Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86783.t1 | XP_003599235.1 | 98.6 | 365 | 3 | 1 | 1 | 365 | 1 | 363 | 1.60E-206 | 728.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86783.t1 | Q8L4Y5 | 79.7 | 365 | 72 | 2 | 1 | 365 | 1 | 363 | 1.7e-172 | 606.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86783.t1 | G7IWS3 | 98.6 | 365 | 3 | 1 | 1 | 365 | 1 | 363 | 1.2e-206 | 728.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86783.t1 | MTR_3g030550 | 98.630 | 365 | 3 | 1 | 1 | 365 | 1 | 363 | 0.0 | 746 |
| MS.gene86783.t1 | MTR_2g008050 | 37.203 | 379 | 216 | 8 | 1 | 365 | 7 | 377 | 6.79e-71 | 226 |
| MS.gene86783.t1 | MTR_7g026230 | 37.895 | 380 | 212 | 8 | 1 | 365 | 7 | 377 | 1.32e-70 | 225 |
| MS.gene86783.t1 | MTR_3g095530 | 36.842 | 380 | 216 | 8 | 1 | 365 | 7 | 377 | 1.24e-68 | 220 |
| MS.gene86783.t1 | MTR_7g093260 | 37.105 | 380 | 215 | 8 | 1 | 365 | 7 | 377 | 1.35e-68 | 220 |
| MS.gene86783.t1 | MTR_6g004000 | 37.234 | 376 | 212 | 8 | 5 | 365 | 11 | 377 | 1.53e-68 | 220 |
| MS.gene86783.t1 | MTR_0015s0130 | 37.105 | 380 | 215 | 8 | 1 | 365 | 7 | 377 | 1.99e-68 | 220 |
| MS.gene86783.t1 | MTR_2g096840 | 36.842 | 380 | 216 | 8 | 1 | 365 | 7 | 377 | 6.89e-68 | 218 |
| MS.gene86783.t1 | MTR_7g027185 | 27.835 | 388 | 244 | 9 | 3 | 362 | 6 | 385 | 2.14e-41 | 149 |
| MS.gene86783.t1 | MTR_7g027185 | 29.936 | 314 | 203 | 5 | 3 | 301 | 6 | 317 | 9.53e-41 | 147 |
| MS.gene86783.t1 | MTR_7g027185 | 29.677 | 310 | 201 | 5 | 3 | 297 | 6 | 313 | 1.68e-39 | 142 |
| MS.gene86783.t1 | MTR_5g066400 | 26.185 | 443 | 243 | 11 | 1 | 364 | 7 | 444 | 8.14e-37 | 138 |
| MS.gene86783.t1 | MTR_5g066400 | 25.282 | 443 | 219 | 12 | 1 | 364 | 7 | 416 | 6.55e-32 | 124 |
| MS.gene86783.t1 | MTR_8g464900 | 25.641 | 429 | 234 | 12 | 1 | 350 | 7 | 429 | 1.78e-30 | 120 |
| MS.gene86783.t1 | MTR_5g066400 | 25.263 | 380 | 206 | 9 | 1 | 303 | 7 | 385 | 1.68e-27 | 112 |
| MS.gene86783.t1 | MTR_8g007440 | 27.391 | 230 | 148 | 3 | 93 | 303 | 38 | 267 | 4.73e-25 | 103 |
| MS.gene86783.t1 | MTR_8g089630 | 25.728 | 412 | 248 | 13 | 3 | 359 | 9 | 417 | 6.58e-25 | 105 |
| MS.gene86783.t1 | MTR_2g445210 | 24.074 | 432 | 238 | 13 | 2 | 354 | 6 | 426 | 3.07e-20 | 92.0 |
| MS.gene86783.t1 | MTR_3g010170 | 26.241 | 282 | 180 | 11 | 92 | 355 | 193 | 464 | 5.93e-18 | 85.5 |
| MS.gene86783.t1 | MTR_8g070520 | 26.119 | 268 | 173 | 9 | 92 | 344 | 201 | 458 | 6.59e-17 | 82.0 |
| MS.gene86783.t1 | MTR_2g445210 | 22.581 | 372 | 211 | 9 | 2 | 298 | 6 | 375 | 1.35e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86783.t1 | AT3G60830 | 79.726 | 365 | 72 | 2 | 1 | 365 | 1 | 363 | 0.0 | 622 |
| MS.gene86783.t1 | AT3G12110 | 37.995 | 379 | 213 | 8 | 1 | 365 | 7 | 377 | 2.98e-69 | 222 |
| MS.gene86783.t1 | AT5G09810 | 36.842 | 380 | 216 | 8 | 1 | 365 | 7 | 377 | 1.15e-68 | 220 |
| MS.gene86783.t1 | AT1G49240 | 36.842 | 380 | 216 | 8 | 1 | 365 | 7 | 377 | 2.99e-68 | 219 |
| MS.gene86783.t1 | AT3G18780 | 36.842 | 380 | 216 | 8 | 1 | 365 | 7 | 377 | 3.09e-68 | 219 |
| MS.gene86783.t1 | AT3G18780 | 36.842 | 380 | 216 | 8 | 1 | 365 | 7 | 377 | 3.09e-68 | 219 |
| MS.gene86783.t1 | AT5G59370 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 5.17e-68 | 219 |
| MS.gene86783.t1 | AT5G59370 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 5.17e-68 | 219 |
| MS.gene86783.t1 | AT3G46520 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 5.17e-68 | 219 |
| MS.gene86783.t1 | AT3G46520 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 5.17e-68 | 219 |
| MS.gene86783.t1 | AT3G53750 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 7.06e-68 | 218 |
| MS.gene86783.t1 | AT3G53750 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 7.06e-68 | 218 |
| MS.gene86783.t1 | AT2G37620 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 7.06e-68 | 218 |
| MS.gene86783.t1 | AT2G37620 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 7.06e-68 | 218 |
| MS.gene86783.t1 | AT2G37620 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 7.06e-68 | 218 |
| MS.gene86783.t1 | AT2G37620 | 37.368 | 380 | 214 | 8 | 1 | 365 | 7 | 377 | 7.06e-68 | 218 |
| MS.gene86783.t1 | AT2G42170 | 39.550 | 311 | 177 | 6 | 58 | 365 | 27 | 329 | 5.78e-66 | 212 |
| MS.gene86783.t1 | AT2G42170 | 39.550 | 311 | 177 | 6 | 58 | 365 | 27 | 329 | 5.78e-66 | 212 |
| MS.gene86783.t1 | AT2G42100 | 36.870 | 377 | 216 | 10 | 3 | 365 | 10 | 378 | 3.60e-63 | 206 |
| MS.gene86783.t1 | AT2G42090 | 34.309 | 376 | 224 | 9 | 1 | 364 | 1 | 365 | 5.16e-62 | 203 |
| MS.gene86783.t1 | AT3G18780 | 35.311 | 354 | 205 | 8 | 1 | 339 | 7 | 351 | 7.11e-56 | 187 |
| MS.gene86783.t1 | AT2G42170 | 38.246 | 285 | 165 | 6 | 58 | 339 | 27 | 303 | 8.45e-54 | 180 |
| MS.gene86783.t1 | AT2G42170 | 38.246 | 285 | 165 | 6 | 58 | 339 | 27 | 303 | 8.45e-54 | 180 |
| MS.gene86783.t1 | AT2G42170 | 39.565 | 230 | 129 | 5 | 139 | 365 | 9 | 231 | 2.89e-44 | 152 |
| MS.gene86783.t1 | AT3G27000 | 27.621 | 391 | 241 | 11 | 3 | 362 | 6 | 385 | 2.44e-41 | 149 |
| MS.gene86783.t1 | AT1G18450 | 26.376 | 436 | 243 | 11 | 3 | 364 | 9 | 440 | 1.18e-36 | 138 |
| MS.gene86783.t1 | AT1G13180 | 23.923 | 418 | 248 | 12 | 3 | 359 | 8 | 416 | 1.66e-22 | 98.6 |
| MS.gene86783.t1 | AT5G56180 | 27.305 | 282 | 176 | 11 | 92 | 355 | 64 | 334 | 6.40e-20 | 90.1 |
| MS.gene86783.t1 | AT5G56180 | 27.305 | 282 | 176 | 11 | 92 | 355 | 196 | 466 | 1.13e-19 | 90.5 |
| MS.gene86783.t1 | AT5G56180 | 31.868 | 182 | 110 | 6 | 92 | 263 | 196 | 373 | 6.15e-16 | 79.0 |
Find 98 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCCTTCAGAAGCATTTC+CGG | 0.196619 | 3.4:+23862039 | None:intergenic |
| TTTGAAACGTTCAACATATC+AGG | 0.207624 | 3.4:-23865714 | MS.gene86783:CDS |
| TGATAATCATCGGCAACTTC+TGG | 0.284765 | 3.4:-23863287 | MS.gene86783:CDS |
| TTATTCCAGCCAAGTCTCTT+GGG | 0.329602 | 3.4:-23863367 | MS.gene86783:CDS |
| CAAAGCCGGATTTGCAATTC+CGG | 0.340012 | 3.4:-23867220 | MS.gene86783:CDS |
| TTAACAGCACCCTCAATTAC+TGG | 0.348733 | 3.4:+23864178 | None:intergenic |
| CGGTGGTAAGAGGTTATGTT+AGG | 0.350541 | 3.4:-23866984 | MS.gene86783:CDS |
| TATGCTGTGGGAAGGATCTC+TGG | 0.352207 | 3.4:-23865657 | MS.gene86783:CDS |
| AGTGGACTTGGATGGGAAAT+TGG | 0.354267 | 3.4:-23866919 | MS.gene86783:CDS |
| TACTGATCTAACTAATTTCC+TGG | 0.365442 | 3.4:-23864122 | MS.gene86783:CDS |
| TGAGGGACAAATATTGTTTA+CGG | 0.387216 | 3.4:-23866893 | MS.gene86783:CDS |
| GCCTCAAGAAGATTTGAGTT+TGG | 0.387231 | 3.4:-23864148 | MS.gene86783:CDS |
| AAGAGGTTATGTTAGGGATT+GGG | 0.396290 | 3.4:-23866977 | MS.gene86783:CDS |
| TAAGAGGTTATGTTAGGGAT+TGG | 0.397109 | 3.4:-23866978 | MS.gene86783:CDS |
| CTTGGGCAGGTGATAACAAT+TGG | 0.400113 | 3.4:-23863418 | MS.gene86783:intron |
| TTTATTCCAGCCAAGTCTCT+TGG | 0.416155 | 3.4:-23863368 | MS.gene86783:CDS |
| TTGATCCGGAATTGCAAATC+CGG | 0.426116 | 3.4:+23867215 | None:intergenic |
| TGTTAGGGATTGGGATGCTA+TGG | 0.432696 | 3.4:-23866968 | MS.gene86783:CDS |
| GTTGATGAAACGAATGATAA+TGG | 0.435371 | 3.4:-23867051 | MS.gene86783:CDS |
| TGTTCGACCTACCTTGGTTA+AGG | 0.442095 | 3.4:-23862585 | MS.gene86783:intron |
| AATTTCCTGGCTCAAGAACT+TGG | 0.442992 | 3.4:-23864109 | MS.gene86783:CDS |
| AAAAGGCAGACCTGTCCATC+AGG | 0.453464 | 3.4:+23863953 | None:intergenic |
| CTGGAAAATACTGTAGTTTG+TGG | 0.463801 | 3.4:-23863268 | MS.gene86783:CDS |
| AAATAATAATTTACCAGTCA+TGG | 0.466360 | 3.4:+23863234 | None:intergenic |
| AAGGCAGACTATGACGAAAA+CGG | 0.467479 | 3.4:-23862077 | MS.gene86783:CDS |
| GGATGATGTCGCGGTTGAAC+CGG | 0.469154 | 3.4:-23867004 | MS.gene86783:CDS |
| GCTGATATTCACTAGTGGAT+TGG | 0.469625 | 3.4:+23864081 | None:intergenic |
| AATGATAATGGTAACGGTAA+TGG | 0.476579 | 3.4:-23867039 | MS.gene86783:CDS |
| TCAAAATCAGCATGTAACTA+AGG | 0.477345 | 3.4:-23862096 | MS.gene86783:CDS |
| ATCTGCTGTTCGACCTACCT+TGG | 0.485020 | 3.4:-23862591 | MS.gene86783:CDS |
| ACCATGGCGGGAGTTTGATC+CGG | 0.485110 | 3.4:+23867201 | None:intergenic |
| GAATTGCAAATCCGGCTTTG+AGG | 0.489124 | 3.4:+23867223 | None:intergenic |
| AGGCAGACTATGACGAAAAC+GGG | 0.494080 | 3.4:-23862076 | MS.gene86783:CDS |
| ATTTGCCAAGTTCTTGAGCC+AGG | 0.496785 | 3.4:+23864104 | None:intergenic |
| GTCGATTACTGCGGCTTCCA+TGG | 0.498127 | 3.4:+23867260 | None:intergenic |
| AGATATTGCTCCAGTAATTG+AGG | 0.498422 | 3.4:-23864188 | MS.gene86783:CDS |
| GGTTCCAGCCTCCTCAAAGC+CGG | 0.509745 | 3.4:-23867234 | MS.gene86783:CDS |
| GTCTCTAACCCCAAGAGACT+TGG | 0.509904 | 3.4:+23863358 | None:intergenic |
| ATTTAACCATGTATTCTGCA+TGG | 0.510134 | 3.4:-23862154 | MS.gene86783:CDS |
| GGCGGCACTTCTTCCATGAC+TGG | 0.515220 | 3.4:-23863247 | MS.gene86783:intron |
| TCAAGAAGATTTGAGTTTGG+AGG | 0.518524 | 3.4:-23864145 | MS.gene86783:CDS |
| AACCATGTATTCTGCATGGG+TGG | 0.523729 | 3.4:-23862150 | MS.gene86783:CDS |
| ACATACCCTTCCTGATGGAC+AGG | 0.524637 | 3.4:-23863963 | MS.gene86783:intron |
| TTTAACCATGTATTCTGCAT+GGG | 0.529048 | 3.4:-23862153 | MS.gene86783:CDS |
| TATTCCAGCCAAGTCTCTTG+GGG | 0.531624 | 3.4:-23863366 | MS.gene86783:CDS |
| CGGTAATGGTCAGTTGGTGG+TGG | 0.533767 | 3.4:-23867025 | MS.gene86783:CDS |
| TAGGGATTGGGATGCTATGG+AGG | 0.535223 | 3.4:-23866965 | MS.gene86783:CDS |
| TGGATGGGAAATTGGTAATG+AGG | 0.541437 | 3.4:-23866911 | MS.gene86783:CDS |
| TCCCACCCATGCAGAATACA+TGG | 0.542048 | 3.4:+23862148 | None:intergenic |
| TTGAAACGTTCAACATATCA+GGG | 0.546440 | 3.4:-23865713 | MS.gene86783:CDS |
| GCGGTTGAACCGGTGGTAAG+AGG | 0.550956 | 3.4:-23866994 | MS.gene86783:CDS |
| ACGGGCCTTCCATTGTTCAC+CGG | 0.552276 | 3.4:-23862058 | MS.gene86783:CDS |
| GATATTGCTCCAGTAATTGA+GGG | 0.556906 | 3.4:-23864187 | MS.gene86783:CDS |
| CATTTCCGGTGAACAATGGA+AGG | 0.561251 | 3.4:+23862053 | None:intergenic |
| GGTGGTAAGAGGTTATGTTA+GGG | 0.561762 | 3.4:-23866983 | MS.gene86783:CDS |
| TTCACCGGAAATGCTTCTGA+AGG | 0.563105 | 3.4:-23862043 | None:intergenic |
| AAATCCGGCTTTGAGGAGGC+TGG | 0.564191 | 3.4:+23867230 | None:intergenic |
| ACCATGTATTCTGCATGGGT+GGG | 0.564824 | 3.4:-23862149 | MS.gene86783:CDS |
| CTAACCCCAAGAGACTTGGC+TGG | 0.564883 | 3.4:+23863362 | None:intergenic |
| AATACCTTTGGGGTACAAAG+TGG | 0.572233 | 3.4:+23866868 | None:intergenic |
| GAAGCATTTCCGGTGAACAA+TGG | 0.576275 | 3.4:+23862049 | None:intergenic |
| GGATGGGAAATTGGTAATGA+GGG | 0.577369 | 3.4:-23866910 | MS.gene86783:CDS |
| ATGTCACGGTTGAAATAGTA+CGG | 0.582136 | 3.4:+23863311 | None:intergenic |
| CTCTTGGGGTTAGAGACTCA+TGG | 0.582241 | 3.4:-23863352 | MS.gene86783:CDS |
| CCGTGACATCTGATAATCAT+CGG | 0.585129 | 3.4:-23863297 | MS.gene86783:CDS |
| GGAAGAGAAAGATATACAGT+TGG | 0.586903 | 3.4:-23863397 | MS.gene86783:CDS |
| GACAGAAAACTCTTGTCCTG+TGG | 0.587399 | 3.4:-23863990 | MS.gene86783:CDS |
| CTTCAAATCAAATACCTTTG+GGG | 0.589205 | 3.4:+23866858 | None:intergenic |
| TTTGTACAGTGGACTTGGAT+GGG | 0.590015 | 3.4:-23866926 | MS.gene86783:CDS |
| GAGACACATACCCTTCCTGA+TGG | 0.590973 | 3.4:-23863968 | MS.gene86783:CDS |
| GGCAGACCTGTCCATCAGGA+AGG | 0.597367 | 3.4:+23863957 | None:intergenic |
| CCGATGATTATCAGATGTCA+CGG | 0.598353 | 3.4:+23863297 | None:intergenic |
| TTGCAAATCCGGCTTTGAGG+AGG | 0.598400 | 3.4:+23867226 | None:intergenic |
| TAACGGTAATGGTCAGTTGG+TGG | 0.598753 | 3.4:-23867028 | MS.gene86783:CDS |
| TATCACTCTATGCTGTGGGA+AGG | 0.598809 | 3.4:-23865665 | MS.gene86783:CDS |
| TCTGGATGCACAGTTGACAT+TGG | 0.600543 | 3.4:-23865639 | MS.gene86783:CDS |
| GAAACGAATGATAATGGTAA+CGG | 0.601469 | 3.4:-23867045 | MS.gene86783:CDS |
| TGCACAGTTGACATTGGTCA+TGG | 0.603154 | 3.4:-23865633 | MS.gene86783:CDS |
| CAAATTACCTTAACCAAGGT+AGG | 0.604467 | 3.4:+23862578 | None:intergenic |
| TGGTAACGGTAATGGTCAGT+TGG | 0.605363 | 3.4:-23867031 | MS.gene86783:CDS |
| CAAATCTTCTTGAGGCAATG+TGG | 0.606494 | 3.4:+23864155 | None:intergenic |
| GGAAGGGTATGTGTCTCCAC+AGG | 0.609074 | 3.4:+23863974 | None:intergenic |
| TCCAAACTCAAATCTTCTTG+AGG | 0.609668 | 3.4:+23864147 | None:intergenic |
| TCCGGATCAAACTCCCGCCA+TGG | 0.609858 | 3.4:-23867202 | MS.gene86783:intron |
| TCCTAGTCAGATGAAACGAA+TGG | 0.618467 | 3.4:-23867073 | MS.gene86783:CDS |
| GACATGCTGATATTCACTAG+TGG | 0.627981 | 3.4:+23864076 | None:intergenic |
| TGATGTCGCGGTTGAACCGG+TGG | 0.629697 | 3.4:-23867001 | MS.gene86783:CDS |
| ATGTATTCTGCATGGGTGGG+AGG | 0.631210 | 3.4:-23862146 | MS.gene86783:CDS |
| TGATAAAACTGCCTGTTCCG+AGG | 0.631931 | 3.4:+23865683 | None:intergenic |
| ACCATTCGTTTCATCTGACT+AGG | 0.632362 | 3.4:+23867072 | None:intergenic |
| CTAACATAACCTCTTACCAC+CGG | 0.634552 | 3.4:+23866985 | None:intergenic |
| GGATCCACTTTGTACCCCAA+AGG | 0.635293 | 3.4:-23866872 | MS.gene86783:intron |
| GCAGACCTGTCCATCAGGAA+GGG | 0.640745 | 3.4:+23863958 | None:intergenic |
| GAAAATACTGTAGTTTGTGG+CGG | 0.660031 | 3.4:-23863265 | MS.gene86783:CDS |
| GTTGGTGGTGGATGATGTCG+CGG | 0.669252 | 3.4:-23867013 | MS.gene86783:CDS |
| CGAACAAATTACCTTAACCA+AGG | 0.677009 | 3.4:+23862574 | None:intergenic |
| GAAGCCGCAGTAATCGACGC+TGG | 0.683303 | 3.4:-23867255 | MS.gene86783:CDS |
| GGAACCAGCGTCGATTACTG+CGG | 0.715989 | 3.4:+23867251 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTAAATACAAAAAAGA+AGG | + | chr3.4:23866098-23866117 | None:intergenic | 10.0% |
| !! | TTTAAATTATATGTAATCTA+CGG | + | chr3.4:23863980-23863999 | None:intergenic | 10.0% |
| !!! | TATTTATATTTAGTTTCATA+TGG | - | chr3.4:23866479-23866498 | MS.gene86783:intron | 10.0% |
| !! | AAATGATATCAAAATTATCT+AGG | + | chr3.4:23863336-23863355 | None:intergenic | 15.0% |
| !! | AATATTATAAGATTGAACAA+TGG | + | chr3.4:23866931-23866950 | None:intergenic | 15.0% |
| !! | ACATACTAATAATTACAATT+GGG | - | chr3.4:23864954-23864973 | MS.gene86783:intron | 15.0% |
| !! | ATATTTCAATATTTATAGAC+AGG | + | chr3.4:23863101-23863120 | None:intergenic | 15.0% |
| !! | ATTAAATTGAAGATTACTTA+TGG | - | chr3.4:23865606-23865625 | MS.gene86783:intron | 15.0% |
| !! | GTTAATGTAATTGAATTAAA+TGG | - | chr3.4:23863915-23863934 | MS.gene86783:intron | 15.0% |
| !! | TACATACTAATAATTACAAT+TGG | - | chr3.4:23864953-23864972 | MS.gene86783:intron | 15.0% |
| !! | TATATGGAAGTAATTTAATA+TGG | - | chr3.4:23865648-23865667 | MS.gene86783:CDS | 15.0% |
| !! | TTTATGAATAAGTATTTAAG+TGG | - | chr3.4:23863746-23863765 | MS.gene86783:intron | 15.0% |
| !!! | AACAATTGATATTTTTGAAA+TGG | - | chr3.4:23864203-23864222 | MS.gene86783:intron | 15.0% |
| !!! | AATACATATTTTTTGTTTCA+TGG | - | chr3.4:23864648-23864667 | MS.gene86783:intron | 15.0% |
| !!! | CAATTTTCTCAAATTATTAT+CGG | + | chr3.4:23862634-23862653 | None:intergenic | 15.0% |
| !!! | GCATTTAAATTTTTACAAAA+TGG | - | chr3.4:23866140-23866159 | MS.gene86783:intron | 15.0% |
| !!! | TATTTATATTACTTTTTTCC+AGG | - | chr3.4:23863538-23863557 | MS.gene86783:intron | 15.0% |
| !!! | TTAATTTAGTGTTTTTGAAA+CGG | - | chr3.4:23862491-23862510 | MS.gene86783:intron | 15.0% |
| !!! | TTATTGGTTATGATTTATTA+TGG | - | chr3.4:23865384-23865403 | MS.gene86783:intron | 15.0% |
| !!! | TTTTAAATTGCTATATGATA+TGG | - | chr3.4:23866200-23866219 | MS.gene86783:intron | 15.0% |
| !!! | TTTTCCTTGAAAATTAAATT+GGG | - | chr3.4:23863436-23863455 | MS.gene86783:intron | 15.0% |
| !!! | TTTTTCCTTGAAAATTAAAT+TGG | - | chr3.4:23863435-23863454 | MS.gene86783:intron | 15.0% |
| !! | AAAATGCAGAAATAAAACAA+TGG | + | chr3.4:23866625-23866644 | None:intergenic | 20.0% |
| !! | AAATAATAATTTACCAGTCA+TGG | + | chr3.4:23866073-23866092 | None:intergenic | 20.0% |
| !! | AAATCTATCTCTTCTTTATA+TGG | - | chr3.4:23865632-23865651 | MS.gene86783:CDS | 20.0% |
| !! | AATGAAAATTGAGAATTGAA+AGG | + | chr3.4:23862140-23862159 | None:intergenic | 20.0% |
| !! | AGAATATACAAGAGATAAAT+GGG | - | chr3.4:23864698-23864717 | MS.gene86783:intron | 20.0% |
| !! | ATAACTAATATGATAAGAGT+TGG | - | chr3.4:23863873-23863892 | MS.gene86783:intron | 20.0% |
| !! | ATGAAAATTGAGAATTGAAA+GGG | + | chr3.4:23862139-23862158 | None:intergenic | 20.0% |
| !! | TCTCAGTTAATATAAGTTAA+TGG | - | chr3.4:23866790-23866809 | MS.gene86783:intron | 20.0% |
| !! | TGTTACATATGTAATTAACT+TGG | - | chr3.4:23864153-23864172 | MS.gene86783:CDS | 20.0% |
| !! | TTTCCTTGAAAATTAAATTG+GGG | - | chr3.4:23863437-23863456 | MS.gene86783:intron | 20.0% |
| !!! | ACAATTTTTGTAGTAGTTTA+TGG | - | chr3.4:23866839-23866858 | MS.gene86783:intron | 20.0% |
| !!! | GAAATTTTAAATCATAGCAA+TGG | + | chr3.4:23864545-23864564 | None:intergenic | 20.0% |
| !!! | TATCTATATTTGAAGCAATA+GGG | - | chr3.4:23863703-23863722 | MS.gene86783:intron | 20.0% |
| !!! | TATGATTTAAAATTTCCACA+TGG | - | chr3.4:23864549-23864568 | MS.gene86783:intron | 20.0% |
| !!! | TTTAGTTCATAAAGATTTGA+CGG | - | chr3.4:23865692-23865711 | MS.gene86783:CDS | 20.0% |
| !!! | TTTAGTTTCATATGGAATTT+AGG | - | chr3.4:23866487-23866506 | MS.gene86783:intron | 20.0% |
| !!! | TTTTGATGTTTTTGTTTTGT+GGG | - | chr3.4:23862198-23862217 | MS.gene86783:intron | 20.0% |
| !!! | TTTTTGATGTTTTTGTTTTG+TGG | - | chr3.4:23862197-23862216 | MS.gene86783:intron | 20.0% |
| ! | AAAAACTACTTTAGCAAGTA+TGG | + | chr3.4:23867186-23867205 | None:intergenic | 25.0% |
| ! | AGAAGTAACATGATTATGTT+CGG | + | chr3.4:23863073-23863092 | None:intergenic | 25.0% |
| ! | AGGATCATCATAATAAAGTA+TGG | + | chr3.4:23863316-23863335 | None:intergenic | 25.0% |
| ! | ATAATAAAGTATGGTAACCA+AGG | + | chr3.4:23863307-23863326 | None:intergenic | 25.0% |
| ! | ATAATCGTGAAAATTAACAC+TGG | - | chr3.4:23865480-23865499 | MS.gene86783:intron | 25.0% |
| ! | ATGTTTATGTCTACTGTTTA+TGG | - | chr3.4:23863379-23863398 | MS.gene86783:CDS | 25.0% |
| ! | ATTTAATGTCTGCTATGATA+TGG | + | chr3.4:23862796-23862815 | None:intergenic | 25.0% |
| ! | ATTTACTACCTTGTGAATTT+CGG | + | chr3.4:23864332-23864351 | None:intergenic | 25.0% |
| ! | CAAAGTTAATCTGTATTAGA+AGG | - | chr3.4:23866308-23866327 | MS.gene86783:intron | 25.0% |
| ! | CAGAATATACAAGAGATAAA+TGG | - | chr3.4:23864697-23864716 | MS.gene86783:intron | 25.0% |
| ! | CCAATAAAAGATGAATCAAA+AGG | + | chr3.4:23865371-23865390 | None:intergenic | 25.0% |
| ! | CTGTGTAACTTTATCTTATT+TGG | - | chr3.4:23865082-23865101 | MS.gene86783:intron | 25.0% |
| ! | TACATGAAATCAATAACCTA+CGG | + | chr3.4:23865808-23865827 | None:intergenic | 25.0% |
| ! | TATGTCTCATAATAGACATT+CGG | + | chr3.4:23864913-23864932 | None:intergenic | 25.0% |
| ! | TCTTCAAATCAAATACCTTT+GGG | + | chr3.4:23862450-23862469 | None:intergenic | 25.0% |
| ! | TGAAAATTGAGAATTGAAAG+GGG | + | chr3.4:23862138-23862157 | None:intergenic | 25.0% |
| ! | TGTCATATGCTTCAAATTTA+AGG | - | chr3.4:23862977-23862996 | MS.gene86783:intron | 25.0% |
| ! | TGTTTATGTCTACTGTTTAT+GGG | - | chr3.4:23863380-23863399 | MS.gene86783:CDS | 25.0% |
| ! | TTAGTTCATAAAGATTTGAC+GGG | - | chr3.4:23865693-23865712 | MS.gene86783:CDS | 25.0% |
| ! | TTCCTTGAAAATTAAATTGG+GGG | - | chr3.4:23863438-23863457 | MS.gene86783:intron | 25.0% |
| ! | TTTGTTTGATTAATTTCCGT+AGG | - | chr3.4:23865789-23865808 | MS.gene86783:intron | 25.0% |
| !! | AAAAGTTAGTGTTATTGTTG+TGG | - | chr3.4:23864227-23864246 | MS.gene86783:intron | 25.0% |
| !! | AATTGGGCGTAATTTAATTT+GGG | - | chr3.4:23864970-23864989 | MS.gene86783:intron | 25.0% |
| !! | GAATACATGGTTAAATTTTC+AGG | + | chr3.4:23867146-23867165 | None:intergenic | 25.0% |
| !! | GTATCTATATTTGAAGCAAT+AGG | - | chr3.4:23863702-23863721 | MS.gene86783:intron | 25.0% |
| !! | TATACTGATATCTAAAGTTG+AGG | + | chr3.4:23864006-23864025 | None:intergenic | 25.0% |
| !! | TGCTTTGATGAGATTATTTT+GGG | - | chr3.4:23862948-23862967 | MS.gene86783:intron | 25.0% |
| !! | TTGAATTATGTTTTGTACAG+TGG | - | chr3.4:23862367-23862386 | MS.gene86783:intron | 25.0% |
| !! | TTTGTGTATGTTTTCTTCTT+AGG | - | chr3.4:23863355-23863374 | MS.gene86783:CDS | 25.0% |
| !!! | AAATTTTCAGGCATATATTC+TGG | + | chr3.4:23867134-23867153 | None:intergenic | 25.0% |
| !!! | AGTTAATGGTTTTTTCACTT+AGG | - | chr3.4:23866804-23866823 | MS.gene86783:intron | 25.0% |
| !!! | CCTTTTGATTCATCTTTTAT+TGG | - | chr3.4:23865368-23865387 | MS.gene86783:intron | 25.0% |
| !!! | CTGAAATGTTACATTTTGAT+AGG | + | chr3.4:23866265-23866284 | None:intergenic | 25.0% |
| !!! | TCAAGTTGGAAATAGTTTAA+AGG | - | chr3.4:23864427-23864446 | MS.gene86783:intron | 25.0% |
| !!! | TGACATTTTCTAGGATTAAA+CGG | - | chr3.4:23864369-23864388 | MS.gene86783:intron | 25.0% |
| AAAATTGAGAATTGAAAGGG+GGG | + | chr3.4:23862136-23862155 | None:intergenic | 30.0% | |
| AACCAAATGTAACCTTATCA+TGG | + | chr3.4:23866238-23866257 | None:intergenic | 30.0% | |
| ACATATACATGTCTAATAGG+CGG | - | chr3.4:23865003-23865022 | MS.gene86783:intron | 30.0% | |
| AGTACTCAGTTGAATAAAGT+TGG | + | chr3.4:23863204-23863223 | None:intergenic | 30.0% | |
| AGTTAATCTGTATTAGAAGG+TGG | - | chr3.4:23866311-23866330 | MS.gene86783:intron | 30.0% | |
| ATAAAGTTACACAGAACAAC+AGG | + | chr3.4:23865076-23865095 | None:intergenic | 30.0% | |
| ATTTAACCATGTATTCTGCA+TGG | - | chr3.4:23867150-23867169 | MS.gene86783:intron | 30.0% | |
| ATTTGATCAATAGCATCACT+TGG | + | chr3.4:23866427-23866446 | None:intergenic | 30.0% | |
| CAAAGAAAATCACATGTATC+AGG | + | chr3.4:23865773-23865792 | None:intergenic | 30.0% | |
| CAATTGGGCGTAATTTAATT+TGG | - | chr3.4:23864969-23864988 | MS.gene86783:intron | 30.0% | |
| CATTACGATGTAGAATGATA+AGG | + | chr3.4:23864275-23864294 | None:intergenic | 30.0% | |
| CTCTTCAAATCAAATACCTT+TGG | + | chr3.4:23862451-23862470 | None:intergenic | 30.0% | |
| CTGACATATACATGTCTAAT+AGG | - | chr3.4:23865000-23865019 | MS.gene86783:intron | 30.0% | |
| CTTCAAATCAAATACCTTTG+GGG | + | chr3.4:23862449-23862468 | None:intergenic | 30.0% | |
| GAAAATTGAGAATTGAAAGG+GGG | + | chr3.4:23862137-23862156 | None:intergenic | 30.0% | |
| GAATATGCAATTGCAAACAT+GGG | + | chr3.4:23863812-23863831 | None:intergenic | 30.0% | |
| GAATTTCGGGGATATAATAT+TGG | + | chr3.4:23864318-23864337 | None:intergenic | 30.0% | |
| GATGCATTAAAACCATGTTT+GGG | + | chr3.4:23863242-23863261 | None:intergenic | 30.0% | |
| GGCAAATAAAAATGAAAGAC+AGG | - | chr3.4:23865517-23865536 | MS.gene86783:intron | 30.0% | |
| GTATGTTCATGATAAGATGA+AGG | - | chr3.4:23866564-23866583 | MS.gene86783:intron | 30.0% | |
| GTCACAAATCAATATTAGAG+AGG | - | chr3.4:23864460-23864479 | MS.gene86783:intron | 30.0% | |
| TAAAACCATGTTTGGGTAAA+AGG | + | chr3.4:23863235-23863254 | None:intergenic | 30.0% | |
| TACTGATCTAACTAATTTCC+TGG | - | chr3.4:23865182-23865201 | MS.gene86783:intron | 30.0% | |
| TATTATACGTCTAGATGTGT+TGG | - | chr3.4:23865564-23865583 | MS.gene86783:intron | 30.0% | |
| TCAAAATCAGCATGTAACTA+AGG | - | chr3.4:23867208-23867227 | MS.gene86783:CDS | 30.0% | |
| TGAGGGACAAATATTGTTTA+CGG | - | chr3.4:23862411-23862430 | MS.gene86783:intron | 30.0% | |
| TGATGCATTAAAACCATGTT+TGG | + | chr3.4:23863243-23863262 | None:intergenic | 30.0% | |
| TGCAAAAAACCAGAGATTAT+TGG | + | chr3.4:23867107-23867126 | None:intergenic | 30.0% | |
| TGCAAACATGGGATAATTTA+TGG | + | chr3.4:23863801-23863820 | None:intergenic | 30.0% | |
| TGTTGGAGAGATTATCATTT+AGG | - | chr3.4:23865581-23865600 | MS.gene86783:intron | 30.0% | |
| TTATGATCATAGAGATGATC+TGG | - | chr3.4:23865837-23865856 | MS.gene86783:intron | 30.0% | |
| TTGAAACGTTCAACATATCA+GGG | - | chr3.4:23863591-23863610 | MS.gene86783:intron | 30.0% | |
| TTTAACCATGTATTCTGCAT+GGG | - | chr3.4:23867151-23867170 | MS.gene86783:intron | 30.0% | |
| TTTACTACCTTGTGAATTTC+GGG | + | chr3.4:23864331-23864350 | None:intergenic | 30.0% | |
| ! | ACAATTTTCTGCTGTATATG+TGG | - | chr3.4:23866167-23866186 | MS.gene86783:intron | 30.0% |
| ! | CTGCTTTGATGAGATTATTT+TGG | - | chr3.4:23862947-23862966 | MS.gene86783:intron | 30.0% |
| ! | GATTTAAAATTTCCACATGG+TGG | - | chr3.4:23864552-23864571 | MS.gene86783:intron | 30.0% |
| ! | GTTGATGAAACGAATGATAA+TGG | - | chr3.4:23862253-23862272 | MS.gene86783:intron | 30.0% |
| ! | TTAGTGTTATTGTTGTGGAT+GGG | - | chr3.4:23864232-23864251 | MS.gene86783:intron | 30.0% |
| ! | TTTGAAACGTTCAACATATC+AGG | - | chr3.4:23863590-23863609 | MS.gene86783:intron | 30.0% |
| !! | AATGATAATGGTAACGGTAA+TGG | - | chr3.4:23862265-23862284 | MS.gene86783:intron | 30.0% |
| !! | GAAACGAATGATAATGGTAA+CGG | - | chr3.4:23862259-23862278 | MS.gene86783:intron | 30.0% |
| !! | TTTTGAAGAGAGATTTCAGA+AGG | - | chr3.4:23866674-23866693 | MS.gene86783:intron | 30.0% |
| !!! | AACATGGTTTTAATGCATCA+TGG | - | chr3.4:23863243-23863262 | MS.gene86783:intron | 30.0% |
| !!! | ACATGGTTTTAATGCATCAT+GGG | - | chr3.4:23863244-23863263 | MS.gene86783:intron | 30.0% |
| !!! | TGGTTATTTTAGACAGTTTC+TGG | + | chr3.4:23864838-23864857 | None:intergenic | 30.0% |
| !!! | TTAGTTACATGCTGATTTTG+AGG | + | chr3.4:23867209-23867228 | None:intergenic | 30.0% |
| AAATAAACCGCTATTGCTCT+GGG | - | chr3.4:23862812-23862831 | MS.gene86783:intron | 35.0% | |
| AACCGATCAAACATAAAGTC+GGG | + | chr3.4:23865430-23865449 | None:intergenic | 35.0% | |
| AACGGCATTAATTCGCTATA+TGG | - | chr3.4:23864387-23864406 | MS.gene86783:intron | 35.0% | |
| AAGAGATAAATGGGAATACG+AGG | - | chr3.4:23864707-23864726 | MS.gene86783:intron | 35.0% | |
| AAGAGGTTATGTTAGGGATT+GGG | - | chr3.4:23862327-23862346 | MS.gene86783:intron | 35.0% | |
| AATCATGCACAGAGAAATAC+AGG | + | chr3.4:23867050-23867069 | None:intergenic | 35.0% | |
| AATCATGTAACATGTCTCCA+AGG | - | chr3.4:23867009-23867028 | MS.gene86783:CDS | 35.0% | |
| AATCTACGGATATAGATCCA+TGG | + | chr3.4:23863966-23863985 | None:intergenic | 35.0% | |
| ACAATGGCATACTCATAAAG+AGG | + | chr3.4:23866609-23866628 | None:intergenic | 35.0% | |
| ACAATTAGAGACACACATTG+CGG | + | chr3.4:23862172-23862191 | None:intergenic | 35.0% | |
| ACATGATTATGTTCGGAAGA+TGG | + | chr3.4:23863066-23863085 | None:intergenic | 35.0% | |
| ACTTATTAAACACACGAGTC+TGG | - | chr3.4:23863030-23863049 | MS.gene86783:intron | 35.0% | |
| AGACCTTTGACTAACTTTCT+TGG | - | chr3.4:23865868-23865887 | MS.gene86783:intron | 35.0% | |
| AGAGATAAATGGGAATACGA+GGG | - | chr3.4:23864708-23864727 | MS.gene86783:intron | 35.0% | |
| AGATATTGCTCCAGTAATTG+AGG | - | chr3.4:23865116-23865135 | MS.gene86783:intron | 35.0% | |
| AGCCATGATAAGGTTACATT+TGG | - | chr3.4:23866233-23866252 | MS.gene86783:intron | 35.0% | |
| ATAAAGTATGGTAACCAAGG+AGG | + | chr3.4:23863304-23863323 | None:intergenic | 35.0% | |
| ATAGACATTCGGTTGTCATT+TGG | + | chr3.4:23864902-23864921 | None:intergenic | 35.0% | |
| ATCTACGGATATAGATCCAT+GGG | + | chr3.4:23863965-23863984 | None:intergenic | 35.0% | |
| ATGCTATTGCCAATAATCTC+TGG | - | chr3.4:23867095-23867114 | MS.gene86783:intron | 35.0% | |
| ATGTCACGGTTGAAATAGTA+CGG | + | chr3.4:23865996-23866015 | None:intergenic | 35.0% | |
| CAAATTACCTTAACCAAGGT+AGG | + | chr3.4:23866729-23866748 | None:intergenic | 35.0% | |
| CCTAGAAAATGTCATATTCG+AGG | + | chr3.4:23864363-23864382 | None:intergenic | 35.0% | |
| CGAACAAATTACCTTAACCA+AGG | + | chr3.4:23866733-23866752 | None:intergenic | 35.0% | |
| CTCAAAGAAAAACAGGAAGA+TGG | - | chr3.4:23864178-23864197 | MS.gene86783:CDS | 35.0% | |
| CTGAATATTGAGCCATGATA+AGG | - | chr3.4:23866223-23866242 | MS.gene86783:intron | 35.0% | |
| CTGGAAAATACTGTAGTTTG+TGG | - | chr3.4:23866036-23866055 | MS.gene86783:intron | 35.0% | |
| GAACCGATCAAACATAAAGT+CGG | + | chr3.4:23865431-23865450 | None:intergenic | 35.0% | |
| GACATTGGTCATGGAAAAAT+AGG | - | chr3.4:23863680-23863699 | MS.gene86783:intron | 35.0% | |
| GACCTTTGACTAACTTTCTT+GGG | - | chr3.4:23865869-23865888 | MS.gene86783:intron | 35.0% | |
| GATATTGCTCCAGTAATTGA+GGG | - | chr3.4:23865117-23865136 | MS.gene86783:intron | 35.0% | |
| GCATTAATTCGCTATATGGT+TGG | - | chr3.4:23864391-23864410 | MS.gene86783:intron | 35.0% | |
| GGAAGAGAAAGATATACAGT+TGG | - | chr3.4:23865907-23865926 | MS.gene86783:intron | 35.0% | |
| GGAATATGCAATTGCAAACA+TGG | + | chr3.4:23863813-23863832 | None:intergenic | 35.0% | |
| TAAATAAACCGCTATTGCTC+TGG | - | chr3.4:23862811-23862830 | MS.gene86783:intron | 35.0% | |
| TAAGAGGTTATGTTAGGGAT+TGG | - | chr3.4:23862326-23862345 | MS.gene86783:intron | 35.0% | |
| TACGATGTAGAATGATAAGG+AGG | + | chr3.4:23864272-23864291 | None:intergenic | 35.0% | |
| TAGAATGATAAGGAGGTTGA+GGG | + | chr3.4:23864265-23864284 | None:intergenic | 35.0% | |
| TATTAGAAGGTGGAATGTTG+TGG | - | chr3.4:23866321-23866340 | MS.gene86783:intron | 35.0% | |
| TATTATACCATTTGCCTCCT+TGG | - | chr3.4:23863287-23863306 | MS.gene86783:CDS | 35.0% | |
| TCAATTACTGGAGCAATATC+TGG | + | chr3.4:23865117-23865136 | None:intergenic | 35.0% | |
| TCCAAACTCAAATCTTCTTG+AGG | + | chr3.4:23865160-23865179 | None:intergenic | 35.0% | |
| TCTAACAGTCACAAGATAGA+AGG | + | chr3.4:23866767-23866786 | None:intergenic | 35.0% | |
| TGGCACTTTCTAAACTTGAA+TGG | + | chr3.4:23864525-23864544 | None:intergenic | 35.0% | |
| TGTGGTTATAACATCCAACA+GGG | - | chr3.4:23864762-23864781 | MS.gene86783:intron | 35.0% | |
| TTACTACCTTGTGAATTTCG+GGG | + | chr3.4:23864330-23864349 | None:intergenic | 35.0% | |
| TTATATCCCCGAAATTCACA+AGG | - | chr3.4:23864321-23864340 | MS.gene86783:intron | 35.0% | |
| TTCCCGACTTTATGTTTGAT+CGG | - | chr3.4:23865425-23865444 | MS.gene86783:intron | 35.0% | |
| TTTCACGATTATCAGATTCG+AGG | + | chr3.4:23865472-23865491 | None:intergenic | 35.0% | |
| ! | ATTAACACTGGTTACTGAAG+AGG | - | chr3.4:23865492-23865511 | MS.gene86783:intron | 35.0% |
| ! | CCTCGAATATGACATTTTCT+AGG | - | chr3.4:23864360-23864379 | MS.gene86783:intron | 35.0% |
| ! | GAAAATACTGTAGTTTGTGG+CGG | - | chr3.4:23866039-23866058 | MS.gene86783:intron | 35.0% |
| ! | GTTAGTGTTATTGTTGTGGA+TGG | - | chr3.4:23864231-23864250 | MS.gene86783:intron | 35.0% |
| ! | GTTTTATCACTCTATGCTGT+GGG | - | chr3.4:23863635-23863654 | MS.gene86783:intron | 35.0% |
| ! | TAGTGTTATTGTTGTGGATG+GGG | - | chr3.4:23864233-23864252 | MS.gene86783:intron | 35.0% |
| ! | TCAAGAAGATTTGAGTTTGG+AGG | - | chr3.4:23865159-23865178 | MS.gene86783:intron | 35.0% |
| ! | TCTAAAATAACCACTCCTCT+AGG | - | chr3.4:23864845-23864864 | MS.gene86783:intron | 35.0% |
| ! | TGTTTATGGGTTATCCAACT+AGG | - | chr3.4:23863393-23863412 | MS.gene86783:CDS | 35.0% |
| ! | TTAACACTGGTTACTGAAGA+GGG | - | chr3.4:23865493-23865512 | MS.gene86783:intron | 35.0% |
| ! | TTACACCTTTTACCCAAACA+TGG | - | chr3.4:23863227-23863246 | MS.gene86783:intron | 35.0% |
| !! | AGTTTTATCACTCTATGCTG+TGG | - | chr3.4:23863634-23863653 | MS.gene86783:intron | 35.0% |
| !! | ATAATATTGGCTTGGTGGTT+GGG | + | chr3.4:23864305-23864324 | None:intergenic | 35.0% |
| !! | CACCCCCAATTTAATTTTCA+AGG | + | chr3.4:23863443-23863462 | None:intergenic | 35.0% |
| !! | CATCTTCCTGTTTTTCTTTG+AGG | + | chr3.4:23864180-23864199 | None:intergenic | 35.0% |
| !! | TATAATATTGGCTTGGTGGT+TGG | + | chr3.4:23864306-23864325 | None:intergenic | 35.0% |
| !! | TATGTTTTGTACAGTGGACT+TGG | - | chr3.4:23862373-23862392 | MS.gene86783:intron | 35.0% |
| !! | TCTTCCTCTGGAATAGATAT+GGG | + | chr3.4:23865735-23865754 | None:intergenic | 35.0% |
| !! | TTCTTCCTCTGGAATAGATA+TGG | + | chr3.4:23865736-23865755 | None:intergenic | 35.0% |
| !! | TTTTCAGGCATATATTCTGG+AGG | + | chr3.4:23867131-23867150 | None:intergenic | 35.0% |
| AAGGCAGACTATGACGAAAA+CGG | - | chr3.4:23867227-23867246 | MS.gene86783:CDS | 40.0% | |
| AATTTCCTGGCTCAAGAACT+TGG | - | chr3.4:23865195-23865214 | MS.gene86783:intron | 40.0% | |
| ACATTTACGCACCAGCTTTA+AGG | + | chr3.4:23864113-23864132 | None:intergenic | 40.0% | |
| ACCATTCGTTTCATCTGACT+AGG | + | chr3.4:23862235-23862254 | None:intergenic | 40.0% | |
| ATCAACACATCCCTTAAAGC+TGG | - | chr3.4:23864099-23864118 | MS.gene86783:CDS | 40.0% | |
| ATGATAAGAGTTGGACACCT+GGG | - | chr3.4:23863882-23863901 | MS.gene86783:intron | 40.0% | |
| ATTTCCACATGGTGGTAACT+TGG | - | chr3.4:23864560-23864579 | MS.gene86783:intron | 40.0% | |
| CAAATCTTCTTGAGGCAATG+TGG | + | chr3.4:23865152-23865171 | None:intergenic | 40.0% | |
| CATTAACTTATACAGACCCC+AGG | + | chr3.4:23863902-23863921 | None:intergenic | 40.0% | |
| CCGATGATTATCAGATGTCA+CGG | + | chr3.4:23866010-23866029 | None:intergenic | 40.0% | |
| CCGTGACATCTGATAATCAT+CGG | - | chr3.4:23866007-23866026 | MS.gene86783:intron | 40.0% | |
| CTAACATAACCTCTTACCAC+CGG | + | chr3.4:23862322-23862341 | None:intergenic | 40.0% | |
| CTAACTGTTCTTTGTTAGCC+TGG | + | chr3.4:23863559-23863578 | None:intergenic | 40.0% | |
| CTGTGGTTATAACATCCAAC+AGG | - | chr3.4:23864761-23864780 | MS.gene86783:intron | 40.0% | |
| CTGTTGGATGTTATAACCAC+AGG | + | chr3.4:23864763-23864782 | None:intergenic | 40.0% | |
| CTTGGACCTCAAAGAAAAAC+AGG | - | chr3.4:23864171-23864190 | MS.gene86783:CDS | 40.0% | |
| GAACAATGGCTTCTTGCATA+AGG | + | chr3.4:23866917-23866936 | None:intergenic | 40.0% | |
| GACATGCTGATATTCACTAG+TGG | + | chr3.4:23865231-23865250 | None:intergenic | 40.0% | |
| GATCATAGAGATGATCTGGA+TGG | - | chr3.4:23865841-23865860 | MS.gene86783:intron | 40.0% | |
| GATTAACCACATTCTTCCTC+TGG | + | chr3.4:23865747-23865766 | None:intergenic | 40.0% | |
| GGAAACAATCTACGTGCTAA+AGG | + | chr3.4:23863834-23863853 | None:intergenic | 40.0% | |
| GGTGGTAAGAGGTTATGTTA+GGG | - | chr3.4:23862321-23862340 | MS.gene86783:intron | 40.0% | |
| GTAGAATGATAAGGAGGTTG+AGG | + | chr3.4:23864266-23864285 | None:intergenic | 40.0% | |
| GTCATTGTTGTGTTAGTGTC+TGG | - | chr3.4:23862677-23862696 | MS.gene86783:intron | 40.0% | |
| TAGCACGTAGATTGTTTCCT+GGG | - | chr3.4:23863835-23863854 | MS.gene86783:intron | 40.0% | |
| TATGATAAGAGTTGGACACC+TGG | - | chr3.4:23863881-23863900 | MS.gene86783:intron | 40.0% | |
| TCAAACATAAAGTCGGGAAC+AGG | + | chr3.4:23865424-23865443 | None:intergenic | 40.0% | |
| TCCTAGTCAGATGAAACGAA+TGG | - | chr3.4:23862231-23862250 | MS.gene86783:intron | 40.0% | |
| TCTACGGATATAGATCCATG+GGG | + | chr3.4:23863964-23863983 | None:intergenic | 40.0% | |
| TCTATTCCAGAGGAAGAATG+TGG | - | chr3.4:23865738-23865757 | MS.gene86783:CDS | 40.0% | |
| TGATAATCATCGGCAACTTC+TGG | - | chr3.4:23866017-23866036 | MS.gene86783:intron | 40.0% | |
| TGCCCAAGAAAGTTAGTCAA+AGG | + | chr3.4:23865874-23865893 | None:intergenic | 40.0% | |
| TTAACAGCACCCTCAATTAC+TGG | + | chr3.4:23865129-23865148 | None:intergenic | 40.0% | |
| TTAGCACGTAGATTGTTTCC+TGG | - | chr3.4:23863834-23863853 | MS.gene86783:intron | 40.0% | |
| TTATTCCAGCCAAGTCTCTT+GGG | - | chr3.4:23865937-23865956 | MS.gene86783:intron | 40.0% | |
| TTGATCCGGAATTGCAAATC+CGG | + | chr3.4:23862092-23862111 | None:intergenic | 40.0% | |
| TTTATTCCAGCCAAGTCTCT+TGG | - | chr3.4:23865936-23865955 | MS.gene86783:intron | 40.0% | |
| TTTGACTAACTTTCTTGGGC+AGG | - | chr3.4:23865873-23865892 | MS.gene86783:intron | 40.0% | |
| ! | ACATGTCTCCAAGGCATTAT+AGG | - | chr3.4:23867018-23867037 | MS.gene86783:CDS | 40.0% |
| ! | ATGAAGACAATGAAGTACCC+AGG | + | chr3.4:23863855-23863874 | None:intergenic | 40.0% |
| ! | CATTTACGCACCAGCTTTAA+GGG | + | chr3.4:23864112-23864131 | None:intergenic | 40.0% |
| ! | GCCTCAAGAAGATTTGAGTT+TGG | - | chr3.4:23865156-23865175 | MS.gene86783:intron | 40.0% |
| ! | GCTGATATTCACTAGTGGAT+TGG | + | chr3.4:23865226-23865245 | None:intergenic | 40.0% |
| ! | GTTAGCTCTTGCATTCAAGT+TGG | - | chr3.4:23864413-23864432 | MS.gene86783:intron | 40.0% |
| ! | TCGGGGATATAATATTGGCT+TGG | + | chr3.4:23864313-23864332 | None:intergenic | 40.0% |
| ! | TTTGTACAGTGGACTTGGAT+GGG | - | chr3.4:23862378-23862397 | MS.gene86783:intron | 40.0% |
| !! | AATACCTTTGGGGTACAAAG+TGG | + | chr3.4:23862439-23862458 | None:intergenic | 40.0% |
| !! | CATATCAGGGTTTTATGCCT+CGG | - | chr3.4:23863604-23863623 | MS.gene86783:intron | 40.0% |
| !! | CTTCCTCTGGAATAGATATG+GGG | + | chr3.4:23865734-23865753 | None:intergenic | 40.0% |
| !! | GGATGGGAAATTGGTAATGA+GGG | - | chr3.4:23862394-23862413 | MS.gene86783:intron | 40.0% |
| !! | GGGATATAATATTGGCTTGG+TGG | + | chr3.4:23864310-23864329 | None:intergenic | 40.0% |
| !! | GTTGTCATTTGGTGTGGTTT+GGG | + | chr3.4:23864891-23864910 | None:intergenic | 40.0% |
| !! | TAATATTGGCTTGGTGGTTG+GGG | + | chr3.4:23864304-23864323 | None:intergenic | 40.0% |
| !! | TGGATGGGAAATTGGTAATG+AGG | - | chr3.4:23862393-23862412 | MS.gene86783:intron | 40.0% |
| !! | TTTTGTACAGTGGACTTGGA+TGG | - | chr3.4:23862377-23862396 | MS.gene86783:intron | 40.0% |
| AACCATGTATTCTGCATGGG+TGG | - | chr3.4:23867154-23867173 | MS.gene86783:intron | 45.0% | |
| AACTTGTGTAACTGCCCTGT+TGG | + | chr3.4:23864779-23864798 | None:intergenic | 45.0% | |
| AATAGCATCACTTGGCAAGC+AGG | + | chr3.4:23866419-23866438 | None:intergenic | 45.0% | |
| ACCATGTATTCTGCATGGGT+GGG | - | chr3.4:23867155-23867174 | MS.gene86783:intron | 45.0% | |
| AGGCAGACTATGACGAAAAC+GGG | - | chr3.4:23867228-23867247 | MS.gene86783:CDS | 45.0% | |
| ATGGTAACCAAGGAGGCAAA+TGG | + | chr3.4:23863297-23863316 | None:intergenic | 45.0% | |
| ATTTGCCAAGTTCTTGAGCC+AGG | + | chr3.4:23865203-23865222 | None:intergenic | 45.0% | |
| CAAAGCCGGATTTGCAATTC+CGG | - | chr3.4:23862084-23862103 | MS.gene86783:CDS | 45.0% | |
| CACTGTACACGCCTTCAAAT+TGG | - | chr3.4:23862717-23862736 | MS.gene86783:intron | 45.0% | |
| CATTTCCGGTGAACAATGGA+AGG | + | chr3.4:23867254-23867273 | None:intergenic | 45.0% | |
| CGGTGGTAAGAGGTTATGTT+AGG | - | chr3.4:23862320-23862339 | MS.gene86783:intron | 45.0% | |
| CTAGTATTGCTTCTTGCTGC+AGG | - | chr3.4:23866651-23866670 | MS.gene86783:intron | 45.0% | |
| CTGGTGCGTAAATGTATGCA+TGG | - | chr3.4:23864118-23864137 | MS.gene86783:CDS | 45.0% | |
| CTTGGGCAGGTGATAACAAT+TGG | - | chr3.4:23865886-23865905 | MS.gene86783:intron | 45.0% | |
| GAATTGCAAATCCGGCTTTG+AGG | + | chr3.4:23862084-23862103 | None:intergenic | 45.0% | |
| GACAGAAAACTCTTGTCCTG+TGG | - | chr3.4:23865314-23865333 | MS.gene86783:intron | 45.0% | |
| GGACAAAGCCTATAATGCCT+TGG | + | chr3.4:23867029-23867048 | None:intergenic | 45.0% | |
| GTACACGCCTTCAAATTGGA+GGG | - | chr3.4:23862721-23862740 | MS.gene86783:intron | 45.0% | |
| TATCACTCTATGCTGTGGGA+AGG | - | chr3.4:23863639-23863658 | MS.gene86783:intron | 45.0% | |
| TATCCGCGATTGTCAACACT+GGG | - | chr3.4:23862906-23862925 | MS.gene86783:intron | 45.0% | |
| TATTCCAGCCAAGTCTCTTG+GGG | - | chr3.4:23865938-23865957 | MS.gene86783:intron | 45.0% | |
| TCGCGGATAGCAGAAAATAG+AGG | + | chr3.4:23862895-23862914 | None:intergenic | 45.0% | |
| TCTGGATGCACAGTTGACAT+TGG | - | chr3.4:23863665-23863684 | MS.gene86783:intron | 45.0% | |
| TGATAAAACTGCCTGTTCCG+AGG | + | chr3.4:23863624-23863643 | None:intergenic | 45.0% | |
| TGATAAGAGTTGGACACCTG+GGG | - | chr3.4:23863883-23863902 | MS.gene86783:intron | 45.0% | |
| TGCACAGTTGACATTGGTCA+TGG | - | chr3.4:23863671-23863690 | MS.gene86783:intron | 45.0% | |
| TGTACACGCCTTCAAATTGG+AGG | - | chr3.4:23862720-23862739 | MS.gene86783:intron | 45.0% | |
| TGTCCCCATATCTATTCCAG+AGG | - | chr3.4:23865728-23865747 | MS.gene86783:CDS | 45.0% | |
| TGTTAGGGATTGGGATGCTA+TGG | - | chr3.4:23862336-23862355 | MS.gene86783:intron | 45.0% | |
| TGTTCCAAGTTACCACCATG+TGG | + | chr3.4:23864567-23864586 | None:intergenic | 45.0% | |
| TGTTCGACCTACCTTGGTTA+AGG | - | chr3.4:23866719-23866738 | MS.gene86783:intron | 45.0% | |
| ! | AGTGGACTTGGATGGGAAAT+TGG | - | chr3.4:23862385-23862404 | MS.gene86783:intron | 45.0% |
| ! | CACACTTTATCGTTAGCCTG+TGG | - | chr3.4:23864744-23864763 | MS.gene86783:intron | 45.0% |
| ! | CATTCGGTTGTCATTTGGTG+TGG | + | chr3.4:23864897-23864916 | None:intergenic | 45.0% |
| ! | GAAGCATTTCCGGTGAACAA+TGG | + | chr3.4:23867258-23867277 | None:intergenic | 45.0% |
| ! | TAACGGTAATGGTCAGTTGG+TGG | - | chr3.4:23862276-23862295 | MS.gene86783:intron | 45.0% |
| !! | AAAGGGGGGTATTGTTACCA+TGG | + | chr3.4:23862122-23862141 | None:intergenic | 45.0% |
| !! | GGTTGTCATTTGGTGTGGTT+TGG | + | chr3.4:23864892-23864911 | None:intergenic | 45.0% |
| !! | TGGTAACGGTAATGGTCAGT+TGG | - | chr3.4:23862273-23862292 | MS.gene86783:intron | 45.0% |
| AAAAGGCAGACCTGTCCATC+AGG | + | chr3.4:23865354-23865373 | None:intergenic | 50.0% | |
| ACGCCTTCAAATTGGAGGGT+TGG | - | chr3.4:23862725-23862744 | MS.gene86783:intron | 50.0% | |
| ACTTGGCAAGCAGGACATCT+CGG | + | chr3.4:23866410-23866429 | None:intergenic | 50.0% | |
| AGCGTATCCCAGAGCAATAG+CGG | + | chr3.4:23862822-23862841 | None:intergenic | 50.0% | |
| ATCCGCGATTGTCAACACTG+GGG | - | chr3.4:23862907-23862926 | MS.gene86783:intron | 50.0% | |
| ATCTGCTGTTCGACCTACCT+TGG | - | chr3.4:23866713-23866732 | MS.gene86783:intron | 50.0% | |
| ATGTATTCTGCATGGGTGGG+AGG | - | chr3.4:23867158-23867177 | MS.gene86783:intron | 50.0% | |
| CAAACAACCCAGTGCCTAGT+TGG | + | chr3.4:23863410-23863429 | None:intergenic | 50.0% | |
| CGCCTTCAAATTGGAGGGTT+GGG | - | chr3.4:23862726-23862745 | MS.gene86783:intron | 50.0% | |
| CTAGGCTCTCTGATTCCTAG+AGG | + | chr3.4:23864863-23864882 | None:intergenic | 50.0% | |
| CTATCCGCGATTGTCAACAC+TGG | - | chr3.4:23862905-23862924 | MS.gene86783:intron | 50.0% | |
| CTCTCTGATTCCTAGAGGAG+TGG | + | chr3.4:23864858-23864877 | None:intergenic | 50.0% | |
| CTCTTGGGGTTAGAGACTCA+TGG | - | chr3.4:23865952-23865971 | MS.gene86783:intron | 50.0% | |
| GAGACACATACCCTTCCTGA+TGG | - | chr3.4:23865336-23865355 | MS.gene86783:intron | 50.0% | |
| GCCTTCAAATTGGAGGGTTG+GGG | - | chr3.4:23862727-23862746 | MS.gene86783:intron | 50.0% | |
| GGATCCACTTTGTACCCCAA+AGG | - | chr3.4:23862432-23862451 | MS.gene86783:intron | 50.0% | |
| GGGTTATCCAACTAGGCACT+GGG | - | chr3.4:23863400-23863419 | MS.gene86783:CDS | 50.0% | |
| GTCTCTAACCCCAAGAGACT+TGG | + | chr3.4:23865949-23865968 | None:intergenic | 50.0% | |
| TAGGGATTGGGATGCTATGG+AGG | - | chr3.4:23862339-23862358 | MS.gene86783:intron | 50.0% | |
| TATAGATCCATGGGGCTGAG+AGG | + | chr3.4:23863956-23863975 | None:intergenic | 50.0% | |
| TATGCTGTGGGAAGGATCTC+TGG | - | chr3.4:23863647-23863666 | MS.gene86783:intron | 50.0% | |
| TCCCACCCATGCAGAATACA+TGG | + | chr3.4:23867159-23867178 | None:intergenic | 50.0% | |
| TGGGTTATCCAACTAGGCAC+TGG | - | chr3.4:23863399-23863418 | MS.gene86783:CDS | 50.0% | |
| ! | ACACTGGTTACTGAAGAGGG+AGG | - | chr3.4:23865496-23865515 | MS.gene86783:intron | 50.0% |
| ! | ACATACCCTTCCTGATGGAC+AGG | - | chr3.4:23865341-23865360 | MS.gene86783:intron | 50.0% |
| !! | AGGGTTTTATGCCTCGGAAC+AGG | - | chr3.4:23863610-23863629 | MS.gene86783:intron | 50.0% |
| !! | ATCCCCAGTGTTGACAATCG+CGG | + | chr3.4:23862912-23862931 | None:intergenic | 50.0% |
| !! | TTGCAAATCCGGCTTTGAGG+AGG | + | chr3.4:23862081-23862100 | None:intergenic | 50.0% |
| AAGAAGTCCTCTCAGCCCCA+TGG | - | chr3.4:23863946-23863965 | MS.gene86783:intron | 55.0% | |
| ACGGGCCTTCCATTGTTCAC+CGG | - | chr3.4:23867246-23867265 | MS.gene86783:CDS | 55.0% | |
| CTAACCCCAAGAGACTTGGC+TGG | + | chr3.4:23865945-23865964 | None:intergenic | 55.0% | |
| GCAGACCTGTCCATCAGGAA+GGG | + | chr3.4:23865349-23865368 | None:intergenic | 55.0% | |
| GCCCCAACCCTCCAATTTGA+AGG | + | chr3.4:23862731-23862750 | None:intergenic | 55.0% | |
| GGATGATGTCGCGGTTGAAC+CGG | - | chr3.4:23862300-23862319 | MS.gene86783:intron | 55.0% | |
| ! | ACCATGGCGGGAGTTTGATC+CGG | + | chr3.4:23862106-23862125 | None:intergenic | 55.0% |
| ! | GGAAGGGTATGTGTCTCCAC+AGG | + | chr3.4:23865333-23865352 | None:intergenic | 55.0% |
| ! | GGTGTGGTTTGGGAGAGACT+AGG | + | chr3.4:23864881-23864900 | None:intergenic | 55.0% |
| !! | AAATCCGGCTTTGAGGAGGC+TGG | + | chr3.4:23862077-23862096 | None:intergenic | 55.0% |
| !! | ATTGGCTTGGTGGTTGGGGT+GGG | + | chr3.4:23864300-23864319 | None:intergenic | 55.0% |
| !! | CGGTAATGGTCAGTTGGTGG+TGG | - | chr3.4:23862279-23862298 | MS.gene86783:intron | 55.0% |
| !! | GGAACCAGCGTCGATTACTG+CGG | + | chr3.4:23862056-23862075 | None:intergenic | 55.0% |
| !! | GGGGGGTATTGTTACCATGG+CGG | + | chr3.4:23862119-23862138 | None:intergenic | 55.0% |
| !! | GGGGGTATTGTTACCATGGC+GGG | + | chr3.4:23862118-23862137 | None:intergenic | 55.0% |
| !! | GTTGGTGGTGGATGATGTCG+CGG | - | chr3.4:23862291-23862310 | MS.gene86783:intron | 55.0% |
| !! | TATTGGCTTGGTGGTTGGGG+TGG | + | chr3.4:23864301-23864320 | None:intergenic | 55.0% |
| GAAGCCGCAGTAATCGACGC+TGG | - | chr3.4:23862049-23862068 | MS.gene86783:CDS | 60.0% | |
| GCGGTTGAACCGGTGGTAAG+AGG | - | chr3.4:23862310-23862329 | MS.gene86783:intron | 60.0% | |
| GGCAGACCTGTCCATCAGGA+AGG | + | chr3.4:23865350-23865369 | None:intergenic | 60.0% | |
| GGCGGCACTTCTTCCATGAC+TGG | - | chr3.4:23866057-23866076 | MS.gene86783:intron | 60.0% | |
| GGTTCCAGCCTCCTCAAAGC+CGG | - | chr3.4:23862070-23862089 | MS.gene86783:CDS | 60.0% | |
| TCCGGATCAAACTCCCGCCA+TGG | - | chr3.4:23862102-23862121 | MS.gene86783:CDS | 60.0% | |
| TGATGTCGCGGTTGAACCGG+TGG | - | chr3.4:23862303-23862322 | MS.gene86783:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 23862046 | 23867280 | 23862046 | ID=MS.gene86783 |
| chr3.4 | mRNA | 23862046 | 23867280 | 23862046 | ID=MS.gene86783.t1;Parent=MS.gene86783 |
| chr3.4 | exon | 23867203 | 23867280 | 23867203 | ID=MS.gene86783.t1.exon1;Parent=MS.gene86783.t1 |
| chr3.4 | CDS | 23867203 | 23867280 | 23867203 | ID=cds.MS.gene86783.t1;Parent=MS.gene86783.t1 |
| chr3.4 | exon | 23866873 | 23867100 | 23866873 | ID=MS.gene86783.t1.exon2;Parent=MS.gene86783.t1 |
| chr3.4 | CDS | 23866873 | 23867100 | 23866873 | ID=cds.MS.gene86783.t1;Parent=MS.gene86783.t1 |
| chr3.4 | exon | 23865625 | 23865766 | 23865625 | ID=MS.gene86783.t1.exon3;Parent=MS.gene86783.t1 |
| chr3.4 | CDS | 23865625 | 23865766 | 23865625 | ID=cds.MS.gene86783.t1;Parent=MS.gene86783.t1 |
| chr3.4 | exon | 23863964 | 23864208 | 23863964 | ID=MS.gene86783.t1.exon4;Parent=MS.gene86783.t1 |
| chr3.4 | CDS | 23863964 | 23864208 | 23863964 | ID=cds.MS.gene86783.t1;Parent=MS.gene86783.t1 |
| chr3.4 | exon | 23863248 | 23863431 | 23863248 | ID=MS.gene86783.t1.exon5;Parent=MS.gene86783.t1 |
| chr3.4 | CDS | 23863248 | 23863431 | 23863248 | ID=cds.MS.gene86783.t1;Parent=MS.gene86783.t1 |
| chr3.4 | exon | 23862586 | 23862653 | 23862586 | ID=MS.gene86783.t1.exon6;Parent=MS.gene86783.t1 |
| chr3.4 | CDS | 23862586 | 23862653 | 23862586 | ID=cds.MS.gene86783.t1;Parent=MS.gene86783.t1 |
| chr3.4 | exon | 23862046 | 23862198 | 23862046 | ID=MS.gene86783.t1.exon7;Parent=MS.gene86783.t1 |
| chr3.4 | CDS | 23862046 | 23862198 | 23862046 | ID=cds.MS.gene86783.t1;Parent=MS.gene86783.t1 |
| Gene Sequence |
| Protein sequence |
