0% | |
| GATCCTATCTTGGCATGACA+GGG | + | chr3.2:15847334-15847353 | None:intergenic | 45.0% | |
| GCAACACATTCACCAGACAT+TGG | - | chr3.2:15847098-15847117 | MS.gene83830:CDS | 45.0% | |
| GCTGCTGATACTGCTAACTA+TGG | - | chr3.2:15849715-15849734 | MS.gene83830:intron | 45.0% | |
| GCTTTCTCCACCACTGTAAT+TGG | + | chr3.2:15849968-15849987 | None:intergenic | 45.0% | |
| GGTAACAGTGCCAATTACAG+TGG | - | chr3.2:15849955-15849974 | MS.gene83830:intron | 45.0% | |
| GGTGGATATGATAGAACTGG+AGG | - | chr3.2:15850180-15850199 | MS.gene83830:CDS | 45.0% | |
| GGTGGATATTCAGGTGGTTA+TGG | - | chr3.2:15849112-15849131 | MS.gene83830:intron | 45.0% | |
| GTAACTCTTCATACGGTGGT+GGG | - | chr3.2:15849134-15849153 | MS.gene83830:intron | 45.0% | |
| GTTAACTATGGTAGTCCTCC+TGG | - | chr3.2:15849310-15849329 | MS.gene83830:intron | 45.0% | |
| TATACCCTGTTGCACTTCCA+GGG | + | chr3.2:15850125-15850144 | None:intergenic | 45.0% | |
| TTACGGGAGAAACCATTGCT+GGG | + | chr3.2:15850096-15850115 | None:intergenic | 45.0% | |
| TTATGGATCGCGAAACTGGT+AGG | - | chr3.2:15847624-15847643 | MS.gene83830:CDS | 45.0% | |
| TTCTCCCGTAATCAATACCC+TGG | - | chr3.2:15850105-15850124 | MS.gene83830:intron | 45.0% | |
| TTTCCATAACCACCAACACC+AGG | + | chr3.2:15849331-15849350 | None:intergenic | 45.0% | |
| ! | AATACCCTGGAAGTGCAACA+GGG | - | chr3.2:15850118-15850137 | MS.gene83830:intron | 45.0% |
| ! | AATGATGGAACTACCAGTGG+TGG | - | chr3.2:15849229-15849248 | MS.gene83830:intron | 45.0% |
| ! | CGTATGGCTTGGAAAACAGA+TGG | + | chr3.2:15846915-15846934 | None:intergenic | 45.0% |
| ! | GCTGGTGGATATGATAGAAC+TGG | - | chr3.2:15850177-15850196 | MS.gene83830:CDS | 45.0% |
| ! | GGCATGACAGGGTTTAAAAC+AGG | + | chr3.2:15847323-15847342 | None:intergenic | 45.0% |
| ! | GTTAACTATGGTAGTGCACC+TGG | - | chr3.2:15849913-15849932 | MS.gene83830:intron | 45.0% |
| ! | GTTAACTATGGTAGTGCTCC+TGG | - | chr3.2:15849397-15849416 | MS.gene83830:intron | 45.0% |
| ! | TATAGTGGTAATGCTGCTGG+AGG | - | chr3.2:15849175-15849194 | MS.gene83830:intron | 45.0% |
| ! | TATGGTAGTGCTCCTAGTGT+TGG | - | chr3.2:15849403-15849422 | MS.gene83830:intron | 45.0% |
| ! | TTTGATGGACCTTATGGTGG+TGG | - | chr3.2:15849082-15849101 | MS.gene83830:intron | 45.0% |
| !! | AATTATGGTGCTGCTGTAGG+CGG | - | chr3.2:15849271-15849290 | MS.gene83830:intron | 45.0% |
| !! | CATTATAGTACCGGTGGTGT+TGG | - | chr3.2:15850063-15850082 | MS.gene83830:intron | 45.0% |
| !! | GCAAATTATGGTGCTGCTGT+AGG | - | chr3.2:15849268-15849287 | MS.gene83830:intron | 45.0% |
| !! | GGTTTTGATGGACCTTATGG+TGG | - | chr3.2:15849079-15849098 | MS.gene83830:intron | 45.0% |
| !!! | GGTGGTTTTGATGGACCTTA+TGG | - | chr3.2:15849076-15849095 | MS.gene83830:intron | 45.0% |
| AATGCTGCTGGAGGTTATGG+CGG | - | chr3.2:15849184-15849203 | MS.gene83830:intron | 50.0% | |
| AATTATGGTGCGGCTGTAGG+TGG | - | chr3.2:15849781-15849800 | MS.gene83830:intron | 50.0% | |
| ACTACCAGTGGTGGTTATGG+TGG | - | chr3.2:15849238-15849257 | MS.gene83830:intron | 50.0% | |
| AGGTCCATCAAAACCACCAC+GGG | + | chr3.2:15849074-15849093 | None:intergenic | 50.0% | |
| AGTGCAACAGGGTATAGCAG+TGG | - | chr3.2:15850129-15850148 | MS.gene83830:intron | 50.0% | |
| CAACTGAATCCCCCCTAGAA+GGG | + | chr3.2:15847518-15847537 | None:intergenic | 50.0% | |
| CTATACCCTGTTGCACTTCC+AGG | + | chr3.2:15850126-15850145 | None:intergenic | 50.0% | |
| CTCACCTCCTACAAACAGCT+TGG | + | chr3.2:15846961-15846980 | None:intergenic | 50.0% | |
| GCAAATTATGGTGCGGCTGT+AGG | - | chr3.2:15849778-15849797 | MS.gene83830:intron | 50.0% | |
| GCTAACTATGGCAGTGCTTC+TGG | - | chr3.2:15849727-15849746 | MS.gene83830:intron | 50.0% | |
| GCTCCTGTTGCTGGTGTTTA+CGG | - | chr3.2:15849835-15849854 | MS.gene83830:intron | 50.0% | |
| GGAACTACCAGTGGTGGTTA+TGG | - | chr3.2:15849235-15849254 | MS.gene83830:intron | 50.0% | |
| GGACTTGGATACGGTGAAAG+TGG | - | chr3.2:15850201-15850220 | MS.gene83830:CDS | 50.0% | |
| GGTAACTCTTCATACGGTGG+TGG | - | chr3.2:15849133-15849152 | MS.gene83830:intron | 50.0% | |
| GGTAATGCTGCTGGAGGTTA+TGG | - | chr3.2:15849181-15849200 | MS.gene83830:intron | 50.0% | |
| GTCTGGTGAATGTGTTGCGT+CGG | + | chr3.2:15847096-15847115 | None:intergenic | 50.0% | |
| GTTTCCACCATAACCACCAC+TGG | + | chr3.2:15849245-15849264 | None:intergenic | 50.0% | |
| TATGGCAGTGCTTCTGGTGT+TGG | - | chr3.2:15849733-15849752 | MS.gene83830:intron | 50.0% | |
| TATGGTAGTCCTCCTGGTGT+TGG | - | chr3.2:15849316-15849335 | MS.gene83830:intron | 50.0% | |
| TCAACTGAATCCCCCCTAGA+AGG | + | chr3.2:15847519-15847538 | None:intergenic | 50.0% | |
| TTACCATAACCACCAACGCC+AGG | + | chr3.2:15849679-15849698 | None:intergenic | 50.0% | |
| TTTGCCAATGAAAGACCCCG+TGG | - | chr3.2:15849055-15849074 | MS.gene83830:intron | 50.0% | |
| ! | ATCAAGTGCCATTCAGGCCT+TGG | - | chr3.2:15847691-15847710 | MS.gene83830:CDS | 50.0% |
| ! | CAATACCCTGGAAGTGCAAC+AGG | - | chr3.2:15850117-15850136 | MS.gene83830:intron | 50.0% |
| ! | GGCTATAGTGGTAATGCTGC+TGG | - | chr3.2:15849172-15849191 | MS.gene83830:intron | 50.0% |
| ! | TATGGTAGTGCACCTGGTGT+TGG | - | chr3.2:15849919-15849938 | MS.gene83830:intron | 50.0% |
| ! | TATGGTAGTGCTCCTGGTGT+TGG | - | chr3.2:15850000-15850019 | MS.gene83830:intron | 50.0% |
| ! | TGGTGGGTATGGTAATGCTG+CGG | - | chr3.2:15849150-15849169 | MS.gene83830:intron | 50.0% |
| !! | ATAGTACCGGTGGTGTTGGT+GGG | - | chr3.2:15850067-15850086 | MS.gene83830:intron | 50.0% |
| !! | GCTCCTAGTGTTGGTGGTTA+TGG | - | chr3.2:15849412-15849431 | MS.gene83830:intron | 50.0% |
| !! | GCTTCTGGTGTTGGTGGTTA+TGG | - | chr3.2:15849742-15849761 | MS.gene83830:intron | 50.0% |
| !! | TACGGGTTAGTGCCAATGTC+TGG | + | chr3.2:15847113-15847132 | None:intergenic | 50.0% |
| !! | TATAGTACCGGTGGTGTTGG+TGG | - | chr3.2:15850066-15850085 | MS.gene83830:intron | 50.0% |
| !! | TATGGTGCTGCTGCTGGATT+TGG | - | chr3.2:15850027-15850046 | MS.gene83830:intron | 50.0% |
| !! | TCTGGTGTTGGTGGTTATGG+AGG | - | chr3.2:15849745-15849764 | MS.gene83830:intron | 50.0% |
| !! | TCTTCATACGGTGGTGGGTA+TGG | - | chr3.2:15849139-15849158 | MS.gene83830:intron | 50.0% |
| AAGGTCCGGGGTTCGAATTC+CGG | + | chr3.2:15848462-15848481 | None:intergenic | 55.0% | |
| ACCACCACGGGGTCTTTCAT+TGG | + | chr3.2:15849062-15849081 | None:intergenic | 55.0% | |
| CAAGCCATACGGTGCTTCTC+GGG | - | chr3.2:15846924-15846943 | MS.gene83830:CDS | 55.0% | |
| CCAAGCCATACGGTGCTTCT+CGG | - | chr3.2:15846923-15846942 | MS.gene83830:CDS | 55.0% | |
| CCACCATAACCACCAACACC+AGG | + | chr3.2:15849934-15849953 | None:intergenic | 55.0% | |
| CCACCGTAAACACCAGCAAC+AGG | + | chr3.2:15849841-15849860 | None:intergenic | 55.0% | |
| CCATAACCACCAACACCAGG+AGG | + | chr3.2:15849328-15849347 | None:intergenic | 55.0% | |
| CCTGTTGCTGGTGTTTACGG+TGG | - | chr3.2:15849838-15849857 | MS.gene83830:intron | 55.0% | |
| CGCGAAACTGGTAGGTCCAA+AGG | - | chr3.2:15847632-15847651 | MS.gene83830:CDS | 55.0% | |
| CTAGGGGGGATTCAGTTGAG+AGG | - | chr3.2:15847520-15847539 | MS.gene83830:CDS | 55.0% | |
| CTGAGTTACCTGGCCATCCA+AGG | + | chr3.2:15847711-15847730 | None:intergenic | 55.0% | |
| GCACCATAACCACCAACACC+AGG | + | chr3.2:15850015-15850034 | None:intergenic | 55.0% | |
| GGTCCATCAAAACCACCACG+GGG | + | chr3.2:15849073-15849092 | None:intergenic | 55.0% | |
| TACGGTAGTGCTCCTGTTGC+TGG | - | chr3.2:15849826-15849845 | MS.gene83830:intron | 55.0% | |
| ! | AGTGCCATTCAGGCCTTGGA+TGG | - | chr3.2:15847695-15847714 | MS.gene83830:CDS | 55.0% |
| ! | GGTAATGCTGCGGGCTATAG+TGG | - | chr3.2:15849160-15849179 | MS.gene83830:intron | 55.0% |
| ! | GGTAGTGCTCCTAGTGTTGG+TGG | - | chr3.2:15849406-15849425 | MS.gene83830:intron | 55.0% |
| ! | GGTGGGTATGGTAATGCTGC+GGG | - | chr3.2:15849151-15849170 | MS.gene83830:intron | 55.0% |
| ! | GGTTATGGCGGAGGTGGTTA+TGG | - | chr3.2:15849196-15849215 | MS.gene83830:intron | 55.0% |
| ! | TATGGTAGTGCTCCTGGCGT+TGG | - | chr3.2:15849664-15849683 | MS.gene83830:CDS | 55.0% |
| !! | AGTACCCGAGAAGCACCGTA+TGG | + | chr3.2:15846931-15846950 | None:intergenic | 55.0% |
| !! | CCTCCTGGTGTTGGTGGTTA+TGG | - | chr3.2:15849325-15849344 | MS.gene83830:intron | 55.0% |
| !! | CCTGGTGTTGGTGGTTATGG+TGG | - | chr3.2:15849328-15849347 | MS.gene83830:intron | 55.0% |
| !! | GATGGACCTTATGGTGGTGG+AGG | - | chr3.2:15849085-15849104 | MS.gene83830:intron | 55.0% |
| !! | GCACCTGGTGTTGGTGGTTA+TGG | - | chr3.2:15849928-15849947 | MS.gene83830:intron | 55.0% |
| !! | GCTCCTGGTGTTGGTGGTTA+TGG | - | chr3.2:15850009-15850028 | MS.gene83830:intron | 55.0% |
| !! | GGAGGCATCAAGTGCCATTC+AGG | - | chr3.2:15847685-15847704 | MS.gene83830:CDS | 55.0% |
| !! | GGAGGTGGTGGTGGATATTC+AGG | - | chr3.2:15849103-15849122 | MS.gene83830:intron | 55.0% |
| !! | GGTGGTGGTGGATATTCAGG+TGG | - | chr3.2:15849106-15849125 | MS.gene83830:intron | 55.0% |
| !! | GGTGTTGGTGGTTATGGAGG+TGG | - | chr3.2:15849748-15849767 | MS.gene83830:intron | 55.0% |
| !! | GGTGTTGGTGGTTATGGTGG+TGG | - | chr3.2:15849934-15849953 | MS.gene83830:intron | 55.0% |
| !! | TAGTACCGGTGGTGTTGGTG+GGG | - | chr3.2:15850068-15850087 | MS.gene83830:intron | 55.0% |
| !!! | AGACCCCGTGGTGGTTTTGA+TGG | - | chr3.2:15849067-15849086 | MS.gene83830:intron | 55.0% |
| AGCAGTGGCAGTTCAGCTCC+CGG | - | chr3.2:15850144-15850163 | MS.gene83830:CDS | 60.0% | |
| AGTGGCCGGAATTCGAACCC+CGG | - | chr3.2:15848454-15848473 | MS.gene83830:CDS | 60.0% | |
| CATTCAGGCCTTGGATGGCC+AGG | - | chr3.2:15847700-15847719 | MS.gene83830:CDS | 60.0% | |
| CCACCACCTCCACCACCATA+AGG | + | chr3.2:15849094-15849113 | None:intergenic | 60.0% | |
| CTGGCCATCCAAGGCCTGAA+TGG | + | chr3.2:15847702-15847721 | None:intergenic | 60.0% | |
| GATCTGCATGGTCGCCGAGT+TGG | - | chr3.2:15849025-15849044 | MS.gene83830:intron | 60.0% | |
| GCCAATGAAAGACCCCGTGG+TGG | - | chr3.2:15849058-15849077 | MS.gene83830:intron | 60.0% | |
| TATGGTGCGGCTGTAGGTGG+TGG | - | chr3.2:15849784-15849803 | MS.gene83830:intron | 60.0% | |
| TCCACCAGCAAAGCTGCTCC+CGG | + | chr3.2:15850166-15850185 | None:intergenic | 60.0% | |
| ! | GGCAGTGCTTCTGGTGTTGG+TGG | - | chr3.2:15849736-15849755 | MS.gene83830:intron | 60.0% |
| ! | GGTAGTCCTCCTGGTGTTGG+TGG | - | chr3.2:15849319-15849338 | MS.gene83830:intron | 60.0% |
| ! | GGTAGTGCACCTGGTGTTGG+TGG | - | chr3.2:15849922-15849941 | MS.gene83830:intron | 60.0% |
| ! | GGTAGTGCTCCTGGTGTTGG+TGG | - | chr3.2:15850003-15850022 | MS.gene83830:intron | 60.0% |
| !! | AGTACCGGTGGTGTTGGTGG+GGG | - | chr3.2:15850069-15850088 | MS.gene83830:intron | 60.0% |
| !! | CCGAGAAGCACCGTATGGCT+TGG | + | chr3.2:15846926-15846945 | None:intergenic | 60.0% |
| !! | CCTTATGGTGGTGGAGGTGG+TGG | - | chr3.2:15849091-15849110 | MS.gene83830:intron | 60.0% |
| !! | GCTCCTGGCGTTGGTGGTTA+TGG | - | chr3.2:15849673-15849692 | MS.gene83830:CDS | 60.0% |
| !! | GGACCTTATGGTGGTGGAGG+TGG | - | chr3.2:15849088-15849107 | MS.gene83830:intron | 60.0% |
| !! | GGTGGTTATGGTGCTGCTGC+TGG | - | chr3.2:15850021-15850040 | MS.gene83830:intron | 60.0% |
| !! | TATGGTGCTGCTGTAGGCGG+TGG | - | chr3.2:15849274-15849293 | MS.gene83830:intron | 60.0% |
| !! | TATGGTGGTGGAGGTGGTGG+TGG | - | chr3.2:15849094-15849113 | MS.gene83830:intron | 60.0% |
| CCACCAGCAAAGCTGCTCCC+GGG | + | chr3.2:15850165-15850184 | None:intergenic | 65.0% | |
| GCAGTGGCAGTTCAGCTCCC+GGG | - | chr3.2:15850145-15850164 | MS.gene83830:CDS | 65.0% | |
| GCTGCTGGAGGTTATGGCGG+AGG | - | chr3.2:15849187-15849206 | MS.gene83830:intron | 65.0% | |
| ! | GCTGGAGGTTATGGCGGAGG+TGG | - | chr3.2:15849190-15849209 | MS.gene83830:intron | 65.0% |
| ! | GGTAGTGCTCCTGGCGTTGG+TGG | - | chr3.2:15849667-15849686 | MS.gene83830:CDS | 65.0% |
| ! | GTTGGTGGGGGTCCCAGCAA+TGG | - | chr3.2:15850081-15850100 | MS.gene83830:intron | 65.0% |
| CCCGGGAGCAGCTTTGCTGG+TGG | - | chr3.2:15850162-15850181 | MS.gene83830:CDS | 70.0% | |
| GCTCCCGGGAGCAGCTTTGC+TGG | - | chr3.2:15850159-15850178 | MS.gene83830:CDS | 70.0% | |
| GGGACCCCCACCAACACCAC+CGG | + | chr3.2:15850076-15850095 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 15846828 | 15850281 | 15846828 | ID=MS.gene83830 |
| chr3.2 | mRNA | 15846828 | 15850281 | 15846828 | ID=MS.gene83830.t1;Parent=MS.gene83830 |
| chr3.2 | exon | 15850134 | 15850281 | 15850134 | ID=MS.gene83830.t1.exon1;Parent=MS.gene83830.t1 |
| chr3.2 | CDS | 15850134 | 15850281 | 15850134 | ID=cds.MS.gene83830.t1;Parent=MS.gene83830.t1 |
| chr3.2 | exon | 15849625 | 15849693 | 15849625 | ID=MS.gene83830.t1.exon2;Parent=MS.gene83830.t1 |
| chr3.2 | CDS | 15849625 | 15849693 | 15849625 | ID=cds.MS.gene83830.t1;Parent=MS.gene83830.t1 |
| chr3.2 | exon | 15848453 | 15848486 | 15848453 | ID=MS.gene83830.t1.exon3;Parent=MS.gene83830.t1 |
| chr3.2 | CDS | 15848453 | 15848486 | 15848453 | ID=cds.MS.gene83830.t1;Parent=MS.gene83830.t1 |
| chr3.2 | exon | 15846828 | 15847863 | 15846828 | ID=MS.gene83830.t1.exon4;Parent=MS.gene83830.t1 |
| chr3.2 | CDS | 15846828 | 15847863 | 15846828 | ID=cds.MS.gene83830.t1;Parent=MS.gene83830.t1 |
| Gene Sequence |
| Protein sequence |
