Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88148.t1 | XP_003605489.2 | 95.3 | 254 | 12 | 0 | 1 | 254 | 2 | 255 | 1.70E-107 | 399.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88148.t1 | F4HT21 | 50.0 | 254 | 117 | 2 | 1 | 254 | 6 | 249 | 1.8e-62 | 241.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88148.t1 | G7JN49 | 95.3 | 254 | 12 | 0 | 1 | 254 | 2 | 255 | 1.2e-107 | 399.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene88148 | 0.844528 | 7.15E-59 | -1.69E-46 |
| MS.gene049424 | MS.gene88148 | 0.838456 | 2.84E-57 | -1.69E-46 |
| MS.gene049653 | MS.gene88148 | 0.823814 | 1.13E-53 | -1.69E-46 |
| MS.gene049861 | MS.gene88148 | 0.800068 | 1.71E-48 | -1.69E-46 |
| MS.gene049951 | MS.gene88148 | 0.812388 | 4.35E-51 | -1.69E-46 |
| MS.gene050277 | MS.gene88148 | 0.814183 | 1.75E-51 | -1.69E-46 |
| MS.gene051245 | MS.gene88148 | 0.817258 | 3.62E-52 | -1.69E-46 |
| MS.gene051349 | MS.gene88148 | 0.814098 | 1.83E-51 | -1.69E-46 |
| MS.gene051452 | MS.gene88148 | 0.812831 | 3.48E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene88148 | 0.813843 | 2.08E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene88148 | 0.821002 | 5.09E-53 | -1.69E-46 |
| MS.gene052286 | MS.gene88148 | 0.826094 | 3.28E-54 | -1.69E-46 |
| MS.gene052302 | MS.gene88148 | 0.802202 | 6.27E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene88148 | 0.803685 | 3.10E-49 | -1.69E-46 |
| MS.gene052426 | MS.gene88148 | 0.813346 | 2.68E-51 | -1.69E-46 |
| MS.gene052500 | MS.gene88148 | 0.812538 | 4.03E-51 | -1.69E-46 |
| MS.gene052502 | MS.gene88148 | 0.811175 | 7.98E-51 | -1.69E-46 |
| MS.gene052824 | MS.gene88148 | 0.817857 | 2.65E-52 | -1.69E-46 |
| MS.gene052826 | MS.gene88148 | 0.810283 | 1.25E-50 | -1.69E-46 |
| MS.gene052954 | MS.gene88148 | 0.824871 | 6.38E-54 | -1.69E-46 |
| MS.gene053109 | MS.gene88148 | 0.800811 | 1.21E-48 | -1.69E-46 |
| MS.gene053216 | MS.gene88148 | 0.834964 | 2.21E-56 | -1.69E-46 |
| MS.gene053931 | MS.gene88148 | 0.806003 | 1.02E-49 | -1.69E-46 |
| MS.gene054537 | MS.gene88148 | 0.801316 | 9.54E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene88148 | 0.834266 | 3.31E-56 | -1.69E-46 |
| MS.gene054994 | MS.gene88148 | 0.809835 | 1.55E-50 | -1.69E-46 |
| MS.gene05510 | MS.gene88148 | 0.805857 | 1.09E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene88148 | 0.806106 | 9.66E-50 | -1.69E-46 |
| MS.gene056849 | MS.gene88148 | 0.813326 | 2.71E-51 | -1.69E-46 |
| MS.gene057079 | MS.gene88148 | 0.837894 | 3.97E-57 | -1.69E-46 |
| MS.gene057108 | MS.gene88148 | 0.805395 | 1.36E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene88148 | 0.822419 | 2.39E-53 | -1.69E-46 |
| MS.gene057234 | MS.gene88148 | 0.805774 | 1.13E-49 | -1.69E-46 |
| MS.gene057392 | MS.gene88148 | 0.840385 | 8.98E-58 | -1.69E-46 |
| MS.gene05795 | MS.gene88148 | 0.847129 | 1.41E-59 | -1.69E-46 |
| MS.gene057999 | MS.gene88148 | 0.814026 | 1.90E-51 | -1.69E-46 |
| MS.gene058238 | MS.gene88148 | 0.835593 | 1.53E-56 | -1.69E-46 |
| MS.gene058399 | MS.gene88148 | 0.801271 | 9.74E-49 | -1.69E-46 |
| MS.gene058595 | MS.gene88148 | 0.803086 | 4.12E-49 | -1.69E-46 |
| MS.gene059317 | MS.gene88148 | 0.835079 | 2.07E-56 | -1.69E-46 |
| MS.gene059710 | MS.gene88148 | 0.823795 | 1.14E-53 | -1.69E-46 |
| MS.gene059830 | MS.gene88148 | 0.823423 | 1.40E-53 | -1.69E-46 |
| MS.gene060297 | MS.gene88148 | 0.812905 | 3.35E-51 | -1.69E-46 |
| MS.gene060586 | MS.gene88148 | 0.830446 | 2.92E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene009458 | MS.gene88148 | PPI |
| MS.gene56256 | MS.gene88148 | PPI |
| MS.gene63514 | MS.gene88148 | PPI |
| MS.gene51627 | MS.gene88148 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88148.t1 | MTR_4g032220 | 92.197 | 346 | 26 | 1 | 1 | 345 | 2 | 347 | 0.0 | 607 |
| MS.gene88148.t1 | MTR_4g032240 | 86.455 | 347 | 45 | 1 | 1 | 345 | 2 | 348 | 0.0 | 592 |
| MS.gene88148.t1 | MTR_4g032300 | 68.481 | 349 | 97 | 4 | 1 | 345 | 1 | 340 | 9.56e-169 | 473 |
| MS.gene88148.t1 | MTR_4g032350 | 70.336 | 327 | 91 | 1 | 8 | 334 | 10 | 330 | 7.19e-164 | 462 |
| MS.gene88148.t1 | MTR_4g032330 | 64.179 | 67 | 23 | 1 | 280 | 345 | 17 | 83 | 7.23e-17 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88148.t1 | AT1G33970 | 56.560 | 343 | 136 | 3 | 1 | 340 | 6 | 338 | 2.06e-125 | 363 |
| MS.gene88148.t1 | AT1G33970 | 56.560 | 343 | 136 | 3 | 1 | 340 | 6 | 338 | 2.06e-125 | 363 |
| MS.gene88148.t1 | AT1G33970 | 56.560 | 343 | 136 | 3 | 1 | 340 | 6 | 338 | 2.06e-125 | 363 |
| MS.gene88148.t1 | AT1G33970 | 56.560 | 343 | 136 | 3 | 1 | 340 | 6 | 338 | 2.06e-125 | 363 |
| MS.gene88148.t1 | AT1G33970 | 57.500 | 280 | 109 | 2 | 1 | 280 | 6 | 275 | 5.70e-105 | 309 |
| MS.gene88148.t1 | AT1G33960 | 50.000 | 318 | 146 | 5 | 8 | 313 | 15 | 331 | 6.60e-91 | 276 |
| MS.gene88148.t1 | AT1G33960 | 50.000 | 318 | 146 | 5 | 8 | 313 | 39 | 355 | 1.85e-90 | 276 |
| MS.gene88148.t1 | AT1G33950 | 48.571 | 280 | 143 | 1 | 16 | 295 | 4 | 282 | 7.40e-90 | 272 |
| MS.gene88148.t1 | AT1G33930 | 46.939 | 294 | 149 | 2 | 8 | 295 | 9 | 301 | 1.48e-88 | 270 |
| MS.gene88148.t1 | AT1G33900 | 46.259 | 294 | 149 | 3 | 24 | 316 | 14 | 299 | 1.74e-88 | 269 |
| MS.gene88148.t1 | AT4G09940 | 45.141 | 319 | 165 | 7 | 12 | 323 | 27 | 342 | 6.36e-88 | 270 |
| MS.gene88148.t1 | AT4G09940 | 45.141 | 319 | 165 | 7 | 12 | 323 | 70 | 385 | 5.35e-87 | 269 |
| MS.gene88148.t1 | AT1G33950 | 48.214 | 280 | 138 | 3 | 16 | 295 | 4 | 276 | 6.89e-84 | 256 |
| MS.gene88148.t1 | AT4G09950 | 43.881 | 335 | 180 | 6 | 16 | 345 | 5 | 336 | 1.94e-82 | 254 |
| MS.gene88148.t1 | AT2G26820 | 47.687 | 281 | 138 | 4 | 29 | 306 | 6 | 280 | 1.81e-79 | 247 |
| MS.gene88148.t1 | AT2G26820 | 47.687 | 281 | 138 | 4 | 29 | 306 | 6 | 280 | 5.42e-79 | 246 |
| MS.gene88148.t1 | AT2G26820 | 45.048 | 313 | 162 | 5 | 29 | 337 | 6 | 312 | 1.49e-78 | 248 |
| MS.gene88148.t1 | AT2G26820 | 47.687 | 281 | 138 | 4 | 29 | 306 | 6 | 280 | 1.40e-77 | 246 |
| MS.gene88148.t1 | AT4G09930 | 41.210 | 347 | 190 | 7 | 1 | 345 | 1 | 335 | 2.05e-75 | 236 |
| MS.gene88148.t1 | AT1G33910 | 46.739 | 276 | 138 | 4 | 22 | 295 | 6 | 274 | 4.39e-75 | 234 |
| MS.gene88148.t1 | AT1G33890 | 44.403 | 268 | 147 | 2 | 22 | 288 | 6 | 272 | 1.15e-72 | 229 |
| MS.gene88148.t1 | AT1G33890 | 44.403 | 268 | 147 | 2 | 22 | 288 | 6 | 272 | 1.15e-72 | 229 |
| MS.gene88148.t1 | AT1G33830 | 51.196 | 209 | 102 | 0 | 31 | 239 | 11 | 219 | 5.94e-70 | 218 |
| MS.gene88148.t1 | AT1G33870 | 43.775 | 249 | 138 | 1 | 53 | 301 | 1 | 247 | 4.09e-68 | 214 |
| MS.gene88148.t1 | AT1G33880 | 42.029 | 207 | 114 | 2 | 28 | 234 | 23 | 223 | 1.61e-55 | 181 |
| MS.gene88148.t1 | AT1G33880 | 42.029 | 207 | 114 | 2 | 28 | 234 | 23 | 223 | 1.61e-55 | 181 |
| MS.gene88148.t1 | AT4G09950 | 41.111 | 270 | 151 | 6 | 81 | 345 | 7 | 273 | 2.30e-54 | 179 |
Find 73 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAGCTTGCAGACATTATT+TGG | 0.113186 | 4.3:-69009946 | MS.gene88148:CDS |
| GATACACTTGACGACTATTT+AGG | 0.229662 | 4.3:-69009859 | MS.gene88148:CDS |
| GCAAATAACTCATCTGTATA+AGG | 0.230890 | 4.3:+69008980 | None:intergenic |
| TCTGCTGGATCTGAGTTTAT+TGG | 0.235468 | 4.3:-69010075 | MS.gene88148:CDS |
| ATAAATACCTTCAAAGATTC+TGG | 0.277659 | 4.3:+69009826 | None:intergenic |
| CTGCTGGATCTGAGTTTATT+GGG | 0.278196 | 4.3:-69010074 | MS.gene88148:CDS |
| TGAAGCTCGGACAGTGGTTT+TGG | 0.303565 | 4.3:-69011241 | MS.gene88148:CDS |
| TAATAGTATTCTTGGGAAAA+AGG | 0.341397 | 4.3:-69011184 | MS.gene88148:CDS |
| GCAACCGGTAATAGTATTCT+TGG | 0.374174 | 4.3:-69011192 | MS.gene88148:CDS |
| TTTCCCAAGAATACTATTAC+CGG | 0.377468 | 4.3:+69011188 | None:intergenic |
| GAAGCTATGTTGAAGATGAT+TGG | 0.381049 | 4.3:-69011311 | MS.gene88148:CDS |
| GTGGTCTTCACGGGAGGGGA+TGG | 0.382910 | 4.3:-69009898 | MS.gene88148:CDS |
| GCAAAGAAAGATTGATTCCT+TGG | 0.383767 | 4.3:-69008835 | MS.gene88148:CDS |
| GTAGATTGAGTCAAAGTTGA+AGG | 0.398135 | 4.3:-69006845 | MS.gene88148:intron |
| GGATTATTTGAAGTTTCTGC+TGG | 0.441692 | 4.3:-69010090 | MS.gene88148:CDS |
| CTATATGATTGTGGTCTTCA+CGG | 0.447172 | 4.3:-69009908 | MS.gene88148:CDS |
| TTGGTTGGACGTACTGGCAA+TGG | 0.452994 | 4.3:-69011222 | MS.gene88148:CDS |
| AAGTCTAGGGCTAGCTCGTC+CGG | 0.453629 | 4.3:-69011156 | MS.gene88148:CDS |
| GATTGGGAATTGGCGTCAGC+TGG | 0.457386 | 4.3:-69011294 | MS.gene88148:CDS |
| TGTTGAAGATGATTGGGAAT+TGG | 0.467324 | 4.3:-69011304 | MS.gene88148:CDS |
| GCATATGCAGCAAACATATG+AGG | 0.468304 | 4.3:-69008775 | MS.gene88148:CDS |
| AGCAGAAGACAATGCAAAGT+TGG | 0.468961 | 4.3:-69006767 | MS.gene88148:CDS |
| CTCTGCAAGCGAGGTGGCAA+GGG | 0.472911 | 4.3:-69006679 | MS.gene88148:CDS |
| AAGCTATGTTGAAGATGATT+GGG | 0.476526 | 4.3:-69011310 | MS.gene88148:CDS |
| TGAGTTATTTGCAAAACTAA+AGG | 0.476964 | 4.3:-69008969 | MS.gene88148:intron |
| TGGTCTTCACGGGAGGGGAT+GGG | 0.479682 | 4.3:-69009897 | MS.gene88148:CDS |
| GGCAATGGGAAGAGTGCAAC+CGG | 0.480272 | 4.3:-69011207 | MS.gene88148:CDS |
| CAACCGGTAATAGTATTCTT+GGG | 0.491758 | 4.3:-69011191 | MS.gene88148:CDS |
| GAGCAATGAAACTGCATAGC+GGG | 0.493316 | 4.3:-69008857 | MS.gene88148:CDS |
| TCTCTTTGACAACAAGACTA+AGG | 0.507101 | 4.3:-69009080 | MS.gene88148:CDS |
| TATATGATTGTGGTCTTCAC+GGG | 0.509376 | 4.3:-69009907 | MS.gene88148:CDS |
| AAGGACGAAAAGAAGCGATC+TGG | 0.516709 | 4.3:-69009061 | MS.gene88148:CDS |
| TGGTTGGACGTACTGGCAAT+GGG | 0.520804 | 4.3:-69011221 | MS.gene88148:CDS |
| GTCAATGTTATTGACACTCC+AGG | 0.521632 | 4.3:-69011081 | MS.gene88148:intron |
| TGAATGTCCAGAATCTTTGA+AGG | 0.531693 | 4.3:-69009833 | MS.gene88148:intron |
| TGCATTGACTTTGCCATGGA+TGG | 0.537933 | 4.3:-69010036 | MS.gene88148:CDS |
| CATGGCAAAGTCAATGCACT+TGG | 0.538402 | 4.3:+69010041 | None:intergenic |
| TGATAGTATCACAGAATGGC+GGG | 0.545440 | 4.3:-69009006 | MS.gene88148:CDS |
| ACTCTGCAAGCGAGGTGGCA+AGG | 0.548096 | 4.3:-69006680 | MS.gene88148:CDS |
| GATTGTGGTCTTCACGGGAG+GGG | 0.549312 | 4.3:-69009902 | MS.gene88148:CDS |
| AGCGAATCCTCTCTTTGTGT+GGG | 0.559155 | 4.3:-69009114 | MS.gene88148:CDS |
| TAGCGAATCCTCTCTTTGTG+TGG | 0.566017 | 4.3:-69009115 | MS.gene88148:CDS |
| TGATTGTGGTCTTCACGGGA+GGG | 0.573707 | 4.3:-69009903 | MS.gene88148:CDS |
| AGCTAATGAAGCTCGGACAG+TGG | 0.575504 | 4.3:-69011247 | MS.gene88148:CDS |
| GCTAAAACATATTACTGAGA+TGG | 0.577150 | 4.3:-69008748 | MS.gene88148:intron |
| AGATTTCAGCTAATGAAGCT+CGG | 0.577288 | 4.3:-69011254 | MS.gene88148:CDS |
| AGCAGTCTGCATTTCACAAG+AGG | 0.579383 | 4.3:+69011125 | None:intergenic |
| ACGATGAAATACGAGAACTA+AGG | 0.583971 | 4.3:-69006729 | MS.gene88148:CDS |
| TGATTTGGATTTGTGATGGG+GGG | 0.588732 | 4.3:-69011333 | None:intergenic |
| AACGATTCCCACACAAAGAG+AGG | 0.592811 | 4.3:+69009107 | None:intergenic |
| AACAGATAACACCACAAGGA+TGG | 0.595518 | 4.3:+69010005 | None:intergenic |
| ATAACACCACAAGGATGGCA+TGG | 0.596816 | 4.3:+69010010 | None:intergenic |
| ATGATTGTGGTCTTCACGGG+AGG | 0.597619 | 4.3:-69009904 | MS.gene88148:CDS |
| CATGAAGAACTCTGCAAGCG+AGG | 0.599719 | 4.3:-69006688 | MS.gene88148:CDS |
| GATTGTTGACTATATGATTG+TGG | 0.602009 | 4.3:-69009917 | MS.gene88148:CDS |
| AGCGCTACAAGATCATAGAA+TGG | 0.606561 | 4.3:+69006651 | None:intergenic |
| AGTTGAAGGAGGCAACTACA+AGG | 0.610652 | 4.3:-69006831 | MS.gene88148:CDS |
| GTCAGCTGGATCAGCTAGCG+AGG | 0.622248 | 4.3:-69011280 | MS.gene88148:CDS |
| TGTTAGATCACGATTTAGTG+AGG | 0.625357 | 4.3:-69009986 | MS.gene88148:CDS |
| AACTTGATAGTATCACAGAA+TGG | 0.627543 | 4.3:-69009010 | MS.gene88148:CDS |
| AGAACTAAGGAAGCATCTTG+AGG | 0.630454 | 4.3:-69006716 | MS.gene88148:CDS |
| GATGGCATGGATACCATCCA+TGG | 0.631402 | 4.3:+69010023 | None:intergenic |
| CAGACTGCTGAGTTGAGTGA+TGG | 0.635531 | 4.3:-69011111 | MS.gene88148:CDS |
| TTCACAAGAGGAAGTGACAC+CGG | 0.638052 | 4.3:+69011137 | None:intergenic |
| GGAGGCAACTACAAGGCTTG+AGG | 0.640090 | 4.3:-69006824 | MS.gene88148:CDS |
| TGGTATCCATGCCATCCTTG+TGG | 0.652793 | 4.3:-69010016 | MS.gene88148:CDS |
| GATTGAGTCAAAGTTGAAGG+AGG | 0.654673 | 4.3:-69006842 | MS.gene88148:CDS |
| CAAGTGCATTGACTTTGCCA+TGG | 0.654919 | 4.3:-69010040 | MS.gene88148:CDS |
| GAAGAACTCTGCAAGCGAGG+TGG | 0.661750 | 4.3:-69006685 | MS.gene88148:CDS |
| TTGATAGTATCACAGAATGG+CGG | 0.664615 | 4.3:-69009007 | MS.gene88148:CDS |
| ACTAAGGAAGCATCTTGAGG+AGG | 0.684028 | 4.3:-69006713 | MS.gene88148:CDS |
| ATCTAACAGATAACACCACA+AGG | 0.685054 | 4.3:+69010001 | None:intergenic |
| GGAGCAATGAAACTGCATAG+CGG | 0.740098 | 4.3:-69008858 | MS.gene88148:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTTTAATATTTTT+TGG | - | chr4.3:69009338-69009357 | MS.gene88148:intron | 0.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | - | chr4.3:69010612-69010631 | MS.gene88148:intron | 10.0% |
| !! | TTTAATAAGGAAAATAATTA+TGG | - | chr4.3:69009706-69009725 | MS.gene88148:intron | 10.0% |
| !!! | AATTATTAATTTTTCTATAG+AGG | + | chr4.3:69008814-69008833 | None:intergenic | 10.0% |
| !!! | ATAAGTAATTTTTTTTTTGT+AGG | - | chr4.3:69010673-69010692 | MS.gene88148:intron | 10.0% |
| !!! | TAAGTAATTTTTTTTTTGTA+GGG | - | chr4.3:69010674-69010693 | MS.gene88148:intron | 10.0% |
| !! | AAAGCTATTAAAATTAAGTA+AGG | - | chr4.3:69010703-69010722 | MS.gene88148:intron | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | + | chr4.3:69010362-69010381 | None:intergenic | 15.0% |
| !! | AATATCAGTAATTAAGTAAT+GGG | - | chr4.3:69009550-69009569 | MS.gene88148:intron | 15.0% |
| !! | AATGAAAAAAAAATAATCCA+TGG | + | chr4.3:69008222-69008241 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr4.3:69010290-69010309 | None:intergenic | 15.0% |
| !! | AGATATAAGTAACAAAAATA+TGG | + | chr4.3:69010481-69010500 | None:intergenic | 15.0% |
| !! | GTATTAATACTCTTAATAAA+AGG | - | chr4.3:69008307-69008326 | MS.gene88148:intron | 15.0% |
| !! | GTTCAAATATAATTTATTCT+TGG | + | chr4.3:69010203-69010222 | None:intergenic | 15.0% |
| !! | TAACAAAATTAATTCACTTT+GGG | - | chr4.3:69010020-69010039 | MS.gene88148:CDS | 15.0% |
| !!! | AATTTTTGCGATATTTTTTT+CGG | + | chr4.3:69010446-69010465 | None:intergenic | 15.0% |
| !!! | AATTTTTTCCAGATAAAATA+AGG | + | chr4.3:69008652-69008671 | None:intergenic | 15.0% |
| !!! | ATTCAATTTTCACATTAATT+AGG | + | chr4.3:69009997-69010016 | None:intergenic | 15.0% |
| !!! | GTTTTAGATTTTATCAAAAA+AGG | - | chr4.3:69010875-69010894 | MS.gene88148:intron | 15.0% |
| !!! | TAAATTATCTCAATTTTTAC+CGG | - | chr4.3:69006986-69007005 | MS.gene88148:intron | 15.0% |
| !!! | TAATTTTGTTGATCTTTAAT+TGG | - | chr4.3:69008829-69008848 | MS.gene88148:CDS | 15.0% |
| !!! | TATTTTATCTGGAAAAAATT+AGG | - | chr4.3:69008652-69008671 | MS.gene88148:intron | 15.0% |
| !!! | TGCAATTTAATTTTAAACTT+GGG | + | chr4.3:69010777-69010796 | None:intergenic | 15.0% |
| !!! | TTATTTTCCTTATTAAAAGT+TGG | + | chr4.3:69009703-69009722 | None:intergenic | 15.0% |
| !!! | TTCTTTTTGAAAAAGTTTAA+AGG | - | chr4.3:69007434-69007453 | MS.gene88148:intron | 15.0% |
| !!! | TTGCAATTTAATTTTAAACT+TGG | + | chr4.3:69010778-69010797 | None:intergenic | 15.0% |
| !! | AAAAAACATATATCACAAAG+GGG | + | chr4.3:69008431-69008450 | None:intergenic | 20.0% |
| !! | AATAAGGAAAATAATTATGG+AGG | - | chr4.3:69009709-69009728 | MS.gene88148:intron | 20.0% |
| !! | AGAAAAAACATATATCACAA+AGG | + | chr4.3:69008433-69008452 | None:intergenic | 20.0% |
| !! | ATAAGGAAAATAATTATGGA+GGG | - | chr4.3:69009710-69009729 | MS.gene88148:intron | 20.0% |
| !! | ATTTGAACATCAAAGTTTAA+AGG | - | chr4.3:69010215-69010234 | MS.gene88148:intron | 20.0% |
| !! | CAATATCAGTAATTAAGTAA+TGG | - | chr4.3:69009549-69009568 | MS.gene88148:intron | 20.0% |
| !! | CTAACAAAATTAATTCACTT+TGG | - | chr4.3:69010019-69010038 | MS.gene88148:CDS | 20.0% |
| !! | GAAAAAACATATATCACAAA+GGG | + | chr4.3:69008432-69008451 | None:intergenic | 20.0% |
| !! | TTATAAGCTTGAACTTTATT+TGG | - | chr4.3:69011011-69011030 | MS.gene88148:intron | 20.0% |
| !! | TTCATATATTTATTGCAGAA+AGG | - | chr4.3:69009102-69009121 | MS.gene88148:CDS | 20.0% |
| !! | TTTGAACATCAAAGTTTAAA+GGG | - | chr4.3:69010216-69010235 | MS.gene88148:intron | 20.0% |
| !! | TTTGTGTTTGATCAATTATA+TGG | - | chr4.3:69011109-69011128 | MS.gene88148:CDS | 20.0% |
| !!! | AATTTTCACATTAATTAGGA+AGG | + | chr4.3:69009993-69010012 | None:intergenic | 20.0% |
| !!! | CCTTTGATAATAAAAATCAT+CGG | + | chr4.3:69007352-69007371 | None:intergenic | 20.0% |
| !!! | CTATTTCTTTTTTTATTCCA+TGG | - | chr4.3:69008202-69008221 | MS.gene88148:intron | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | - | chr4.3:69010392-69010411 | MS.gene88148:intron | 20.0% |
| !!! | TAAAGGGTTAATTATGTTTT+TGG | - | chr4.3:69010232-69010251 | MS.gene88148:intron | 20.0% |
| !!! | TATATTCTTTTTCCATTTCA+TGG | - | chr4.3:69009577-69009596 | MS.gene88148:intron | 20.0% |
| !!! | TTAGATTTTATCAAAAAAGG+AGG | - | chr4.3:69010878-69010897 | MS.gene88148:intron | 20.0% |
| !!! | TTTGTGATATATGTTTTTTC+TGG | - | chr4.3:69008432-69008451 | MS.gene88148:intron | 20.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | + | chr4.3:69010351-69010370 | None:intergenic | 25.0% |
| ! | ACATATTGAAATGTGCATTA+GGG | - | chr4.3:69010080-69010099 | MS.gene88148:CDS | 25.0% |
| ! | ATAAATACCTTCAAAGATTC+TGG | + | chr4.3:69008158-69008177 | None:intergenic | 25.0% |
| ! | ATAAATTGTCAAACCTAGTT+TGG | - | chr4.3:69009899-69009918 | MS.gene88148:CDS | 25.0% |
| ! | ATCAAACACAAAAATACTAG+GGG | + | chr4.3:69011101-69011120 | None:intergenic | 25.0% |
| ! | ATGCCAAGAATATTATTCTA+GGG | + | chr4.3:69007498-69007517 | None:intergenic | 25.0% |
| ! | CCTTGTGAATAAAAACAAAA+AGG | + | chr4.3:69007735-69007754 | None:intergenic | 25.0% |
| ! | GATCAAACACAAAAATACTA+GGG | + | chr4.3:69011102-69011121 | None:intergenic | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | - | chr4.3:69010416-69010435 | MS.gene88148:intron | 25.0% |
| ! | TAACTCATATTACAAACTCA+TGG | + | chr4.3:69010150-69010169 | None:intergenic | 25.0% |
| ! | TAATAGTATTCTTGGGAAAA+AGG | - | chr4.3:69006797-69006816 | MS.gene88148:CDS | 25.0% |
| ! | TCTTCTATCTTGTAATCTTA+TGG | - | chr4.3:69008571-69008590 | MS.gene88148:intron | 25.0% |
| ! | TGAGTTATTTGCAAAACTAA+AGG | - | chr4.3:69009012-69009031 | MS.gene88148:CDS | 25.0% |
| ! | TGATCAAACACAAAAATACT+AGG | + | chr4.3:69011103-69011122 | None:intergenic | 25.0% |
| ! | TGTTTGCATGTTGTTATAAT+TGG | - | chr4.3:69008722-69008741 | MS.gene88148:intron | 25.0% |
| ! | TTAGTGATTCGTATCAATAA+AGG | + | chr4.3:69008370-69008389 | None:intergenic | 25.0% |
| !! | ACTTGGGTTAAATATGTTTT+TGG | + | chr4.3:69010761-69010780 | None:intergenic | 25.0% |
| !! | ATAATCCTGTAAAACTTTTC+AGG | + | chr4.3:69007878-69007897 | None:intergenic | 25.0% |
| !! | CCGATGATTTTTATTATCAA+AGG | - | chr4.3:69007349-69007368 | MS.gene88148:intron | 25.0% |
| !! | CTATCTTGTTTCTTTAATCT+TGG | - | chr4.3:69009056-69009075 | MS.gene88148:CDS | 25.0% |
| !! | GATTTTTATTATCAAAGGAG+AGG | - | chr4.3:69007354-69007373 | MS.gene88148:intron | 25.0% |
| !! | TAAAGTAGATTTTGTGAGAT+GGG | - | chr4.3:69007389-69007408 | MS.gene88148:intron | 25.0% |
| !! | TTTAACCTGAAAAGTTTTAC+AGG | - | chr4.3:69007870-69007889 | MS.gene88148:intron | 25.0% |
| !! | TTTTCCAGATAAAATAAGGA+AGG | + | chr4.3:69008648-69008667 | None:intergenic | 25.0% |
| !!! | CCTTTTTGTTTTTATTCACA+AGG | - | chr4.3:69007732-69007751 | MS.gene88148:intron | 25.0% |
| !!! | TGTTTCCATTTTTGTATGTA+CGG | - | chr4.3:69009676-69009695 | MS.gene88148:intron | 25.0% |
| AAATACGAGAGAAAAATGAC+AGG | + | chr4.3:69008618-69008637 | None:intergenic | 30.0% | |
| AAATCTCCAAATGGTTCAAA+TGG | + | chr4.3:69008484-69008503 | None:intergenic | 30.0% | |
| AAATTCCCATTTGAACCATT+TGG | - | chr4.3:69008475-69008494 | MS.gene88148:intron | 30.0% | |
| AAGCTATGTTGAAGATGATT+GGG | - | chr4.3:69006671-69006690 | MS.gene88148:CDS | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | + | chr4.3:69010275-69010294 | None:intergenic | 30.0% | |
| AAGTAAGGACTAAACTTAGA+AGG | - | chr4.3:69010718-69010737 | MS.gene88148:intron | 30.0% | |
| AATACGAGAGAAAAATGACA+GGG | + | chr4.3:69008617-69008636 | None:intergenic | 30.0% | |
| AATCTCCAAATGGTTCAAAT+GGG | + | chr4.3:69008483-69008502 | None:intergenic | 30.0% | |
| AGTTATGAAAACTGCAAGTT+GGG | - | chr4.3:69010165-69010184 | MS.gene88148:intron | 30.0% | |
| ATCTCATTGTTTAATCCTTG+TGG | + | chr4.3:69009742-69009761 | None:intergenic | 30.0% | |
| ATGCCCTAGAATAATATTCT+TGG | - | chr4.3:69007492-69007511 | MS.gene88148:intron | 30.0% | |
| ATGTCTGTTACAAATTCACA+AGG | + | chr4.3:69009619-69009638 | None:intergenic | 30.0% | |
| ATTAGTCGAGTTTAAACTGA+GGG | - | chr4.3:69007210-69007229 | MS.gene88148:intron | 30.0% | |
| CATCTTGATCATAAATCTCA+AGG | - | chr4.3:69009927-69009946 | MS.gene88148:CDS | 30.0% | |
| CATGCCAAGAATATTATTCT+AGG | + | chr4.3:69007499-69007518 | None:intergenic | 30.0% | |
| GAAAAAGGTCTTTAAGTCTA+GGG | - | chr4.3:69006812-69006831 | MS.gene88148:CDS | 30.0% | |
| GACATATTGAAATGTGCATT+AGG | - | chr4.3:69010079-69010098 | MS.gene88148:CDS | 30.0% | |
| GCAAATAACTCATCTGTATA+AGG | + | chr4.3:69009004-69009023 | None:intergenic | 30.0% | |
| GCTAAAACATATTACTGAGA+TGG | - | chr4.3:69009233-69009252 | MS.gene88148:intron | 30.0% | |
| GTTATTTGCAAAACTAAAGG+TGG | - | chr4.3:69009015-69009034 | MS.gene88148:CDS | 30.0% | |
| TACAATACACCAAATATGGT+GGG | - | chr4.3:69007660-69007679 | MS.gene88148:intron | 30.0% | |
| TATATACATGCATTACTGCA+TGG | - | chr4.3:69009377-69009396 | MS.gene88148:intron | 30.0% | |
| TATTACAAACTCATGGAATC+AGG | + | chr4.3:69010143-69010162 | None:intergenic | 30.0% | |
| TCTGTCATGAGAATATTTAG+AGG | + | chr4.3:69011045-69011064 | None:intergenic | 30.0% | |
| TCTTGTGTAAAAACATGGTA+AGG | - | chr4.3:69007632-69007651 | MS.gene88148:intron | 30.0% | |
| TGATTCGTATCAATAAAGGA+GGG | + | chr4.3:69008366-69008385 | None:intergenic | 30.0% | |
| TTAAAACAGTGATACACAGA+AGG | - | chr4.3:69008502-69008521 | MS.gene88148:intron | 30.0% | |
| TTAAAGGAGCTTTACAGATT+TGG | - | chr4.3:69007450-69007469 | MS.gene88148:intron | 30.0% | |
| TTATTATCAAAGGAGAGGTT+GGG | - | chr4.3:69007359-69007378 | MS.gene88148:intron | 30.0% | |
| TTTATTATCAAAGGAGAGGT+TGG | - | chr4.3:69007358-69007377 | MS.gene88148:intron | 30.0% | |
| TTTCCCAAGAATACTATTAC+CGG | + | chr4.3:69006796-69006815 | None:intergenic | 30.0% | |
| ! | AAACAATGTTCGAACTTTTG+AGG | - | chr4.3:69007106-69007125 | MS.gene88148:intron | 30.0% |
| ! | AACAATGTTCGAACTTTTGA+GGG | - | chr4.3:69007107-69007126 | MS.gene88148:intron | 30.0% |
| ! | AACTTGATAGTATCACAGAA+TGG | - | chr4.3:69008971-69008990 | MS.gene88148:CDS | 30.0% |
| ! | CAAGTTTAGAACACTATGAA+AGG | + | chr4.3:69010578-69010597 | None:intergenic | 30.0% |
| ! | GATTGTTGACTATATGATTG+TGG | - | chr4.3:69008064-69008083 | MS.gene88148:intron | 30.0% |
| ! | GCTTGAGTATCTAGAATTAT+AGG | - | chr4.3:69008771-69008790 | MS.gene88148:CDS | 30.0% |
| ! | GTAAAGTAGATTTTGTGAGA+TGG | - | chr4.3:69007388-69007407 | MS.gene88148:intron | 30.0% |
| ! | TAGAAGGTCGCAATTTTATA+GGG | - | chr4.3:69010734-69010753 | MS.gene88148:intron | 30.0% |
| ! | TCATTGCTGTTAGCTATTAT+TGG | - | chr4.3:69009478-69009497 | MS.gene88148:intron | 30.0% |
| ! | TTAGAAGGTCGCAATTTTAT+AGG | - | chr4.3:69010733-69010752 | MS.gene88148:intron | 30.0% |
| ! | TTCTTTTGAATGTTCTTCCA+AGG | + | chr4.3:69009166-69009185 | None:intergenic | 30.0% |
| ! | TTTTCCATTTCATGGTTCAT+AGG | - | chr4.3:69009585-69009604 | MS.gene88148:intron | 30.0% |
| !! | ATTCACAAGGATTGATTTGA+GGG | - | chr4.3:69007536-69007555 | MS.gene88148:intron | 30.0% |
| !! | CAAACTTTTCAAGAAGTAGA+AGG | + | chr4.3:69007844-69007863 | None:intergenic | 30.0% |
| !! | CACTGTTTTAAATCTCCAAA+TGG | + | chr4.3:69008493-69008512 | None:intergenic | 30.0% |
| !! | TTACCATGTTTTTACACAAG+AGG | + | chr4.3:69007633-69007652 | None:intergenic | 30.0% |
| !!! | AATGCCTTCCTTATTTTATC+TGG | - | chr4.3:69008641-69008660 | MS.gene88148:intron | 30.0% |
| !!! | ATTCTTGGCATGATGTTTTT+TGG | - | chr4.3:69007507-69007526 | MS.gene88148:intron | 30.0% |
| !!! | CGAACATTGTTTTATTTCCA+GGG | + | chr4.3:69007098-69007117 | None:intergenic | 30.0% |
| !!! | GAGTGTAGAATTTTTTTGCA+AGG | + | chr4.3:69010319-69010338 | None:intergenic | 30.0% |
| !!! | TCGAACATTGTTTTATTTCC+AGG | + | chr4.3:69007099-69007118 | None:intergenic | 30.0% |
| !!! | TTTTTGGAATGTCATTCACA+AGG | - | chr4.3:69007523-69007542 | MS.gene88148:intron | 30.0% |
| AAGAGCAAAACAACCAAGAA+AGG | + | chr4.3:69008555-69008574 | None:intergenic | 35.0% | |
| AATTTACTTCTCCTGCTAAG+AGG | + | chr4.3:69010925-69010944 | None:intergenic | 35.0% | |
| ACGATGAAATACGAGAACTA+AGG | - | chr4.3:69011252-69011271 | MS.gene88148:CDS | 35.0% | |
| AGATTTCAGCTAATGAAGCT+CGG | - | chr4.3:69006727-69006746 | MS.gene88148:CDS | 35.0% | |
| AGGACAAATGAACTCTATGT+AGG | - | chr4.3:69008522-69008541 | MS.gene88148:intron | 35.0% | |
| AGGTAAATACAAGCCAACTT+AGG | - | chr4.3:69006920-69006939 | MS.gene88148:intron | 35.0% | |
| ATACGAGAGAAAAATGACAG+GGG | + | chr4.3:69008616-69008635 | None:intergenic | 35.0% | |
| ATCATCTCCTTTGTGTGTAA+AGG | + | chr4.3:69007276-69007295 | None:intergenic | 35.0% | |
| ATCTAACAGATAACACCACA+AGG | + | chr4.3:69007983-69008002 | None:intergenic | 35.0% | |
| ATGTCACACCATACCATAAA+TGG | + | chr4.3:69010064-69010083 | None:intergenic | 35.0% | |
| ATTTACTTCTCCTGCTAAGA+GGG | + | chr4.3:69010924-69010943 | None:intergenic | 35.0% | |
| ATTTGCAAAACTAAAGGTGG+AGG | - | chr4.3:69009018-69009037 | MS.gene88148:CDS | 35.0% | |
| CAACCGGTAATAGTATTCTT+GGG | - | chr4.3:69006790-69006809 | MS.gene88148:CDS | 35.0% | |
| CACATTAATTAGGAAGGAGT+TGG | + | chr4.3:69009987-69010006 | None:intergenic | 35.0% | |
| CAGCAATGAATGCAACTAAT+TGG | + | chr4.3:69009467-69009486 | None:intergenic | 35.0% | |
| CATAACTCATTCAAAGCCAT+AGG | + | chr4.3:69007788-69007807 | None:intergenic | 35.0% | |
| CATCCTACAAAACACAGATA+TGG | + | chr4.3:69007170-69007189 | None:intergenic | 35.0% | |
| CTATATGATTGTGGTCTTCA+CGG | - | chr4.3:69008073-69008092 | MS.gene88148:intron | 35.0% | |
| GAAGCTATGTTGAAGATGAT+TGG | - | chr4.3:69006670-69006689 | MS.gene88148:CDS | 35.0% | |
| GAGTTATGAAAACTGCAAGT+TGG | - | chr4.3:69010164-69010183 | MS.gene88148:intron | 35.0% | |
| GATACACTTGACGACTATTT+AGG | - | chr4.3:69008122-69008141 | MS.gene88148:intron | 35.0% | |
| GCAAGTAGATCTTGATCAAT+TGG | - | chr4.3:69009869-69009888 | MS.gene88148:CDS | 35.0% | |
| GGAAAAAGGTCTTTAAGTCT+AGG | - | chr4.3:69006811-69006830 | MS.gene88148:CDS | 35.0% | |
| GTACAATACACCAAATATGG+TGG | - | chr4.3:69007659-69007678 | MS.gene88148:intron | 35.0% | |
| GTAGATTGAGTCAAAGTTGA+AGG | - | chr4.3:69011136-69011155 | MS.gene88148:CDS | 35.0% | |
| GTGATTCGTATCAATAAAGG+AGG | + | chr4.3:69008367-69008386 | None:intergenic | 35.0% | |
| TAAAAACAAAAAGGCCAACC+CGG | + | chr4.3:69007726-69007745 | None:intergenic | 35.0% | |
| TAGGTAGGGGAAATTGTATT+GGG | - | chr4.3:69009812-69009831 | MS.gene88148:intron | 35.0% | |
| TATATGATTGTGGTCTTCAC+GGG | - | chr4.3:69008074-69008093 | MS.gene88148:intron | 35.0% | |
| TCAAAACCCTTTACACACAA+AGG | - | chr4.3:69007266-69007285 | MS.gene88148:intron | 35.0% | |
| TCATCTCCTTTGTGTGTAAA+GGG | + | chr4.3:69007275-69007294 | None:intergenic | 35.0% | |
| TCTCTTTGACAACAAGACTA+AGG | - | chr4.3:69008901-69008920 | MS.gene88148:intron | 35.0% | |
| TGAATGTCCAGAATCTTTGA+AGG | - | chr4.3:69008148-69008167 | MS.gene88148:intron | 35.0% | |
| TGCGTACAATACACCAAATA+TGG | - | chr4.3:69007656-69007675 | MS.gene88148:intron | 35.0% | |
| TGGGAATGAAATTTGATGTG+TGG | - | chr4.3:69007408-69007427 | MS.gene88148:intron | 35.0% | |
| TGTCACACCATACCATAAAT+GGG | + | chr4.3:69010063-69010082 | None:intergenic | 35.0% | |
| TGTTAGATCACGATTTAGTG+AGG | - | chr4.3:69007995-69008014 | MS.gene88148:intron | 35.0% | |
| TGTTGAAGATGATTGGGAAT+TGG | - | chr4.3:69006677-69006696 | MS.gene88148:CDS | 35.0% | |
| TTACAAATTCACAAGGCCAT+TGG | + | chr4.3:69009612-69009631 | None:intergenic | 35.0% | |
| TTAGTCGAGTTTAAACTGAG+GGG | - | chr4.3:69007211-69007230 | MS.gene88148:intron | 35.0% | |
| TTGGTCCGTACATACAAAAA+TGG | + | chr4.3:69009684-69009703 | None:intergenic | 35.0% | |
| ! | GATTAGTCGAGTTTAAACTG+AGG | - | chr4.3:69007209-69007228 | MS.gene88148:intron | 35.0% |
| ! | GCAAAGAAAGATTGATTCCT+TGG | - | chr4.3:69009146-69009165 | MS.gene88148:intron | 35.0% |
| ! | GGATTATTTGAAGTTTCTGC+TGG | - | chr4.3:69007891-69007910 | MS.gene88148:intron | 35.0% |
| ! | GTACGGACCAACTTTTAATA+AGG | - | chr4.3:69009693-69009712 | MS.gene88148:intron | 35.0% |
| ! | TACAAGGTCGCAATTTTGTA+GGG | + | chr4.3:69010259-69010278 | None:intergenic | 35.0% |
| ! | TGTCCATATCTGTGTTTTGT+AGG | - | chr4.3:69007164-69007183 | MS.gene88148:intron | 35.0% |
| ! | TTACAAGGTCGCAATTTTGT+AGG | + | chr4.3:69010260-69010279 | None:intergenic | 35.0% |
| ! | TTGATAGTATCACAGAATGG+CGG | - | chr4.3:69008974-69008993 | MS.gene88148:CDS | 35.0% |
| !! | CACAAAGGGGCATATTTTAA+AGG | + | chr4.3:69008418-69008437 | None:intergenic | 35.0% |
| !! | CATTCACAAGGATTGATTTG+AGG | - | chr4.3:69007535-69007554 | MS.gene88148:intron | 35.0% |
| !! | GATCTACTTGCATTTTGATC+AGG | + | chr4.3:69009860-69009879 | None:intergenic | 35.0% |
| !! | TAAGTTGGCTTGTATTTACC+TGG | + | chr4.3:69006921-69006940 | None:intergenic | 35.0% |
| !! | TGTAGGTTATTAGCCTTTCT+TGG | - | chr4.3:69008539-69008558 | MS.gene88148:intron | 35.0% |
| !! | TTCACAAGGATTGATTTGAG+GGG | - | chr4.3:69007537-69007556 | MS.gene88148:intron | 35.0% |
| !! | TTGTGTGTAAAGGGTTTTGA+AGG | + | chr4.3:69007266-69007285 | None:intergenic | 35.0% |
| !!! | GTAAAGGGTTTTGAAGGAAT+GGG | + | chr4.3:69007260-69007279 | None:intergenic | 35.0% |
| !!! | GTTTTGACTTGATGTCACTT+AGG | - | chr4.3:69009502-69009521 | MS.gene88148:intron | 35.0% |
| !!! | TGTAAAGGGTTTTGAAGGAA+TGG | + | chr4.3:69007261-69007280 | None:intergenic | 35.0% |
| AACAGATAACACCACAAGGA+TGG | + | chr4.3:69007979-69007998 | None:intergenic | 40.0% | |
| AAGAGGACCCATTTATGGTA+TGG | - | chr4.3:69010053-69010072 | MS.gene88148:CDS | 40.0% | |
| AGCAGAAGACAATGCAAAGT+TGG | - | chr4.3:69011214-69011233 | MS.gene88148:CDS | 40.0% | |
| ATAAAGGAGGGAGTTCAAGA+AGG | + | chr4.3:69008354-69008373 | None:intergenic | 40.0% | |
| ATACAAGCCAACTTAGGCTA+TGG | - | chr4.3:69006926-69006945 | MS.gene88148:intron | 40.0% | |
| ATGCCAAAAACAACAGACAC+CGG | + | chr4.3:69007008-69007027 | None:intergenic | 40.0% | |
| ATGGTAAGAGGACCCATTTA+TGG | - | chr4.3:69010048-69010067 | MS.gene88148:CDS | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+TGG | - | chr4.3:69007627-69007646 | MS.gene88148:intron | 40.0% | |
| CTAGGTAGGGGAAATTGTAT+TGG | - | chr4.3:69009811-69009830 | MS.gene88148:intron | 40.0% | |
| CTGCTGGATCTGAGTTTATT+GGG | - | chr4.3:69007907-69007926 | MS.gene88148:intron | 40.0% | |
| GATTGAGTCAAAGTTGAAGG+AGG | - | chr4.3:69011139-69011158 | MS.gene88148:CDS | 40.0% | |
| GCAACCGGTAATAGTATTCT+TGG | - | chr4.3:69006789-69006808 | MS.gene88148:CDS | 40.0% | |
| GCATATGCAGCAAACATATG+AGG | - | chr4.3:69009206-69009225 | MS.gene88148:intron | 40.0% | |
| GTCAATGTTATTGACACTCC+AGG | - | chr4.3:69006900-69006919 | MS.gene88148:intron | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr4.3:69007582-69007601 | MS.gene88148:intron | 40.0% | |
| TAACTCTCCATAGCCTAAGT+TGG | + | chr4.3:69006936-69006955 | None:intergenic | 40.0% | |
| TAATTCACTTTGGGCTGAGA+TGG | - | chr4.3:69010029-69010048 | MS.gene88148:CDS | 40.0% | |
| TAGGGGAAATTGTATTGGGA+AGG | - | chr4.3:69009816-69009835 | MS.gene88148:intron | 40.0% | |
| TAGTTATTTGCGCTTCCTGT+AGG | - | chr4.3:69009770-69009789 | MS.gene88148:intron | 40.0% | |
| TATGGACACCAAAAACGAGA+TGG | + | chr4.3:69007152-69007171 | None:intergenic | 40.0% | |
| TCAAGATGTGATGCCAAACT+AGG | + | chr4.3:69009915-69009934 | None:intergenic | 40.0% | |
| TCATGTGACTGAAAGGTCAT+GGG | - | chr4.3:69007589-69007608 | MS.gene88148:intron | 40.0% | |
| TCTGCTGGATCTGAGTTTAT+TGG | - | chr4.3:69007906-69007925 | MS.gene88148:intron | 40.0% | |
| TGATAGTATCACAGAATGGC+GGG | - | chr4.3:69008975-69008994 | MS.gene88148:CDS | 40.0% | |
| TGCATTAGGGATCAAAATGC+AGG | - | chr4.3:69010093-69010112 | MS.gene88148:intron | 40.0% | |
| TGGACCTATGAACCATGAAA+TGG | + | chr4.3:69009592-69009611 | None:intergenic | 40.0% | |
| TTCATGGTTCATAGGTCCAA+TGG | - | chr4.3:69009593-69009612 | MS.gene88148:intron | 40.0% | |
| ! | AACCTTTGATAGCTAGGTAG+GGG | - | chr4.3:69009799-69009818 | MS.gene88148:intron | 40.0% |
| ! | AGAACCTTTGATAGCTAGGT+AGG | - | chr4.3:69009797-69009816 | MS.gene88148:intron | 40.0% |
| ! | AGTCAGAACCTTTGATAGCT+AGG | - | chr4.3:69009793-69009812 | MS.gene88148:intron | 40.0% |
| ! | ATGAAAACTGCAAGTTGGGT+GGG | - | chr4.3:69010169-69010188 | MS.gene88148:intron | 40.0% |
| ! | GAACCTTTGATAGCTAGGTA+GGG | - | chr4.3:69009798-69009817 | MS.gene88148:intron | 40.0% |
| ! | TAAGCACTCCATCTCGTTTT+TGG | - | chr4.3:69007141-69007160 | MS.gene88148:intron | 40.0% |
| ! | TAGACACGTGCTTCCATTTT+TGG | - | chr4.3:69009643-69009662 | MS.gene88148:intron | 40.0% |
| ! | TATGAAAACTGCAAGTTGGG+TGG | - | chr4.3:69010168-69010187 | MS.gene88148:intron | 40.0% |
| !! | AGAACTAAGGAAGCATCTTG+AGG | - | chr4.3:69011265-69011284 | MS.gene88148:CDS | 40.0% |
| !! | AGACACGTGCTTCCATTTTT+GGG | - | chr4.3:69009644-69009663 | MS.gene88148:intron | 40.0% |
| !! | ATTGATTTGAGGGGTAACCT+TGG | - | chr4.3:69007546-69007565 | MS.gene88148:intron | 40.0% |
| !! | GATTAGTCTAGTTTGAACCC+TGG | - | chr4.3:69007078-69007097 | MS.gene88148:intron | 40.0% |
| !!! | TTACCGGTGTCTGTTGTTTT+TGG | - | chr4.3:69007002-69007021 | MS.gene88148:intron | 40.0% |
| AACGATTCCCACACAAAGAG+AGG | + | chr4.3:69008877-69008896 | None:intergenic | 45.0% | |
| AAGGACGAAAAGAAGCGATC+TGG | - | chr4.3:69008920-69008939 | MS.gene88148:intron | 45.0% | |
| AGCAGTCTGCATTTCACAAG+AGG | + | chr4.3:69006859-69006878 | None:intergenic | 45.0% | |
| AGCGAATCCTCTCTTTGTGT+GGG | - | chr4.3:69008867-69008886 | MS.gene88148:intron | 45.0% | |
| AGTTGAAGGAGGCAACTACA+AGG | - | chr4.3:69011150-69011169 | MS.gene88148:CDS | 45.0% | |
| ATAACACCACAAGGATGGCA+TGG | + | chr4.3:69007974-69007993 | None:intergenic | 45.0% | |
| CATGGCAAAGTCAATGCACT+TGG | + | chr4.3:69007943-69007962 | None:intergenic | 45.0% | |
| CCTGAAACACGTAACACCTA+TGG | - | chr4.3:69007769-69007788 | MS.gene88148:intron | 45.0% | |
| CGCAGCTTGCAGACATTATT+TGG | - | chr4.3:69008035-69008054 | MS.gene88148:intron | 45.0% | |
| CGTTTGTGTTAGTGCTTCGT+AGG | - | chr4.3:69007031-69007050 | MS.gene88148:intron | 45.0% | |
| GAGCAATGAAACTGCATAGC+GGG | - | chr4.3:69009124-69009143 | MS.gene88148:intron | 45.0% | |
| GGAGCAATGAAACTGCATAG+CGG | - | chr4.3:69009123-69009142 | MS.gene88148:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+TGG | - | chr4.3:69007588-69007607 | MS.gene88148:intron | 45.0% | |
| TAGCGAATCCTCTCTTTGTG+TGG | - | chr4.3:69008866-69008885 | MS.gene88148:intron | 45.0% | |
| TTCACAAGAGGAAGTGACAC+CGG | + | chr4.3:69006847-69006866 | None:intergenic | 45.0% | |
| TTCCCCTACCTAGCTATCAA+AGG | + | chr4.3:69009804-69009823 | None:intergenic | 45.0% | |
| ! | ACGAAGCACTAACACAAACG+CGG | + | chr4.3:69007031-69007050 | None:intergenic | 45.0% |
| ! | CCATAGGTGTTACGTGTTTC+AGG | + | chr4.3:69007772-69007791 | None:intergenic | 45.0% |
| ! | TCAAAGGTTCTGACTCCTAC+AGG | + | chr4.3:69009788-69009807 | None:intergenic | 45.0% |
| ! | TGAAAACTGCAAGTTGGGTG+GGG | - | chr4.3:69010170-69010189 | MS.gene88148:intron | 45.0% |
| !! | ACTAAGGAAGCATCTTGAGG+AGG | - | chr4.3:69011268-69011287 | MS.gene88148:CDS | 45.0% |
| !! | CAAGTGCATTGACTTTGCCA+TGG | - | chr4.3:69007941-69007960 | MS.gene88148:intron | 45.0% |
| !! | TATGGAGGGTATCTTCCACA+AGG | - | chr4.3:69009724-69009743 | MS.gene88148:intron | 45.0% |
| !! | TGCATTGACTTTGCCATGGA+TGG | - | chr4.3:69007945-69007964 | MS.gene88148:intron | 45.0% |
| !!! | GGGTTTTGAAGGAATGGGAA+TGG | + | chr4.3:69007255-69007274 | None:intergenic | 45.0% |
| !! | TTAAAATAAAATAAAAACTA+CGG | + | chr4.3:69006969-69006988 | None:intergenic | 5.0% |
| AAGGAGGCTTGTATGTGCAG+CGG | - | chr4.3:69010894-69010913 | MS.gene88148:intron | 50.0% | |
| AAGGTCATGGGTTCAAGTGC+TGG | - | chr4.3:69007601-69007620 | MS.gene88148:intron | 50.0% | |
| ACAGCACACACGCCCAAAAA+TGG | + | chr4.3:69009659-69009678 | None:intergenic | 50.0% | |
| AGCTAATGAAGCTCGGACAG+TGG | - | chr4.3:69006734-69006753 | MS.gene88148:CDS | 50.0% | |
| ATGATTGTGGTCTTCACGGG+AGG | - | chr4.3:69008077-69008096 | MS.gene88148:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr4.3:69007566-69007585 | None:intergenic | 50.0% | |
| CATGAAGAACTCTGCAAGCG+AGG | - | chr4.3:69011293-69011312 | MS.gene88148:CDS | 50.0% | |
| CTTTGGGCTGAGATGGTAAG+AGG | - | chr4.3:69010036-69010055 | MS.gene88148:CDS | 50.0% | |
| GATGGCATGGATACCATCCA+TGG | + | chr4.3:69007961-69007980 | None:intergenic | 50.0% | |
| TGATTGTGGTCTTCACGGGA+GGG | - | chr4.3:69008078-69008097 | MS.gene88148:intron | 50.0% | |
| TGGTATCCATGCCATCCTTG+TGG | - | chr4.3:69007965-69007984 | MS.gene88148:intron | 50.0% | |
| ! | CAAAGGAGAGGTTGGGTTGT+TGG | - | chr4.3:69007366-69007385 | MS.gene88148:intron | 50.0% |
| ! | CAGACTGCTGAGTTGAGTGA+TGG | - | chr4.3:69006870-69006889 | MS.gene88148:intron | 50.0% |
| ! | GAAAACTGCAAGTTGGGTGG+GGG | - | chr4.3:69010171-69010190 | MS.gene88148:intron | 50.0% |
| ! | TGAAGCTCGGACAGTGGTTT+TGG | - | chr4.3:69006740-69006759 | MS.gene88148:CDS | 50.0% |
| ! | TGGTTGGACGTACTGGCAAT+GGG | - | chr4.3:69006760-69006779 | MS.gene88148:CDS | 50.0% |
| ! | TTGGTTGGACGTACTGGCAA+TGG | - | chr4.3:69006759-69006778 | MS.gene88148:CDS | 50.0% |
| !!! | GTGGTTTTGGTTGGACGTAC+TGG | - | chr4.3:69006753-69006772 | MS.gene88148:CDS | 50.0% |
| ACTAAAGCTCCCGCATACGC+AGG | + | chr4.3:69007700-69007719 | None:intergenic | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | + | chr4.3:69007699-69007718 | None:intergenic | 55.0% | |
| GAAGAACTCTGCAAGCGAGG+TGG | - | chr4.3:69011296-69011315 | MS.gene88148:CDS | 55.0% | |
| GATTGGGAATTGGCGTCAGC+TGG | - | chr4.3:69006687-69006706 | MS.gene88148:CDS | 55.0% | |
| GATTGTGGTCTTCACGGGAG+GGG | - | chr4.3:69008079-69008098 | MS.gene88148:intron | 55.0% | |
| GGAAGGGGTCCCACCATATT+TGG | + | chr4.3:69007672-69007691 | None:intergenic | 55.0% | |
| GGAGGCAACTACAAGGCTTG+AGG | - | chr4.3:69011157-69011176 | MS.gene88148:CDS | 55.0% | |
| ! | AATATGGTGGGACCCCTTCC+CGG | - | chr4.3:69007672-69007691 | MS.gene88148:intron | 55.0% |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr4.3:69007704-69007723 | MS.gene88148:intron | 55.0% |
| ! | GGCAATGGGAAGAGTGCAAC+CGG | - | chr4.3:69006774-69006793 | MS.gene88148:CDS | 55.0% |
| !! | AAGTCTAGGGCTAGCTCGTC+CGG | - | chr4.3:69006825-69006844 | MS.gene88148:CDS | 55.0% |
| !!! | GCTCGGACAGTGGTTTTGGT+TGG | - | chr4.3:69006744-69006763 | MS.gene88148:CDS | 55.0% |
| ACTCTGCAAGCGAGGTGGCA+AGG | - | chr4.3:69011301-69011320 | MS.gene88148:CDS | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr4.3:69007555-69007574 | MS.gene88148:intron | 60.0% | |
| CAGCGGTAAGCCCTCTTAGC+AGG | - | chr4.3:69010911-69010930 | MS.gene88148:intron | 60.0% | |
| CTCTGCAAGCGAGGTGGCAA+GGG | - | chr4.3:69011302-69011321 | MS.gene88148:CDS | 60.0% | |
| GTCAGCTGGATCAGCTAGCG+AGG | - | chr4.3:69006701-69006720 | MS.gene88148:CDS | 60.0% | |
| TGGTCTTCACGGGAGGGGAT+GGG | - | chr4.3:69008084-69008103 | MS.gene88148:intron | 60.0% | |
| ! | ACTGCAAGTTGGGTGGGGGA+AGG | - | chr4.3:69010175-69010194 | MS.gene88148:intron | 60.0% |
| ! | GGAGCTTTAGTGCACCGGGT+TGG | - | chr4.3:69007709-69007728 | MS.gene88148:intron | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr4.3:69007705-69007724 | MS.gene88148:intron | 60.0% |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr4.3:69007687-69007706 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr4.3:69007687-69007706 | MS.gene88148:intron | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr4.3:69007688-69007707 | None:intergenic | 65.0% | |
| GTGGTCTTCACGGGAGGGGA+TGG | - | chr4.3:69008083-69008102 | MS.gene88148:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr4.3:69007688-69007707 | MS.gene88148:intron | 65.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr4.3:69007689-69007708 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr4.3:69007693-69007712 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr4.3:69007694-69007713 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 69006663 | 69011340 | 69006663 | ID=MS.gene88148 |
| chr4.3 | mRNA | 69006663 | 69011340 | 69006663 | ID=MS.gene88148.t1;Parent=MS.gene88148 |
| chr4.3 | exon | 69011082 | 69011340 | 69011082 | ID=MS.gene88148.t1.exon1;Parent=MS.gene88148.t1 |
| chr4.3 | CDS | 69011082 | 69011340 | 69011082 | ID=cds.MS.gene88148.t1;Parent=MS.gene88148.t1 |
| chr4.3 | exon | 69009834 | 69010111 | 69009834 | ID=MS.gene88148.t1.exon2;Parent=MS.gene88148.t1 |
| chr4.3 | CDS | 69009834 | 69010111 | 69009834 | ID=cds.MS.gene88148.t1;Parent=MS.gene88148.t1 |
| chr4.3 | exon | 69008970 | 69009134 | 69008970 | ID=MS.gene88148.t1.exon3;Parent=MS.gene88148.t1 |
| chr4.3 | CDS | 69008970 | 69009134 | 69008970 | ID=cds.MS.gene88148.t1;Parent=MS.gene88148.t1 |
| chr4.3 | exon | 69008749 | 69008883 | 69008749 | ID=MS.gene88148.t1.exon4;Parent=MS.gene88148.t1 |
| chr4.3 | CDS | 69008749 | 69008883 | 69008749 | ID=cds.MS.gene88148.t1;Parent=MS.gene88148.t1 |
| chr4.3 | exon | 69006663 | 69006863 | 69006663 | ID=MS.gene88148.t1.exon5;Parent=MS.gene88148.t1 |
| chr4.3 | CDS | 69006663 | 69006863 | 69006663 | ID=cds.MS.gene88148.t1;Parent=MS.gene88148.t1 |
| Gene Sequence |
| Protein sequence |
