AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92549

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92549.t1 MTR_4g019900 94.822 927 48 0 1 927 1 927 0.0 1715
MS.gene92549.t1 MTR_7g065880 45.714 875 376 25 74 927 42 838 0.0 578
MS.gene92549.t1 MTR_7g065880 44.700 783 348 22 74 835 42 760 9.53e-163 495
MS.gene92549.t1 MTR_4g064997 29.610 949 517 33 54 927 4 876 1.42e-73 260
MS.gene92549.t1 MTR_2g097850 35.308 422 225 10 537 927 511 915 6.29e-55 206
MS.gene92549.t1 MTR_1g073360 23.988 346 195 10 599 879 219 561 1.62e-19 94.0
MS.gene92549.t1 MTR_1g073360 23.988 346 195 10 599 879 254 596 1.62e-19 94.0
MS.gene92549.t1 MTR_5g010160 26.902 368 226 11 542 876 195 552 2.26e-14 77.8
MS.gene92549.t1 MTR_8g098260 24.756 513 241 21 542 927 807 1301 5.17e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92549.t1 AT5G01030 37.367 471 212 15 472 927 342 744 1.06e-70 249
MS.gene92549.t1 AT5G01030 37.367 471 212 15 472 927 342 744 1.06e-70 249
MS.gene92549.t1 AT5G01030 37.367 471 212 15 472 927 342 744 1.06e-70 249
MS.gene92549.t1 AT2G29510 34.316 475 263 10 473 927 394 839 7.10e-65 234
MS.gene92549.t1 AT5G59020 30.957 491 276 12 473 927 317 780 2.58e-54 203
MS.gene92549.t1 AT2G37930 33.987 459 216 14 472 927 169 543 1.05e-49 185
MS.gene92549.t1 AT2G37930 34.490 461 211 15 472 927 197 571 1.27e-49 185
MS.gene92549.t1 AT2G37930 34.490 461 211 15 472 927 197 571 1.27e-49 185
MS.gene92549.t1 AT2G37930 33.875 369 165 13 472 835 197 491 6.48e-36 143
MS.gene92549.t1 AT1G04490 37.607 117 59 4 765 880 289 392 6.49e-19 90.5
MS.gene92549.t1 AT1G04490 37.607 117 59 4 765 880 289 392 6.49e-19 90.5
MS.gene92549.t1 AT1G04490 37.607 117 59 4 765 880 289 392 6.49e-19 90.5
MS.gene92549.t1 AT1G04490 37.607 117 59 4 765 880 289 392 6.49e-19 90.5
MS.gene92549.t1 AT1G04490 37.607 117 59 4 765 880 289 392 6.49e-19 90.5
MS.gene92549.t1 AT1G04490 37.607 117 59 4 765 880 289 392 6.49e-19 90.5
MS.gene92549.t1 AT1G04490 37.607 117 59 4 765 880 289 392 6.49e-19 90.5
MS.gene92549.t1 AT1G04490 37.607 117 59 4 765 880 289 392 6.49e-19 90.5
MS.gene92549.t1 AT2G33360 40.517 116 62 4 768 881 325 435 1.18e-17 87.4
MS.gene92549.t1 AT2G33360 40.517 116 62 4 768 881 480 590 1.57e-17 87.8
MS.gene92549.t1 AT1G63520 34.899 149 73 4 730 876 351 477 1.64e-17 87.4
MS.gene92549.t1 AT1G04490 44.444 72 27 3 765 835 289 348 1.15e-11 68.2

Find 183 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTGCTATGGCTATGTTTA+TGG 0.115170 4.2:+82344085 None:intergenic
CCAAGGAACCTGGTTGTTTC+TGG 0.121277 4.2:+82342068 None:intergenic
ACCAGACATCTTGTTTATTT+TGG 0.128745 4.2:+82343762 None:intergenic
ATTCACTGATTCAGTGAATT+TGG 0.158512 4.2:+82342991 None:intergenic
CCTTCTGAGGATATGGTATT+TGG 0.163098 4.2:-82345026 MS.gene92549:CDS
AAGTCTTCTGCTGTTGTTAT+TGG 0.224622 4.2:+82342003 None:intergenic
GGTTAAAGAATATGTCTTAT+TGG 0.229796 4.2:-82342945 MS.gene92549:CDS
CACTTCTCTTCGCAGTTTCC+CGG 0.247251 4.2:+82344808 None:intergenic
CGACTTGAAAGTGCAATTTC+AGG 0.278575 4.2:+82343892 None:intergenic
TATGAAACCTTCTGAGGATA+TGG 0.280831 4.2:-82345033 MS.gene92549:CDS
TTCAACAATCAGTCATTTAC+AGG 0.283884 4.2:-82342122 MS.gene92549:CDS
ACTTTGTTGCCGTTGAATAA+TGG 0.284490 4.2:-82342166 MS.gene92549:CDS
AACGGATCAGACCGAATAAC+AGG 0.305934 4.2:-82344509 MS.gene92549:CDS
TATTGGAACTTGGTTCCTTA+AGG 0.308974 4.2:+82342020 None:intergenic
AGTTCTACTGTTATTCTTCC+AGG 0.317642 4.2:-82342773 MS.gene92549:CDS
GCACATGAGAAGAATGATTT+AGG 0.338212 4.2:-82343142 MS.gene92549:CDS
TAACAACAGCAGAAGACTTC+AGG 0.340482 4.2:-82341999 MS.gene92549:CDS
TGATGAAGCTAAGCAGAAAA+TGG 0.341705 4.2:-82344292 MS.gene92549:CDS
AGACTACTTCGGCTTGATTC+TGG 0.342643 4.2:+82343961 None:intergenic
ATTCTTCCAGGTGGTGTACA+TGG 0.343997 4.2:-82342761 MS.gene92549:CDS
AAAAGGATGTGTTAGACAAT+AGG 0.348011 4.2:-82343714 MS.gene92549:CDS
CTGCTGTTGTTATTGGAACT+TGG 0.350911 4.2:+82342010 None:intergenic
AAACGACTAGTTAGATCTTC+TGG 0.351862 4.2:+82344636 None:intergenic
AAGTCAGCTCAGCAGTTTCT+TGG 0.352085 4.2:+82343647 None:intergenic
CTCATTCAGTTCTAAGAAAA+CGG 0.353278 4.2:-82344172 MS.gene92549:CDS
GTTAAAGAATATGTCTTATT+GGG 0.356219 4.2:-82342944 MS.gene92549:CDS
TACGTTTAAACTCTGCCAAC+AGG 0.363429 4.2:+82341935 None:intergenic
ATGTGCTGCTAAACTATTCT+TGG 0.364355 4.2:+82343159 None:intergenic
CTTCTCACTTCCTATCCTCT+TGG 0.365421 4.2:+82344416 None:intergenic
TTACTTGGTTGTATATTGAT+TGG 0.367397 4.2:+82345062 None:intergenic
ATTGGAACTTGGTTCCTTAA+GGG 0.372550 4.2:+82342021 None:intergenic
CAGTGACTCCTGAATCTTCT+AGG 0.374114 4.2:-82343489 MS.gene92549:CDS
GCATCAGGCACGCACCATTC+AGG 0.384867 4.2:-82343370 MS.gene92549:CDS
GGAAGTGCATCCCTGTTATT+CGG 0.392157 4.2:+82344498 None:intergenic
TCCCAACGCCTAGAAGATTC+AGG 0.392268 4.2:+82343481 None:intergenic
CAACGGCAACAAAGTGAAAT+GGG 0.394423 4.2:+82342174 None:intergenic
GTGAATCAGTTGCCGGAGTC+AGG 0.398511 4.2:-82344120 MS.gene92549:CDS
GGTTTCATAAATTCATTACT+TGG 0.400918 4.2:+82345047 None:intergenic
CTCTTGGATCCACTTCTAGA+AGG 0.401913 4.2:+82344432 None:intergenic
GATTATGCGATTGTGGTGGT+TGG 0.405472 4.2:-82342685 MS.gene92549:CDS
TCAACGGCAACAAAGTGAAA+TGG 0.405989 4.2:+82342173 None:intergenic
CAGTTCTAAGAAAACGGGTT+CGG 0.406997 4.2:-82344166 MS.gene92549:CDS
AAGTTTGTCTCTTCAAAGTC+AGG 0.408081 4.2:-82343514 MS.gene92549:CDS
CAAGAGAAAGCTTTCAATGT+TGG 0.410712 4.2:-82344705 MS.gene92549:CDS
TGGTAAGGTTTATAACTTCT+CGG 0.411590 4.2:+82342608 None:intergenic
ATTGGTCTCGACTTGAGAAC+TGG 0.413293 4.2:-82344674 MS.gene92549:CDS
GGATCTAATAACCTCTTAAG+AGG 0.414021 4.2:+82343409 None:intergenic
GAGGGAAGTTTGCTACTTTG+TGG 0.414951 4.2:+82344477 None:intergenic
CAGAAGGAAATATTCGGAAC+CGG 0.417398 4.2:-82344827 MS.gene92549:CDS
TGTCTGTTCCATCTCAGATA+TGG 0.417769 4.2:+82344221 None:intergenic
AAATCATCCACCAGTGTTAG+TGG 0.419968 4.2:-82344564 MS.gene92549:CDS
CTTCATCGTTAATCCATAGA+TGG 0.423295 4.2:-82342718 MS.gene92549:CDS
TCCTGAATCTTCTAGGCGTT+GGG 0.424320 4.2:-82343482 MS.gene92549:CDS
CTCCTGAATCTTCTAGGCGT+TGG 0.428185 4.2:-82343483 MS.gene92549:CDS
TTCGACTTATCCGCACTCTT+CGG 0.428736 4.2:+82344909 None:intergenic
TTTAACCATATGCTGTCTCT+TGG 0.429134 4.2:+82342961 None:intergenic
ACAGGGGAAAGAGGTGGAAT+TGG 0.429908 4.2:+82341953 None:intergenic
CAAGATCAAGCCCTCTTAAG+AGG 0.431000 4.2:-82343420 MS.gene92549:CDS
TTGGCGGTCCTTGATCTGTC+TGG 0.431959 4.2:+82342909 None:intergenic
AGAAGCTGCTTGCTTTGAAA+AGG 0.434192 4.2:-82343731 MS.gene92549:CDS
TTATCCGCACTCTTCGGATT+CGG 0.440725 4.2:+82344915 None:intergenic
GCACAGATTCGTCCAGTTTG+AGG 0.440932 4.2:-82343321 MS.gene92549:CDS
CCAGAAACAACCAGGTTCCT+TGG 0.442985 4.2:-82342068 MS.gene92549:CDS
CACACCGATACTCCTCAAAC+TGG 0.446204 4.2:+82343309 None:intergenic
ATTATGCGATTGTGGTGGTT+GGG 0.446726 4.2:-82342684 MS.gene92549:CDS
TCCATGGTCGGGATGAACTT+TGG 0.446909 4.2:+82342890 None:intergenic
ATTAAAAGAACTTCAGATGT+TGG 0.447536 4.2:-82344378 MS.gene92549:CDS
CAATATTACTTGGCTTGCTA+TGG 0.449056 4.2:+82344073 None:intergenic
AGTTCTAAGAAAACGGGTTC+GGG 0.449744 4.2:-82344165 MS.gene92549:CDS
TTAATCCATAGATGGAGAAC+CGG 0.450697 4.2:-82342710 MS.gene92549:CDS
TCTGACTACTTTCACCTGAA+TGG 0.453420 4.2:+82343356 None:intergenic
TCAAAAGGTGAATCAGTTGC+CGG 0.455862 4.2:-82344127 MS.gene92549:CDS
TCCAAAATAAACAAGATGTC+TGG 0.456526 4.2:-82343763 MS.gene92549:CDS
TCATTCAGTTCTAAGAAAAC+GGG 0.456581 4.2:-82344171 MS.gene92549:CDS
ATTCCACCTCTTTCCCCTGT+TGG 0.458904 4.2:-82341950 MS.gene92549:CDS
GATGAAGGTTCACCTCTGTT+TGG 0.466821 4.2:+82342734 None:intergenic
TTGCCAACGTAAACCTCCTC+TGG 0.467221 4.2:+82343922 None:intergenic
AGATCCTATACTGAAGCATA+AGG 0.467514 4.2:-82343392 MS.gene92549:CDS
GAACTAAATTGTGAAGCTGC+AGG 0.481133 4.2:+82343538 None:intergenic
CAGCAGCAAGCTCCATGGTC+GGG 0.486385 4.2:+82342879 None:intergenic
CAAATCAACCAGACAGATCA+AGG 0.488665 4.2:-82342917 MS.gene92549:CDS
CATCCACCAGTGTTAGTGGC+AGG 0.491959 4.2:-82344560 MS.gene92549:CDS
AGCTTCAGCTTAAGTCGAAT+CGG 0.493820 4.2:-82343586 MS.gene92549:CDS
TTCCCTGCCACTAACACTGG+TGG 0.494216 4.2:+82344557 None:intergenic
TCATCTGAAGAACTTGAGTC+AGG 0.494466 4.2:+82344027 None:intergenic
ATACTGAAGCATAAGGCATC+AGG 0.494815 4.2:-82343385 MS.gene92549:CDS
TAAAGCAGCACAATATTACT+TGG 0.496475 4.2:+82344063 None:intergenic
GGATAATTCAAGCAAAGAAA+AGG 0.498701 4.2:-82343461 MS.gene92549:CDS
GGATAGGAAGTGAGAAGATG+AGG 0.500215 4.2:-82344410 MS.gene92549:CDS
GATGCCTTATGCTTCAGTAT+AGG 0.505162 4.2:+82343388 None:intergenic
CTACTCATTTCCAAGGAACC+TGG 0.506906 4.2:+82342058 None:intergenic
TTCTCGGAATGTTTGAACTC+AGG 0.509206 4.2:+82342624 None:intergenic
AAACACATGTCTAATTTGCC+AGG 0.511224 4.2:-82344762 MS.gene92549:CDS
AACAACAGCAGAAGACTTCA+GGG 0.512575 4.2:-82341998 MS.gene92549:CDS
GAAATTTAGCATCGAACTCA+AGG 0.514910 4.2:-82344356 MS.gene92549:CDS
AGTTGAAAACGATCCTGGTA+AGG 0.515550 4.2:+82342593 None:intergenic
TTCTTCCAGGTGGTGTACAT+GGG 0.515555 4.2:-82342760 MS.gene92549:CDS
TTGTGATCTGCAAGAGACCT+TGG 0.518732 4.2:+82343245 None:intergenic
AGAATGCAGAAGGAAATATT+CGG 0.521230 4.2:-82344833 MS.gene92549:CDS
GAACTCCAAGAGACAGCATA+TGG 0.521942 4.2:-82342966 MS.gene92549:CDS
TGCTGAGCTGACTTCGCAGA+AGG 0.523784 4.2:-82343638 MS.gene92549:CDS
GATAATGATATTATGAAGAA+AGG 0.524959 4.2:-82342806 MS.gene92549:CDS
GATTGTGGTGGTTGGGACAT+AGG 0.533688 4.2:-82342677 MS.gene92549:CDS
TCATAAGTCCATATCTGAGA+TGG 0.534433 4.2:-82344229 MS.gene92549:CDS
AGAATGCGAATCCAGTCAAA+AGG 0.534610 4.2:-82344142 MS.gene92549:CDS
CATCTATGGATTAACGATGA+AGG 0.534839 4.2:+82342719 None:intergenic
TGTTTGAGATCACTGCATTG+AGG 0.536120 4.2:+82344867 None:intergenic
CATGAGTGTAGAGACCCTTA+AGG 0.537517 4.2:-82342035 MS.gene92549:CDS
CGGTTTGAACCTTCTAGAAG+TGG 0.538283 4.2:-82344441 MS.gene92549:CDS
GCGAAGAGAAGTGGAAATGA+AGG 0.539648 4.2:-82344798 MS.gene92549:CDS
TGCTAAACTATTCTTGGTAG+CGG 0.539736 4.2:+82343165 None:intergenic
TCGTCCAGTTTGAGGAGTAT+CGG 0.539957 4.2:-82343313 MS.gene92549:CDS
TTCCCTCTGAGAATGTCAAA+CGG 0.546337 4.2:-82344461 MS.gene92549:CDS
CGGGAAACTGCGAAGAGAAG+TGG 0.549836 4.2:-82344807 MS.gene92549:CDS
TTCGGAATTCCAAACATCAT+CGG 0.550049 4.2:-82343995 MS.gene92549:CDS
AGAAGTGGATCCAAGAGGAT+AGG 0.552006 4.2:-82344426 MS.gene92549:CDS
ACTCTGCCAACAGGGGAAAG+AGG 0.552468 4.2:+82341944 None:intergenic
CACTGATTCAGTGAATTTGG+AGG 0.552575 4.2:+82342994 None:intergenic
CATCGAACTCAAGGCACCGC+AGG 0.553778 4.2:-82344347 MS.gene92549:CDS
AACTAAATTGTGAAGCTGCA+GGG 0.556606 4.2:+82343539 None:intergenic
TAATCCATAGATGGAGAACC+GGG 0.557653 4.2:-82342709 MS.gene92549:CDS
CTAAACCGACGGTTGTGAGA+TGG 0.558674 4.2:+82343607 None:intergenic
TCGAAGTCAAAGAGTGGTGT+TGG 0.559676 4.2:-82344891 MS.gene92549:CDS
ACGTTTAAACTCTGCCAACA+GGG 0.559891 4.2:+82341936 None:intergenic
ATGGTCGGGATGAACTTTGG+CGG 0.561832 4.2:+82342893 None:intergenic
GTCATATGTTTCTATTCCAG+AGG 0.564694 4.2:-82343938 MS.gene92549:CDS
TCTACTGTTATTCTTCCAGG+TGG 0.565467 4.2:-82342770 MS.gene92549:CDS
AAGGCAAAGCAGAATGCAGA+AGG 0.565696 4.2:-82344843 MS.gene92549:CDS
TCTCAGAAATTGAAGAAGAA+CGG 0.566407 4.2:+82343794 None:intergenic
TTGAGCACAAACTTAAACAA+AGG 0.567029 4.2:+82343208 None:intergenic
ATATGTTTCTATTCCAGAGG+AGG 0.571785 4.2:-82343935 MS.gene92549:CDS
TTCGGACTTTGATTTACTTG+CGG 0.574214 4.2:+82344933 None:intergenic
GATGATTCGCCTCTACTGAA+TGG 0.574870 4.2:+82344609 None:intergenic
GAGAAGTTATAAACCTTACC+AGG 0.578060 4.2:-82342606 MS.gene92549:CDS
CGGTGTGAATGAATCACTGC+AGG 0.580996 4.2:-82343293 MS.gene92549:CDS
TGAATTTATGAAACCTTCTG+AGG 0.581141 4.2:-82345039 MS.gene92549:CDS
TCATTATGCAGTAGATAACC+TGG 0.581839 4.2:+82344744 None:intergenic
CTAGAAGATTCAGGAGTCAC+TGG 0.582953 4.2:+82343490 None:intergenic
TTAAGCTGCCAGAAACAACC+AGG 0.587761 4.2:-82342076 MS.gene92549:CDS
CCAAATACCATATCCTCAGA+AGG 0.592197 4.2:+82345026 None:intergenic
ATGCAGTGATCTCAAACAGA+AGG 0.593803 4.2:-82344862 MS.gene92549:CDS
ACAGCAGCAAGCTCCATGGT+CGG 0.596519 4.2:+82342878 None:intergenic
AACCGTTTGACATTCTCAGA+GGG 0.598569 4.2:+82344459 None:intergenic
ATCCACCAGTGTTAGTGGCA+GGG 0.601571 4.2:-82344559 MS.gene92549:CDS
GCTGAGCTGACTTCGCAGAA+GGG 0.602620 4.2:-82343637 MS.gene92549:CDS
AGAAGGAAATATTCGGAACC+GGG 0.604142 4.2:-82344826 MS.gene92549:CDS
CGTTTCACACCATTCAGTAG+AGG 0.604174 4.2:-82344618 MS.gene92549:CDS
GCCAAAGTTCATCCCGACCA+TGG 0.607703 4.2:-82342891 MS.gene92549:CDS
CTATCATCAAAACCTGACTC+CGG 0.610690 4.2:+82344108 None:intergenic
GATCTAATAACCTCTTAAGA+GGG 0.611308 4.2:+82343410 None:intergenic
ACTCATGCTACTCATTTCCA+AGG 0.617071 4.2:+82342051 None:intergenic
TCTACTGCATAATGATAGAG+TGG 0.617688 4.2:-82344736 MS.gene92549:CDS
ATTCCAGAGGAGGTTTACGT+TGG 0.618088 4.2:-82343925 MS.gene92549:CDS
ACCACAATCGCATAATCCCC+CGG 0.618179 4.2:+82342691 None:intergenic
AGCAAGGTATCATCAATCCA+AGG 0.618319 4.2:-82343262 MS.gene92549:CDS
AACAACAGCAGCAAGCTCCA+TGG 0.623805 4.2:+82342874 None:intergenic
CTGCCAACAGGGGAAAGAGG+TGG 0.625772 4.2:+82341947 None:intergenic
AAACATATGACAGACTACTT+CGG 0.625938 4.2:+82343950 None:intergenic
CAAATCCATCTCACAACCGT+CGG 0.629325 4.2:-82343612 MS.gene92549:CDS
ATGATTGGAAAGGTTCGCAA+CGG 0.629860 4.2:-82344527 MS.gene92549:CDS
GAAGCTAAGCAGAAAATGGA+GGG 0.635705 4.2:-82344288 MS.gene92549:CDS
AGTGGTGGATGGATGAGTCA+CGG 0.636917 4.2:-82343076 MS.gene92549:CDS
GAGTAGAATCCATTATTCAA+CGG 0.638175 4.2:+82342157 None:intergenic
CTTGAGTCAGGAATATCATG+TGG 0.638842 4.2:+82344039 None:intergenic
TGAAGCTAAGCAGAAAATGG+AGG 0.642246 4.2:-82344289 MS.gene92549:CDS
AAGTATGCTCAATCGCAGAA+CGG 0.651591 4.2:+82343866 None:intergenic
ATCCATAGATGGAGAACCGG+GGG 0.654635 4.2:-82342707 MS.gene92549:CDS
GGTGACCCATGTACACCACC+TGG 0.655426 4.2:+82342755 None:intergenic
GTTGCTTGAGTTTCCACACG+AGG 0.656183 4.2:+82342844 None:intergenic
AAACCGTTTGACATTCTCAG+AGG 0.658195 4.2:+82344458 None:intergenic
TCAAGCAACGAACAATTGCA+TGG 0.659675 4.2:-82342830 MS.gene92549:CDS
CGTTTAAACTCTGCCAACAG+GGG 0.660756 4.2:+82341937 None:intergenic
ACTGCAGGATGAAAAGAGCA+AGG 0.666537 4.2:-82343278 MS.gene92549:CDS
GAACAGAAGACGAGATCCTG+CGG 0.678552 4.2:+82344331 None:intergenic
AACGGCAACAAAGTGAAATG+GGG 0.680624 4.2:+82342175 None:intergenic
GATAAGTCGAAGTCAAAGAG+TGG 0.681954 4.2:-82344897 MS.gene92549:CDS
TTAAGCTGAAGCTAAACCGA+CGG 0.682871 4.2:+82343596 None:intergenic
ACGGATCAGACCGAATAACA+GGG 0.686080 4.2:-82344508 MS.gene92549:CDS
CTTCTAGAAGTGGATCCAAG+AGG 0.703082 4.2:-82344431 MS.gene92549:CDS
ACAACAGCAGAAGACTTCAG+GGG 0.720766 4.2:-82341997 MS.gene92549:CDS
AAGTCCGAATCCGAAGAGTG+CGG 0.720839 4.2:-82344919 MS.gene92549:CDS
GTACATGGGTCACCAAACAG+AGG 0.726146 4.2:-82342746 MS.gene92549:CDS
AATCCATAGATGGAGAACCG+GGG 0.736635 4.2:-82342708 MS.gene92549:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGAAATTAAGAAAAAGAG+TGG - chr4.2:82343911-82343930 MS.gene92549:CDS 20.0%
!! GATAATGATATTATGAAGAA+AGG - chr4.2:82344199-82344218 MS.gene92549:CDS 20.0%
!! TAATCATAACCATATGTAAA+TGG + chr4.2:82344782-82344801 None:intergenic 20.0%
!! TTATAAAAATAGCTATGCAT+AGG - chr4.2:82344648-82344667 MS.gene92549:CDS 20.0%
!!! GTTAAAGAATATGTCTTATT+GGG - chr4.2:82344061-82344080 MS.gene92549:CDS 20.0%
!!! TCATCATCTTTATTTTCATT+AGG + chr4.2:82342699-82342718 None:intergenic 20.0%
! AACAAGTCAAAAACAACTTA+TGG + chr4.2:82344554-82344573 None:intergenic 25.0%
! ACAGTAAAATCAAAAAGCAA+AGG - chr4.2:82342807-82342826 MS.gene92549:CDS 25.0%
! AGTAAAATCAAAAAGCAAAG+GGG - chr4.2:82342809-82342828 MS.gene92549:CDS 25.0%
! ATATGGTTATGATTACTTTC+AGG - chr4.2:82344787-82344806 MS.gene92549:CDS 25.0%
! ATTAAAAGAACTTCAGATGT+TGG - chr4.2:82342627-82342646 MS.gene92549:CDS 25.0%
! CAGTAAAATCAAAAAGCAAA+GGG - chr4.2:82342808-82342827 MS.gene92549:CDS 25.0%
! GGAAATAAAGAAAAAAGTTG+TGG - chr4.2:82343950-82343969 MS.gene92549:CDS 25.0%
! GGTTAAAGAATATGTCTTAT+TGG - chr4.2:82344060-82344079 MS.gene92549:CDS 25.0%
! GGTTTCATAAATTCATTACT+TGG + chr4.2:82341961-82341980 None:intergenic 25.0%
! TATAATTGTAGACTGTATTG+TGG - chr4.2:82344751-82344770 MS.gene92549:CDS 25.0%
! TTACTTGGTTGTATATTGAT+TGG + chr4.2:82341946-82341965 None:intergenic 25.0%
! TTGCAGATCACAATTAAAAA+TGG - chr4.2:82343770-82343789 MS.gene92549:CDS 25.0%
!!! AGAAGTTTCAGTTTTAAAGA+AGG - chr4.2:82343443-82343462 MS.gene92549:CDS 25.0%
!!! TGCATAGCTATTTTTATAAC+AGG + chr4.2:82344647-82344666 None:intergenic 25.0%
AAAAGGATGTGTTAGACAAT+AGG - chr4.2:82343291-82343310 MS.gene92549:CDS 30.0%
AAACATATGACAGACTACTT+CGG + chr4.2:82343058-82343077 None:intergenic 30.0%
AAACCTTCTACATTCTACTT+GGG - chr4.2:82344449-82344468 MS.gene92549:CDS 30.0%
AGAATGCAGAAGGAAATATT+CGG - chr4.2:82342172-82342191 MS.gene92549:CDS 30.0%
GAAATTAAGAAAAAGAGTGG+TGG - chr4.2:82343914-82343933 MS.gene92549:CDS 30.0%
GAGTAGAATCCATTATTCAA+CGG + chr4.2:82344851-82344870 None:intergenic 30.0%
GATCTAATAACCTCTTAAGA+GGG + chr4.2:82343598-82343617 None:intergenic 30.0%
GGATAATTCAAGCAAAGAAA+AGG - chr4.2:82343544-82343563 MS.gene92549:CDS 30.0%
TAAACCTTCTACATTCTACT+TGG - chr4.2:82344448-82344467 MS.gene92549:CDS 30.0%
TAAAGCAGCACAATATTACT+TGG + chr4.2:82342945-82342964 None:intergenic 30.0%
TCCAAAATAAACAAGATGTC+TGG - chr4.2:82343242-82343261 MS.gene92549:CDS 30.0%
TCTCAGAAATTGAAGAAGAA+CGG + chr4.2:82343214-82343233 None:intergenic 30.0%
TGAATTTATGAAACCTTCTG+AGG - chr4.2:82341966-82341985 MS.gene92549:CDS 30.0%
TGGTAAGGTTTATAACTTCT+CGG + chr4.2:82344400-82344419 None:intergenic 30.0%
TTCAACAATCAGTCATTTAC+AGG - chr4.2:82344883-82344902 MS.gene92549:CDS 30.0%
TTGAGCACAAACTTAAACAA+AGG + chr4.2:82343800-82343819 None:intergenic 30.0%
! ATTGAGCATACTTCTTTTTC+TGG - chr4.2:82343149-82343168 MS.gene92549:CDS 30.0%
! CAAGTTCTTCAGATGATTTT+CGG - chr4.2:82342985-82343004 MS.gene92549:CDS 30.0%
! GAAAAACTTGATGATTGGAA+AGG - chr4.2:82342468-82342487 MS.gene92549:intron 30.0%
! GATTTCTCTCTATTTTCTTG+TGG + chr4.2:82342758-82342777 None:intergenic 30.0%
! GGAATTGGTGCATATTTTAT+AGG + chr4.2:82345040-82345059 None:intergenic 30.0%
! GGTTTAGAATTCAAAAAGCT+CGG - chr4.2:82342000-82342019 MS.gene92549:CDS 30.0%
! TCGTTTTCAACTTTTTGTTC+AGG - chr4.2:82344423-82344442 MS.gene92549:CDS 30.0%
!! ACCAGACATCTTGTTTATTT+TGG + chr4.2:82343246-82343265 None:intergenic 30.0%
!! ATTCACTGATTCAGTGAATT+TGG + chr4.2:82344017-82344036 None:intergenic 30.0%
!! CTCATTCAGTTCTAAGAAAA+CGG - chr4.2:82342833-82342852 MS.gene92549:CDS 30.0%
!! TCAATGTTGGTGTTTTAGAT+TGG - chr4.2:82342313-82342332 MS.gene92549:intron 30.0%
!! TCATTCAGTTCTAAGAAAAC+GGG - chr4.2:82342834-82342853 MS.gene92549:CDS 30.0%
!!! GCTTTTTTGAGTTTATCTAC+TGG - chr4.2:82344486-82344505 MS.gene92549:CDS 30.0%
AACCTTCTACATTCTACTTG+GGG - chr4.2:82344450-82344469 MS.gene92549:CDS 35.0%
AACTAAATTGTGAAGCTGCA+GGG + chr4.2:82343469-82343488 None:intergenic 35.0%
AAGCACTTGTGAAACTAACT+GGG - chr4.2:82344512-82344531 MS.gene92549:CDS 35.0%
AAGTCTTCTGCTGTTGTTAT+TGG + chr4.2:82345005-82345024 None:intergenic 35.0%
AAGTTTGTCTCTTCAAAGTC+AGG - chr4.2:82343491-82343510 MS.gene92549:CDS 35.0%
ACTTTGTTGCCGTTGAATAA+TGG - chr4.2:82344839-82344858 MS.gene92549:CDS 35.0%
AGATCCTATACTGAAGCATA+AGG - chr4.2:82343613-82343632 MS.gene92549:CDS 35.0%
AGTTCTACTGTTATTCTTCC+AGG - chr4.2:82344232-82344251 MS.gene92549:CDS 35.0%
ATGTCATCATGCACTTTGTT+TGG + chr4.2:82344724-82344743 None:intergenic 35.0%
ATTGGAACTTGGTTCCTTAA+GGG + chr4.2:82344987-82345006 None:intergenic 35.0%
CAAAAAGTTGAAAACGATCC+TGG + chr4.2:82344420-82344439 None:intergenic 35.0%
CAAGAGAAAGCTTTCAATGT+TGG - chr4.2:82342300-82342319 MS.gene92549:intron 35.0%
CTTCATCGTTAATCCATAGA+TGG - chr4.2:82344287-82344306 MS.gene92549:CDS 35.0%
GAGAAGTTATAAACCTTACC+AGG - chr4.2:82344399-82344418 MS.gene92549:CDS 35.0%
GCACATGAGAAGAATGATTT+AGG - chr4.2:82343863-82343882 MS.gene92549:CDS 35.0%
GGATCTAATAACCTCTTAAG+AGG + chr4.2:82343599-82343618 None:intergenic 35.0%
GGTTATGATTACTTTCAGGA+AGG - chr4.2:82344791-82344810 MS.gene92549:CDS 35.0%
GTGGATACTCCATTTACATA+TGG - chr4.2:82344770-82344789 MS.gene92549:CDS 35.0%
TAAGCACTTGTGAAACTAAC+TGG - chr4.2:82344511-82344530 MS.gene92549:CDS 35.0%
TATTGGAACTTGGTTCCTTA+AGG + chr4.2:82344988-82345007 None:intergenic 35.0%
TCATAAGTCCATATCTGAGA+TGG - chr4.2:82342776-82342795 MS.gene92549:CDS 35.0%
TCATTATGCAGTAGATAACC+TGG + chr4.2:82342264-82342283 None:intergenic 35.0%
TCTACTGCATAATGATAGAG+TGG - chr4.2:82342269-82342288 MS.gene92549:intron 35.0%
TGATGAAGCTAAGCAGAAAA+TGG - chr4.2:82342713-82342732 MS.gene92549:CDS 35.0%
TGCTAAACTATTCTTGGTAG+CGG + chr4.2:82343843-82343862 None:intergenic 35.0%
TTAATCCATAGATGGAGAAC+CGG - chr4.2:82344295-82344314 MS.gene92549:CDS 35.0%
TTCGGAATTCCAAACATCAT+CGG - chr4.2:82343010-82343029 MS.gene92549:CDS 35.0%
TTTAACCATATGCTGTCTCT+TGG + chr4.2:82344047-82344066 None:intergenic 35.0%
! AAACACATGTCTAATTTGCC+AGG - chr4.2:82342243-82342262 MS.gene92549:intron 35.0%
! AAACGACTAGTTAGATCTTC+TGG + chr4.2:82342372-82342391 None:intergenic 35.0%
! ATATGTTTCTATTCCAGAGG+AGG - chr4.2:82343070-82343089 MS.gene92549:CDS 35.0%
! ATGTGCTGCTAAACTATTCT+TGG + chr4.2:82343849-82343868 None:intergenic 35.0%
! CATCTATGGATTAACGATGA+AGG + chr4.2:82344289-82344308 None:intergenic 35.0%
! GAAATTTAGCATCGAACTCA+AGG - chr4.2:82342649-82342668 MS.gene92549:CDS 35.0%
! GATTTTCATCCGATGATGTT+TGG + chr4.2:82343022-82343041 None:intergenic 35.0%
! GTCATATGTTTCTATTCCAG+AGG - chr4.2:82343067-82343086 MS.gene92549:CDS 35.0%
! TATGAAACCTTCTGAGGATA+TGG - chr4.2:82341972-82341991 MS.gene92549:CDS 35.0%
! TTAAGAAAAAGAGTGGTGGA+TGG - chr4.2:82343918-82343937 MS.gene92549:CDS 35.0%
! TTCAGATGATTTTCGGCTTT+CGG - chr4.2:82342992-82343011 MS.gene92549:CDS 35.0%
! TTCGGACTTTGATTTACTTG+CGG + chr4.2:82342075-82342094 None:intergenic 35.0%
!! CAATATTACTTGGCTTGCTA+TGG + chr4.2:82342935-82342954 None:intergenic 35.0%
!!! ACTGGTGGATGATTTTGATT+TGG + chr4.2:82342436-82342455 None:intergenic 35.0%
AAACCGTTTGACATTCTCAG+AGG + chr4.2:82342550-82342569 None:intergenic 40.0%
AAATCATCCACCAGTGTTAG+TGG - chr4.2:82342441-82342460 MS.gene92549:intron 40.0%
AACAACAGCAGAAGACTTCA+GGG - chr4.2:82345007-82345026 MS.gene92549:CDS 40.0%
AACCGTTTGACATTCTCAGA+GGG + chr4.2:82342549-82342568 None:intergenic 40.0%
AACGGCAACAAAGTGAAATG+GGG + chr4.2:82344833-82344852 None:intergenic 40.0%
AAGTATGCTCAATCGCAGAA+CGG + chr4.2:82343142-82343161 None:intergenic 40.0%
ACTCATGCTACTCATTTCCA+AGG + chr4.2:82344957-82344976 None:intergenic 40.0%
AGAAGGAAATATTCGGAACC+GGG - chr4.2:82342179-82342198 MS.gene92549:CDS 40.0%
AGAATGCGAATCCAGTCAAA+AGG - chr4.2:82342863-82342882 MS.gene92549:CDS 40.0%
AGCTTCAGCTTAAGTCGAAT+CGG - chr4.2:82343419-82343438 MS.gene92549:CDS 40.0%
AGTTGAAAACGATCCTGGTA+AGG + chr4.2:82344415-82344434 None:intergenic 40.0%
ATGATTGGAAAGGTTCGCAA+CGG - chr4.2:82342478-82342497 MS.gene92549:intron 40.0%
ATGCAGTGATCTCAAACAGA+AGG - chr4.2:82342143-82342162 MS.gene92549:CDS 40.0%
ATTATGCGATTGTGGTGGTT+GGG - chr4.2:82344321-82344340 MS.gene92549:CDS 40.0%
CAAAGTGCATGATGACATTG+TGG - chr4.2:82344726-82344745 MS.gene92549:CDS 40.0%
CAAATCAACCAGACAGATCA+AGG - chr4.2:82344088-82344107 MS.gene92549:CDS 40.0%
CAACGGCAACAAAGTGAAAT+GGG + chr4.2:82344834-82344853 None:intergenic 40.0%
CAGAAGGAAATATTCGGAAC+CGG - chr4.2:82342178-82342197 MS.gene92549:CDS 40.0%
CCAAATACCATATCCTCAGA+AGG + chr4.2:82341982-82342001 None:intergenic 40.0%
CTATCATCAAAACCTGACTC+CGG + chr4.2:82342900-82342919 None:intergenic 40.0%
CTTGAGTCAGGAATATCATG+TGG + chr4.2:82342969-82342988 None:intergenic 40.0%
GAACTAAATTGTGAAGCTGC+AGG + chr4.2:82343470-82343489 None:intergenic 40.0%
GAAGCTAAGCAGAAAATGGA+GGG - chr4.2:82342717-82342736 MS.gene92549:CDS 40.0%
GATAAGTCGAAGTCAAAGAG+TGG - chr4.2:82342108-82342127 MS.gene92549:CDS 40.0%
GATGCCTTATGCTTCAGTAT+AGG + chr4.2:82343620-82343639 None:intergenic 40.0%
TAACAACAGCAGAAGACTTC+AGG - chr4.2:82345006-82345025 MS.gene92549:CDS 40.0%
TAATCCATAGATGGAGAACC+GGG - chr4.2:82344296-82344315 MS.gene92549:CDS 40.0%
TCAAAAAGCTCGGCTCAAAA+CGG - chr4.2:82342010-82342029 MS.gene92549:CDS 40.0%
TCAAAAGGTGAATCAGTTGC+CGG - chr4.2:82342878-82342897 MS.gene92549:CDS 40.0%
TCAACGGCAACAAAGTGAAA+TGG + chr4.2:82344835-82344854 None:intergenic 40.0%
TCAAGCAACGAACAATTGCA+TGG - chr4.2:82344175-82344194 MS.gene92549:CDS 40.0%
TCATCTGAAGAACTTGAGTC+AGG + chr4.2:82342981-82343000 None:intergenic 40.0%
TCTACTGTTATTCTTCCAGG+TGG - chr4.2:82344235-82344254 MS.gene92549:CDS 40.0%
TCTGACTACTTTCACCTGAA+TGG + chr4.2:82343652-82343671 None:intergenic 40.0%
TGAAGCTAAGCAGAAAATGG+AGG - chr4.2:82342716-82342735 MS.gene92549:CDS 40.0%
TGTCTGTTCCATCTCAGATA+TGG + chr4.2:82342787-82342806 None:intergenic 40.0%
TTAAGCTGAAGCTAAACCGA+CGG + chr4.2:82343412-82343431 None:intergenic 40.0%
TTCTCGGAATGTTTGAACTC+AGG + chr4.2:82344384-82344403 None:intergenic 40.0%
! AGCAAGGTATCATCAATCCA+AGG - chr4.2:82343743-82343762 MS.gene92549:CDS 40.0%
! ATACTGAAGCATAAGGCATC+AGG - chr4.2:82343620-82343639 MS.gene92549:CDS 40.0%
! CCTTCTGAGGATATGGTATT+TGG - chr4.2:82341979-82341998 MS.gene92549:CDS 40.0%
! CGACTTGAAAGTGCAATTTC+AGG + chr4.2:82343116-82343135 None:intergenic 40.0%
! CTGCTGTTGTTATTGGAACT+TGG + chr4.2:82344998-82345017 None:intergenic 40.0%
! GCAGGGAAAAACTTGATGAT+TGG - chr4.2:82342463-82342482 MS.gene92549:intron 40.0%
! TGTTTGAGATCACTGCATTG+AGG + chr4.2:82342141-82342160 None:intergenic 40.0%
! TTCCCTCTGAGAATGTCAAA+CGG - chr4.2:82342544-82342563 MS.gene92549:intron 40.0%
!! AGAAGCTGCTTGCTTTGAAA+AGG - chr4.2:82343274-82343293 MS.gene92549:CDS 40.0%
!! AGTTCTAAGAAAACGGGTTC+GGG - chr4.2:82342840-82342859 MS.gene92549:CDS 40.0%
!! CAACTGATTCACCTTTTGAC+TGG + chr4.2:82342877-82342896 None:intergenic 40.0%
!! CACTGATTCAGTGAATTTGG+AGG + chr4.2:82344014-82344033 None:intergenic 40.0%
!! CAGTTCTAAGAAAACGGGTT+CGG - chr4.2:82342839-82342858 MS.gene92549:CDS 40.0%
!! GCTTGCTATGGCTATGTTTA+TGG + chr4.2:82342923-82342942 None:intergenic 40.0%
!!! GGTGGATGATTTTGATTTGG+TGG + chr4.2:82342433-82342452 None:intergenic 40.0%
AACGGATCAGACCGAATAAC+AGG - chr4.2:82342496-82342515 MS.gene92549:intron 45.0%
AAGGCAAAGCAGAATGCAGA+AGG - chr4.2:82342162-82342181 MS.gene92549:CDS 45.0%
AAGTCAGCTCAGCAGTTTCT+TGG + chr4.2:82343361-82343380 None:intergenic 45.0%
AATCCATAGATGGAGAACCG+GGG - chr4.2:82344297-82344316 MS.gene92549:CDS 45.0%
ACAACAGCAGAAGACTTCAG+GGG - chr4.2:82345008-82345027 MS.gene92549:CDS 45.0%
ACGGATCAGACCGAATAACA+GGG - chr4.2:82342497-82342516 MS.gene92549:intron 45.0%
ACTGCAGGATGAAAAGAGCA+AGG - chr4.2:82343727-82343746 MS.gene92549:CDS 45.0%
AGAAGTGGATCCAAGAGGAT+AGG - chr4.2:82342579-82342598 MS.gene92549:intron 45.0%
AGCCCCAAGTAGAATGTAGA+AGG + chr4.2:82344455-82344474 None:intergenic 45.0%
ATTCCAGAGGAGGTTTACGT+TGG - chr4.2:82343080-82343099 MS.gene92549:CDS 45.0%
ATTCTTCCAGGTGGTGTACA+TGG - chr4.2:82344244-82344263 MS.gene92549:CDS 45.0%
CAAATCCATCTCACAACCGT+CGG - chr4.2:82343393-82343412 MS.gene92549:CDS 45.0%
CAAGATCAAGCCCTCTTAAG+AGG - chr4.2:82343585-82343604 MS.gene92549:CDS 45.0%
CAGTGACTCCTGAATCTTCT+AGG - chr4.2:82343516-82343535 MS.gene92549:CDS 45.0%
CATGAGTGTAGAGACCCTTA+AGG - chr4.2:82344970-82344989 MS.gene92549:CDS 45.0%
CGTTTCACACCATTCAGTAG+AGG - chr4.2:82342387-82342406 MS.gene92549:intron 45.0%
CTACTCATTTCCAAGGAACC+TGG + chr4.2:82344950-82344969 None:intergenic 45.0%
CTAGAAGATTCAGGAGTCAC+TGG + chr4.2:82343518-82343537 None:intergenic 45.0%
CTCTTGGATCCACTTCTAGA+AGG + chr4.2:82342576-82342595 None:intergenic 45.0%
CTTCTCACTTCCTATCCTCT+TGG + chr4.2:82342592-82342611 None:intergenic 45.0%
GAACTCCAAGAGACAGCATA+TGG - chr4.2:82344039-82344058 MS.gene92549:CDS 45.0%
GATGAAGGTTCACCTCTGTT+TGG + chr4.2:82344274-82344293 None:intergenic 45.0%
GATGATTCGCCTCTACTGAA+TGG + chr4.2:82342399-82342418 None:intergenic 45.0%
GATTATGCGATTGTGGTGGT+TGG - chr4.2:82344320-82344339 MS.gene92549:CDS 45.0%
GCGAAGAGAAGTGGAAATGA+AGG - chr4.2:82342207-82342226 MS.gene92549:intron 45.0%
GGATAGGAAGTGAGAAGATG+AGG - chr4.2:82342595-82342614 MS.gene92549:CDS 45.0%
TCCTGAATCTTCTAGGCGTT+GGG - chr4.2:82343523-82343542 MS.gene92549:CDS 45.0%
TCGAAGTCAAAGAGTGGTGT+TGG - chr4.2:82342114-82342133 MS.gene92549:CDS 45.0%
TTAAGCTGCCAGAAACAACC+AGG - chr4.2:82344929-82344948 MS.gene92549:CDS 45.0%
TTATCCGCACTCTTCGGATT+CGG + chr4.2:82342093-82342112 None:intergenic 45.0%
TTCGACTTATCCGCACTCTT+CGG + chr4.2:82342099-82342118 None:intergenic 45.0%
TTCTTCCAGGTGGTGTACAT+GGG - chr4.2:82344245-82344264 MS.gene92549:CDS 45.0%
TTGTGATCTGCAAGAGACCT+TGG + chr4.2:82343763-82343782 None:intergenic 45.0%
! AGACTACTTCGGCTTGATTC+TGG + chr4.2:82343047-82343066 None:intergenic 45.0%
! ATTGGTCTCGACTTGAGAAC+TGG - chr4.2:82342331-82342350 MS.gene92549:intron 45.0%
! CGGTTTGAACCTTCTAGAAG+TGG - chr4.2:82342564-82342583 MS.gene92549:intron 45.0%
! CTTCTAGAAGTGGATCCAAG+AGG - chr4.2:82342574-82342593 MS.gene92549:intron 45.0%
! GGAAGTGCATCCCTGTTATT+CGG + chr4.2:82342510-82342529 None:intergenic 45.0%
! TACTTGGGGCTTGTTTCGAT+TGG - chr4.2:82344464-82344483 MS.gene92549:CDS 45.0%
! TCGTCCAGTTTGAGGAGTAT+CGG - chr4.2:82343692-82343711 MS.gene92549:CDS 45.0%
! TTTTTCCCTGCCACTAACAC+TGG + chr4.2:82342454-82342473 None:intergenic 45.0%
!! GAGGGAAGTTTGCTACTTTG+TGG + chr4.2:82342531-82342550 None:intergenic 45.0%
!!! GTTGTTTTTGAGACCTCGTG+TGG - chr4.2:82344148-82344167 MS.gene92549:CDS 45.0%
AACAACAGCAGCAAGCTCCA+TGG + chr4.2:82344134-82344153 None:intergenic 50.0%
AAGTCCGAATCCGAAGAGTG+CGG - chr4.2:82342086-82342105 MS.gene92549:CDS 50.0%
ACAGGGGAAAGAGGTGGAAT+TGG + chr4.2:82345055-82345074 None:intergenic 50.0%
ACCACAATCGCATAATCCCC+CGG + chr4.2:82344317-82344336 None:intergenic 50.0%
ATCCACCAGTGTTAGTGGCA+GGG - chr4.2:82342446-82342465 MS.gene92549:intron 50.0%
ATCCATAGATGGAGAACCGG+GGG - chr4.2:82344298-82344317 MS.gene92549:CDS 50.0%
ATGGTCGGGATGAACTTTGG+CGG + chr4.2:82344115-82344134 None:intergenic 50.0%
ATTCCACCTCTTTCCCCTGT+TGG - chr4.2:82345055-82345074 MS.gene92549:CDS 50.0%
CACACCGATACTCCTCAAAC+TGG + chr4.2:82343699-82343718 None:intergenic 50.0%
CACTTCTCTTCGCAGTTTCC+CGG + chr4.2:82342200-82342219 None:intergenic 50.0%
CCAGAAACAACCAGGTTCCT+TGG - chr4.2:82344937-82344956 MS.gene92549:CDS 50.0%
CGGTGTGAATGAATCACTGC+AGG - chr4.2:82343712-82343731 MS.gene92549:CDS 50.0%
CTAAACCGACGGTTGTGAGA+TGG + chr4.2:82343401-82343420 None:intergenic 50.0%
CTCCTGAATCTTCTAGGCGT+TGG - chr4.2:82343522-82343541 MS.gene92549:CDS 50.0%
GAACAGAAGACGAGATCCTG+CGG + chr4.2:82342677-82342696 None:intergenic 50.0%
GATTGTGGTGGTTGGGACAT+AGG - chr4.2:82344328-82344347 MS.gene92549:CDS 50.0%
GCACAGATTCGTCCAGTTTG+AGG - chr4.2:82343684-82343703 MS.gene92549:CDS 50.0%
GTACATGGGTCACCAAACAG+AGG - chr4.2:82344259-82344278 MS.gene92549:CDS 50.0%
GTTGCTTGAGTTTCCACACG+AGG + chr4.2:82344164-82344183 None:intergenic 50.0%
TCCATGGTCGGGATGAACTT+TGG + chr4.2:82344118-82344137 None:intergenic 50.0%
TCCCAACGCCTAGAAGATTC+AGG + chr4.2:82343527-82343546 None:intergenic 50.0%
TTGCCAACGTAAACCTCCTC+TGG + chr4.2:82343086-82343105 None:intergenic 50.0%
! CCAAGGAACCTGGTTGTTTC+TGG + chr4.2:82344940-82344959 None:intergenic 50.0%
!! AGTGGTGGATGGATGAGTCA+CGG - chr4.2:82343929-82343948 MS.gene92549:CDS 50.0%
ACAGCAGCAAGCTCCATGGT+CGG + chr4.2:82344130-82344149 None:intergenic 55.0%
ACCGGGGGATTATGCGATTG+TGG - chr4.2:82344313-82344332 MS.gene92549:CDS 55.0%
ACTCTGCCAACAGGGGAAAG+AGG + chr4.2:82345064-82345083 None:intergenic 55.0%
ATCCCCCGGTTCTCCATCTA+TGG + chr4.2:82344303-82344322 None:intergenic 55.0%
CATCCACCAGTGTTAGTGGC+AGG - chr4.2:82342445-82342464 MS.gene92549:intron 55.0%
CGGGAAACTGCGAAGAGAAG+TGG - chr4.2:82342198-82342217 MS.gene92549:CDS 55.0%
GCCAAAGTTCATCCCGACCA+TGG - chr4.2:82344114-82344133 MS.gene92549:CDS 55.0%
GGGGGATTATGCGATTGTGG+TGG - chr4.2:82344316-82344335 MS.gene92549:CDS 55.0%
GTGAATCAGTTGCCGGAGTC+AGG - chr4.2:82342885-82342904 MS.gene92549:CDS 55.0%
TTCCCTGCCACTAACACTGG+TGG + chr4.2:82342451-82342470 None:intergenic 55.0%
TTGGCGGTCCTTGATCTGTC+TGG + chr4.2:82344099-82344118 None:intergenic 55.0%
! GCTGAGCTGACTTCGCAGAA+GGG - chr4.2:82343368-82343387 MS.gene92549:CDS 55.0%
! TGCTGAGCTGACTTCGCAGA+AGG - chr4.2:82343367-82343386 MS.gene92549:CDS 55.0%
CAGCAGCAAGCTCCATGGTC+GGG + chr4.2:82344129-82344148 None:intergenic 60.0%
CTGCCAACAGGGGAAAGAGG+TGG + chr4.2:82345061-82345080 None:intergenic 60.0%
GCATCAGGCACGCACCATTC+AGG - chr4.2:82343635-82343654 MS.gene92549:CDS 60.0%
GGTGACCCATGTACACCACC+TGG + chr4.2:82344253-82344272 None:intergenic 60.0%
!! CATCGAACTCAAGGCACCGC+AGG - chr4.2:82342658-82342677 MS.gene92549:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 82341940 82345087 82341940 ID=MS.gene92549
chr4.2 mRNA 82341940 82345087 82341940 ID=MS.gene92549.t1;Parent=MS.gene92549
chr4.2 exon 82342583 82345087 82342583 ID=MS.gene92549.t1.exon1;Parent=MS.gene92549.t1
chr4.2 CDS 82342583 82345087 82342583 ID=cds.MS.gene92549.t1;Parent=MS.gene92549.t1
chr4.2 exon 82341940 82342218 82341940 ID=MS.gene92549.t1.exon2;Parent=MS.gene92549.t1
chr4.2 CDS 82341940 82342218 82341940 ID=cds.MS.gene92549.t1;Parent=MS.gene92549.t1
Gene Sequence

>MS.gene92549

ATGCCAATCAATATACAACCAAGTAATGAATTTATGAAACCTTCTGAGGATATGGTATTTGGTTTAGAATTCAAAAAGCTCGGCTCAAAACGGTATAGCAGTTCAAAGACAGCTAAAGAAAGTTCTGCATTGCCGCAAGTAAATCAAAGTCCGAATCCGAAGAGTGCGGATAAGTCGAAGTCAAAGAGTGGTGTTGGTCCTCAATGCAGTGATCTCAAACAGAAGGCAAAGCAGAATGCAGAAGGAAATATTCGGAACCGGGAAACTGCGAAGAGAAGTGGAAATGAAGGTGATGAGCTTGTCAAACACATGTCTAATTTGCCAGGTTATCTACTGCATAATGATAGAGTGGAAAATGTTCAAGAGAAAGCTTTCAATGTTGGTGTTTTAGATTGGTCTCGACTTGAGAACTGGAAGCACACGCATATACCAGAAGATCTAACTAGTCGTTTCACACCATTCAGTAGAGGCGAATCATCATCAAGAGTAGCCACCAAATCAAAATCATCCACCAGTGTTAGTGGCAGGGAAAAACTTGATGATTGGAAAGGTTCGCAACGGATCAGACCGAATAACAGGGATGCACTTCCACAAAGTAGCAAACTTCCCTCTGAGAATGTCAAACGGTTTGAACCTTCTAGAAGTGGATCCAAGAGGATAGGAAGTGAGAAGATGAGGAATGATAATATTAAAAGAACTTCAGATGTTGGAAATTTAGCATCGAACTCAAGGCACCGCAGGATCTCGTCTTCTGTTCCTAATGAAAATAAAGATGATGAAGCTAAGCAGAAAATGGAGGGTTTGCAAGAACACAACCACAAGAAAATAGAGAGAAATCATAAGTCCATATCTGAGATGGAACAGACAACAGTAAAATCAAAAAGCAAAGGGGTCTCATTCAGTTCTAAGAAAACGGGTTCGGGAGAATGCGAATCCAGTCAAAAGGTGAATCAGTTGCCGGAGTCAGGTTTTGATGATAGCCATAAACATAGCCATAGCAAGCCAAGTAATATTGTGCTGCTTTATCCACATGATATTCCTGACTCAAGTTCTTCAGATGATTTTCGGCTTTCGGAATTCCAAACATCATCGGATGAAAATCATCCAGAATCAAGCCGAAGTAGTCTGTCATATGTTTCTATTCCAGAGGAGGTTTACGTTGGCAATGTTTGTCCTGAAATTGCACTTTCAAGTCGATGCCGTTCTGCGATTGAGCATACTTCTTTTTCTGGATCAATGCAAAACAGTGTTAGTACTGATCTCAGTATGAACCGTTCTTCTTCAATTTCTGAGAAGTCTGCTTCCAAAATAAACAAGATGTCTGGTCTGCAATCAGAAGCTGCTTGCTTTGAAAAGGATGTGTTAGACAATAGGCTGAGCAATCAGTCTGCTTTTAATAATCTGATCGAATCATTAGACCAAGAAACTGCTGAGCTGACTTCGCAGAAGGGATCAAATCCATCTCACAACCGTCGGTTTAGCTTCAGCTTAAGTCGAATCGGCAGAAGTTTCAGTTTTAAAGAAGGCCCTGCAGCTTCACAATTTAGTTCTAAGTTTGTCTCTTCAAAGTCAGGTCCAGTGACTCCTGAATCTTCTAGGCGTTGGGATAATTCAAGCAAAGAAAAGGCAAATTGTCAGAACAGAGCAAGATCAAGCCCTCTTAAGAGGTTATTAGATCCTATACTGAAGCATAAGGCATCAGGCACGCACCATTCAGGTGAAAGTAGTCAGAAACAGAAGAGAAGCACAGATTCGTCCAGTTTGAGGAGTATCGGTGTGAATGAATCACTGCAGGATGAAAAGAGCAAGGTATCATCAATCCAAGGTCTCTTGCAGATCACAATTAAAAATGGAATGCCTTTGTTTAAGTTTGTGCTCAATGATGAAAGAAAGATTTACGCCGCTACCAAGAATAGTTTAGCAGCACATGAGAAGAATGATTTAGGCTGCTGTTTTACATTCTATATTGTTAATGAAATTAAGAAAAAGAGTGGTGGATGGATGAGTCACGGAAATAAAGAAAAAAGTTGTGGCTATGCATACAATGTTGTAGCTCAGATGAAATCTTCTACCTCCAAATTCACTGAATCAGTGAATCAGAACTCCAAGAGACAGCATATGGTTAAAGAATATGTCTTATTGGGTGTTCAAATCAACCAGACAGATCAAGGACCGCCAAAGTTCATCCCGACCATGGAGCTTGCTGCTGTTGTTTTTGAGACCTCGTGTGGAAACTCAAGCAACGAACAATTGCATGGTGATAATGATATTATGAAGAAAGGAGAAAATGATAGTTCTACTGTTATTCTTCCAGGTGGTGTACATGGGTCACCAAACAGAGGTGAACCTTCATCGTTAATCCATAGATGGAGAACCGGGGGATTATGCGATTGTGGTGGTTGGGACATAGGTTGCAAACTGCTTGTGCTTTGCGAGCAGAACCTGAGTTCAAACATTCCGAGAAGTTATAAACCTTACCAGGATCGTTTTCAACTTTTTGTTCAGGTATAAACCTTCTACATTCTACTTGGGGCTTGTTTCGATTGGCTTTTTTGAGTTTATCTACTGGTATAAGCACTTGTGAAACTAACTGGGAGAGCTTATGACATGTCCATAAGTTGTTTTTGACTTGTTATTTTCATAAGCTCTTCATGATAGCTTATGAAAACAGCTTATATGAAAAAGATTTGACTTTATGTTATCTCCTGTTATAAAAATAGCTATGCATAGGCACTTATATGATAAACGTTTATGCTACAAACACTTGTTTAAGCTTGTTATCCAAACAAAGTGCATGATGACATTGTGGTATATAATTGTAGACTGTATTGTGGATACTCCATTTACATATGGTTATGATTACTTTCAGGAAGGAGCTGAGAATGATACACCCCATTTCACTTTGTTGCCGTTGAATAATGGATTCTACTCAGTTGAATTCAGTTCAACAATCAGTCATTTACAGGCATTCTTCATATCTGTTTCTTTGTTAAGCTGCCAGAAACAACCAGGTTCCTTGGAAATGAGTAGCATGAGTGTAGAGACCCTTAAGGAACCAAGTTCCAATAACAACAGCAGAAGACTTCAGGGGAAAGCACCTATAAAATATGCACCAATTCCACCTCTTTCCCCTGTTGGCAGAGTTTAA
Protein sequence

>MS.gene92549.t1

MPINIQPSNEFMKPSEDMVFGLEFKKLGSKRYSSSKTAKESSALPQVNQSPNPKSADKSKSKSGVGPQCSDLKQKAKQNAEGNIRNRETAKRSGNEGDELVKHMSNLPGYLLHNDRVENVQEKAFNVGVLDWSRLENWKHTHIPEDLTSRFTPFSRGESSSRVATKSKSSTSVSGREKLDDWKGSQRIRPNNRDALPQSSKLPSENVKRFEPSRSGSKRIGSEKMRNDNIKRTSDVGNLASNSRHRRISSSVPNENKDDEAKQKMEGLQEHNHKKIERNHKSISEMEQTTVKSKSKGVSFSSKKTGSGECESSQKVNQLPESGFDDSHKHSHSKPSNIVLLYPHDIPDSSSSDDFRLSEFQTSSDENHPESSRSSLSYVSIPEEVYVGNVCPEIALSSRCRSAIEHTSFSGSMQNSVSTDLSMNRSSSISEKSASKINKMSGLQSEAACFEKDVLDNRLSNQSAFNNLIESLDQETAELTSQKGSNPSHNRRFSFSLSRIGRSFSFKEGPAASQFSSKFVSSKSGPVTPESSRRWDNSSKEKANCQNRARSSPLKRLLDPILKHKASGTHHSGESSQKQKRSTDSSSLRSIGVNESLQDEKSKVSSIQGLLQITIKNGMPLFKFVLNDERKIYAATKNSLAAHEKNDLGCCFTFYIVNEIKKKSGGWMSHGNKEKSCGYAYNVVAQMKSSTSKFTESVNQNSKRQHMVKEYVLLGVQINQTDQGPPKFIPTMELAAVVFETSCGNSSNEQLHGDNDIMKKGENDSSTVILPGGVHGSPNRGEPSSLIHRWRTGGLCDCGGWDIGCKLLVLCEQNLSSNIPRSYKPYQDRFQLFVQEGAENDTPHFTLLPLNNGFYSVEFSSTISHLQAFFISVSLLSCQKQPGSLEMSSMSVETLKEPSSNNNSRRLQGKAPIKYAPIPPLSPVGRV