Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91523.t1 | XP_003621182.2 | 88.4 | 775 | 44 | 5 | 1 | 759 | 1 | 745 | 0.00E+00 | 1151 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91523.t1 | Q2HVS4 | 88.4 | 775 | 44 | 5 | 1 | 759 | 1 | 745 | 0.0e+00 | 1151.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene91523 | 0.810834 | 9.46E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene91523 | 0.840786 | 7.05E-58 | -1.69E-46 |
| MS.gene049419 | MS.gene91523 | -0.804227 | 2.39E-49 | -1.69E-46 |
| MS.gene049669 | MS.gene91523 | 0.810357 | 1.20E-50 | -1.69E-46 |
| MS.gene049786 | MS.gene91523 | 0.805785 | 1.13E-49 | -1.69E-46 |
| MS.gene049801 | MS.gene91523 | 0.808041 | 3.76E-50 | -1.69E-46 |
| MS.gene050105 | MS.gene91523 | 0.816151 | 6.41E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene91523 | 0.801731 | 7.84E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene91523 | 0.80816 | 3.55E-50 | -1.69E-46 |
| MS.gene050605 | MS.gene91523 | 0.801349 | 9.39E-49 | -1.69E-46 |
| MS.gene050826 | MS.gene91523 | 0.807251 | 5.54E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene91523 | 0.809057 | 2.28E-50 | -1.69E-46 |
| MS.gene051122 | MS.gene91523 | 0.840488 | 8.44E-58 | -1.69E-46 |
| MS.gene051368 | MS.gene91523 | 0.805726 | 1.16E-49 | -1.69E-46 |
| MS.gene051452 | MS.gene91523 | 0.812806 | 3.52E-51 | -1.69E-46 |
| MS.gene051541 | MS.gene91523 | 0.810045 | 1.40E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene91523 | 0.815034 | 1.14E-51 | -1.69E-46 |
| MS.gene052389 | MS.gene91523 | 0.80092 | 1.15E-48 | -1.69E-46 |
| MS.gene052426 | MS.gene91523 | 0.810896 | 9.18E-51 | -1.69E-46 |
| MS.gene052586 | MS.gene91523 | 0.838165 | 3.38E-57 | -1.69E-46 |
| MS.gene052674 | MS.gene91523 | 0.84829 | 6.73E-60 | -1.69E-46 |
| MS.gene052675 | MS.gene91523 | 0.844828 | 5.94E-59 | -1.69E-46 |
| MS.gene052677 | MS.gene91523 | 0.846776 | 1.76E-59 | -1.69E-46 |
| MS.gene052954 | MS.gene91523 | 0.830096 | 3.56E-55 | -1.69E-46 |
| MS.gene053166 | MS.gene91523 | 0.809086 | 2.25E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene91523 | 0.837669 | 4.54E-57 | -1.69E-46 |
| MS.gene054479 | MS.gene91523 | 0.854106 | 1.54E-61 | -1.69E-46 |
| MS.gene055701 | MS.gene91523 | 0.878284 | 3.18E-69 | -1.69E-46 |
| MS.gene056480 | MS.gene91523 | 0.811423 | 7.05E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene91523 | 0.828692 | 7.81E-55 | -1.69E-46 |
| MS.gene057026 | MS.gene91523 | 0.821602 | 3.70E-53 | -1.69E-46 |
| MS.gene057156 | MS.gene91523 | -0.821082 | 4.88E-53 | -1.69E-46 |
| MS.gene05761 | MS.gene91523 | 0.841614 | 4.27E-58 | -1.69E-46 |
| MS.gene058081 | MS.gene91523 | 0.820523 | 6.56E-53 | -1.69E-46 |
| MS.gene058146 | MS.gene91523 | 0.817452 | 3.27E-52 | -1.69E-46 |
| MS.gene058223 | MS.gene91523 | -0.824023 | 1.01E-53 | -1.69E-46 |
| MS.gene058429 | MS.gene91523 | 0.814865 | 1.24E-51 | -1.69E-46 |
| MS.gene058503 | MS.gene91523 | 0.80822 | 3.45E-50 | -1.69E-46 |
| MS.gene058595 | MS.gene91523 | 0.813722 | 2.22E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene91523 | 0.811672 | 6.23E-51 | -1.69E-46 |
| MS.gene059952 | MS.gene91523 | 0.81478 | 1.29E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene91523 | 0.81804 | 2.41E-52 | -1.69E-46 |
| MS.gene06010 | MS.gene91523 | 0.814855 | 1.25E-51 | -1.69E-46 |
| MS.gene060296 | MS.gene91523 | 0.806188 | 9.29E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene91523 | 0.825139 | 5.52E-54 | -1.69E-46 |
| MS.gene06052 | MS.gene91523 | 0.819382 | 1.20E-52 | -1.69E-46 |
| MS.gene060683 | MS.gene91523 | 0.804349 | 2.25E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene91523 | 0.808208 | 3.47E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene91523 | 0.830079 | 3.59E-55 | -1.69E-46 |
| MS.gene060850 | MS.gene91523 | 0.842289 | 2.83E-58 | -1.69E-46 |
| MS.gene060851 | MS.gene91523 | 0.849067 | 4.10E-60 | -1.69E-46 |
| MS.gene060852 | MS.gene91523 | 0.84751 | 1.10E-59 | -1.69E-46 |
| MS.gene060869 | MS.gene91523 | 0.800937 | 1.14E-48 | -1.69E-46 |
| MS.gene060870 | MS.gene91523 | 0.808981 | 2.37E-50 | -1.69E-46 |
| MS.gene060879 | MS.gene91523 | 0.820176 | 7.88E-53 | -1.69E-46 |
| MS.gene060932 | MS.gene91523 | 0.803275 | 3.77E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene91523 | 0.820057 | 8.39E-53 | -1.69E-46 |
| MS.gene06121 | MS.gene91523 | 0.816568 | 5.17E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91523.t1 | MTR_7g010160 | 89.175 | 776 | 36 | 6 | 1 | 759 | 1 | 745 | 0.0 | 1264 |
| MS.gene91523.t1 | MTR_5g040600 | 44.050 | 479 | 225 | 13 | 302 | 758 | 451 | 908 | 7.53e-107 | 347 |
| MS.gene91523.t1 | MTR_8g467380 | 42.175 | 377 | 193 | 10 | 380 | 737 | 452 | 822 | 1.08e-73 | 256 |
| MS.gene91523.t1 | MTR_8g467390 | 36.184 | 304 | 174 | 8 | 380 | 673 | 70 | 363 | 6.22e-46 | 168 |
| MS.gene91523.t1 | MTR_4g005350 | 35.366 | 328 | 183 | 14 | 435 | 758 | 122 | 424 | 4.81e-39 | 150 |
| MS.gene91523.t1 | MTR_6g084440 | 35.433 | 254 | 146 | 7 | 509 | 759 | 363 | 601 | 1.63e-25 | 112 |
| MS.gene91523.t1 | MTR_6g084440 | 35.547 | 256 | 145 | 8 | 509 | 759 | 363 | 603 | 2.07e-24 | 108 |
| MS.gene91523.t1 | MTR_8g104270 | 33.977 | 259 | 144 | 11 | 509 | 757 | 318 | 559 | 2.38e-20 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91523.t1 | AT5G39785 | 54.768 | 409 | 164 | 9 | 368 | 758 | 200 | 605 | 4.19e-142 | 431 |
| MS.gene91523.t1 | AT5G39785 | 54.768 | 409 | 164 | 9 | 368 | 758 | 200 | 605 | 4.19e-142 | 431 |
| MS.gene91523.t1 | AT5G39785 | 54.768 | 409 | 164 | 9 | 368 | 758 | 200 | 605 | 4.19e-142 | 431 |
| MS.gene91523.t1 | AT5G39785 | 54.390 | 410 | 165 | 10 | 368 | 758 | 200 | 606 | 1.38e-139 | 424 |
| MS.gene91523.t1 | AT5G39785 | 51.613 | 434 | 164 | 10 | 368 | 758 | 200 | 630 | 1.89e-136 | 417 |
| MS.gene91523.t1 | AT1G69610 | 41.645 | 389 | 206 | 8 | 376 | 758 | 218 | 591 | 1.07e-80 | 270 |
| MS.gene91523.t1 | AT1G69610 | 41.645 | 389 | 206 | 8 | 376 | 758 | 262 | 635 | 6.08e-80 | 269 |
| MS.gene91523.t1 | AT1G69610 | 41.645 | 389 | 206 | 8 | 376 | 758 | 263 | 636 | 6.55e-80 | 269 |
| MS.gene91523.t1 | AT3G20260 | 34.234 | 333 | 190 | 9 | 435 | 758 | 124 | 436 | 1.27e-39 | 152 |
| MS.gene91523.t1 | AT3G01175 | 29.395 | 347 | 190 | 10 | 435 | 759 | 263 | 576 | 2.29e-27 | 118 |
| MS.gene91523.t1 | AT1G73850 | 32.308 | 260 | 157 | 8 | 509 | 758 | 383 | 633 | 9.07e-26 | 113 |
| MS.gene91523.t1 | AT1G73850 | 32.308 | 260 | 157 | 8 | 509 | 758 | 383 | 633 | 9.07e-26 | 113 |
Find 102 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAGAAGATTTGGACTTTA+AGG | 0.109617 | 7.1:+85271303 | MS.gene91523:CDS |
| CTGTAACTTCTGTAGAATTT+TGG | 0.152576 | 7.1:-85271685 | None:intergenic |
| TCAAATTTCAATATCAAAAT+TGG | 0.181073 | 7.1:+85270618 | MS.gene91523:CDS |
| AGCATAGAAAGTTTGGATTT+TGG | 0.203412 | 7.1:+85271334 | MS.gene91523:CDS |
| CTTCAAGTTCCTGTTATAAA+AGG | 0.208394 | 7.1:+85273604 | MS.gene91523:CDS |
| AAGAATCCATTAGAACAATT+TGG | 0.248534 | 7.1:+85274578 | MS.gene91523:CDS |
| AATTAATCTAACAATTAATT+AGG | 0.249365 | 7.1:-85275611 | None:intergenic |
| TACAGATTCTATAAGTTCTT+TGG | 0.255079 | 7.1:+85271204 | MS.gene91523:CDS |
| GAAACGCCAAATTGTTCTAA+TGG | 0.262300 | 7.1:-85274584 | None:intergenic |
| TACCTAAAGCATACATCTTT+TGG | 0.269762 | 7.1:-85271741 | None:intergenic |
| ATGAAAAGGCTTTGAAGATA+TGG | 0.282269 | 7.1:+85273428 | MS.gene91523:CDS |
| TGAGGAAAGCATAGAAAGTT+TGG | 0.290433 | 7.1:+85271327 | MS.gene91523:CDS |
| TGGGACACTTGTGTCTTTCT+TGG | 0.296379 | 7.1:+85273386 | MS.gene91523:CDS |
| CATGAAGAGGTGGGAGTGTT+TGG | 0.309021 | 7.1:+85270524 | MS.gene91523:CDS |
| TTCTTGGGAATTTCTTCATT+GGG | 0.310775 | 7.1:+85273402 | MS.gene91523:CDS |
| GGTTATGAGCCGGACGATTT+CGG | 0.316787 | 7.1:+85271355 | MS.gene91523:CDS |
| AGAAGAAAATGTAGAAGATT+TGG | 0.317470 | 7.1:+85271294 | MS.gene91523:CDS |
| TTTCTTGGGAATTTCTTCAT+TGG | 0.318127 | 7.1:+85273401 | MS.gene91523:CDS |
| TTCTGAATCACCAAGGATTA+TGG | 0.320123 | 7.1:+85271597 | MS.gene91523:CDS |
| CTCAATTTCATGATTATCAA+TGG | 0.334150 | 7.1:-85270420 | None:intergenic |
| ACAGCAAAATTTGAAGCCTT+TGG | 0.338929 | 7.1:-85270776 | None:intergenic |
| TCTCTTATGAACTTCTTCAT+TGG | 0.346346 | 7.1:-85273334 | None:intergenic |
| CTCTTATGAACTTCTTCATT+GGG | 0.348346 | 7.1:-85273333 | None:intergenic |
| ATAGTTTCTTTAGACGTAAT+AGG | 0.349436 | 7.1:+85273296 | MS.gene91523:CDS |
| TTCGAATAAGCTCAAGAATT+CGG | 0.352648 | 7.1:+85271039 | MS.gene91523:CDS |
| GGGACACTTGTGTCTTTCTT+GGG | 0.372197 | 7.1:+85273387 | MS.gene91523:CDS |
| CGACACACTTTGGGAGCATC+AGG | 0.375614 | 7.1:+85271504 | MS.gene91523:CDS |
| TACCAAAAGATGTATGCTTT+AGG | 0.376310 | 7.1:+85271739 | MS.gene91523:CDS |
| TTCGGATAAGCTCAAGAATT+CGG | 0.389776 | 7.1:+85270952 | MS.gene91523:CDS |
| AACTTGAAGAAGTTTCTTCA+TGG | 0.394542 | 7.1:-85273590 | None:intergenic |
| ATATGGGAATCTGATCAATA+TGG | 0.395070 | 7.1:+85273445 | MS.gene91523:CDS |
| ATTGCGCATACAGGAGGTTT+CGG | 0.402197 | 7.1:+85270934 | MS.gene91523:CDS |
| ACAATTTGGCGTTTCATAAG+AGG | 0.404653 | 7.1:+85274592 | MS.gene91523:CDS |
| TTGAAGAAGGTTAAAGCTAC+TGG | 0.411572 | 7.1:+85271553 | MS.gene91523:CDS |
| TGGTTTACCTACTATCTTTG+AGG | 0.423238 | 7.1:+85271573 | MS.gene91523:CDS |
| TCGGAACAAGAGGTTGTTGA+TGG | 0.427227 | 7.1:+85271058 | MS.gene91523:CDS |
| GAAAGAAAATTACGCGCATA+TGG | 0.429075 | 7.1:-85271151 | None:intergenic |
| TGAAAAGGCTTTGAAGATAT+GGG | 0.437992 | 7.1:+85273429 | MS.gene91523:CDS |
| TTCAAATCTTCCATAATCCT+TGG | 0.444245 | 7.1:-85271607 | None:intergenic |
| GAACCGGTTCGACACACTTT+GGG | 0.448738 | 7.1:+85271495 | MS.gene91523:CDS |
| TAAATCTTTGTAGAAGAACT+TGG | 0.453472 | 7.1:-85273510 | None:intergenic |
| TCTTCATTGGGAATATGAAA+AGG | 0.453775 | 7.1:+85273414 | MS.gene91523:CDS |
| ATTATATAGTGACTTGGAAA+TGG | 0.455257 | 7.1:+85273357 | MS.gene91523:CDS |
| AACTACAGATTTCGATACAT+TGG | 0.456260 | 7.1:+85271261 | MS.gene91523:CDS |
| ACTACAGATTTCGATACATT+GGG | 0.462337 | 7.1:+85271262 | MS.gene91523:CDS |
| TCAACCCTTGGACCTTGAAA+AGG | 0.462599 | 7.1:-85273544 | None:intergenic |
| AACAAGTATGAGTTTATCTC+AGG | 0.467675 | 7.1:+85270725 | MS.gene91523:CDS |
| GCTCCCAAAGTGTGTCGAAC+CGG | 0.473141 | 7.1:-85271498 | None:intergenic |
| CGAACCGGTTCGACACACTT+TGG | 0.473629 | 7.1:+85271494 | MS.gene91523:CDS |
| GCCAACGGAACATTATCATT+CGG | 0.479479 | 7.1:-85270818 | None:intergenic |
| TCAGAATCCTCAAAGATAGT+AGG | 0.480405 | 7.1:-85271580 | None:intergenic |
| GAAAATTCAGCACGACAAAT+CGG | 0.480910 | 7.1:-85270398 | None:intergenic |
| AGATTTGGACTTTAAGGATG+AGG | 0.489615 | 7.1:+85271309 | MS.gene91523:CDS |
| TCTTCTTCTCCGAAATCGTC+CGG | 0.490632 | 7.1:-85271364 | None:intergenic |
| GAAGATATAATGAATGAGCT+TGG | 0.496345 | 7.1:+85271388 | MS.gene91523:CDS |
| TACTAGCATGTCACTTGTGA+TGG | 0.502737 | 7.1:-85274545 | None:intergenic |
| AGAAGGTTCAATGAAGTAGC+TGG | 0.505395 | 7.1:+85273472 | MS.gene91523:CDS |
| ACTAGAAGTTGTGAATCAGC+AGG | 0.508732 | 7.1:-85274679 | None:intergenic |
| TAAATTCTTGGATGAACCAA+AGG | 0.510104 | 7.1:+85270760 | MS.gene91523:CDS |
| GCTTCTAACGGATCTTCAAA+AGG | 0.510840 | 7.1:+85274705 | MS.gene91523:CDS |
| TATAGGTCTAATGAAGTCAA+AGG | 0.515309 | 7.1:+85273201 | MS.gene91523:intron |
| TTGATCTCGATGAGTCGAAC+CGG | 0.518613 | 7.1:+85271479 | MS.gene91523:CDS |
| GAAGGAAAAGAGATTGAGAG+AGG | 0.519928 | 7.1:+85275364 | MS.gene91523:intron |
| CTCAGAAAAGTTACATGGAG+TGG | 0.520389 | 7.1:+85271012 | MS.gene91523:CDS |
| TTTGATAGAACAGCTGAAGA+TGG | 0.521278 | 7.1:+85271528 | MS.gene91523:CDS |
| TTATGGAAGATTTGAAGCCA+TGG | 0.526012 | 7.1:+85271614 | MS.gene91523:CDS |
| TGATACTGTTTCACATGAAG+AGG | 0.536152 | 7.1:+85270511 | MS.gene91523:CDS |
| ATTAGAAGAAGAAATCAGAC+AGG | 0.540963 | 7.1:+85271414 | MS.gene91523:CDS |
| GAGAATAGTGAAGAGGTTGT+TGG | 0.542023 | 7.1:+85270881 | MS.gene91523:CDS |
| TCCGAATGATAATGTTCCGT+TGG | 0.543662 | 7.1:+85270817 | MS.gene91523:CDS |
| GCTGAAGATGGAATTGAAGA+AGG | 0.548234 | 7.1:+85271540 | MS.gene91523:CDS |
| CGGAACAAGAGGTTGTTGAT+GGG | 0.550736 | 7.1:+85271059 | MS.gene91523:CDS |
| GCTCAAGAATTCGGAACAAG+AGG | 0.553712 | 7.1:+85270961 | MS.gene91523:CDS |
| GTTATCTGAGAATAGTGAAG+AGG | 0.554208 | 7.1:+85270874 | MS.gene91523:CDS |
| TAACAAACCAGCTGAATCAT+CGG | 0.557117 | 7.1:-85270855 | None:intergenic |
| TACTGTTTCACATGAAGAGG+TGG | 0.559153 | 7.1:+85270514 | MS.gene91523:CDS |
| CAAGGGTTGAAAATTATGCT+AGG | 0.564322 | 7.1:+85273557 | MS.gene91523:CDS |
| TGCTGATTCACAACTTCTAG+TGG | 0.570157 | 7.1:+85274681 | MS.gene91523:CDS |
| GCTCAAGAATTCGGAACAAG+AGG | 0.573553 | 7.1:+85271048 | MS.gene91523:CDS |
| AATGTCTCAGAAAAGTTACA+TGG | 0.576721 | 7.1:+85271007 | MS.gene91523:CDS |
| CTCAGAAAAGTTACACGAAG+AGG | 0.579058 | 7.1:+85271099 | MS.gene91523:CDS |
| TCTATAAGTTCTTTGGACGA+TGG | 0.582023 | 7.1:+85271211 | MS.gene91523:CDS |
| GTAGAGTGTTGAATATGTCA+AGG | 0.586380 | 7.1:+85275492 | MS.gene91523:CDS |
| ATGGTTCTACATGTATCCTA+CGG | 0.587088 | 7.1:-85275574 | None:intergenic |
| TGACTTGGAAATGGTCTATG+TGG | 0.588630 | 7.1:+85273366 | MS.gene91523:CDS |
| AAGAGAATTATATAGTGACT+TGG | 0.594503 | 7.1:+85273351 | MS.gene91523:CDS |
| ACTTCTAGTGGAGCTTCTAA+CGG | 0.594743 | 7.1:+85274693 | MS.gene91523:CDS |
| CTGATCAATATGGATTGAGA+AGG | 0.598782 | 7.1:+85273455 | MS.gene91523:CDS |
| CATGTGGCCGATGATTCAGC+TGG | 0.611802 | 7.1:+85270848 | MS.gene91523:CDS |
| AGAAAAGTTACATGGAGTGG+AGG | 0.616618 | 7.1:+85271015 | MS.gene91523:CDS |
| TTATTTGTTGCAGAAGACAA+AGG | 0.623970 | 7.1:+85274478 | MS.gene91523:intron |
| AGAAAAGTTACACGAAGAGG+AGG | 0.626156 | 7.1:+85271102 | MS.gene91523:CDS |
| ATGTCTTAAAGAACAACATG+TGG | 0.633494 | 7.1:+85274645 | MS.gene91523:CDS |
| TGTTGCAGAAGACAAAGGCA+AGG | 0.634467 | 7.1:+85274483 | MS.gene91523:intron |
| TTGAGGATTCTGAATCACCA+AGG | 0.644133 | 7.1:+85271590 | MS.gene91523:CDS |
| ACTGTTTCACATGAAGAGGT+GGG | 0.656938 | 7.1:+85270515 | MS.gene91523:CDS |
| CTAGAAGTTGTGAATCAGCA+GGG | 0.660177 | 7.1:-85274678 | None:intergenic |
| TAACGACTGATCAACTAGCA+TGG | 0.666424 | 7.1:+85275516 | MS.gene91523:CDS |
| GACTTGGAAATGGTCTATGT+GGG | 0.668369 | 7.1:+85273367 | MS.gene91523:CDS |
| AATAGTGAAGAGGTTGTTGG+TGG | 0.673028 | 7.1:+85270884 | MS.gene91523:CDS |
| ATCACATGCATTCTTCCACG+TGG | 0.740785 | 7.1:+85273268 | MS.gene91523:CDS |
| AAGAAACTATTAATGCCACG+TGG | 0.745035 | 7.1:-85273283 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTATATGAAATAATTA+GGG | - | chr7.1:85272772-85272791 | None:intergenic | 10.0% |
| !! | TATTGTTATATGAAATAATT+AGG | - | chr7.1:85272773-85272792 | None:intergenic | 10.0% |
| !! | TTATATACATAAAAACAAAA+GGG | - | chr7.1:85273014-85273033 | None:intergenic | 10.0% |
| !! | TTGAAAAAATAAAATTTCTT+TGG | - | chr7.1:85272874-85272893 | None:intergenic | 10.0% |
| !! | TTTATATACATAAAAACAAA+AGG | - | chr7.1:85273015-85273034 | None:intergenic | 10.0% |
| !!! | TTTCTTGTATATATTTTTAT+AGG | + | chr7.1:85273184-85273203 | MS.gene91523:intron | 10.0% |
| !! | AAAATTAAGCATAATGTAAA+AGG | - | chr7.1:85273122-85273141 | None:intergenic | 15.0% |
| !! | ATAGATAAATGATCAAAATA+AGG | + | chr7.1:85274866-85274885 | MS.gene91523:intron | 15.0% |
| !! | ATCGAAATATTAATAATTGA+AGG | + | chr7.1:85274011-85274030 | MS.gene91523:intron | 15.0% |
| !! | TCAAATTTCAATATCAAAAT+TGG | + | chr7.1:85270618-85270637 | MS.gene91523:CDS | 15.0% |
| !! | TCAATTAAATGAATATTTGA+AGG | - | chr7.1:85272256-85272275 | None:intergenic | 15.0% |
| !!! | AAATTGATTCTTGAAATTAT+AGG | + | chr7.1:85274065-85274084 | MS.gene91523:intron | 15.0% |
| !!! | CAAGTATATATTTTGTTAAT+TGG | - | chr7.1:85272921-85272940 | None:intergenic | 15.0% |
| !!! | TCAATGTATTTAAAATGTTA+GGG | - | chr7.1:85271933-85271952 | None:intergenic | 15.0% |
| !!! | TTCAATGTATTTAAAATGTT+AGG | - | chr7.1:85271934-85271953 | None:intergenic | 15.0% |
| !!! | TTTTTACTCTTTTCTATTAT+TGG | + | chr7.1:85272205-85272224 | MS.gene91523:intron | 15.0% |
| !! | AATGAAAATTCATCGTATTT+CGG | + | chr7.1:85274898-85274917 | MS.gene91523:intron | 20.0% |
| !! | GTAATAATTGACAAGTATTA+GGG | + | chr7.1:85272824-85272843 | MS.gene91523:intron | 20.0% |
| !! | TGTAATAATTGACAAGTATT+AGG | + | chr7.1:85272823-85272842 | MS.gene91523:intron | 20.0% |
| !! | TTCTATTAATCCTATTAAGT+CGG | - | chr7.1:85273958-85273977 | None:intergenic | 20.0% |
| !!! | AAAGAGTTTTAGTAAATTCT+TGG | + | chr7.1:85270748-85270767 | MS.gene91523:CDS | 20.0% |
| !!! | AAAGTAGTGATTTTGAAAAA+AGG | + | chr7.1:85270681-85270700 | MS.gene91523:CDS | 20.0% |
| !!! | AAGTAGTGATTTTGAAAAAA+GGG | + | chr7.1:85270682-85270701 | MS.gene91523:CDS | 20.0% |
| !!! | AATAATCCAAGTTTGATTTT+TGG | + | chr7.1:85274991-85275010 | MS.gene91523:intron | 20.0% |
| !!! | AATTTTTCATCAATTTTCCA+TGG | - | chr7.1:85271634-85271653 | None:intergenic | 20.0% |
| !!! | ACTTTTTAATGGTTTAGATA+AGG | - | chr7.1:85272076-85272095 | None:intergenic | 20.0% |
| !!! | AGAATTTTATGAATGTTTTG+AGG | + | chr7.1:85270481-85270500 | MS.gene91523:CDS | 20.0% |
| !!! | ATTCAAACTTTTTGTTAAGT+TGG | + | chr7.1:85274157-85274176 | MS.gene91523:intron | 20.0% |
| !!! | ATTTTGTTAATTGGTGTTTA+AGG | - | chr7.1:85272912-85272931 | None:intergenic | 20.0% |
| !!! | CTTTAAAAGTAATGTGAATA+TGG | + | chr7.1:85273633-85273652 | MS.gene91523:intron | 20.0% |
| !!! | GAATTGAAAATGATTTTAGT+GGG | - | chr7.1:85273228-85273247 | None:intergenic | 20.0% |
| !!! | GGTAAATAAATTTAAAGCAA+TGG | - | chr7.1:85271784-85271803 | None:intergenic | 20.0% |
| !!! | GTTTGTTAACTATAATAAGT+AGG | + | chr7.1:85272453-85272472 | MS.gene91523:intron | 20.0% |
| !!! | TACTATACCATTACTTTTAA+AGG | - | chr7.1:85273676-85273695 | None:intergenic | 20.0% |
| !!! | TCTATTATTGGTTTTGTTTA+TGG | + | chr7.1:85272217-85272236 | MS.gene91523:intron | 20.0% |
| !!! | TGAATTGAAAATGATTTTAG+TGG | - | chr7.1:85273229-85273248 | None:intergenic | 20.0% |
| !!! | TTGGAGTTTTAAAATATCAA+CGG | - | chr7.1:85272540-85272559 | None:intergenic | 20.0% |
| ! | AAGAATCCATTAGAACAATT+TGG | + | chr7.1:85274578-85274597 | MS.gene91523:CDS | 25.0% |
| ! | AAGAGAATTATATAGTGACT+TGG | + | chr7.1:85273351-85273370 | MS.gene91523:CDS | 25.0% |
| ! | AATGAAAATTGTCATGAACA+AGG | - | chr7.1:85272028-85272047 | None:intergenic | 25.0% |
| ! | ACACAACTTCTTATAAGAAA+AGG | - | chr7.1:85275303-85275322 | None:intergenic | 25.0% |
| ! | AGAAGAAAATGTAGAAGATT+TGG | + | chr7.1:85271294-85271313 | MS.gene91523:CDS | 25.0% |
| ! | AGACTTATATGGCTATATTT+AGG | - | chr7.1:85272427-85272446 | None:intergenic | 25.0% |
| ! | ATAGTTTCTTTAGACGTAAT+AGG | + | chr7.1:85273296-85273315 | MS.gene91523:CDS | 25.0% |
| ! | ATTGATGAAAAATTTCAGCA+AGG | + | chr7.1:85271640-85271659 | MS.gene91523:CDS | 25.0% |
| ! | CAAACAAGAAAAGACTTATA+TGG | - | chr7.1:85272438-85272457 | None:intergenic | 25.0% |
| ! | CTCAATTTCATGATTATCAA+TGG | - | chr7.1:85270423-85270442 | None:intergenic | 25.0% |
| ! | GTGTAGTAGTAATTAGATAT+TGG | - | chr7.1:85272559-85272578 | None:intergenic | 25.0% |
| ! | TAAATCTTTGTAGAAGAACT+TGG | - | chr7.1:85273513-85273532 | None:intergenic | 25.0% |
| ! | TAATTAGTGTAAATATGCGT+CGG | - | chr7.1:85273806-85273825 | None:intergenic | 25.0% |
| ! | TACAGATTCTATAAGTTCTT+TGG | + | chr7.1:85271204-85271223 | MS.gene91523:CDS | 25.0% |
| ! | TATCTATGCAATTGAAACTT+TGG | - | chr7.1:85274853-85274872 | None:intergenic | 25.0% |
| ! | TGAACTTTGAATAATCTATG+TGG | + | chr7.1:85273096-85273115 | MS.gene91523:intron | 25.0% |
| ! | TTAAGTGTAACTATATGTGT+CGG | + | chr7.1:85272666-85272685 | MS.gene91523:intron | 25.0% |
| ! | TTAGGAAAAAGTAAGAATGA+TGG | - | chr7.1:85275596-85275615 | None:intergenic | 25.0% |
| ! | TTAGTAAGACATTACACAAT+AGG | - | chr7.1:85275137-85275156 | None:intergenic | 25.0% |
| ! | TTTAATGGTTTAGATAAGGT+AGG | - | chr7.1:85272072-85272091 | None:intergenic | 25.0% |
| !! | ACTTTTGTGTCACATATAAT+AGG | - | chr7.1:85272157-85272176 | None:intergenic | 25.0% |
| !! | ATCAAACTTGGATTATTTTC+CGG | - | chr7.1:85274988-85275007 | None:intergenic | 25.0% |
| !! | ATTATATAGTGACTTGGAAA+TGG | + | chr7.1:85273357-85273376 | MS.gene91523:CDS | 25.0% |
| !! | ATTTTTCCTCTTCTTTTTCT+AGG | - | chr7.1:85270586-85270605 | None:intergenic | 25.0% |
| !! | CTTTTGTGTCACATATAATA+GGG | - | chr7.1:85272156-85272175 | None:intergenic | 25.0% |
| !! | GTGCTTAAAAAGCATATTTA+GGG | + | chr7.1:85274920-85274939 | MS.gene91523:intron | 25.0% |
| !! | TAAACCATTAAAAAGTGTAG+AGG | + | chr7.1:85272080-85272099 | MS.gene91523:intron | 25.0% |
| !! | TGATTTTCGCAAATTATTAG+CGG | + | chr7.1:85273828-85273847 | MS.gene91523:intron | 25.0% |
| !! | TTTTTCTGAGTCAAAAATTG+AGG | + | chr7.1:85270448-85270467 | MS.gene91523:CDS | 25.0% |
| !!! | AATTTTAGTGAGGAATTGAA+GGG | + | chr7.1:85270647-85270666 | MS.gene91523:CDS | 25.0% |
| !!! | AGTAGTGATTTTGAAAAAAG+GGG | + | chr7.1:85270683-85270702 | MS.gene91523:CDS | 25.0% |
| !!! | GTGAATCACTATTTGATTTT+TGG | - | chr7.1:85274136-85274155 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTGAATTTGCAGA+AGG | + | chr7.1:85275346-85275365 | MS.gene91523:intron | 25.0% |
| !!! | TTTGTTATTGCAACAAAAAG+TGG | + | chr7.1:85272288-85272307 | MS.gene91523:intron | 25.0% |
| AAAGGGTCATAGAAAAATTG+TGG | - | chr7.1:85272997-85273016 | None:intergenic | 30.0% | |
| AACAAGTATGAGTTTATCTC+AGG | + | chr7.1:85270725-85270744 | MS.gene91523:CDS | 30.0% | |
| AACATAACTTTCCAAGAGAA+AGG | - | chr7.1:85273077-85273096 | None:intergenic | 30.0% | |
| AACTACAGATTTCGATACAT+TGG | + | chr7.1:85271261-85271280 | MS.gene91523:CDS | 30.0% | |
| AACTTGAAGAAGTTTCTTCA+TGG | - | chr7.1:85273593-85273612 | None:intergenic | 30.0% | |
| AATGTCTCAGAAAAGTTACA+TGG | + | chr7.1:85271007-85271026 | MS.gene91523:CDS | 30.0% | |
| ACTACAGATTTCGATACATT+GGG | + | chr7.1:85271262-85271281 | MS.gene91523:CDS | 30.0% | |
| AGAAGAGGAAAAATCAAAGT+TGG | + | chr7.1:85270592-85270611 | MS.gene91523:CDS | 30.0% | |
| AGATCCTAATTGTACTTGTT+AGG | + | chr7.1:85275088-85275107 | MS.gene91523:intron | 30.0% | |
| AGTGCATGATCTATTATCAA+CGG | + | chr7.1:85274330-85274349 | MS.gene91523:intron | 30.0% | |
| ATATGGGAATCTGATCAATA+TGG | + | chr7.1:85273445-85273464 | MS.gene91523:CDS | 30.0% | |
| ATGTCTTAAAGAACAACATG+TGG | + | chr7.1:85274645-85274664 | MS.gene91523:CDS | 30.0% | |
| ATTAGAAGAAGAAATCAGAC+AGG | + | chr7.1:85271414-85271433 | MS.gene91523:CDS | 30.0% | |
| CAAAATATTGTTGGAAGAGT+TGG | + | chr7.1:85274946-85274965 | MS.gene91523:intron | 30.0% | |
| CTCACATATAGAACTGTATA+TGG | - | chr7.1:85274422-85274441 | None:intergenic | 30.0% | |
| CTCTTATGAACTTCTTCATT+GGG | - | chr7.1:85273336-85273355 | None:intergenic | 30.0% | |
| CTGAGTTTCTCTCAAATTAA+GGG | - | chr7.1:85272798-85272817 | None:intergenic | 30.0% | |
| CTGTAAATATAGTTACAGCA+GGG | + | chr7.1:85274226-85274245 | MS.gene91523:intron | 30.0% | |
| CTGTAACTATATTTACAGCA+GGG | - | chr7.1:85274224-85274243 | None:intergenic | 30.0% | |
| GAAGATATAATGAATGAGCT+TGG | + | chr7.1:85271388-85271407 | MS.gene91523:CDS | 30.0% | |
| TAAATTCTTGGATGAACCAA+AGG | + | chr7.1:85270760-85270779 | MS.gene91523:CDS | 30.0% | |
| TACCAAAAGATGTATGCTTT+AGG | + | chr7.1:85271739-85271758 | MS.gene91523:CDS | 30.0% | |
| TATAGGTCTAATGAAGTCAA+AGG | + | chr7.1:85273201-85273220 | MS.gene91523:intron | 30.0% | |
| TATGAAACATGGATACTTCT+CGG | - | chr7.1:85272733-85272752 | None:intergenic | 30.0% | |
| TCAACTAACCAGATTTAGTA+GGG | - | chr7.1:85272112-85272131 | None:intergenic | 30.0% | |
| TCTCTTATGAACTTCTTCAT+TGG | - | chr7.1:85273337-85273356 | None:intergenic | 30.0% | |
| TCTGAGTTTCTCTCAAATTA+AGG | - | chr7.1:85272799-85272818 | None:intergenic | 30.0% | |
| TCTTCATTGGGAATATGAAA+AGG | + | chr7.1:85273414-85273433 | MS.gene91523:CDS | 30.0% | |
| TGAGACAAAATAGTTCATCA+TGG | + | chr7.1:85274438-85274457 | MS.gene91523:intron | 30.0% | |
| TGAGAGAAAAAGTAAAGAAC+TGG | - | chr7.1:85275452-85275471 | None:intergenic | 30.0% | |
| TGTAGAAGATTTGGACTTTA+AGG | + | chr7.1:85271303-85271322 | MS.gene91523:CDS | 30.0% | |
| TGTCTGTATATATGCTTCAT+AGG | + | chr7.1:85273900-85273919 | MS.gene91523:intron | 30.0% | |
| TTATTGCAACAAAAAGTGGT+AGG | + | chr7.1:85272292-85272311 | MS.gene91523:intron | 30.0% | |
| TTCAAATCTTCCATAATCCT+TGG | - | chr7.1:85271610-85271629 | None:intergenic | 30.0% | |
| TTCGAATAAGCTCAAGAATT+CGG | + | chr7.1:85271039-85271058 | MS.gene91523:CDS | 30.0% | |
| TTCTTGGGAATTTCTTCATT+GGG | + | chr7.1:85273402-85273421 | MS.gene91523:CDS | 30.0% | |
| TTTCCCTAACAAGTACAATT+AGG | - | chr7.1:85275095-85275114 | None:intergenic | 30.0% | |
| TTTCTTGGGAATTTCTTCAT+TGG | + | chr7.1:85273401-85273420 | MS.gene91523:CDS | 30.0% | |
| ! | AACTTTTTATGTCACATGCT+TGG | + | chr7.1:85272344-85272363 | MS.gene91523:intron | 30.0% |
| ! | AAGTAGGAACACTATTCTTT+TGG | + | chr7.1:85272469-85272488 | MS.gene91523:intron | 30.0% |
| ! | AAGTTCTCACCTTTTATAAC+AGG | - | chr7.1:85273616-85273635 | None:intergenic | 30.0% |
| ! | ACTAAATTGACCGACTTAAT+AGG | + | chr7.1:85273945-85273964 | MS.gene91523:intron | 30.0% |
| ! | AGATCAATTTTGTAAACCGT+AGG | + | chr7.1:85275558-85275577 | MS.gene91523:CDS | 30.0% |
| ! | AGCATAGAAAGTTTGGATTT+TGG | + | chr7.1:85271334-85271353 | MS.gene91523:CDS | 30.0% |
| ! | ATAGAGAATGAACCTTTTCA+AGG | + | chr7.1:85273532-85273551 | MS.gene91523:CDS | 30.0% |
| ! | CAACTCTTCCAACAATATTT+TGG | - | chr7.1:85274948-85274967 | None:intergenic | 30.0% |
| ! | CTGTAACTTCTGTAGAATTT+TGG | - | chr7.1:85271688-85271707 | None:intergenic | 30.0% |
| ! | CTTCAAGTTCCTGTTATAAA+AGG | + | chr7.1:85273604-85273623 | MS.gene91523:CDS | 30.0% |
| ! | GATCCTAATTGTACTTGTTA+GGG | + | chr7.1:85275089-85275108 | MS.gene91523:intron | 30.0% |
| ! | GGTGCTTAAAAAGCATATTT+AGG | + | chr7.1:85274919-85274938 | MS.gene91523:intron | 30.0% |
| ! | GGTTAGACCTTTAAAAGTAA+TGG | + | chr7.1:85273666-85273685 | MS.gene91523:intron | 30.0% |
| ! | TACCTAAAGCATACATCTTT+TGG | - | chr7.1:85271744-85271763 | None:intergenic | 30.0% |
| ! | TTATTTGTTGCAGAAGACAA+AGG | + | chr7.1:85274478-85274497 | MS.gene91523:intron | 30.0% |
| ! | TTTTGACCTAGAAAAAGAAG+AGG | + | chr7.1:85270577-85270596 | MS.gene91523:CDS | 30.0% |
| !! | ACTTTTAAAGGTCTAACCAA+TGG | - | chr7.1:85273664-85273683 | None:intergenic | 30.0% |
| !! | ATGAAAAGGCTTTGAAGATA+TGG | + | chr7.1:85273428-85273447 | MS.gene91523:CDS | 30.0% |
| !! | CAATTTTAGTGAGGAATTGA+AGG | + | chr7.1:85270646-85270665 | MS.gene91523:CDS | 30.0% |
| !! | TGAAAAGGCTTTGAAGATAT+GGG | + | chr7.1:85273429-85273448 | MS.gene91523:CDS | 30.0% |
| !! | TTGGAATTGCAATTTTAGTG+AGG | + | chr7.1:85270637-85270656 | MS.gene91523:CDS | 30.0% |
| !!! | TCTTTACTTTTTCTCTCAAG+TGG | + | chr7.1:85275454-85275473 | MS.gene91523:CDS | 30.0% |
| AACTAAACCAAACATTGACC+AGG | - | chr7.1:85271976-85271995 | None:intergenic | 35.0% | |
| AAGAAACTATTAATGCCACG+TGG | - | chr7.1:85273286-85273305 | None:intergenic | 35.0% | |
| AATCGAACCATAGACAATGT+CGG | - | chr7.1:85271884-85271903 | None:intergenic | 35.0% | |
| AATCGAATAGACAGTTCAAC+CGG | + | chr7.1:85271846-85271865 | MS.gene91523:intron | 35.0% | |
| AATGCAAAGCTACCAAGTAA+TGG | - | chr7.1:85272401-85272420 | None:intergenic | 35.0% | |
| ACAATTTGGCGTTTCATAAG+AGG | + | chr7.1:85274592-85274611 | MS.gene91523:CDS | 35.0% | |
| ACTTTCTTTGAACTATGTGG+GGG | + | chr7.1:85274184-85274203 | MS.gene91523:intron | 35.0% | |
| ATGCAAAGCTACCAAGTAAT+GGG | - | chr7.1:85272400-85272419 | None:intergenic | 35.0% | |
| ATGGGAGCAATTCCAAAAAT+AGG | - | chr7.1:85275022-85275041 | None:intergenic | 35.0% | |
| ATTAGGATCTTTGACCTCTA+CGG | - | chr7.1:85275078-85275097 | None:intergenic | 35.0% | |
| CAAGGGTTGAAAATTATGCT+AGG | + | chr7.1:85273557-85273576 | MS.gene91523:CDS | 35.0% | |
| CACTTTCTTTGAACTATGTG+GGG | + | chr7.1:85274183-85274202 | MS.gene91523:intron | 35.0% | |
| CCACTTTCTTTGAACTATGT+GGG | + | chr7.1:85274182-85274201 | MS.gene91523:intron | 35.0% | |
| CTCAACTAACCAGATTTAGT+AGG | - | chr7.1:85272113-85272132 | None:intergenic | 35.0% | |
| CTTTCCAAGAGAAAGGAAAA+TGG | - | chr7.1:85273070-85273089 | None:intergenic | 35.0% | |
| GAAAATTCAGCACGACAAAT+CGG | - | chr7.1:85270401-85270420 | None:intergenic | 35.0% | |
| GAAACGCCAAATTGTTCTAA+TGG | - | chr7.1:85274587-85274606 | None:intergenic | 35.0% | |
| GAAAGAAAATTACGCGCATA+TGG | - | chr7.1:85271154-85271173 | None:intergenic | 35.0% | |
| GCTGTAAATATAGTTACAGC+AGG | + | chr7.1:85274225-85274244 | MS.gene91523:intron | 35.0% | |
| GCTGTAACTATATTTACAGC+AGG | - | chr7.1:85274225-85274244 | None:intergenic | 35.0% | |
| GTTATCTGAGAATAGTGAAG+AGG | + | chr7.1:85270874-85270893 | MS.gene91523:CDS | 35.0% | |
| TAACAAACCAGCTGAATCAT+CGG | - | chr7.1:85270858-85270877 | None:intergenic | 35.0% | |
| TACTACTACACTATGAAGCA+CGG | + | chr7.1:85272568-85272587 | MS.gene91523:intron | 35.0% | |
| TCAGAATCCTCAAAGATAGT+AGG | - | chr7.1:85271583-85271602 | None:intergenic | 35.0% | |
| TCCACTTTCTTTGAACTATG+TGG | + | chr7.1:85274181-85274200 | MS.gene91523:intron | 35.0% | |
| TCTATAAGTTCTTTGGACGA+TGG | + | chr7.1:85271211-85271230 | MS.gene91523:CDS | 35.0% | |
| TGATACTGTTTCACATGAAG+AGG | + | chr7.1:85270511-85270530 | MS.gene91523:CDS | 35.0% | |
| TGGTTTACCTACTATCTTTG+AGG | + | chr7.1:85271573-85271592 | MS.gene91523:CDS | 35.0% | |
| TTCGGATAAGCTCAAGAATT+CGG | + | chr7.1:85270952-85270971 | MS.gene91523:CDS | 35.0% | |
| TTCTGAATCACCAAGGATTA+TGG | + | chr7.1:85271597-85271616 | MS.gene91523:CDS | 35.0% | |
| TTGAAGAAGGTTAAAGCTAC+TGG | + | chr7.1:85271553-85271572 | MS.gene91523:CDS | 35.0% | |
| TTTGATAGAACAGCTGAAGA+TGG | + | chr7.1:85271528-85271547 | MS.gene91523:CDS | 35.0% | |
| ! | ACAGCAAAATTTGAAGCCTT+TGG | - | chr7.1:85270779-85270798 | None:intergenic | 35.0% |
| ! | AGAGATTGAGAGAGGTTTTA+AGG | + | chr7.1:85275372-85275391 | MS.gene91523:CDS | 35.0% |
| ! | AGATTTGGACTTTAAGGATG+AGG | + | chr7.1:85271309-85271328 | MS.gene91523:CDS | 35.0% |
| ! | ATGGTTCTACATGTATCCTA+CGG | - | chr7.1:85275577-85275596 | None:intergenic | 35.0% |
| ! | CGGAACAAGAGGTTTTTAAT+GGG | + | chr7.1:85270972-85270991 | MS.gene91523:CDS | 35.0% |
| ! | CTAGCATAATTTTCAACCCT+TGG | - | chr7.1:85273559-85273578 | None:intergenic | 35.0% |
| ! | CTGATCAATATGGATTGAGA+AGG | + | chr7.1:85273455-85273474 | MS.gene91523:CDS | 35.0% |
| ! | TCGGAACAAGAGGTTTTTAA+TGG | + | chr7.1:85270971-85270990 | MS.gene91523:CDS | 35.0% |
| ! | TGAGGAAAGCATAGAAAGTT+TGG | + | chr7.1:85271327-85271346 | MS.gene91523:CDS | 35.0% |
| ! | TGTGAATATGGTTAGTCCAT+TGG | + | chr7.1:85273645-85273664 | MS.gene91523:intron | 35.0% |
| ! | TTATGGAAGATTTGAAGCCA+TGG | + | chr7.1:85271614-85271633 | MS.gene91523:CDS | 35.0% |
| ! | TTTTTGTCGGACACAGATTT+TGG | + | chr7.1:85271235-85271254 | MS.gene91523:CDS | 35.0% |
| !! | AAAGCCATTTTCCTTTCTCT+TGG | + | chr7.1:85273063-85273082 | MS.gene91523:intron | 35.0% |
| !! | AAGGTAGGTTTTGATGATCA+AGG | - | chr7.1:85272057-85272076 | None:intergenic | 35.0% |
| !! | AGCATGCTTTATTTACAGCA+GGG | + | chr7.1:85274377-85274396 | MS.gene91523:intron | 35.0% |
| !! | AGTGATTTTGAAAAAAGGGG+TGG | + | chr7.1:85270686-85270705 | MS.gene91523:CDS | 35.0% |
| !! | ATATGCAACTTGCTGAAGAA+AGG | - | chr7.1:85271805-85271824 | None:intergenic | 35.0% |
| !! | GAGAAGTATCCATGTTTCAT+AGG | + | chr7.1:85272732-85272751 | MS.gene91523:intron | 35.0% |
| !! | GTAGAGTGTTGAATATGTCA+AGG | + | chr7.1:85275492-85275511 | MS.gene91523:CDS | 35.0% |
| !! | GTCACCTCTACACTTTTTAA+TGG | - | chr7.1:85272087-85272106 | None:intergenic | 35.0% |
| !!! | TTTGGACGATGGTTTTTTGT+CGG | + | chr7.1:85271222-85271241 | MS.gene91523:CDS | 35.0% |
| !!! | TTTGGATTTTGGTTATGAGC+CGG | + | chr7.1:85271345-85271364 | MS.gene91523:CDS | 35.0% |
| !!! | TTTTTGGAGTCGCCTATTTT+TGG | + | chr7.1:85275007-85275026 | MS.gene91523:intron | 35.0% |
| AATAGTGAAGAGGTTGTTGG+TGG | + | chr7.1:85270884-85270903 | MS.gene91523:CDS | 40.0% | |
| ACAAAAAGTGGTAGGAATGG+AGG | + | chr7.1:85272300-85272319 | MS.gene91523:intron | 40.0% | |
| ACTGTTTCACATGAAGAGGT+GGG | + | chr7.1:85270515-85270534 | MS.gene91523:CDS | 40.0% | |
| ACTTCTAGTGGAGCTTCTAA+CGG | + | chr7.1:85274693-85274712 | MS.gene91523:CDS | 40.0% | |
| AGAAAAATTGCGCATACAGG+AGG | + | chr7.1:85270928-85270947 | MS.gene91523:CDS | 40.0% | |
| AGAAAAGTTACACGAAGAGG+AGG | + | chr7.1:85271102-85271121 | MS.gene91523:CDS | 40.0% | |
| AGAAAAGTTACATGGAGTGG+AGG | + | chr7.1:85271015-85271034 | MS.gene91523:CDS | 40.0% | |
| AGAAGGTTCAATGAAGTAGC+TGG | + | chr7.1:85273472-85273491 | MS.gene91523:CDS | 40.0% | |
| ATCGTGTGGTTAAGATGATG+TGG | + | chr7.1:85274280-85274299 | MS.gene91523:intron | 40.0% | |
| CCCACATAGTTCAAAGAAAG+TGG | - | chr7.1:85274185-85274204 | None:intergenic | 40.0% | |
| CTAGGTGGTGAAATACCTTA+AGG | + | chr7.1:85275049-85275068 | MS.gene91523:intron | 40.0% | |
| CTCAGAAAAATTGCGCATAC+AGG | + | chr7.1:85270925-85270944 | MS.gene91523:CDS | 40.0% | |
| CTCAGAAAAGTTACACGAAG+AGG | + | chr7.1:85271099-85271118 | MS.gene91523:CDS | 40.0% | |
| CTCAGAAAAGTTACATGGAG+TGG | + | chr7.1:85271012-85271031 | MS.gene91523:CDS | 40.0% | |
| CTTTCCAAACTTGTCTTGCA+TGG | - | chr7.1:85273047-85273066 | None:intergenic | 40.0% | |
| GAAGGAAAAGAGATTGAGAG+AGG | + | chr7.1:85275364-85275383 | MS.gene91523:intron | 40.0% | |
| GACTTGGAAATGGTCTATGT+GGG | + | chr7.1:85273367-85273386 | MS.gene91523:CDS | 40.0% | |
| GAGAATAGTGAAGAGGTTGT+TGG | + | chr7.1:85270881-85270900 | MS.gene91523:CDS | 40.0% | |
| GCAACAAAAAGTGGTAGGAA+TGG | + | chr7.1:85272297-85272316 | MS.gene91523:intron | 40.0% | |
| GCCAACGGAACATTATCATT+CGG | - | chr7.1:85270821-85270840 | None:intergenic | 40.0% | |
| GCGACTCCAAAAATCAAACT+TGG | - | chr7.1:85275000-85275019 | None:intergenic | 40.0% | |
| GCTGAAGATGGAATTGAAGA+AGG | + | chr7.1:85271540-85271559 | MS.gene91523:CDS | 40.0% | |
| GGGTCATAGAAAAATTGTGG+TGG | - | chr7.1:85272994-85273013 | None:intergenic | 40.0% | |
| GTTTCATAGGACTACTGCAT+CGG | + | chr7.1:85272745-85272764 | MS.gene91523:intron | 40.0% | |
| TAACGACTGATCAACTAGCA+TGG | + | chr7.1:85275516-85275535 | MS.gene91523:CDS | 40.0% | |
| TAATGCCAATCCCCATTACT+TGG | + | chr7.1:85272386-85272405 | MS.gene91523:intron | 40.0% | |
| TACACTATGAAGCACGGATA+CGG | + | chr7.1:85272574-85272593 | MS.gene91523:intron | 40.0% | |
| TACATTGAACCATGACCTAG+AGG | + | chr7.1:85271945-85271964 | MS.gene91523:intron | 40.0% | |
| TACTGTTTCACATGAAGAGG+TGG | + | chr7.1:85270514-85270533 | MS.gene91523:CDS | 40.0% | |
| TATGAAGCACAGACACTCTT+CGG | + | chr7.1:85273732-85273751 | MS.gene91523:intron | 40.0% | |
| TATTGTGTTTGTGTCGTGTC+TGG | + | chr7.1:85273871-85273890 | MS.gene91523:intron | 40.0% | |
| TCATGAACCGACATTGTCTA+TGG | + | chr7.1:85271874-85271893 | MS.gene91523:intron | 40.0% | |
| TCGCAAATTATTAGCGGTGT+TGG | + | chr7.1:85273834-85273853 | MS.gene91523:intron | 40.0% | |
| TGAGTCAAAAATTGAGGCTG+AGG | + | chr7.1:85270454-85270473 | MS.gene91523:CDS | 40.0% | |
| TGCAAAGCTACCAAGTAATG+GGG | - | chr7.1:85272399-85272418 | None:intergenic | 40.0% | |
| TGCAGTAGTCCTATGAAACA+TGG | - | chr7.1:85272744-85272763 | None:intergenic | 40.0% | |
| TTAGGATCTTTGACCTCTAC+GGG | - | chr7.1:85275077-85275096 | None:intergenic | 40.0% | |
| TTGAGGATTCTGAATCACCA+AGG | + | chr7.1:85271590-85271609 | MS.gene91523:CDS | 40.0% | |
| ! | CTTAAGGTATTTCACCACCT+AGG | - | chr7.1:85275051-85275070 | None:intergenic | 40.0% |
| ! | GCTTCTAACGGATCTTCAAA+AGG | + | chr7.1:85274705-85274724 | MS.gene91523:CDS | 40.0% |
| ! | GTAACTATATGTGTCGGTGT+CGG | + | chr7.1:85272672-85272691 | MS.gene91523:intron | 40.0% |
| ! | TACTAGCATGTCACTTGTGA+TGG | - | chr7.1:85274548-85274567 | None:intergenic | 40.0% |
| ! | TCCGAATGATAATGTTCCGT+TGG | + | chr7.1:85270817-85270836 | MS.gene91523:CDS | 40.0% |
| ! | TGACTTGGAAATGGTCTATG+TGG | + | chr7.1:85273366-85273385 | MS.gene91523:CDS | 40.0% |
| ! | TTAGGGCGCCAAAATATTGT+TGG | + | chr7.1:85274937-85274956 | MS.gene91523:intron | 40.0% |
| !! | ATGAACCTTTTCAAGGTCCA+AGG | + | chr7.1:85273539-85273558 | MS.gene91523:CDS | 40.0% |
| !! | ATGTCGGTTCATGATTCAAC+CGG | - | chr7.1:85271868-85271887 | None:intergenic | 40.0% |
| !! | CAGCATGCTTTATTTACAGC+AGG | + | chr7.1:85274376-85274395 | MS.gene91523:intron | 40.0% |
| !! | TGAACCTTTTCAAGGTCCAA+GGG | + | chr7.1:85273540-85273559 | MS.gene91523:CDS | 40.0% |
| !!! | TTGAGAGAGGTTTTAAGGAG+TGG | + | chr7.1:85275377-85275396 | MS.gene91523:CDS | 40.0% |
| !!! | TTTTGGAATTGCTCCCATAG+CGG | + | chr7.1:85275024-85275043 | MS.gene91523:intron | 40.0% |
| AAAGTGGTAGGAATGGAGGT+TGG | + | chr7.1:85272304-85272323 | MS.gene91523:intron | 45.0% | |
| ATCACATGCATTCTTCCACG+TGG | + | chr7.1:85273268-85273287 | MS.gene91523:CDS | 45.0% | |
| ATTGCGCATACAGGAGGTTT+CGG | + | chr7.1:85270934-85270953 | MS.gene91523:CDS | 45.0% | |
| CAAACTTGTCTTGCATGGCA+AGG | - | chr7.1:85273042-85273061 | None:intergenic | 45.0% | |
| CGGAACAAGAGGTTGTTGAT+GGG | + | chr7.1:85271059-85271078 | MS.gene91523:CDS | 45.0% | |
| CTTGCCATGCAAGACAAGTT+TGG | + | chr7.1:85273040-85273059 | MS.gene91523:intron | 45.0% | |
| GCTCAAGAATTCGGAACAAG+AGG | + | chr7.1:85270961-85270980 | MS.gene91523:CDS | 45.0% | |
| GGAATGGAGGTTGGACATTA+AGG | + | chr7.1:85272313-85272332 | MS.gene91523:intron | 45.0% | |
| GGGACACTTGTGTCTTTCTT+GGG | + | chr7.1:85273387-85273406 | MS.gene91523:CDS | 45.0% | |
| TCAACCCTTGGACCTTGAAA+AGG | - | chr7.1:85273547-85273566 | None:intergenic | 45.0% | |
| TCCGTTGGCGAAAAATCATG+TGG | + | chr7.1:85270832-85270851 | MS.gene91523:CDS | 45.0% | |
| TCGGAACAAGAGGTTGTTGA+TGG | + | chr7.1:85271058-85271077 | MS.gene91523:CDS | 45.0% | |
| TCTTCTTCTCCGAAATCGTC+CGG | - | chr7.1:85271367-85271386 | None:intergenic | 45.0% | |
| TGGGACACTTGTGTCTTTCT+TGG | + | chr7.1:85273386-85273405 | MS.gene91523:CDS | 45.0% | |
| TGGTGACATGACTCTCTTTC+CGG | + | chr7.1:85274966-85274985 | MS.gene91523:intron | 45.0% | |
| TGTTGCAGAAGACAAAGGCA+AGG | + | chr7.1:85274483-85274502 | MS.gene91523:intron | 45.0% | |
| TTGATCTCGATGAGTCGAAC+CGG | + | chr7.1:85271479-85271498 | MS.gene91523:CDS | 45.0% | |
| ! | AGCTACCAAGTAATGGGGAT+TGG | - | chr7.1:85272394-85272413 | None:intergenic | 45.0% |
| ! | GCCACATGATTTTTCGCCAA+CGG | - | chr7.1:85270836-85270855 | None:intergenic | 45.0% |
| ! | TTTGGAATTGCTCCCATAGC+GGG | + | chr7.1:85275025-85275044 | MS.gene91523:intron | 45.0% |
| !! | TTCTCGGATTAGCTGTGTTC+CGG | - | chr7.1:85272717-85272736 | None:intergenic | 45.0% |
| AACTGTATATGGTCCCCCAC+GGG | - | chr7.1:85274411-85274430 | None:intergenic | 50.0% | |
| ACATGAGTCGTGTCCTACAC+CGG | + | chr7.1:85272695-85272714 | MS.gene91523:intron | 50.0% | |
| ACCACACGATTCAGATCCGA+CGG | - | chr7.1:85274270-85274289 | None:intergenic | 50.0% | |
| ACGGCTGAGATGCAAAACAG+CGG | + | chr7.1:85274349-85274368 | MS.gene91523:intron | 50.0% | |
| CTTTGAACTATGTGGGGGAC+CGG | + | chr7.1:85274189-85274208 | MS.gene91523:intron | 50.0% | |
| GAACTGTATATGGTCCCCCA+CGG | - | chr7.1:85274412-85274431 | None:intergenic | 50.0% | |
| GGTGACGACCCTACTAAATC+TGG | + | chr7.1:85272101-85272120 | MS.gene91523:intron | 50.0% | |
| GGTTATGAGCCGGACGATTT+CGG | + | chr7.1:85271355-85271374 | MS.gene91523:CDS | 50.0% | |
| TACAGCAGGGAATCCAATCC+CGG | - | chr7.1:85274409-85274390 | None:intergenic | 50.0% | |
| TTTGAACTATGTGGGGGACC+GGG | + | chr7.1:85274190-85274209 | MS.gene91523:intron | 50.0% | |
| ! | GATTAGCTGTGTTCCGGTGT+AGG | - | chr7.1:85272711-85272730 | None:intergenic | 50.0% |
| !! | CATGAAGAGGTGGGAGTGTT+TGG | + | chr7.1:85270524-85270543 | MS.gene91523:CDS | 50.0% |
| !! | GAACCGGTTCGACACACTTT+GGG | + | chr7.1:85271495-85271514 | MS.gene91523:CDS | 50.0% |
| ACGGATACGGACACAGACTC+TGG | + | chr7.1:85272587-85272606 | MS.gene91523:intron | 55.0% | |
| AGCAGGGAATCCAATCCCGT+GGG | + | chr7.1:85274393-85274412 | MS.gene91523:intron | 55.0% | |
| ATTGACCAGGCGAGACCTCT+AGG | - | chr7.1:85271963-85271982 | None:intergenic | 55.0% | |
| CATGTGGCCGATGATTCAGC+TGG | + | chr7.1:85270848-85270867 | MS.gene91523:CDS | 55.0% | |
| CTGTAACAGCACAGAGCCGT+CGG | + | chr7.1:85274251-85274270 | MS.gene91523:intron | 55.0% | |
| GCTCCCAAAGTGTGTCGAAC+CGG | - | chr7.1:85271501-85271520 | None:intergenic | 55.0% | |
| GGTCTCGCCTGGTCAATGTT+TGG | + | chr7.1:85271966-85271985 | MS.gene91523:intron | 55.0% | |
| TATATGGTCCCCCACGGGAT+TGG | - | chr7.1:85274406-85274425 | None:intergenic | 55.0% | |
| ! | ATACCTTAAGGCGCCCGTAG+AGG | + | chr7.1:85275061-85275080 | MS.gene91523:intron | 55.0% |
| ! | TATGCGTCGGTGTGTCGTGT+CGG | - | chr7.1:85273793-85273812 | None:intergenic | 55.0% |
| !! | CGAACCGGTTCGACACACTT+TGG | + | chr7.1:85271494-85271513 | MS.gene91523:CDS | 55.0% |
| !! | CGACACACTTTGGGAGCATC+AGG | + | chr7.1:85271504-85271523 | MS.gene91523:CDS | 55.0% |
| ACTATGTGGGGGACCGGGAT+TGG | + | chr7.1:85274195-85274214 | MS.gene91523:intron | 60.0% | |
| CAGCAGGGAATCCAATCCCG+TGG | + | chr7.1:85274392-85274411 | MS.gene91523:intron | 60.0% | |
| CAGGCGAGACCTCTAGGTCA+TGG | - | chr7.1:85271957-85271976 | None:intergenic | 60.0% | |
| CAGGGAATCCAATCCCGTGG+GGG | + | chr7.1:85274395-85274414 | MS.gene91523:intron | 60.0% | |
| CATGACCTAGAGGTCTCGCC+TGG | + | chr7.1:85271955-85271974 | MS.gene91523:intron | 60.0% | |
| GCAGGGAATCCAATCCCGTG+GGG | + | chr7.1:85274394-85274413 | MS.gene91523:intron | 60.0% | |
| GCCGTCGGATCTGAATCGTG+TGG | + | chr7.1:85274266-85274285 | MS.gene91523:intron | 60.0% | |
| TCACCACCTAGGCCCGCTAT+GGG | - | chr7.1:85275040-85275059 | None:intergenic | 60.0% | |
| TGACCTCTACGGGCGCCTTA+AGG | - | chr7.1:85275067-85275086 | None:intergenic | 60.0% | |
| TTCACCACCTAGGCCCGCTA+TGG | - | chr7.1:85275041-85275060 | None:intergenic | 60.0% | |
| !! | ATTGCTCCCATAGCGGGCCT+AGG | + | chr7.1:85275031-85275050 | MS.gene91523:intron | 60.0% |
| !! | GCTCCCATAGCGGGCCTAGG+TGG | + | chr7.1:85275034-85275053 | MS.gene91523:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 85270392 | 85275619 | 85270392 | ID=MS.gene91523 |
| chr7.1 | mRNA | 85270392 | 85275619 | 85270392 | ID=MS.gene91523.t1;Parent=MS.gene91523 |
| chr7.1 | exon | 85270392 | 85271760 | 85270392 | ID=MS.gene91523.t1.exon1;Parent=MS.gene91523.t1 |
| chr7.1 | CDS | 85270392 | 85271760 | 85270392 | ID=cds.MS.gene91523.t1;Parent=MS.gene91523.t1 |
| chr7.1 | exon | 85273206 | 85273625 | 85273206 | ID=MS.gene91523.t1.exon2;Parent=MS.gene91523.t1 |
| chr7.1 | CDS | 85273206 | 85273625 | 85273206 | ID=cds.MS.gene91523.t1;Parent=MS.gene91523.t1 |
| chr7.1 | exon | 85274491 | 85274726 | 85274491 | ID=MS.gene91523.t1.exon3;Parent=MS.gene91523.t1 |
| chr7.1 | CDS | 85274491 | 85274726 | 85274491 | ID=cds.MS.gene91523.t1;Parent=MS.gene91523.t1 |
| chr7.1 | exon | 85275365 | 85275619 | 85275365 | ID=MS.gene91523.t1.exon4;Parent=MS.gene91523.t1 |
| chr7.1 | CDS | 85275365 | 85275619 | 85275365 | ID=cds.MS.gene91523.t1;Parent=MS.gene91523.t1 |
| Gene Sequence |
| Protein sequence |
