AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94056


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94056.t1 MTR_8g044210 98.276 1160 20 0 1 1160 17 1176 0.0 2370
MS.gene94056.t1 MTR_3g007240 77.826 1159 233 7 5 1159 73 1211 0.0 1837
MS.gene94056.t1 MTR_3g007240 76.773 874 179 7 5 874 73 926 0.0 1348
MS.gene94056.t1 MTR_7g073480 58.135 1137 431 10 48 1143 137 1269 0.0 1308
MS.gene94056.t1 MTR_5g037210 37.060 1136 636 20 54 1141 24 1128 0.0 714
MS.gene94056.t1 MTR_6g006910 37.500 1144 645 22 53 1140 37 1166 0.0 690
MS.gene94056.t1 MTR_8g069920 36.545 1100 645 17 70 1127 67 1155 0.0 685
MS.gene94056.t1 MTR_2g099690 36.466 1160 638 29 53 1140 40 1172 0.0 683
MS.gene94056.t1 MTR_4g112430 37.337 1074 615 19 53 1084 38 1095 0.0 681
MS.gene94056.t1 MTR_3g037330 36.762 1118 631 24 62 1127 41 1134 0.0 664
MS.gene94056.t1 MTR_0021s0360 35.784 1129 645 25 53 1127 33 1135 0.0 636
MS.gene94056.t1 MTR_3g037330 36.085 1078 618 23 98 1127 10 1064 0.0 617
MS.gene94056.t1 MTR_2g090610 33.010 1133 655 25 54 1159 3 1058 1.79e-180 559
MS.gene94056.t1 MTR_2g090610 35.132 982 555 21 54 1024 3 913 2.73e-172 533
MS.gene94056.t1 MTR_2g099690 38.384 891 465 24 53 884 40 905 3.99e-172 531
MS.gene94056.t1 MTR_8g018290 35.422 830 455 16 377 1141 14 827 8.46e-156 488
MS.gene94056.t1 MTR_8g018290 35.301 830 463 17 377 1141 14 834 9.77e-155 485
MS.gene94056.t1 MTR_2g099690 36.799 856 457 24 53 849 40 870 3.57e-153 481
MS.gene94056.t1 MTR_8g062150 35.284 564 320 12 54 594 44 585 1.98e-95 317
MS.gene94056.t1 MTR_8g005730 38.596 171 82 4 536 706 16 163 8.43e-25 103
MS.gene94056.t1 MTR_8g005740 32.389 247 84 6 600 821 1 189 3.23e-20 90.5
MS.gene94056.t1 MTR_2g056040 55.172 58 26 0 686 743 1 58 4.17e-15 72.0
MS.gene94056.t1 MTR_4g008650 23.188 414 205 15 360 751 375 697 1.52e-14 79.3
MS.gene94056.t1 MTR_4g008650 23.472 409 210 14 360 751 375 697 1.65e-14 79.0
MS.gene94056.t1 MTR_8g027160 25.143 350 207 10 425 750 352 670 1.59e-11 69.3
MS.gene94056.t1 MTR_8g027160 25.143 350 207 10 425 750 352 670 1.87e-11 69.3
MS.gene94056.t1 MTR_8g027160 25.143 350 207 10 425 750 352 670 2.38e-11 68.6
MS.gene94056.t1 MTR_8g027160 25.143 350 207 10 425 750 352 670 2.95e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94056.t1 AT5G04930 69.629 1159 328 8 5 1160 20 1157 0.0 1701
MS.gene94056.t1 AT3G27870 38.676 1148 619 27 53 1141 37 1158 0.0 718
MS.gene94056.t1 AT1G59820 35.780 1199 668 21 6 1159 11 1152 0.0 713
MS.gene94056.t1 AT3G13900 36.915 1154 640 22 54 1139 41 1174 0.0 697
MS.gene94056.t1 AT3G25610 37.288 1121 639 23 53 1127 39 1141 0.0 694
MS.gene94056.t1 AT1G68710 36.064 1123 653 20 53 1127 41 1146 0.0 689
MS.gene94056.t1 AT1G68710 36.064 1123 653 20 53 1127 41 1146 0.0 689
MS.gene94056.t1 AT1G26130 36.782 1131 630 23 53 1127 41 1142 0.0 687
MS.gene94056.t1 AT1G54280 36.810 1160 635 26 54 1139 41 1176 0.0 686
MS.gene94056.t1 AT1G54280 36.810 1160 635 26 54 1139 41 1176 0.0 686
MS.gene94056.t1 AT1G54280 36.810 1160 635 26 54 1139 41 1176 0.0 686
MS.gene94056.t1 AT1G17500 36.649 1146 651 27 53 1144 40 1164 0.0 685
MS.gene94056.t1 AT1G17500 36.649 1146 651 27 53 1144 40 1164 0.0 685
MS.gene94056.t1 AT1G72700 36.606 1161 646 30 53 1148 40 1175 0.0 684
MS.gene94056.t1 AT1G26130 36.749 1132 630 24 53 1127 41 1143 0.0 684
MS.gene94056.t1 AT1G26130 36.749 1132 630 24 53 1127 41 1143 0.0 684
MS.gene94056.t1 AT1G26130 36.749 1132 630 24 53 1127 41 1143 0.0 684
MS.gene94056.t1 AT1G72700 36.606 1161 646 30 53 1148 40 1175 0.0 684
MS.gene94056.t1 AT1G72700 36.606 1161 646 30 53 1148 40 1175 0.0 684
MS.gene94056.t1 AT1G68710 35.248 1149 653 21 53 1127 41 1172 0.0 677
MS.gene94056.t1 AT3G27870 40.680 971 515 20 53 983 37 986 0.0 667
MS.gene94056.t1 AT1G13210 35.765 1124 655 23 53 1127 37 1142 0.0 664
MS.gene94056.t1 AT3G27870 38.206 992 531 24 207 1141 1 967 0.0 597
MS.gene94056.t1 AT3G13900 38.627 932 499 17 54 928 41 956 0.0 596
MS.gene94056.t1 AT5G44240 33.547 1094 649 19 54 1138 3 1027 0.0 568
MS.gene94056.t1 AT5G44240 33.547 1094 649 19 54 1138 35 1059 0.0 567
MS.gene94056.t1 AT3G13900 36.865 925 504 18 53 924 40 937 1.93e-176 546

Find 232 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAATATCAATGAAGATTT+AGG 0.134302 8.4:-56270867 MS.gene94056:CDS
GACTATTTCGATAGTTATTT+TGG 0.183975 8.4:-56268158 MS.gene94056:CDS
CTACAGAGTCCTCAGCTTTA+TGG 0.189123 8.4:-56268328 MS.gene94056:CDS
AGTTTCAATGCGCTAGTATT+TGG 0.205298 8.4:-56270788 MS.gene94056:CDS
TGTTCCTCTCTTTGCATATT+GGG 0.205345 8.4:-56268218 MS.gene94056:CDS
ATTACCTTATTATAGGAAAT+TGG 0.214718 8.4:-56271105 MS.gene94056:CDS
TGAATCGATTACCTTATTAT+AGG 0.220322 8.4:-56271112 MS.gene94056:CDS
GATTTCTCATGCATCCATTT+GGG 0.234204 8.4:-56268095 MS.gene94056:CDS
GAAAAGAATGTCTGTTATAT+TGG 0.236706 8.4:-56269983 MS.gene94056:CDS
GTTTCAATGCGCTAGTATTT+GGG 0.239935 8.4:-56270787 MS.gene94056:CDS
GATATCCTTGTACATTTCTA+TGG 0.241630 8.4:-56270979 MS.gene94056:CDS
AATCTCTCATTTGTTCTATC+AGG 0.248475 8.4:+56271965 None:intergenic
TTGTTCCTCTCTTTGCATAT+TGG 0.261562 8.4:-56268219 MS.gene94056:CDS
TTGACAAGGATCTTAGTAAA+AGG 0.262036 8.4:-56268357 MS.gene94056:CDS
AGAAAATAACCTATGCATAT+TGG 0.269137 8.4:-56269695 MS.gene94056:CDS
GGAAAGCCGGTATTAAAGTA+TGG 0.277372 8.4:-56269612 MS.gene94056:CDS
CTATGCAGGTTCAATGTCTT+GGG 0.277909 8.4:-56270030 MS.gene94056:intron
TTAACTTTCACCTTCATCTT+TGG 0.278701 8.4:+56270562 None:intergenic
AATGAGAGATTTGAATTTGC+TGG 0.284143 8.4:-56271953 MS.gene94056:CDS
TCTTTGTGCTAATTCTGTTT+TGG 0.290282 8.4:-56268722 MS.gene94056:intron
AAATCCAATTTCCTATAATA+AGG 0.292418 8.4:+56271101 None:intergenic
TAGCAAGTATTGGGGATCTT+TGG 0.295898 8.4:-56268180 MS.gene94056:CDS
TACAGAGTCCTCAGCTTTAT+GGG 0.300068 8.4:-56268327 MS.gene94056:CDS
AAAAGAATGTCTGTTATATT+GGG 0.301829 8.4:-56269982 MS.gene94056:CDS
GGATTTCTCATGCATCCATT+TGG 0.302390 8.4:-56268096 MS.gene94056:CDS
GTCATTTCATTGAGAAGAAA+TGG 0.322837 8.4:-56271661 MS.gene94056:CDS
TCAACTAGGGAAGTCACTTT+TGG 0.326432 8.4:-56272106 MS.gene94056:CDS
TGAATATCAATGAAGATTTA+GGG 0.327800 8.4:-56270866 MS.gene94056:CDS
CAATAGGTTAGGATTGGTTT+TGG 0.334033 8.4:-56271690 MS.gene94056:CDS
GAAAATAACCTATGCATATT+GGG 0.338089 8.4:-56269694 MS.gene94056:CDS
TCGAGAAGTTTGAGAATAGA+AGG 0.341274 8.4:-56267208 MS.gene94056:CDS
GGTTTGAGGACGCTTGTTAT+TGG 0.342303 8.4:-56269829 MS.gene94056:CDS
GTTCAAACTCTTAATCTAGA+TGG 0.343224 8.4:-56271536 MS.gene94056:CDS
CTTCAGTTTGCGCTGCTGTT+TGG 0.350525 8.4:-56271157 MS.gene94056:CDS
TGGCAAGCACGACATTATTC+TGG 0.350578 8.4:-56267334 MS.gene94056:CDS
AATCCATATATATTCCTATT+CGG 0.352270 8.4:+56271419 None:intergenic
GATTAAGTATAGCAATTATA+AGG 0.352400 8.4:+56271840 None:intergenic
CATGAAAAGGAGAGGTTTAG+TGG 0.354836 8.4:-56271461 MS.gene94056:CDS
ATAGAAATGTACAAGGATAT+CGG 0.355230 8.4:+56270981 None:intergenic
CTGTAGATATAGCAAGTATT+GGG 0.355510 8.4:-56268189 MS.gene94056:CDS
CCTATGGCGTTGATTATTGA+TGG 0.358296 8.4:-56269376 MS.gene94056:CDS
TACCGTCACTTCATGGTTAC+TGG 0.358328 8.4:-56268027 MS.gene94056:intron
CAGATAAAGTTGAGAACAAT+AGG 0.358646 8.4:-56271706 MS.gene94056:CDS
TCCTCGAATATTGTACTTAG+AGG 0.362052 8.4:-56271353 MS.gene94056:CDS
GTTTGAGGACGCTTGTTATT+GGG 0.362402 8.4:-56269828 MS.gene94056:CDS
CAACACTAGTGTTATCTTTG+TGG 0.362784 8.4:+56267143 None:intergenic
GTCGTGCAGAAGACGTTTAC+AGG 0.366456 8.4:-56269485 MS.gene94056:CDS
GCTATGCAGGTTCAATGTCT+TGG 0.366620 8.4:-56270031 MS.gene94056:intron
ATTTGAATTTGCTGGGAATT+CGG 0.381074 8.4:-56271945 MS.gene94056:CDS
AAGCCGAATAGGAATATATA+TGG 0.382174 8.4:-56271422 MS.gene94056:CDS
TGACGAGTAGCCAATTGATA+TGG 0.383546 8.4:+56269561 None:intergenic
GAGGTAAGTTATCAATATTA+TGG 0.385325 8.4:-56271065 MS.gene94056:CDS
TATGTCAACGCTTGTTCATC+TGG 0.387878 8.4:+56270379 None:intergenic
GAGTCCAAACCTGTGAGATA+TGG 0.388556 8.4:-56272076 MS.gene94056:CDS
GATGCTATACCGTCACTTCA+TGG 0.388855 8.4:-56268034 MS.gene94056:CDS
CTTATTCTTCTGTGGGTTTG+AGG 0.389069 8.4:-56269843 MS.gene94056:CDS
TAAATCTTCATTGATATTCA+AGG 0.394762 8.4:+56270869 None:intergenic
TCAATTTAAGTTTCATGAAA+AGG 0.397346 8.4:-56271474 MS.gene94056:CDS
TGGGGTTGGCATCAGTGGTC+AGG 0.401702 8.4:-56268883 MS.gene94056:CDS
CTTCACTCTTATTCTTCTGT+GGG 0.407311 8.4:-56269850 MS.gene94056:CDS
CAAGAAACTGCCATATCAAT+TGG 0.409612 8.4:-56269571 MS.gene94056:CDS
TGATCCATATCTCACAGGTT+TGG 0.410264 8.4:+56272072 None:intergenic
AACTTGCTCATTCTCAAGGC+TGG 0.412722 8.4:+56270740 None:intergenic
CGGAAGCTATTGAGTCTCTA+AGG 0.413263 8.4:-56269633 MS.gene94056:CDS
TCATCATCAAGAAGAAGTTC+TGG 0.413308 8.4:-56272136 MS.gene94056:CDS
CTTAGAGACTCAATAGCTTC+CGG 0.418470 8.4:+56269634 None:intergenic
CAGAAGAATAAGAGTGAAGA+TGG 0.418864 8.4:+56269854 None:intergenic
CACATAATGATTGATATTCA+TGG 0.419762 8.4:-56270310 MS.gene94056:CDS
GGAGCTTGTTCGTGTTGGTC+AGG 0.421237 8.4:-56270958 MS.gene94056:CDS
CATGTCGGTTATAGTTTACC+AGG 0.432869 8.4:-56271012 MS.gene94056:CDS
CAAGTACTTCTATGATTGGT+AGG 0.433645 8.4:-56269750 MS.gene94056:CDS
CAAGCTACAATGGAGGTTGA+TGG 0.433886 8.4:-56271395 MS.gene94056:CDS
CAAGTTGAATACTCTCTTCA+AGG 0.436098 8.4:-56270723 MS.gene94056:intron
TTTGAGAATAGAAGGGTCAA+TGG 0.436649 8.4:-56267200 MS.gene94056:CDS
AGTGGATTTGCAAGCAAAGA+TGG 0.436723 8.4:-56270514 MS.gene94056:CDS
ACATATGCTGCCGCTGCCTA+TGG 0.439035 8.4:-56270361 MS.gene94056:CDS
CAACCCCAACATCAGCCATT+TGG 0.441854 8.4:+56268898 None:intergenic
ATTGGGGTGCAATGACAATT+CGG 0.449050 8.4:-56269965 MS.gene94056:CDS
TCTTCACTCTTATTCTTCTG+TGG 0.450704 8.4:-56269851 MS.gene94056:CDS
AAAGTTGAGAACAATAGGTT+AGG 0.450930 8.4:-56271701 MS.gene94056:CDS
ATGCTTCAGAATTTGATCAA+TGG 0.454118 8.4:-56269792 MS.gene94056:CDS
ATTAAAGTATGGGTGTTGAC+TGG 0.454694 8.4:-56269601 MS.gene94056:CDS
TTATTCTGGTTATGTTTGCT+AGG 0.459471 8.4:-56267320 MS.gene94056:CDS
TGGATGTAATCAGGTGGACT+TGG 0.459902 8.4:-56268117 MS.gene94056:CDS
CGATGTATCAATGATCCAAA+TGG 0.463472 8.4:-56268913 MS.gene94056:CDS
ACTGTAGATATAGCAAGTAT+TGG 0.463941 8.4:-56268190 MS.gene94056:CDS
AAATTCAAGGTTTCAGTGTA+GGG 0.465525 8.4:-56270892 MS.gene94056:CDS
CCTGTGAGATATGGATCAAA+GGG 0.466156 8.4:-56272067 MS.gene94056:CDS
GGAGGGTAGGCAAGCTGTAA+TGG 0.466999 8.4:-56268862 MS.gene94056:CDS
TGACAATAGCTGATACGTTA+TGG 0.468397 8.4:-56268261 MS.gene94056:CDS
ATGAGAGATTTGAATTTGCT+GGG 0.468936 8.4:-56271952 MS.gene94056:CDS
GTAGCTCCGTTGCAAAAGGC+TGG 0.475516 8.4:-56269176 MS.gene94056:CDS
TGATCCAAATGGCTGATGTT+GGG 0.475834 8.4:-56268902 MS.gene94056:CDS
GCAGCAAGTACTTCTATGAT+TGG 0.480124 8.4:-56269754 MS.gene94056:CDS
TGAGAACAATAGGTTAGGAT+TGG 0.482905 8.4:-56271696 MS.gene94056:CDS
TGGAGTTGTTTCAACTCCTA+TGG 0.484075 8.4:-56269392 MS.gene94056:CDS
TTGTCTCTCTCGTAAAGAAT+AGG 0.484493 8.4:-56269151 MS.gene94056:CDS
GAGGTTGGCAACTATCTTGA+AGG 0.484584 8.4:-56269424 MS.gene94056:CDS
GATGTTGGGGTTGGCATCAG+TGG 0.487356 8.4:-56268888 MS.gene94056:CDS
AGTCCTCAGCTTTATGGGGC+TGG 0.487402 8.4:-56268322 MS.gene94056:CDS
AATTTGCTGGGAATTCGGTT+CGG 0.487604 8.4:-56271940 MS.gene94056:CDS
GCTGGGAATTCGGTTCGGAC+CGG 0.489295 8.4:-56271935 MS.gene94056:CDS
GGTCAATTTGCACTTGGCCA+TGG 0.490285 8.4:-56268137 MS.gene94056:CDS
GACGCTTGTTATTGGGATGC+GGG 0.490460 8.4:-56269821 MS.gene94056:CDS
ATACGATTTCTTTCTTGCAC+TGG 0.491560 8.4:-56270482 MS.gene94056:CDS
TTAAGTGCGAGAAGCCGAAT+AGG 0.492784 8.4:-56271433 MS.gene94056:CDS
TCCTCTAAGTACAATATTCG+AGG 0.493160 8.4:+56271352 None:intergenic
ATGATGAGGCAACAAATTCA+AGG 0.494420 8.4:-56270905 MS.gene94056:CDS
TAAGTTATCAATATTATGGA+TGG 0.497507 8.4:-56271061 MS.gene94056:CDS
AAGATGCATATGAGGATTGG+AGG 0.498020 8.4:-56271739 MS.gene94056:CDS
TAGAAATGTACAAGGATATC+GGG 0.498250 8.4:+56270982 None:intergenic
AAAATGGCAACAACAATAGT+TGG 0.499937 8.4:+56268379 None:intergenic
GTTCCTCTCTTTGCATATTG+GGG 0.500684 8.4:-56268217 MS.gene94056:CDS
AATCTATCAGCTTGACTGTA+GGG 0.500945 8.4:+56270416 None:intergenic
GGACGCTTGTTATTGGGATG+CGG 0.502399 8.4:-56269822 MS.gene94056:CDS
GGTTGGCATCAGTGGTCAGG+AGG 0.503044 8.4:-56268880 MS.gene94056:CDS
CCCTTTGATCCATATCTCAC+AGG 0.503525 8.4:+56272067 None:intergenic
TCTTATTTGTACACGGACAC+TGG 0.506057 8.4:-56268797 MS.gene94056:CDS
AGAATCTTTGATCATGAAGT+AGG 0.508208 8.4:+56270935 None:intergenic
CAACACCCATACTTTAATAC+CGG 0.510191 8.4:+56269606 None:intergenic
TCGAGTAGCTCCGTTGCAAA+AGG 0.511123 8.4:-56269180 MS.gene94056:CDS
ACTTGGCCATGGATGTAATC+AGG 0.511345 8.4:-56268126 MS.gene94056:CDS
TTAAAGTATGGGTGTTGACT+GGG 0.511818 8.4:-56269600 MS.gene94056:CDS
GGTCTTGAAGCCAAAGATGA+AGG 0.512614 8.4:-56270572 MS.gene94056:CDS
CAAATTCAAGGTTTCAGTGT+AGG 0.513211 8.4:-56270893 MS.gene94056:CDS
CCGACATGAGGAATGTGAAA+AGG 0.513314 8.4:+56271027 None:intergenic
AACGTAGCTGCGTCTGAGGT+TGG 0.513352 8.4:-56269439 MS.gene94056:CDS
ATTTCTCATGCATCCATTTG+GGG 0.515709 8.4:-56268094 MS.gene94056:CDS
CTTGAAATCTGAATATCGTC+GGG 0.518724 8.4:+56267236 None:intergenic
ACTCAGGAGCTCCGTCTAAG+AGG 0.518971 8.4:-56271253 MS.gene94056:CDS
TATCTTGAAGGAAGTTCTGA+TGG 0.520260 8.4:-56269412 MS.gene94056:CDS
ATGCTTATAGAGCGAACCTC+AGG 0.520554 8.4:-56270334 MS.gene94056:CDS
TGATAGTGAACTTGAAGAAG+AGG 0.521242 8.4:-56269332 MS.gene94056:intron
AAAACAAAATCACACGGAAT+CGG 0.522784 8.4:+56271593 None:intergenic
TGCTGTGAAAGATGCATATG+AGG 0.524329 8.4:-56271747 MS.gene94056:CDS
TGACAACAGCTATAAATGAA+TGG 0.524690 8.4:-56268438 MS.gene94056:CDS
TTGCAAGCAAAGATGGAAAA+CGG 0.526412 8.4:-56270507 MS.gene94056:CDS
TGCATGAATTTGATAGTGAT+CGG 0.526715 8.4:-56270005 MS.gene94056:CDS
TCTTGAAATCTGAATATCGT+CGG 0.531604 8.4:+56267235 None:intergenic
AAATGGAAAGATATTAGAGT+TGG 0.535651 8.4:-56271644 MS.gene94056:CDS
TGAAAGATGCATATGAGGAT+TGG 0.536868 8.4:-56271742 MS.gene94056:CDS
TCTATGGAGCTTGTTCGTGT+TGG 0.538618 8.4:-56270963 MS.gene94056:CDS
TAAACTGCAGCAAGGTGTAC+CGG 0.538892 8.4:-56269653 MS.gene94056:CDS
ACCTGTGAGATATGGATCAA+AGG 0.539126 8.4:-56272068 MS.gene94056:CDS
GTCAAGCTGATAGATTATCA+AGG 0.540142 8.4:-56270409 MS.gene94056:CDS
ATTGAATACAGACATAATAC+AGG 0.540454 8.4:-56269887 MS.gene94056:CDS
CACTATCAAGAATATATACA+AGG 0.541563 8.4:+56269347 None:intergenic
AACTGTTCAAACAAATTCCT+AGG 0.542452 8.4:+56271887 None:intergenic
AGAAGTACTTGCTGCCTCAA+AGG 0.546382 8.4:+56269762 None:intergenic
GTTGGCATCAGTGGTCAGGA+GGG 0.546555 8.4:-56268879 MS.gene94056:CDS
TAGGGCTGCTTTGCTTCGCA+AGG 0.549839 8.4:-56269731 MS.gene94056:CDS
ATCAAGAATATATACAAGGC+TGG 0.550049 8.4:+56269351 None:intergenic
GTGAGTCTAATTTGAAGACT+AGG 0.551484 8.4:-56271514 MS.gene94056:CDS
AAGTTATCAATATTATGGAT+GGG 0.551657 8.4:-56271060 MS.gene94056:CDS
GAAAGCCGGTATTAAAGTAT+GGG 0.552040 8.4:-56269611 MS.gene94056:CDS
ACAGAGTCCTCAGCTTTATG+GGG 0.554892 8.4:-56268326 MS.gene94056:CDS
ATTCAACTTGCTCATTCTCA+AGG 0.555225 8.4:+56270736 None:intergenic
GCATCAGTGGTCAGGAGGGT+AGG 0.555914 8.4:-56268875 MS.gene94056:CDS
CACTCTGACTGAGAACAAGA+TGG 0.558857 8.4:-56270811 MS.gene94056:CDS
ATGATCCAAATGGCTGATGT+TGG 0.559216 8.4:-56268903 MS.gene94056:CDS
TGCAACTTTCATATGTGTCA+TGG 0.559490 8.4:-56268062 MS.gene94056:CDS
TCAATATTATGGATGGGGAG+TGG 0.560880 8.4:-56271054 MS.gene94056:CDS
TAATCTATCAGCTTGACTGT+AGG 0.565808 8.4:+56270415 None:intergenic
AAGAATACTAATTGTGTGGT+TGG 0.566670 8.4:-56271320 MS.gene94056:CDS
TCAAGCTGATAGATTATCAA+GGG 0.569002 8.4:-56270408 MS.gene94056:CDS
ATGACTCTAGCCATCGGAGA+TGG 0.569025 8.4:-56269119 MS.gene94056:intron
TTACCAACGACTAGGCTACA+TGG 0.572195 8.4:-56268772 MS.gene94056:CDS
TATGCAGGTTCAATGTCTTG+GGG 0.575323 8.4:-56270029 MS.gene94056:intron
GTTGGTGTTGCCGTGTATTG+TGG 0.575445 8.4:-56271302 MS.gene94056:CDS
TTAAGTTTCATGAAAAGGAG+AGG 0.577127 8.4:-56271469 MS.gene94056:CDS
AGTCCACCTGATTACATCCA+TGG 0.578614 8.4:+56268120 None:intergenic
ATTGAGTCTCTAAGGAAAGC+CGG 0.578620 8.4:-56269625 MS.gene94056:CDS
AAATCAGTGATGAAGATGCT+AGG 0.579456 8.4:-56272006 MS.gene94056:CDS
AGTTATCAATATTATGGATG+GGG 0.580201 8.4:-56271059 MS.gene94056:CDS
CTCTATAAGCATAAAACCAT+AGG 0.580922 8.4:+56270345 None:intergenic
TAGCTCCGTTGCAAAAGGCT+GGG 0.582525 8.4:-56269175 MS.gene94056:CDS
TCAAGACGGCTCCTCTTAGA+CGG 0.582988 8.4:+56271242 None:intergenic
CAAATGGCTGATGTTGGGGT+TGG 0.584450 8.4:-56268897 MS.gene94056:CDS
TTCTGGTAGAAATTCAACTA+GGG 0.587363 8.4:-56272119 MS.gene94056:CDS
GTTCCTCTCTTATTTGTACA+CGG 0.589784 8.4:-56268804 MS.gene94056:CDS
ATATGGATTTCAAGCTACAA+TGG 0.591040 8.4:-56271405 MS.gene94056:CDS
GTTCTGGTAGAAATTCAACT+AGG 0.591194 8.4:-56272120 MS.gene94056:CDS
AGTTCATTTGTGTCTCAAGA+CGG 0.592225 8.4:+56271228 None:intergenic
TATCAGCTTGACTGTAGGGT+CGG 0.595910 8.4:+56270420 None:intergenic
TTTCAATGCGCTAGTATTTG+GGG 0.596349 8.4:-56270786 MS.gene94056:CDS
TTTCTCATGCATCCATTTGG+GGG 0.597711 8.4:-56268093 MS.gene94056:CDS
CGGTAGCGCCCAATATGCAT+AGG 0.597956 8.4:+56269686 None:intergenic
CACTGGAATTACCAACGACT+AGG 0.598882 8.4:-56268780 MS.gene94056:CDS
AAAGCTATGCTCAACAACTC+AGG 0.598989 8.4:-56271269 MS.gene94056:CDS
AAGTACTTCTATGATTGGTA+GGG 0.600513 8.4:-56269749 MS.gene94056:CDS
GATCCAAATGGCTGATGTTG+GGG 0.600913 8.4:-56268901 MS.gene94056:CDS
CGTCTCACGACCACAATACA+CGG 0.601943 8.4:+56271292 None:intergenic
AAAGAATGTCTGTTATATTG+GGG 0.603285 8.4:-56269981 MS.gene94056:CDS
AGGATATCGGGATCATAACC+TGG 0.604549 8.4:+56270994 None:intergenic
AAGCATAAAACCATAGGCAG+CGG 0.609256 8.4:+56270351 None:intergenic
CCATCAATAATCAACGCCAT+AGG 0.614847 8.4:+56269376 None:intergenic
CGAGAAGTTTGAGAATAGAA+GGG 0.615333 8.4:-56267207 MS.gene94056:CDS
GCACCATGTAGCCTAGTCGT+TGG 0.617009 8.4:+56268769 None:intergenic
TCGGATGTGTCAACAACAAG+AGG 0.617316 8.4:+56270439 None:intergenic
ACAAGAAGAACAAAAGCCAA+TGG 0.621288 8.4:+56271773 None:intergenic
AAGCTCCATAGAAATGTACA+AGG 0.624504 8.4:+56270974 None:intergenic
TTTGGTCTCAGTGAATGGAA+AGG 0.626806 8.4:-56270593 MS.gene94056:intron
TTGTCGGCGAGTGATCCTAC+CGG 0.632123 8.4:-56271569 MS.gene94056:CDS
AGAAGAATAAGAGTGAAGAT+GGG 0.633351 8.4:+56269855 None:intergenic
TCGTCAAAGCTACTAACAAG+CGG 0.635770 8.4:-56269544 MS.gene94056:CDS
TCCGATGGCTAGAGTCATGT+CGG 0.637075 8.4:+56269124 None:intergenic
GATGGAAAGAGATTGTCACT+TGG 0.637955 8.4:-56271377 MS.gene94056:CDS
CTTCCCCAATATGCAAAGAG+AGG 0.638044 8.4:+56268214 None:intergenic
ATCAATCATTATGTGACCTG+AGG 0.639691 8.4:+56270318 None:intergenic
CTGCAGTTTATCTTCAATAG+CGG 0.645080 8.4:+56269666 None:intergenic
AGATACCATACCATCTCCGA+TGG 0.645447 8.4:+56269109 None:intergenic
AGATTCTAGATTGTATGATG+AGG 0.647520 8.4:-56270919 MS.gene94056:CDS
TACCAGTAACCATGAAGTGA+CGG 0.649664 8.4:+56268025 None:intergenic
TGAACATAAGCAACACCGGT+AGG 0.652658 8.4:+56271554 None:intergenic
TGTAGATATAGCAAGTATTG+GGG 0.656699 8.4:-56268188 MS.gene94056:CDS
TGGATTTCAAGCTACAATGG+AGG 0.657601 8.4:-56271402 MS.gene94056:CDS
CTCTCTCGTAAAGAATAGGA+CGG 0.658957 8.4:-56269147 MS.gene94056:CDS
GCCGACATGACTCTAGCCAT+CGG 0.659172 8.4:-56269125 MS.gene94056:CDS
TGGCCATGGATGTAATCAGG+TGG 0.664998 8.4:-56268123 MS.gene94056:CDS
TGTCCAGCCCCATAAAGCTG+AGG 0.666629 8.4:+56268319 None:intergenic
TAAAGTATGGGTGTTGACTG+GGG 0.668570 8.4:-56269599 MS.gene94056:CDS
TACTCGACAACAAAGAACAA+CGG 0.673269 8.4:+56269196 None:intergenic
ACTTAAGAATACTAATTGTG+TGG 0.675064 8.4:-56271324 MS.gene94056:CDS
TGTCCGTGTACAAATAAGAG+AGG 0.679867 8.4:+56268801 None:intergenic
AGTTTGAACATAAGCAACAC+CGG 0.682795 8.4:+56271550 None:intergenic
TGGGGCTGGACAAAGACAAG+AGG 0.684412 8.4:-56268308 MS.gene94056:CDS
ATTGAAGATAAACTGCAGCA+AGG 0.685229 8.4:-56269661 MS.gene94056:CDS
CAAGCTGATAGATTATCAAG+GGG 0.688461 8.4:-56270407 MS.gene94056:CDS
GGTAAACTATAACCGACATG+AGG 0.690892 8.4:+56271015 None:intergenic
ATATTCATGGAGAACAACAA+AGG 0.691556 8.4:-56270297 MS.gene94056:intron
GACAACAAAACAAAATCACA+CGG 0.692270 8.4:+56271587 None:intergenic
ATAAACTTTACAACAAAACG+TGG 0.694069 8.4:+56267275 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATTTTATTATGTTTTAAAA+TGG - chr8.4:56271438-56271457 MS.gene94056:CDS 10.0%
!!! TTTATTTTTGTGTTGTTATT+TGG - chr8.4:56268688-56268707 MS.gene94056:intron 15.0%
!! AAAAGAATGTCTGTTATATT+GGG - chr8.4:56269317-56269336 MS.gene94056:intron 20.0%
!! AAATCCAATTTCCTATAATA+AGG + chr8.4:56268201-56268220 None:intergenic 20.0%
!! AAGTTATCAATATTATGGAT+GGG - chr8.4:56268239-56268258 MS.gene94056:CDS 20.0%
!! AATCCATATATATTCCTATT+CGG + chr8.4:56267883-56267902 None:intergenic 20.0%
!! ATTACCTTATTATAGGAAAT+TGG - chr8.4:56268194-56268213 MS.gene94056:CDS 20.0%
!! GAAAATGGAAAAGAAATAAA+AGG - chr8.4:56270276-56270295 MS.gene94056:intron 20.0%
!! GATTAAGTATAGCAATTATA+AGG + chr8.4:56267462-56267481 None:intergenic 20.0%
!! TAAATCTTCATTGATATTCA+AGG + chr8.4:56268433-56268452 None:intergenic 20.0%
!! TAAGTTATCAATATTATGGA+TGG - chr8.4:56268238-56268257 MS.gene94056:CDS 20.0%
!! TGAATATCAATGAAGATTTA+GGG - chr8.4:56268433-56268452 MS.gene94056:CDS 20.0%
!! TTGAATATCAATGAAGATTT+AGG - chr8.4:56268432-56268451 MS.gene94056:CDS 20.0%
!!! AGTTATAAAAGAGTATTTTC+CGG + chr8.4:56267386-56267405 None:intergenic 20.0%
!!! GCAAATTAAATATGTCTTTT+CGG - chr8.4:56268455-56268474 MS.gene94056:CDS 20.0%
!!! TCAATTTAAGTTTCATGAAA+AGG - chr8.4:56267825-56267844 MS.gene94056:intron 20.0%
! AAAGAATGTCTGTTATATTG+GGG - chr8.4:56269318-56269337 MS.gene94056:intron 25.0%
! AAATACAAGGATAGAGAAAA+TGG - chr8.4:56270261-56270280 MS.gene94056:intron 25.0%
! AAATGGAAAGATATTAGAGT+TGG - chr8.4:56267655-56267674 MS.gene94056:intron 25.0%
! AACATAAAAATGTCTGTTTG+GGG + chr8.4:56269071-56269090 None:intergenic 25.0%
! AATAATGAGAACGAAATACA+AGG - chr8.4:56270248-56270267 MS.gene94056:intron 25.0%
! ACTTAAGAATACTAATTGTG+TGG - chr8.4:56267975-56267994 MS.gene94056:intron 25.0%
! AGAAAATAACCTATGCATAT+TGG - chr8.4:56269604-56269623 MS.gene94056:CDS 25.0%
! AGGCACATATAGAAATAAAT+TGG + chr8.4:56270686-56270705 None:intergenic 25.0%
! AGTTATCAATATTATGGATG+GGG - chr8.4:56268240-56268259 MS.gene94056:CDS 25.0%
! ATAAACTTTACAACAAAACG+TGG + chr8.4:56272027-56272046 None:intergenic 25.0%
! ATAGAAATGTACAAGGATAT+CGG + chr8.4:56268321-56268340 None:intergenic 25.0%
! ATTGAATACAGACATAATAC+AGG - chr8.4:56269412-56269431 MS.gene94056:CDS 25.0%
! ATTTCGTTCTCATTATTTGA+AGG + chr8.4:56270245-56270264 None:intergenic 25.0%
! CAACATAAAAATGTCTGTTT+GGG + chr8.4:56269072-56269091 None:intergenic 25.0%
! CACATAATGATTGATATTCA+TGG - chr8.4:56268989-56269008 MS.gene94056:intron 25.0%
! CACTATCAAGAATATATACA+AGG + chr8.4:56269955-56269974 None:intergenic 25.0%
! CATAAAAAAAGGACTACTTT+GGG + chr8.4:56269232-56269251 None:intergenic 25.0%
! GAAAAGAATGTCTGTTATAT+TGG - chr8.4:56269316-56269335 MS.gene94056:intron 25.0%
! GAAAATAACCTATGCATATT+GGG - chr8.4:56269605-56269624 MS.gene94056:CDS 25.0%
! GAGGTAAGTTATCAATATTA+TGG - chr8.4:56268234-56268253 MS.gene94056:CDS 25.0%
! TCAACATAAAAATGTCTGTT+TGG + chr8.4:56269073-56269092 None:intergenic 25.0%
! TCATAAAAAAAGGACTACTT+TGG + chr8.4:56269233-56269252 None:intergenic 25.0%
! TGAATCGATTACCTTATTAT+AGG - chr8.4:56268187-56268206 MS.gene94056:CDS 25.0%
! TTTCGTTCTCATTATTTGAA+GGG + chr8.4:56270244-56270263 None:intergenic 25.0%
!! CCTACAACAAAAAATTGTTT+TGG - chr8.4:56271014-56271033 MS.gene94056:CDS 25.0%
!! CTTTTATAACTTTTCTTCCT+AGG - chr8.4:56267395-56267414 MS.gene94056:intron 25.0%
!! TTGATTTTGCAATCCATAAA+GGG + chr8.4:56271614-56271633 None:intergenic 25.0%
!! TTTATGAATGCTCTCATTTT+GGG - chr8.4:56269246-56269265 MS.gene94056:intron 25.0%
!! TTTTATGAATGCTCTCATTT+TGG - chr8.4:56269245-56269264 MS.gene94056:intron 25.0%
!!! AGGAAATTGGATTTTTCAAA+GGG - chr8.4:56268207-56268226 MS.gene94056:CDS 25.0%
!!! ATGAGAGCATTCATAAAAAA+AGG + chr8.4:56269243-56269262 None:intergenic 25.0%
!!! ATTGATTTTGCAATCCATAA+AGG + chr8.4:56271615-56271634 None:intergenic 25.0%
!!! CCAAAACAATTTTTTGTTGT+AGG + chr8.4:56271017-56271036 None:intergenic 25.0%
!!! TAGGAAATTGGATTTTTCAA+AGG - chr8.4:56268206-56268225 MS.gene94056:CDS 25.0%
!!! TTAGAATGATTTGCTGTTAA+TGG - chr8.4:56269104-56269123 MS.gene94056:intron 25.0%
AAAACAAAATCACACGGAAT+CGG + chr8.4:56267709-56267728 None:intergenic 30.0%
AAAATGGCAACAACAATAGT+TGG + chr8.4:56270923-56270942 None:intergenic 30.0%
AAAGTTGAGAACAATAGGTT+AGG - chr8.4:56267598-56267617 MS.gene94056:intron 30.0%
AAATTCAAGGTTTCAGTGTA+GGG - chr8.4:56268407-56268426 MS.gene94056:CDS 30.0%
AACTGTTCAAACAAATTCCT+AGG + chr8.4:56267415-56267434 None:intergenic 30.0%
AAGAATACTAATTGTGTGGT+TGG - chr8.4:56267979-56267998 MS.gene94056:intron 30.0%
AAGCCGAATAGGAATATATA+TGG - chr8.4:56267877-56267896 MS.gene94056:intron 30.0%
AAGTACTTCTATGATTGGTA+GGG - chr8.4:56269550-56269569 MS.gene94056:CDS 30.0%
AATCTCTCATTTGTTCTATC+AGG + chr8.4:56267337-56267356 None:intergenic 30.0%
AATGAGAGATTTGAATTTGC+TGG - chr8.4:56267346-56267365 MS.gene94056:CDS 30.0%
ACTAAGATCCTTGTCAAAAA+TGG + chr8.4:56270939-56270958 None:intergenic 30.0%
ACTGTAGATATAGCAAGTAT+TGG - chr8.4:56271109-56271128 MS.gene94056:CDS 30.0%
AGAAGAATAAGAGTGAAGAT+GGG + chr8.4:56269447-56269466 None:intergenic 30.0%
AGAATCTTTGATCATGAAGT+AGG + chr8.4:56268367-56268386 None:intergenic 30.0%
AGATTCTAGATTGTATGATG+AGG - chr8.4:56268380-56268399 MS.gene94056:CDS 30.0%
ATATGGATTTCAAGCTACAA+TGG - chr8.4:56267894-56267913 MS.gene94056:intron 30.0%
ATATTCATGGAGAACAACAA+AGG - chr8.4:56269002-56269021 MS.gene94056:intron 30.0%
ATCAAGAATATATACAAGGC+TGG + chr8.4:56269951-56269970 None:intergenic 30.0%
ATCTTACAAGTCAACTTTGT+AGG - chr8.4:56271704-56271723 MS.gene94056:CDS 30.0%
ATGCTTCAGAATTTGATCAA+TGG - chr8.4:56269507-56269526 MS.gene94056:CDS 30.0%
CAGATAAAGTTGAGAACAAT+AGG - chr8.4:56267593-56267612 MS.gene94056:intron 30.0%
CTCTATAAGCATAAAACCAT+AGG + chr8.4:56268957-56268976 None:intergenic 30.0%
CTGTAGATATAGCAAGTATT+GGG - chr8.4:56271110-56271129 MS.gene94056:CDS 30.0%
CTTATGCAATTAGCAAAAAG+TGG - chr8.4:56268767-56268786 MS.gene94056:CDS 30.0%
CTTTCTCCTTCATATGTTAT+AGG - chr8.4:56270357-56270376 MS.gene94056:CDS 30.0%
GACAACAAAACAAAATCACA+CGG + chr8.4:56267715-56267734 None:intergenic 30.0%
GATATCCTTGTACATTTCTA+TGG - chr8.4:56268320-56268339 MS.gene94056:CDS 30.0%
GTCATTTCATTGAGAAGAAA+TGG - chr8.4:56267638-56267657 MS.gene94056:intron 30.0%
GTTCAAACTCTTAATCTAGA+TGG - chr8.4:56267763-56267782 MS.gene94056:intron 30.0%
TAGAAATGTACAAGGATATC+GGG + chr8.4:56268320-56268339 None:intergenic 30.0%
TCAAGCTGATAGATTATCAA+GGG - chr8.4:56268891-56268910 MS.gene94056:CDS 30.0%
TCTTACAAGTCAACTTTGTA+GGG - chr8.4:56271705-56271724 MS.gene94056:CDS 30.0%
TCTTGAAATCTGAATATCGT+CGG + chr8.4:56272067-56272086 None:intergenic 30.0%
TGACAACAGCTATAAATGAA+TGG - chr8.4:56270861-56270880 MS.gene94056:CDS 30.0%
TTAACTTTCACCTTCATCTT+TGG + chr8.4:56268740-56268759 None:intergenic 30.0%
TTAAGTTTCATGAAAAGGAG+AGG - chr8.4:56267830-56267849 MS.gene94056:intron 30.0%
TTAGCACCTATAACATATGA+AGG + chr8.4:56270366-56270385 None:intergenic 30.0%
TTCTGGTAGAAATTCAACTA+GGG - chr8.4:56267180-56267199 MS.gene94056:CDS 30.0%
TTGACAAGGATCTTAGTAAA+AGG - chr8.4:56270942-56270961 MS.gene94056:CDS 30.0%
! ATGAGAGATTTGAATTTGCT+GGG - chr8.4:56267347-56267366 MS.gene94056:CDS 30.0%
! GGAAAAGAAATAAAAGGCAT+CGG - chr8.4:56270282-56270301 MS.gene94056:intron 30.0%
! TCTTTGTGCTAATTCTGTTT+TGG - chr8.4:56270577-56270596 MS.gene94056:CDS 30.0%
! TGATTTTGCAATCCATAAAG+GGG + chr8.4:56271613-56271632 None:intergenic 30.0%
! TGTAGATATAGCAAGTATTG+GGG - chr8.4:56271111-56271130 MS.gene94056:CDS 30.0%
! TTATTCTGGTTATGTTTGCT+AGG - chr8.4:56271979-56271998 MS.gene94056:CDS 30.0%
!! ATTTGAATTTGCTGGGAATT+CGG - chr8.4:56267354-56267373 MS.gene94056:intron 30.0%
!! CAAAGTTGACTTGTAAGATA+AGG + chr8.4:56271703-56271722 None:intergenic 30.0%
!! TGCATGAATTTGATAGTGAT+CGG - chr8.4:56269294-56269313 MS.gene94056:intron 30.0%
!! TGTTTCTATCCTAGTCTTAT+TGG - chr8.4:56271764-56271783 MS.gene94056:CDS 30.0%
!!! GTGTGATTTTGTTTTGTTGT+CGG - chr8.4:56267714-56267733 MS.gene94056:intron 30.0%
!!! TATTTTGGTCAATTTGCACT+TGG - chr8.4:56271156-56271175 MS.gene94056:CDS 30.0%
!!! TTAGGATTGGTTTTGGTTAA+TGG - chr8.4:56267616-56267635 MS.gene94056:intron 30.0%
AAATCAGTGATGAAGATGCT+AGG - chr8.4:56267293-56267312 MS.gene94056:CDS 35.0%
AAGCTCCATAGAAATGTACA+AGG + chr8.4:56268328-56268347 None:intergenic 35.0%
AATAAGTCTACGTTGGATAG+TGG - chr8.4:56271642-56271661 MS.gene94056:CDS 35.0%
AATCTATCAGCTTGACTGTA+GGG + chr8.4:56268886-56268905 None:intergenic 35.0%
ACAAGAAGAACAAAAGCCAA+TGG + chr8.4:56267529-56267548 None:intergenic 35.0%
ACATGTGTACAAAACTTTGC+AGG - chr8.4:56271929-56271948 MS.gene94056:CDS 35.0%
ACTATTTAAGCCATCCAATG+TGG + chr8.4:56271850-56271869 None:intergenic 35.0%
AGTTCATTTGTGTCTCAAGA+CGG + chr8.4:56268074-56268093 None:intergenic 35.0%
AGTTTCAATGCGCTAGTATT+TGG - chr8.4:56268511-56268530 MS.gene94056:intron 35.0%
AGTTTGAACATAAGCAACAC+CGG + chr8.4:56267752-56267771 None:intergenic 35.0%
ATACGATTTCTTTCTTGCAC+TGG - chr8.4:56268817-56268836 MS.gene94056:CDS 35.0%
ATCAATCATTATGTGACCTG+AGG + chr8.4:56268984-56269003 None:intergenic 35.0%
ATGATGAGGCAACAAATTCA+AGG - chr8.4:56268394-56268413 MS.gene94056:CDS 35.0%
ATTGAAGATAAACTGCAGCA+AGG - chr8.4:56269638-56269657 MS.gene94056:CDS 35.0%
ATTTCTCATGCATCCATTTG+GGG - chr8.4:56271205-56271224 MS.gene94056:CDS 35.0%
CAAATTCAAGGTTTCAGTGT+AGG - chr8.4:56268406-56268425 MS.gene94056:CDS 35.0%
CAACACCCATACTTTAATAC+CGG + chr8.4:56269696-56269715 None:intergenic 35.0%
CAAGAAACTGCCATATCAAT+TGG - chr8.4:56269728-56269747 MS.gene94056:CDS 35.0%
CAAGCTGATAGATTATCAAG+GGG - chr8.4:56268892-56268911 MS.gene94056:CDS 35.0%
CAAGTACTTCTATGATTGGT+AGG - chr8.4:56269549-56269568 MS.gene94056:CDS 35.0%
CAGAAGAATAAGAGTGAAGA+TGG + chr8.4:56269448-56269467 None:intergenic 35.0%
CATGACATGACATGACTAAT+TGG + chr8.4:56271373-56271392 None:intergenic 35.0%
CATGTGTACAAAACTTTGCA+GGG - chr8.4:56271930-56271949 MS.gene94056:CDS 35.0%
CCAACGTAGACTTATTTAAG+AGG + chr8.4:56271638-56271657 None:intergenic 35.0%
CCTCTTAAATAAGTCTACGT+TGG - chr8.4:56271635-56271654 MS.gene94056:CDS 35.0%
CGAGAAGTTTGAGAATAGAA+GGG - chr8.4:56272092-56272111 MS.gene94056:CDS 35.0%
CGATGTATCAATGATCCAAA+TGG - chr8.4:56270386-56270405 MS.gene94056:CDS 35.0%
CTGCAGTTTATCTTCAATAG+CGG + chr8.4:56269636-56269655 None:intergenic 35.0%
CTTCACTCTTATTCTTCTGT+GGG - chr8.4:56269449-56269468 MS.gene94056:CDS 35.0%
CTTGAAATCTGAATATCGTC+GGG + chr8.4:56272066-56272085 None:intergenic 35.0%
GAAAGCCGGTATTAAAGTAT+GGG - chr8.4:56269688-56269707 MS.gene94056:CDS 35.0%
GATTTCTCATGCATCCATTT+GGG - chr8.4:56271204-56271223 MS.gene94056:CDS 35.0%
GTCAAGCTGATAGATTATCA+AGG - chr8.4:56268890-56268909 MS.gene94056:CDS 35.0%
GTGAGTCTAATTTGAAGACT+AGG - chr8.4:56267785-56267804 MS.gene94056:intron 35.0%
GTTCTGGTAGAAATTCAACT+AGG - chr8.4:56267179-56267198 MS.gene94056:CDS 35.0%
GTTTCAATGCGCTAGTATTT+GGG - chr8.4:56268512-56268531 MS.gene94056:intron 35.0%
TAAAGCAGTTGAAGGAGTTA+AGG + chr8.4:56269194-56269213 None:intergenic 35.0%
TAATCTATCAGCTTGACTGT+AGG + chr8.4:56268887-56268906 None:intergenic 35.0%
TACTCGACAACAAAGAACAA+CGG + chr8.4:56270106-56270125 None:intergenic 35.0%
TCATCATCAAGAAGAAGTTC+TGG - chr8.4:56267163-56267182 MS.gene94056:CDS 35.0%
TCCTCGAATATTGTACTTAG+AGG - chr8.4:56267946-56267965 MS.gene94056:intron 35.0%
TCCTCTAAGTACAATATTCG+AGG + chr8.4:56267950-56267969 None:intergenic 35.0%
TCGAGAAGTTTGAGAATAGA+AGG - chr8.4:56272091-56272110 MS.gene94056:CDS 35.0%
TCTTCACTCTTATTCTTCTG+TGG - chr8.4:56269448-56269467 MS.gene94056:CDS 35.0%
TGAAAGATGCATATGAGGAT+TGG - chr8.4:56267557-56267576 MS.gene94056:intron 35.0%
TGACAATAGCTGATACGTTA+TGG - chr8.4:56271038-56271057 MS.gene94056:CDS 35.0%
TGAGAACAATAGGTTAGGAT+TGG - chr8.4:56267603-56267622 MS.gene94056:intron 35.0%
TGCAACTTTCATATGTGTCA+TGG - chr8.4:56271237-56271256 MS.gene94056:CDS 35.0%
TGTTCCAAATGTTCAATCCT+AGG - chr8.4:56271800-56271819 MS.gene94056:CDS 35.0%
TGTTCCTCTCTTTGCATATT+GGG - chr8.4:56271081-56271100 MS.gene94056:CDS 35.0%
TTGCAAGCAAAGATGGAAAA+CGG - chr8.4:56268792-56268811 MS.gene94056:CDS 35.0%
TTGTCTCTCTCGTAAAGAAT+AGG - chr8.4:56270148-56270167 MS.gene94056:intron 35.0%
TTGTTCCTCTCTTTGCATAT+TGG - chr8.4:56271080-56271099 MS.gene94056:CDS 35.0%
TTTCAATGCGCTAGTATTTG+GGG - chr8.4:56268513-56268532 MS.gene94056:intron 35.0%
TTTGAGAATAGAAGGGTCAA+TGG - chr8.4:56272099-56272118 MS.gene94056:CDS 35.0%
! AATGGCTTCAGATTTTGCAA+TGG - chr8.4:56270455-56270474 MS.gene94056:CDS 35.0%
! AGGTGTATCAATTTTGCCAT+TGG - chr8.4:56267510-56267529 MS.gene94056:intron 35.0%
! ATGGCTTCAGATTTTGCAAT+GGG - chr8.4:56270456-56270475 MS.gene94056:CDS 35.0%
! ATTCAACTTGCTCATTCTCA+AGG + chr8.4:56268566-56268585 None:intergenic 35.0%
! CAAGTTGAATACTCTCTTCA+AGG - chr8.4:56268576-56268595 MS.gene94056:intron 35.0%
! GTTCCTCTCTTATTTGTACA+CGG - chr8.4:56270495-56270514 MS.gene94056:CDS 35.0%
! TATCTTGAAGGAAGTTCTGA+TGG - chr8.4:56269887-56269906 MS.gene94056:CDS 35.0%
! TATGTCTTTTCGGACAAAAC+TGG - chr8.4:56268465-56268484 MS.gene94056:CDS 35.0%
! TGATAGTGAACTTGAAGAAG+AGG - chr8.4:56269967-56269986 MS.gene94056:CDS 35.0%
! TGTTATTTGGTCTCAGTGAA+TGG - chr8.4:56268701-56268720 MS.gene94056:intron 35.0%
!! ATTAAAGTATGGGTGTTGAC+TGG - chr8.4:56269698-56269717 MS.gene94056:CDS 35.0%
!! GGATTTTTCAAAGGGAAAAG+AGG - chr8.4:56268215-56268234 MS.gene94056:CDS 35.0%
!! TACTTTGGGACCTAATTCAA+GGG + chr8.4:56269218-56269237 None:intergenic 35.0%
!! TTAAAGTATGGGTGTTGACT+GGG - chr8.4:56269699-56269718 MS.gene94056:CDS 35.0%
!! TTACCTCAACTAGCTGTTTT+TGG - chr8.4:56267484-56267503 MS.gene94056:intron 35.0%
!!! CAATAGGTTAGGATTGGTTT+TGG - chr8.4:56267609-56267628 MS.gene94056:intron 35.0%
!!! TGTTGTTGCCATTTTTGACA+AGG - chr8.4:56270928-56270947 MS.gene94056:CDS 35.0%
AAACTATGACCATTGCTCTG+TGG - chr8.4:56270747-56270766 MS.gene94056:CDS 40.0%
AAAGCTATGCTCAACAACTC+AGG - chr8.4:56268030-56268049 MS.gene94056:CDS 40.0%
AAGATGCATATGAGGATTGG+AGG - chr8.4:56267560-56267579 MS.gene94056:intron 40.0%
AAGCATAAAACCATAGGCAG+CGG + chr8.4:56268951-56268970 None:intergenic 40.0%
ACCTGTGAGATATGGATCAA+AGG - chr8.4:56267231-56267250 MS.gene94056:CDS 40.0%
ACTGCTTTAGCCCTTGAATT+AGG - chr8.4:56269205-56269224 MS.gene94056:CDS 40.0%
ATCCAACGCTGTAAAACACA+AGG - chr8.4:56271319-56271338 MS.gene94056:CDS 40.0%
ATGATCCAAATGGCTGATGT+TGG - chr8.4:56270396-56270415 MS.gene94056:CDS 40.0%
ATTGGGGTGCAATGACAATT+CGG - chr8.4:56269334-56269353 MS.gene94056:CDS 40.0%
CAAGCCTAGGATTGAACATT+TGG + chr8.4:56271807-56271826 None:intergenic 40.0%
CATGAAAAGGAGAGGTTTAG+TGG - chr8.4:56267838-56267857 MS.gene94056:intron 40.0%
CCATCAATAATCAACGCCAT+AGG + chr8.4:56269926-56269945 None:intergenic 40.0%
CCTGTGAGATATGGATCAAA+GGG - chr8.4:56267232-56267251 MS.gene94056:CDS 40.0%
CTACCAAAAACAGCTAGTTG+AGG + chr8.4:56267490-56267509 None:intergenic 40.0%
CTATGCAGGTTCAATGTCTT+GGG - chr8.4:56269269-56269288 MS.gene94056:intron 40.0%
CTCTCTCGTAAAGAATAGGA+CGG - chr8.4:56270152-56270171 MS.gene94056:intron 40.0%
CTTAGAGACTCAATAGCTTC+CGG + chr8.4:56269668-56269687 None:intergenic 40.0%
CTTATTCTTCTGTGGGTTTG+AGG - chr8.4:56269456-56269475 MS.gene94056:CDS 40.0%
GATGGAAAGAGATTGTCACT+TGG - chr8.4:56267922-56267941 MS.gene94056:intron 40.0%
GCAGCAAGTACTTCTATGAT+TGG - chr8.4:56269545-56269564 MS.gene94056:CDS 40.0%
GGAAAGCCGGTATTAAAGTA+TGG - chr8.4:56269687-56269706 MS.gene94056:CDS 40.0%
GGATTTCTCATGCATCCATT+TGG - chr8.4:56271203-56271222 MS.gene94056:CDS 40.0%
GGTAAACTATAACCGACATG+AGG + chr8.4:56268287-56268306 None:intergenic 40.0%
GTTCCTCTCTTTGCATATTG+GGG - chr8.4:56271082-56271101 MS.gene94056:CDS 40.0%
TACCAGTAACCATGAAGTGA+CGG + chr8.4:56271277-56271296 None:intergenic 40.0%
TATGCAGGTTCAATGTCTTG+GGG - chr8.4:56269270-56269289 MS.gene94056:intron 40.0%
TATGTCAACGCTTGTTCATC+TGG + chr8.4:56268923-56268942 None:intergenic 40.0%
TCAATATTATGGATGGGGAG+TGG - chr8.4:56268245-56268264 MS.gene94056:CDS 40.0%
TCGTCAAAGCTACTAACAAG+CGG - chr8.4:56269755-56269774 MS.gene94056:CDS 40.0%
TCTTAAAAGCCACAGAGCAA+TGG + chr8.4:56270759-56270778 None:intergenic 40.0%
TGACGAGTAGCCAATTGATA+TGG + chr8.4:56269741-56269760 None:intergenic 40.0%
TGATCCAAATGGCTGATGTT+GGG - chr8.4:56270397-56270416 MS.gene94056:CDS 40.0%
TGATCCATATCTCACAGGTT+TGG + chr8.4:56267230-56267249 None:intergenic 40.0%
TGCTGTGAAAGATGCATATG+AGG - chr8.4:56267552-56267571 MS.gene94056:intron 40.0%
TGGATTTCAAGCTACAATGG+AGG - chr8.4:56267897-56267916 MS.gene94056:intron 40.0%
TGTCCGTGTACAAATAAGAG+AGG + chr8.4:56270501-56270520 None:intergenic 40.0%
TGTGTGGAGAAAACTCTGTT+GGG - chr8.4:56271548-56271567 MS.gene94056:CDS 40.0%
TTCAATCCTAGGCTTGAGAA+GGG - chr8.4:56271811-56271830 MS.gene94056:CDS 40.0%
TTCAATTCCTAACTCGTGTG+TGG - chr8.4:56271532-56271551 MS.gene94056:CDS 40.0%
TTTCTCATGCATCCATTTGG+GGG - chr8.4:56271206-56271225 MS.gene94056:CDS 40.0%
TTTGGTCTCAGTGAATGGAA+AGG - chr8.4:56268706-56268725 MS.gene94056:intron 40.0%
! AGTGGATTTGCAAGCAAAGA+TGG - chr8.4:56268785-56268804 MS.gene94056:CDS 40.0%
! ATGTGCTGATAGATCTCAGA+TGG - chr8.4:56269991-56270010 MS.gene94056:CDS 40.0%
! ATTGAGTCTCTAAGGAAAGC+CGG - chr8.4:56269674-56269693 MS.gene94056:CDS 40.0%
! ATTTTGCAATGGGGCAGTTT+CGG - chr8.4:56270466-56270485 MS.gene94056:CDS 40.0%
! CATGTCGGTTATAGTTTACC+AGG - chr8.4:56268287-56268306 MS.gene94056:CDS 40.0%
! CCTTTTCACATTCCTCATGT+CGG - chr8.4:56268272-56268291 MS.gene94056:CDS 40.0%
! CGGTGAAACTTTTCGTCAAA+GGG - chr8.4:56269354-56269373 MS.gene94056:CDS 40.0%
! GAACATTTGGAACATGACCT+AGG + chr8.4:56271794-56271813 None:intergenic 40.0%
! GGTGAAACTTTTCGTCAAAG+GGG - chr8.4:56269355-56269374 MS.gene94056:CDS 40.0%
! TACAGAGTCCTCAGCTTTAT+GGG - chr8.4:56270972-56270991 MS.gene94056:CDS 40.0%
! TCAATGGCATTTTGCCTTTG+AGG - chr8.4:56269523-56269542 MS.gene94056:CDS 40.0%
! TCGGTGAAACTTTTCGTCAA+AGG - chr8.4:56269353-56269372 MS.gene94056:CDS 40.0%
! TCTTATTTGTACACGGACAC+TGG - chr8.4:56270502-56270521 MS.gene94056:CDS 40.0%
! TGGAGTTGTTTCAACTCCTA+TGG - chr8.4:56269907-56269926 MS.gene94056:CDS 40.0%
! TGGCTTCAGATTTTGCAATG+GGG - chr8.4:56270457-56270476 MS.gene94056:CDS 40.0%
!! AATTTGCTGGGAATTCGGTT+CGG - chr8.4:56267359-56267378 MS.gene94056:intron 40.0%
!! CCTATGGCGTTGATTATTGA+TGG - chr8.4:56269923-56269942 MS.gene94056:CDS 40.0%
!! CTACTTTGGGACCTAATTCA+AGG + chr8.4:56269219-56269238 None:intergenic 40.0%
!! GTTTGAGGACGCTTGTTATT+GGG - chr8.4:56269471-56269490 MS.gene94056:CDS 40.0%
!! TAAAGTATGGGTGTTGACTG+GGG - chr8.4:56269700-56269719 MS.gene94056:CDS 40.0%
!! TAGCAAGTATTGGGGATCTT+TGG - chr8.4:56271119-56271138 MS.gene94056:CDS 40.0%
!! TCAACTAGGGAAGTCACTTT+TGG - chr8.4:56267193-56267212 MS.gene94056:CDS 40.0%
!!! CAACTAGCTGTTTTTGGTAG+AGG - chr8.4:56267490-56267509 MS.gene94056:intron 40.0%
!!! TCTGTGGCTTTTAAGATGCA+TGG - chr8.4:56270763-56270782 MS.gene94056:CDS 40.0%
!!! TTGCAGGGCTATTTTTGATG+TGG - chr8.4:56271945-56271964 MS.gene94056:CDS 40.0%
AAAAAACGTAGCTGCGTCTG+AGG - chr8.4:56269856-56269875 MS.gene94056:CDS 45.0%
ACTTGGCCATGGATGTAATC+AGG - chr8.4:56271173-56271192 MS.gene94056:CDS 45.0%
AGAAAACTCTGTTGGGGTGA+GGG - chr8.4:56271555-56271574 MS.gene94056:CDS 45.0%
AGAGCTGGAATCAACAGCAT+TGG + chr8.4:56270062-56270081 None:intergenic 45.0%
AGATACCATACCATCTCCGA+TGG + chr8.4:56270193-56270212 None:intergenic 45.0%
AGCAGTGAAGAGAACATACC+TGG + chr8.4:56270834-56270853 None:intergenic 45.0%
AGGATATCGGGATCATAACC+TGG + chr8.4:56268308-56268327 None:intergenic 45.0%
AGTCCACCTGATTACATCCA+TGG + chr8.4:56271182-56271201 None:intergenic 45.0%
AGTTGAAGGAGTTAAGGAGC+TGG + chr8.4:56269188-56269207 None:intergenic 45.0%
ATCCAACAGGTTCCCCTTTA+TGG - chr8.4:56271598-56271617 MS.gene94056:CDS 45.0%
ATCCATAAAGGGGAACCTGT+TGG + chr8.4:56271603-56271622 None:intergenic 45.0%
ATGCTTATAGAGCGAACCTC+AGG - chr8.4:56268965-56268984 MS.gene94056:intron 45.0%
CAACATGTGATAGGTCAGAG+TGG - chr8.4:56271472-56271491 MS.gene94056:CDS 45.0%
CAAGCTACAATGGAGGTTGA+TGG - chr8.4:56267904-56267923 MS.gene94056:intron 45.0%
CACTCTGACCTATCACATGT+TGG + chr8.4:56271474-56271493 None:intergenic 45.0%
CACTCTGACTGAGAACAAGA+TGG - chr8.4:56268488-56268507 MS.gene94056:intron 45.0%
CACTGGAATTACCAACGACT+AGG - chr8.4:56270519-56270538 MS.gene94056:CDS 45.0%
CAGAGTCACCAACATGTGAT+AGG - chr8.4:56271463-56271482 MS.gene94056:CDS 45.0%
CCCTTTGATCCATATCTCAC+AGG + chr8.4:56267235-56267254 None:intergenic 45.0%
CCGACATGAGGAATGTGAAA+AGG + chr8.4:56268275-56268294 None:intergenic 45.0%
CGGAAGCTATTGAGTCTCTA+AGG - chr8.4:56269666-56269685 MS.gene94056:CDS 45.0%
CTACAGAGTCCTCAGCTTTA+TGG - chr8.4:56270971-56270990 MS.gene94056:CDS 45.0%
CTAGGTGGTCCAATAAGACT+AGG + chr8.4:56271776-56271795 None:intergenic 45.0%
CTTCCCCAATATGCAAAGAG+AGG + chr8.4:56271088-56271107 None:intergenic 45.0%
GAGGTTGGCAACTATCTTGA+AGG - chr8.4:56269875-56269894 MS.gene94056:CDS 45.0%
GAGTCCAAACCTGTGAGATA+TGG - chr8.4:56267223-56267242 MS.gene94056:CDS 45.0%
GATCCAAATGGCTGATGTTG+GGG - chr8.4:56270398-56270417 MS.gene94056:CDS 45.0%
GATGCTATACCGTCACTTCA+TGG - chr8.4:56271265-56271284 MS.gene94056:CDS 45.0%
GCTATGCAGGTTCAATGTCT+TGG - chr8.4:56269268-56269287 MS.gene94056:intron 45.0%
GGTCTTGAAGCCAAAGATGA+AGG - chr8.4:56268727-56268746 MS.gene94056:CDS 45.0%
GTGTGGAGAAAACTCTGTTG+GGG - chr8.4:56271549-56271568 MS.gene94056:CDS 45.0%
GTGTGTGGAGAAAACTCTGT+TGG - chr8.4:56271547-56271566 MS.gene94056:CDS 45.0%
GTTCAATCCTAGGCTTGAGA+AGG - chr8.4:56271810-56271829 MS.gene94056:CDS 45.0%
GTTGAAGGAGTTAAGGAGCT+GGG + chr8.4:56269187-56269206 None:intergenic 45.0%
GTTGAGAGTTCCACATTGGA+TGG - chr8.4:56271837-56271856 MS.gene94056:CDS 45.0%
GTTGTGTGTCTTTGTCTACC+AGG - chr8.4:56270813-56270832 MS.gene94056:CDS 45.0%
TAAACTGCAGCAAGGTGTAC+CGG - chr8.4:56269646-56269665 MS.gene94056:CDS 45.0%
TACCGTCACTTCATGGTTAC+TGG - chr8.4:56271272-56271291 MS.gene94056:CDS 45.0%
TATCAGCTTGACTGTAGGGT+CGG + chr8.4:56268882-56268901 None:intergenic 45.0%
TCAAGGGCTAAAGCAGTTGA+AGG + chr8.4:56269202-56269221 None:intergenic 45.0%
TCGGATGTGTCAACAACAAG+AGG + chr8.4:56268863-56268882 None:intergenic 45.0%
TGAACATAAGCAACACCGGT+AGG + chr8.4:56267748-56267767 None:intergenic 45.0%
TGCAATGATAGACCCCCAAA+TGG + chr8.4:56271221-56271240 None:intergenic 45.0%
TGGCAAGCACGACATTATTC+TGG - chr8.4:56271965-56271984 MS.gene94056:CDS 45.0%
TTAAGTGCGAGAAGCCGAAT+AGG - chr8.4:56267866-56267885 MS.gene94056:intron 45.0%
TTACCAACGACTAGGCTACA+TGG - chr8.4:56270527-56270546 MS.gene94056:CDS 45.0%
TTCGTGCAAGTTCAAAGAGC+TGG + chr8.4:56270077-56270096 None:intergenic 45.0%
TTGAAGGAGTTAAGGAGCTG+GGG + chr8.4:56269186-56269205 None:intergenic 45.0%
! AACTTGCTCATTCTCAAGGC+TGG + chr8.4:56268562-56268581 None:intergenic 45.0%
! ACAATCCCAGCCTTTTGCAA+CGG + chr8.4:56270132-56270151 None:intergenic 45.0%
! ACAGAGTCCTCAGCTTTATG+GGG - chr8.4:56270973-56270992 MS.gene94056:CDS 45.0%
! CATTTGGAACATGACCTAGG+TGG + chr8.4:56271791-56271810 None:intergenic 45.0%
! CTCCTTGTGTTTTACAGCGT+TGG + chr8.4:56271324-56271343 None:intergenic 45.0%
! GAAACTTTTCGTCAAAGGGG+CGG - chr8.4:56269358-56269377 MS.gene94056:CDS 45.0%
! GTTTTCTCCACACACGAGTT+AGG + chr8.4:56271542-56271561 None:intergenic 45.0%
! TCTATGGAGCTTGTTCGTGT+TGG - chr8.4:56268336-56268355 MS.gene94056:CDS 45.0%
! TGGATGTAATCAGGTGGACT+TGG - chr8.4:56271182-56271201 MS.gene94056:CDS 45.0%
!! AGAAGTACTTGCTGCCTCAA+AGG + chr8.4:56269540-56269559 None:intergenic 45.0%
!! CTAGTCTTATTGGACCACCT+AGG - chr8.4:56271774-56271793 MS.gene94056:CDS 45.0%
!! GGTTTGAGGACGCTTGTTAT+TGG - chr8.4:56269470-56269489 MS.gene94056:CDS 45.0%
AACCTGTTGGATGCACAAGG+TGG + chr8.4:56271590-56271609 None:intergenic 50.0%
ACCTGTTGGATGCACAAGGT+GGG + chr8.4:56271589-56271608 None:intergenic 50.0%
ATGACTCTAGCCATCGGAGA+TGG - chr8.4:56270180-56270199 MS.gene94056:intron 50.0%
CAAATGGCTGATGTTGGGGT+TGG - chr8.4:56270402-56270421 MS.gene94056:CDS 50.0%
CAACCCCAACATCAGCCATT+TGG + chr8.4:56270404-56270423 None:intergenic 50.0%
CGTCTCACGACCACAATACA+CGG + chr8.4:56268010-56268029 None:intergenic 50.0%
CTTCAGTTTGCGCTGCTGTT+TGG - chr8.4:56268142-56268161 MS.gene94056:CDS 50.0%
GAGAAAACTCTGTTGGGGTG+AGG - chr8.4:56271554-56271573 MS.gene94056:CDS 50.0%
GCGTGTTGAGAGTTCCACAT+TGG - chr8.4:56271833-56271852 MS.gene94056:CDS 50.0%
GGTCAATTTGCACTTGGCCA+TGG - chr8.4:56271162-56271181 MS.gene94056:CDS 50.0%
GTCGTGCAGAAGACGTTTAC+AGG - chr8.4:56269814-56269833 MS.gene94056:CDS 50.0%
TAGCTCCGTTGCAAAAGGCT+GGG - chr8.4:56270124-56270143 MS.gene94056:intron 50.0%
TCAAGACGGCTCCTCTTAGA+CGG + chr8.4:56268060-56268079 None:intergenic 50.0%
TCCGATGGCTAGAGTCATGT+CGG + chr8.4:56270178-56270197 None:intergenic 50.0%
TCGAGTAGCTCCGTTGCAAA+AGG - chr8.4:56270119-56270138 MS.gene94056:intron 50.0%
TCTAGCCATCGGAGATGGTA+TGG - chr8.4:56270185-56270204 MS.gene94056:intron 50.0%
TGGCCATGGATGTAATCAGG+TGG - chr8.4:56271176-56271195 MS.gene94056:CDS 50.0%
! AGGTCAGAGTGGTAACGATC+AGG - chr8.4:56271483-56271502 MS.gene94056:CDS 50.0%
! GCTCTCATTTTGGGCTATGC+AGG - chr8.4:56269255-56269274 MS.gene94056:intron 50.0%
!! GACGCTTGTTATTGGGATGC+GGG - chr8.4:56269478-56269497 MS.gene94056:CDS 50.0%
!! GGACGCTTGTTATTGGGATG+CGG - chr8.4:56269477-56269496 MS.gene94056:CDS 50.0%
!! GTTGGTGTTGCCGTGTATTG+TGG - chr8.4:56267997-56268016 MS.gene94056:intron 50.0%
AAACTCTGTTGGGGTGAGGG+TGG - chr8.4:56271558-56271577 MS.gene94056:CDS 55.0%
AACACGCCCTTCTCAAGCCT+AGG + chr8.4:56271820-56271839 None:intergenic 55.0%
AACTCTGTTGGGGTGAGGGT+GGG - chr8.4:56271559-56271578 MS.gene94056:CDS 55.0%
ACACATGCAAGCGTGCACAC+AGG + chr8.4:56270706-56270725 None:intergenic 55.0%
ACATATGCTGCCGCTGCCTA+TGG - chr8.4:56268938-56268957 MS.gene94056:intron 55.0%
ACCCACCTTGTGCATCCAAC+AGG - chr8.4:56271585-56271604 MS.gene94056:CDS 55.0%
ACTCAGGAGCTCCGTCTAAG+AGG - chr8.4:56268046-56268065 MS.gene94056:CDS 55.0%
CGGTAGCGCCCAATATGCAT+AGG + chr8.4:56269616-56269635 None:intergenic 55.0%
GCACCATGTAGCCTAGTCGT+TGG + chr8.4:56270533-56270552 None:intergenic 55.0%
GCCGACATGACTCTAGCCAT+CGG - chr8.4:56270174-56270193 MS.gene94056:intron 55.0%
GGAGGGTAGGCAAGCTGTAA+TGG - chr8.4:56270437-56270456 MS.gene94056:CDS 55.0%
GGGAACCTGTTGGATGCACA+AGG + chr8.4:56271593-56271612 None:intergenic 55.0%
GTAGCTCCGTTGCAAAAGGC+TGG - chr8.4:56270123-56270142 MS.gene94056:intron 55.0%
GTTGGCATCAGTGGTCAGGA+GGG - chr8.4:56270420-56270439 MS.gene94056:CDS 55.0%
TGGGGCTGGACAAAGACAAG+AGG - chr8.4:56270991-56271010 MS.gene94056:CDS 55.0%
TGTCCAGCCCCATAAAGCTG+AGG + chr8.4:56270983-56271002 None:intergenic 55.0%
TTGTCGGCGAGTGATCCTAC+CGG - chr8.4:56267730-56267749 MS.gene94056:intron 55.0%
! AACGTAGCTGCGTCTGAGGT+TGG - chr8.4:56269860-56269879 MS.gene94056:CDS 55.0%
! AGTCCTCAGCTTTATGGGGC+TGG - chr8.4:56270977-56270996 MS.gene94056:CDS 55.0%
! GATGTTGGGGTTGGCATCAG+TGG - chr8.4:56270411-56270430 MS.gene94056:CDS 55.0%
! GGAGCTTGTTCGTGTTGGTC+AGG - chr8.4:56268341-56268360 MS.gene94056:CDS 55.0%
! TAGGGCTGCTTTGCTTCGCA+AGG - chr8.4:56269568-56269587 MS.gene94056:CDS 55.0%
GCATCAGTGGTCAGGAGGGT+AGG - chr8.4:56270424-56270443 MS.gene94056:CDS 60.0%
GGTTGGCATCAGTGGTCAGG+AGG - chr8.4:56270419-56270438 MS.gene94056:CDS 60.0%
! TGGGGTTGGCATCAGTGGTC+AGG - chr8.4:56270416-56270435 MS.gene94056:CDS 60.0%
!! GCTGGGAATTCGGTTCGGAC+CGG - chr8.4:56267364-56267383 MS.gene94056:intron 60.0%
TCTGTTGGGGTGAGGGTGGG+AGG - chr8.4:56271562-56271581 MS.gene94056:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 56267154 56272167 56267154 ID=MS.gene94056
chr8.4 mRNA 56267154 56272167 56267154 ID=MS.gene94056.t1;Parent=MS.gene94056
chr8.4 exon 56270724 56272167 56270724 ID=MS.gene94056.t1.exon1;Parent=MS.gene94056.t1
chr8.4 CDS 56270724 56272167 56270724 ID=cds.MS.gene94056.t1;Parent=MS.gene94056.t1
chr8.4 exon 56270298 56270604 56270298 ID=MS.gene94056.t1.exon2;Parent=MS.gene94056.t1
chr8.4 CDS 56270298 56270604 56270298 ID=cds.MS.gene94056.t1;Parent=MS.gene94056.t1
chr8.4 exon 56269333 56270044 56269333 ID=MS.gene94056.t1.exon3;Parent=MS.gene94056.t1
chr8.4 CDS 56269333 56270044 56269333 ID=cds.MS.gene94056.t1;Parent=MS.gene94056.t1
chr8.4 exon 56269120 56269243 56269120 ID=MS.gene94056.t1.exon4;Parent=MS.gene94056.t1
chr8.4 CDS 56269120 56269243 56269120 ID=cds.MS.gene94056.t1;Parent=MS.gene94056.t1
chr8.4 exon 56268723 56268942 56268723 ID=MS.gene94056.t1.exon5;Parent=MS.gene94056.t1
chr8.4 CDS 56268723 56268942 56268723 ID=cds.MS.gene94056.t1;Parent=MS.gene94056.t1
chr8.4 exon 56268028 56268486 56268028 ID=MS.gene94056.t1.exon6;Parent=MS.gene94056.t1
chr8.4 CDS 56268028 56268486 56268028 ID=cds.MS.gene94056.t1;Parent=MS.gene94056.t1
chr8.4 exon 56267154 56267370 56267154 ID=MS.gene94056.t1.exon7;Parent=MS.gene94056.t1
chr8.4 CDS 56267154 56267370 56267154 ID=cds.MS.gene94056.t1;Parent=MS.gene94056.t1
Gene Sequence

>MS.gene94056

ATGCATAATTCATCATCAAGAAGAAGTTCTGGTAGAAATTCAACTAGGGAAGTCACTTTTGGTCACTCTGAGTCCAAACCTGTGAGATATGGATCAAAGGGTGTTGCTGATTCTGAAGCATTCAGCATGTCTCAGAAAGAAATCAGTGATGAAGATGCTAGGTTGATTTATGTTGATGATCCTGATAGAACAAATGAGAGATTTGAATTTGCTGGGAATTCGGTTCGGACCGGAAAATACTCTTTTATAACTTTTCTTCCTAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATATTTATTTCCTTATAATTGCTATACTTAATCAGTTACCTCAACTAGCTGTTTTTGGTAGAGGTGTATCAATTTTGCCATTGGCTTTTGTTCTTCTTGTTACTGCTGTGAAAGATGCATATGAGGATTGGAGGAGACATAGATCAGATAAAGTTGAGAACAATAGGTTAGGATTGGTTTTGGTTAATGGTCATTTCATTGAGAAGAAATGGAAAGATATTAGAGTTGGCGAGATCATTAAAATCAATGCAAATGAACCGATTCCGTGTGATTTTGTTTTGTTGTCGGCGAGTGATCCTACCGGTGTTGCTTATGTTCAAACTCTTAATCTAGATGGTGAGTCTAATTTGAAGACTAGGTATGCAAAACAAGAGACTCAATTTAAGTTTCATGAAAAGGAGAGGTTTAGTGGTTTGATTAAGTGCGAGAAGCCGAATAGGAATATATATGGATTTCAAGCTACAATGGAGGTTGATGGAAAGAGATTGTCACTTGGTTCCTCGAATATTGTACTTAGAGGATGTGAACTTAAGAATACTAATTGTGTGGTTGGTGTTGCCGTGTATTGTGGTCGTGAGACGAAAGCTATGCTCAACAACTCAGGAGCTCCGTCTAAGAGGAGCCGTCTTGAGACACAAATGAACTCTGAGATCATCATGCTTTCGTTCTTTCTTGTAGTTTTGTGTTCAGTTACTTCAGTTTGCGCTGCTGTTTGGTTAAAGCGAAACAAGAATGAATTGAATCGATTACCTTATTATAGGAAATTGGATTTTTCAAAGGGAAAAGAGGTAAGTTATCAATATTATGGATGGGGAGTGGAAATCCTTTTCACATTCCTCATGTCGGTTATAGTTTACCAGGTTATGATCCCGATATCCTTGTACATTTCTATGGAGCTTGTTCGTGTTGGTCAGGCCTACTTCATGATCAAAGATTCTAGATTGTATGATGAGGCAACAAATTCAAGGTTTCAGTGTAGGGCCTTGAATATCAATGAAGATTTAGGGCAAATTAAATATGTCTTTTCGGACAAAACTGGCACTCTGACTGAGAACAAGATGGAGTTTCAATGCGCTAGTATTTGGGGTGTCGATTACAGTTCTGCAAAAGCCAGCCTTGAGAATGAGCAAGTTGAATACTCTCTTCAAGGTGCAATTTCTTCGTCAAATATGCTTGTCTGTTGTTCTAACATACTTTTAGCTTTAAGTTTATTGCATTTGTTCTTTTTTACTTCGCATGTTTATTTTTGTGTTGTTATTTGGTCTCAGTGAATGGAAAGGTCTTGAAGCCAAAGATGAAGGTGAAAGTTAATCAAGAGCTTATGCAATTAGCAAAAAGTGGATTTGCAAGCAAAGATGGAAAACGGATATACGATTTCTTTCTTGCACTGGCAGCATGCAATACTATTGTGCCTCTTGTTGTTGACACATCCGACCCTACAGTCAAGCTGATAGATTATCAAGGGGAATCACCAGATGAACAAGCGTTGACATATGCTGCCGCTGCCTATGGTTTTATGCTTATAGAGCGAACCTCAGGTCACATAATGATTGATATTCATGGAGAACAACAAAGGTAAATTAATTTTTTTAATAAATTACTTTTTGCTTCTTTTTCTTCCCCAAACAGACATTTTTATGTTGAAAATTGACAATTTAGAATGATTTGCTGTTAATGGTTTTGTATTAATGATGTTTAAGCAGTTTATAAGAGTATTTGCAAATATTATTTGAACCCCAGCTCCTTAACTCCTTCAACTGCTTTAGCCCTTGAATTAGGTCCCAAAGTAGTCCTTTTTTTATGAATGCTCTCATTTTGGGCTATGCAGGTTCAATGTCTTGGGGTTGCATGAATTTGATAGTGATCGGAAAAGAATGTCTGTTATATTGGGGTGCAATGACAATTCGGTGAAACTTTTCGTCAAAGGGGCGGATACATCAATGTTCAGTGTGATCAATAAATCATTGAATACAGACATAATACAGGATACTGAAACCCATCTTCACTCTTATTCTTCTGTGGGTTTGAGGACGCTTGTTATTGGGATGCGGGACTTAAATGCTTCAGAATTTGATCAATGGCATTTTGCCTTTGAGGCAGCAAGTACTTCTATGATTGGTAGGGCTGCTTTGCTTCGCAAGGTTGCTGCAAATGTAGAAAATAACCTATGCATATTGGGCGCTACCGCTATTGAAGATAAACTGCAGCAAGGTGTACCGGAAGCTATTGAGTCTCTAAGGAAAGCCGGTATTAAAGTATGGGTGTTGACTGGGGACAAACAAGAAACTGCCATATCAATTGGCTACTCGTCAAAGCTACTAACAAGCGGCATGACTCAATTTAGAATTAAGAGCAATAATCGAGAGTCGTGCAGAAGACGTTTACAGGATGCACTTCTCATGTCTAGAAAAAACGTAGCTGCGTCTGAGGTTGGCAACTATCTTGAAGGAAGTTCTGATGGAGTTGTTTCAACTCCTATGGCGTTGATTATTGATGGTACCAGCCTTGTATATATTCTTGATAGTGAACTTGAAGAAGAGGTATGTGCTGATAGATCTCAGATGGTGTTTACAATGCATTTCATGCTTATTTCTTATGTGCTGACTTTGACCAATGCTGTTGATTCCAGCTCTTTGAACTTGCACGAAGATGTTCCGTTGTTCTTTGTTGTCGAGTAGCTCCGTTGCAAAAGGCTGGGATTGTCTCTCTCGTAAAGAATAGGACGGCCGACATGACTCTAGCCATCGGAGATGGTATGGTATCTTCATTTTACTTGTTTCAGATTATCATTTCCCTTCAAATAATGAGAACGAAATACAAGGATAGAGAAAATGGAAAAGAAATAAAAGGCATCGGTTAAAAACAAAGATAAAAAATTCTATACATGATTTATTTTTGTGTAAATGATCTTTCTCCTTCATATGTTATAGGTGCTAACGATGTATCAATGATCCAAATGGCTGATGTTGGGGTTGGCATCAGTGGTCAGGAGGGTAGGCAAGCTGTAATGGCTTCAGATTTTGCAATGGGGCAGTTTCGGTTTTTAGTTCCTCTCTTATTTGTACACGGACACTGGAATTACCAACGACTAGGCTACATGGTGCTATACAATTTTTACAGAAATGCTGTCTTTGTGCTAATTCTGTTTTGGTAAGTTAAAATTCAGCTTATGTTTATATGTAGATGTTGTCATCATTCAGTTTGTCATTGAGTATGCTACAAACATCAATTTAACCAATTTATTTCTATATGTGCCTGTGTGCACGCTTGCATGTGTGTGTTAGCATCACTTGTGCAAAAACTATGACCATTGCTCTGTGGCTTTTAAGATGCATGGTTTCAAATTTCGATATCTTACTATATTGTTGTGTGTCTTTGTCTACCAGGTATGTTCTCTTCACTGCTTTCACTTTGACAACAGCTATAAATGAATGGAGCAGCATGTTGTATTCAATAATCTACACTGCAGTGCCAACTATTGTTGTTGCCATTTTTGACAAGGATCTTAGTAAAAGGACTCTTCTACAGAGTCCTCAGCTTTATGGGGCTGGACAAAGACAAGAGGCCTACAACAAAAAATTGTTTTGGTTGACAATAGCTGATACGTTATGGCAAAGCATTGTTGTCTTTTTTGTTCCTCTCTTTGCATATTGGGGAAGCACTGTAGATATAGCAAGTATTGGGGATCTTTGGACTATTTCGATAGTTATTTTGGTCAATTTGCACTTGGCCATGGATGTAATCAGGTGGACTTGGATTTCTCATGCATCCATTTGGGGGTCTATCATTGCAACTTTCATATGTGTCATGGTTGTTGATGCTATACCGTCACTTCATGGTTACTGGTACGTTCTATCTTTATGCAAATGAATCCAACGCTGTAAAACACAAGGAGATGACATGTTTATTTTTAAAACATTGCCAATTAGTCATGTCATGTCATGCATGCATGTGAATATGTTTATTTTTATAGTCATTATAAAATAAGTCATTTTATTATGTTTTAAAATGGCTCAGAGTCACCAACATGTGATAGGTCAGAGTGGTAACGATCAGGCAGCTTAAGCAAGTAGTCATCAATGTTTCAATTCCTAACTCGTGTGTGGAGAAAACTCTGTTGGGGTGAGGGTGGGAGGACCCACCTTGTGCATCCAACAGGTTCCCCTTTATGGATTGCAAAATCAATCCTCTTAAATAAGTCTACGTTGGATAGTGGTATACTCTGAATTCGAGTTATAAGTCGAGAAAAATCCTTATCTTACAAGTCAACTTTGTAGGGTTGAGTTAGACTCAACTCAAATTCTAAGATGATATTTGTTTCTATCCTAGTCTTATTGGACCACCTAGGTCATGTTCCAAATGTTCAATCCTAGGCTTGAGAAGGGCGTGTTGAGAGTTCCACATTGGATGGCTTAAATAGTTTTTATATGCGAGAATTTCTACATTATTTTGTAATCGTGTAACATAAAATCTGACTATTACATGTGTACAAAACTTTGCAGGGCTATTTTTGATGTGGCAAGCACGACATTATTCTGGTTATGTTTGCTAGGAATACTGATAGCAGCATTGCTTCCACGTTTTGTTGTAAAGTTTATTTATCAATATTATTGTCCCGACGATATTCAGATTTCAAGAGAAATCGAGAAGTTTGAGAATAGAAGGGTCAATGGAGATAGACAGATAGAAATGCTTCACATCTCAAATCCACAAAGATAA

Protein sequence

>MS.gene94056.t1

MHNSSSRRSSGRNSTREVTFGHSESKPVRYGSKGVADSEAFSMSQKEISDEDARLIYVDDPDRTNERFEFAGNSVRTGKYSFITFLPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAYEDWRRHRSDKVENNRLGLVLVNGHFIEKKWKDIRVGEIIKINANEPIPCDFVLLSASDPTGVAYVQTLNLDGESNLKTRYAKQETQFKFHEKERFSGLIKCEKPNRNIYGFQATMEVDGKRLSLGSSNIVLRGCELKNTNCVVGVAVYCGRETKAMLNNSGAPSKRSRLETQMNSEIIMLSFFLVVLCSVTSVCAAVWLKRNKNELNRLPYYRKLDFSKGKEVSYQYYGWGVEILFTFLMSVIVYQVMIPISLYISMELVRVGQAYFMIKDSRLYDEATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSAKASLENEQVEYSLQVNGKVLKPKMKVKVNQELMQLAKSGFASKDGKRIYDFFLALAACNTIVPLVVDTSDPTVKLIDYQGESPDEQALTYAAAAYGFMLIERTSGHIMIDIHGEQQRFNVLGLHEFDSDRKRMSVILGCNDNSVKLFVKGADTSMFSVINKSLNTDIIQDTETHLHSYSSVGLRTLVIGMRDLNASEFDQWHFAFEAASTSMIGRAALLRKVAANVENNLCILGATAIEDKLQQGVPEAIESLRKAGIKVWVLTGDKQETAISIGYSSKLLTSGMTQFRIKSNNRESCRRRLQDALLMSRKNVAASEVGNYLEGSSDGVVSTPMALIIDGTSLVYILDSELEEELFELARRCSVVLCCRVAPLQKAGIVSLVKNRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLFVHGHWNYQRLGYMVLYNFYRNAVFVLILFWYVLFTAFTLTTAINEWSSMLYSIIYTAVPTIVVAIFDKDLSKRTLLQSPQLYGAGQRQEAYNKKLFWLTIADTLWQSIVVFFVPLFAYWGSTVDIASIGDLWTISIVILVNLHLAMDVIRWTWISHASIWGSIIATFICVMVVDAIPSLHGYWAIFDVASTTLFWLCLLGILIAALLPRFVVKFIYQYYCPDDIQISREIEKFENRRVNGDRQIEMLHISNPQR