Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94992.t1 | XP_013467164.1 | 98 | 650 | 13 | 0 | 1 | 650 | 1 | 650 | 0.00E+00 | 1240.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94992.t1 | Q86YJ7 | 32.1 | 262 | 169 | 5 | 52 | 308 | 31 | 288 | 1.7e-29 | 132.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94992.t1 | A0A072VSU6 | 98.0 | 650 | 13 | 0 | 1 | 650 | 1 | 650 | 0.0e+00 | 1240.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene94992 | 0.808684 | 2.74E-50 | -1.69E-46 |
| MS.gene04917 | MS.gene94992 | 0.808946 | 2.41E-50 | -1.69E-46 |
| MS.gene049674 | MS.gene94992 | 0.820599 | 6.30E-53 | -1.69E-46 |
| MS.gene049861 | MS.gene94992 | 0.834211 | 3.42E-56 | -1.69E-46 |
| MS.gene04991 | MS.gene94992 | -0.801665 | 8.09E-49 | -1.69E-46 |
| MS.gene050085 | MS.gene94992 | 0.811225 | 7.79E-51 | -1.69E-46 |
| MS.gene050114 | MS.gene94992 | 0.814841 | 1.25E-51 | -1.69E-46 |
| MS.gene050288 | MS.gene94992 | 0.80476 | 1.85E-49 | -1.69E-46 |
| MS.gene050317 | MS.gene94992 | 0.828314 | 9.63E-55 | -1.69E-46 |
| MS.gene050320 | MS.gene94992 | 0.824217 | 9.09E-54 | -1.69E-46 |
| MS.gene050359 | MS.gene94992 | 0.80879 | 2.60E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene94992 | 0.804842 | 1.78E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene94992 | 0.815067 | 1.12E-51 | -1.69E-46 |
| MS.gene050752 | MS.gene94992 | 0.800737 | 1.25E-48 | -1.69E-46 |
| MS.gene050838 | MS.gene94992 | 0.809359 | 1.97E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene94992 | 0.810891 | 9.20E-51 | -1.69E-46 |
| MS.gene051184 | MS.gene94992 | 0.862872 | 3.72E-64 | -1.69E-46 |
| MS.gene051748 | MS.gene94992 | 0.825791 | 3.87E-54 | -1.69E-46 |
| MS.gene051756 | MS.gene94992 | 0.805705 | 1.17E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene94992 | 0.807784 | 4.27E-50 | -1.69E-46 |
| MS.gene051987 | MS.gene94992 | 0.82527 | 5.14E-54 | -1.69E-46 |
| MS.gene052342 | MS.gene94992 | 0.810954 | 8.92E-51 | -1.69E-46 |
| MS.gene052434 | MS.gene94992 | 0.854492 | 1.19E-61 | -1.69E-46 |
| MS.gene052527 | MS.gene94992 | 0.807927 | 3.98E-50 | -1.69E-46 |
| MS.gene052932 | MS.gene94992 | 0.810447 | 1.15E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene94992 | 0.856595 | 2.89E-62 | -1.69E-46 |
| MS.gene053109 | MS.gene94992 | 0.821606 | 3.69E-53 | -1.69E-46 |
| MS.gene053298 | MS.gene94992 | 0.803031 | 4.23E-49 | -1.69E-46 |
| MS.gene053381 | MS.gene94992 | 0.808288 | 3.33E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene94992 | -0.840677 | 7.53E-58 | -1.69E-46 |
| MS.gene053456 | MS.gene94992 | 0.803446 | 3.47E-49 | -1.69E-46 |
| MS.gene053564 | MS.gene94992 | 0.815607 | 8.48E-52 | -1.69E-46 |
| MS.gene053726 | MS.gene94992 | 0.80298 | 4.34E-49 | -1.69E-46 |
| MS.gene053879 | MS.gene94992 | 0.852017 | 6.08E-61 | -1.69E-46 |
| MS.gene05469 | MS.gene94992 | 0.835612 | 1.52E-56 | -1.69E-46 |
| MS.gene054893 | MS.gene94992 | 0.801652 | 8.14E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene94992 | 0.821385 | 4.15E-53 | -1.69E-46 |
| MS.gene055314 | MS.gene94992 | 0.810055 | 1.39E-50 | -1.69E-46 |
| MS.gene055864 | MS.gene94992 | 0.802969 | 4.36E-49 | -1.69E-46 |
| MS.gene056097 | MS.gene94992 | 0.810256 | 1.26E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene94992 | 0.806109 | 9.65E-50 | -1.69E-46 |
| MS.gene056403 | MS.gene94992 | 0.802179 | 6.34E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene94992 | 0.816484 | 5.40E-52 | -1.69E-46 |
| MS.gene056849 | MS.gene94992 | 0.810588 | 1.07E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene94992 | 0.828794 | 7.37E-55 | -1.69E-46 |
| MS.gene056992 | MS.gene94992 | 0.827428 | 1.57E-54 | -1.69E-46 |
| MS.gene057234 | MS.gene94992 | 0.80582 | 1.11E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene94992 | 0.868506 | 6.21E-66 | -1.69E-46 |
| MS.gene058054 | MS.gene94992 | 0.800433 | 1.44E-48 | -1.69E-46 |
| MS.gene058074 | MS.gene94992 | 0.809234 | 2.09E-50 | -1.69E-46 |
| MS.gene058278 | MS.gene94992 | 0.81465 | 1.38E-51 | -1.69E-46 |
| MS.gene058758 | MS.gene94992 | 0.833858 | 4.19E-56 | -1.69E-46 |
| MS.gene059146 | MS.gene94992 | 0.801951 | 7.07E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene94992 | 0.826824 | 2.19E-54 | -1.69E-46 |
| MS.gene059590 | MS.gene94992 | 0.806677 | 7.32E-50 | -1.69E-46 |
| MS.gene06010 | MS.gene94992 | 0.839971 | 1.15E-57 | -1.69E-46 |
| MS.gene06011 | MS.gene94992 | 0.83656 | 8.71E-57 | -1.69E-46 |
| MS.gene060702 | MS.gene94992 | 0.827151 | 1.83E-54 | -1.69E-46 |
| MS.gene060763 | MS.gene94992 | 0.807121 | 5.90E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene94992 | 0.803523 | 3.35E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94992.t1 | MTR_1g046580 | 98.000 | 650 | 13 | 0 | 1 | 650 | 1 | 650 | 0.0 | 1309 |
| MS.gene94992.t1 | MTR_7g115580 | 56.006 | 641 | 247 | 12 | 5 | 631 | 29 | 648 | 0.0 | 677 |
| MS.gene94992.t1 | MTR_1g080310 | 53.292 | 638 | 250 | 11 | 5 | 636 | 3 | 598 | 0.0 | 627 |
| MS.gene94992.t1 | MTR_2g023450 | 43.106 | 631 | 259 | 10 | 8 | 626 | 19 | 561 | 2.66e-163 | 481 |
| MS.gene94992.t1 | MTR_1g046930 | 61.671 | 347 | 131 | 2 | 1 | 346 | 1 | 346 | 1.14e-145 | 435 |
| MS.gene94992.t1 | MTR_1g046930 | 57.386 | 176 | 65 | 3 | 474 | 647 | 401 | 568 | 5.83e-50 | 183 |
| MS.gene94992.t1 | MTR_1g115930 | 57.407 | 54 | 23 | 0 | 56 | 109 | 33 | 86 | 9.87e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94992.t1 | AT1G04780 | 70.977 | 665 | 166 | 13 | 4 | 649 | 6 | 662 | 0.0 | 889 |
| MS.gene94992.t1 | AT3G24210 | 62.124 | 631 | 197 | 10 | 1 | 630 | 1 | 590 | 0.0 | 744 |
| MS.gene94992.t1 | AT3G04470 | 52.977 | 655 | 225 | 12 | 5 | 631 | 3 | 602 | 0.0 | 660 |
| MS.gene94992.t1 | AT1G62050 | 43.451 | 649 | 270 | 14 | 9 | 627 | 18 | 599 | 4.61e-163 | 481 |
| MS.gene94992.t1 | AT1G11740 | 52.318 | 302 | 141 | 1 | 9 | 310 | 17 | 315 | 2.64e-105 | 333 |
| MS.gene94992.t1 | AT1G11740 | 47.953 | 171 | 61 | 4 | 479 | 628 | 364 | 527 | 2.37e-37 | 148 |
Find 149 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCACTTGGCTGTTAAATT+AGG | 0.055054 | 1.1:-29482919 | MS.gene94992:CDS |
| TTCACTTGGCTGTTAAATTA+GGG | 0.214370 | 1.1:-29482918 | MS.gene94992:CDS |
| CTTCAGACACTTACAAGATT+TGG | 0.232931 | 1.1:-29482624 | MS.gene94992:CDS |
| TGAAAAGGTGAGCGATTTAT+TGG | 0.236609 | 1.1:-29481873 | MS.gene94992:CDS |
| GGAAAAGGGGTGCGAATCTA+AGG | 0.266382 | 1.1:-29482603 | MS.gene94992:CDS |
| TGTCTAAAACAAATATATTT+AGG | 0.297109 | 1.1:-29482372 | MS.gene94992:CDS |
| CAATTCCACCAGATTATACT+TGG | 0.314172 | 1.1:-29478450 | MS.gene94992:CDS |
| AAGGATTGAGGCCTATTCTT+TGG | 0.316054 | 1.1:-29481685 | MS.gene94992:CDS |
| AGCCTCTTGCTTGGGCAAAA+TGG | 0.326240 | 1.1:-29482759 | MS.gene94992:CDS |
| ATCTTGGTTTCAGTGGATAA+AGG | 0.328101 | 1.1:-29478545 | MS.gene94992:CDS |
| GAGCAAGCACTGACCTTAAC+AGG | 0.333513 | 1.1:+29481536 | None:intergenic |
| CAATTGCCTTCTTTCATCTT+CGG | 0.347048 | 1.1:+29482126 | None:intergenic |
| GGGATCGATGTTGCAAAGTT+TGG | 0.347521 | 1.1:-29483132 | MS.gene94992:CDS |
| CTGTGATACCTTTCATTTCA+AGG | 0.359358 | 1.1:-29482654 | MS.gene94992:CDS |
| GCTGAAATGCTTATGGTTGT+TGG | 0.381013 | 1.1:-29482883 | MS.gene94992:CDS |
| AGAATTTACAGAAGAAGCTT+TGG | 0.383345 | 1.1:+29481760 | None:intergenic |
| TCTACGCAAAGAGAACTTCT+TGG | 0.388331 | 1.1:+29481896 | None:intergenic |
| CAATCTCTGCTGTGATTGAT+AGG | 0.391403 | 1.1:-29482969 | MS.gene94992:CDS |
| CTACCGTTACCATCTTCAAT+AGG | 0.394559 | 1.1:+29482016 | None:intergenic |
| GAAAAGGTGAGCGATTTATT+GGG | 0.399396 | 1.1:-29481872 | MS.gene94992:CDS |
| GCATTATCAGCCTCTTGCTT+GGG | 0.401369 | 1.1:-29482767 | MS.gene94992:CDS |
| GGTGGAATTGCAAACGGGTC+TGG | 0.404701 | 1.1:+29478463 | None:intergenic |
| CAAATTTCTCTGCTTCATCT+TGG | 0.407176 | 1.1:-29478561 | MS.gene94992:CDS |
| ATAAAATCTAGAGGAGTTCC+TGG | 0.407650 | 1.1:-29482226 | MS.gene94992:CDS |
| AGGATTATGGTGAGCTTAAG+AGG | 0.411282 | 1.1:-29483077 | MS.gene94992:CDS |
| CACTTACAAGATTTGGAAAA+GGG | 0.421955 | 1.1:-29482617 | MS.gene94992:CDS |
| AGGGCTGACATGACTTTGGC+TGG | 0.422895 | 1.1:-29482583 | MS.gene94992:CDS |
| TTATGGTTGTTGGTGCTGAT+TGG | 0.422928 | 1.1:-29482873 | MS.gene94992:CDS |
| TTCTCTTTGCGTAGATGAAA+AGG | 0.429956 | 1.1:-29481888 | MS.gene94992:CDS |
| GTGTAGAAGGTTGCCTCGTT+TGG | 0.430443 | 1.1:-29482737 | MS.gene94992:CDS |
| AAACAGAAATGGTAGGATCT+TGG | 0.430531 | 1.1:-29482288 | MS.gene94992:CDS |
| GGTGAGCTTAAGAGGATACT+TGG | 0.431434 | 1.1:-29483069 | MS.gene94992:CDS |
| CTTGGTGATGGTTCAGAGGA+TGG | 0.433039 | 1.1:-29482514 | MS.gene94992:CDS |
| CTGCTTCATCTTGGTTTCAG+TGG | 0.434475 | 1.1:-29478552 | MS.gene94992:CDS |
| TTGTGCTGTTTAGGTATGGC+AGG | 0.436450 | 1.1:-29483153 | None:intergenic |
| GCAGAGAAATTTGTCGCTGC+AGG | 0.438127 | 1.1:+29478571 | None:intergenic |
| AGCGGCTGCTGAAATGCTTA+TGG | 0.441584 | 1.1:-29482890 | MS.gene94992:CDS |
| CGAAGATGAAAGAAGGCAAT+TGG | 0.443916 | 1.1:-29482125 | MS.gene94992:CDS |
| AGCATTATCAGCCTCTTGCT+TGG | 0.448609 | 1.1:-29482768 | MS.gene94992:CDS |
| CTTGGGCAAAATGGTGTAGA+AGG | 0.452313 | 1.1:-29482750 | MS.gene94992:CDS |
| TGGTCATAGTCCTGTGCATA+AGG | 0.452951 | 1.1:-29483112 | MS.gene94992:CDS |
| ACACTTACAAGATTTGGAAA+AGG | 0.454221 | 1.1:-29482618 | MS.gene94992:CDS |
| GGTTTAATCTGATTATTTGA+AGG | 0.456077 | 1.1:+29481842 | None:intergenic |
| AGAGACATTCCTATTGAAGA+TGG | 0.456127 | 1.1:-29482025 | MS.gene94992:CDS |
| CCTGACATGGATGGACTTGT+CGG | 0.456807 | 1.1:+29478604 | None:intergenic |
| GAGAAGAACAAATCAAAGAA+AGG | 0.457216 | 1.1:-29478394 | MS.gene94992:CDS |
| TCAGTTGACTTGGAGGCGCC+AGG | 0.458205 | 1.1:-29482314 | MS.gene94992:CDS |
| GAAAATAAGCAGGAAAAGAA+AGG | 0.458780 | 1.1:-29481983 | MS.gene94992:CDS |
| ATCGTTAAGTTCTTCACTCT+CGG | 0.461882 | 1.1:+29482156 | None:intergenic |
| TGAGATCATGCAGAGTGATC+CGG | 0.463016 | 1.1:+29482480 | None:intergenic |
| TTTGCAACAATGTCAAGTAA+TGG | 0.466040 | 1.1:+29481623 | None:intergenic |
| AGAAAGGATGGTTTGGTGGA+TGG | 0.466730 | 1.1:-29481967 | MS.gene94992:CDS |
| ATTGGAGGATGCACTTAAGC+TGG | 0.468456 | 1.1:-29482107 | MS.gene94992:CDS |
| GATGGTAACGGTAGCAATAG+TGG | 0.470448 | 1.1:-29482007 | MS.gene94992:CDS |
| CAGGAAAAGAAAGGATGGTT+TGG | 0.470506 | 1.1:-29481974 | MS.gene94992:CDS |
| GAACCTGCAGCAGATGAACT+AGG | 0.474066 | 1.1:+29478511 | None:intergenic |
| ACTTACAACAAAACTTCCAA+TGG | 0.475435 | 1.1:-29481567 | MS.gene94992:CDS |
| AGAAGAACAAATCAAAGAAA+GGG | 0.475808 | 1.1:-29478393 | MS.gene94992:CDS |
| CGCCCTAGTTCATCTGCTGC+AGG | 0.477336 | 1.1:-29478514 | MS.gene94992:CDS |
| TAATCTGGTGGAATTGCAAA+CGG | 0.477515 | 1.1:+29478457 | None:intergenic |
| ACTCTGATGGTGGGAACCAC+AGG | 0.479198 | 1.1:+29478685 | None:intergenic |
| ATGACTTTGGCTGGTTTCGA+CGG | 0.483089 | 1.1:-29482574 | MS.gene94992:CDS |
| CATGATCTCACACAAGGAAA+AGG | 0.485210 | 1.1:-29482467 | MS.gene94992:CDS |
| CGTGAAAATGAATATAAGAA+AGG | 0.486287 | 1.1:-29481704 | MS.gene94992:CDS |
| ATAGGAATGTCTCTAAAGCT+TGG | 0.492744 | 1.1:+29482034 | None:intergenic |
| CTTACAACAAAACTTCCAAT+GGG | 0.493342 | 1.1:-29481566 | MS.gene94992:CDS |
| CTGCAGGTTCCAGCAGTAGT+AGG | 0.495341 | 1.1:-29478498 | MS.gene94992:CDS |
| CTCTCTTCGCCTGACATGGA+TGG | 0.499410 | 1.1:+29478595 | None:intergenic |
| TTCTGTTGAGGTTGTTGTGA+GGG | 0.502579 | 1.1:-29481810 | MS.gene94992:CDS |
| GCAGTGACCCAAGTATAATC+TGG | 0.510448 | 1.1:+29478442 | None:intergenic |
| TCTAAGGGCTGACATGACTT+TGG | 0.515499 | 1.1:-29482587 | MS.gene94992:CDS |
| CCGACAAGTCCATCCATGTC+AGG | 0.516227 | 1.1:-29478604 | MS.gene94992:CDS |
| TTGGTGATGGTTCAGAGGAT+GGG | 0.516406 | 1.1:-29482513 | MS.gene94992:CDS |
| GGGTGAGATTCGTACGGAAG+CGG | 0.516999 | 1.1:-29483022 | MS.gene94992:CDS |
| GTGAGCTTAAGAGGATACTT+GGG | 0.519970 | 1.1:-29483068 | MS.gene94992:CDS |
| TTTACCTAAGCTGTGTAATG+TGG | 0.520667 | 1.1:-29483043 | MS.gene94992:CDS |
| GCAGATGAACTAGGGCGGTA+TGG | 0.522475 | 1.1:+29478520 | None:intergenic |
| GGTGTTGCGAATTCATCTAA+TGG | 0.523036 | 1.1:+29478628 | None:intergenic |
| AATCTGGTGGAATTGCAAAC+GGG | 0.523683 | 1.1:+29478458 | None:intergenic |
| TGAAGAGGAGTATCGCGATT+CGG | 0.526239 | 1.1:+29482937 | None:intergenic |
| GCCTGGTATTGATGTTACTC+AGG | 0.530031 | 1.1:-29482350 | MS.gene94992:CDS |
| CTGAACAATGATAGTGATGA+GGG | 0.531253 | 1.1:-29482073 | MS.gene94992:CDS |
| TCATCGTCTGTCATAGCTCC+AGG | 0.531703 | 1.1:+29482208 | None:intergenic |
| AAAACAAATATATTTAGGCC+TGG | 0.531734 | 1.1:-29482367 | MS.gene94992:CDS |
| TCATGCAGAGTGATCCGGGC+TGG | 0.533564 | 1.1:+29482485 | None:intergenic |
| TTTGGCGAAAGCCAAAGAAT+AGG | 0.538222 | 1.1:+29481674 | None:intergenic |
| AGCAGAAGTCGTCATAAAGA+TGG | 0.538908 | 1.1:-29481731 | MS.gene94992:CDS |
| ACCTCAACAGAATGTCTCCC+TGG | 0.545970 | 1.1:+29481821 | None:intergenic |
| TTAACAGGAAAAGTTCCCAT+TGG | 0.546615 | 1.1:+29481551 | None:intergenic |
| AGGGCTCTCTTCGCCTGACA+TGG | 0.547387 | 1.1:+29478591 | None:intergenic |
| GAGATCATGCAGAGTGATCC+GGG | 0.550659 | 1.1:+29482481 | None:intergenic |
| GCGCCAGGAGAAAACAGAAA+TGG | 0.553288 | 1.1:-29482299 | MS.gene94992:CDS |
| TGTGCTGTTTAGGTATGGCA+GGG | 0.554264 | 1.1:-29483152 | None:intergenic |
| CAAATCTTGTAAGTGTCTGA+AGG | 0.555543 | 1.1:+29482625 | None:intergenic |
| GGTAGGATCTTGGAAAGCTA+AGG | 0.558300 | 1.1:-29482278 | MS.gene94992:CDS |
| GGTTCCCACCATCAGAGTAT+TGG | 0.560691 | 1.1:-29478680 | MS.gene94992:CDS |
| GAAAAGAAAGGATGGTTTGG+TGG | 0.562638 | 1.1:-29481971 | MS.gene94992:CDS |
| TCGCGATACTCCTCTTCACT+TGG | 0.563493 | 1.1:-29482932 | MS.gene94992:CDS |
| ATAAGCAGGAAAAGAAAGGA+TGG | 0.566965 | 1.1:-29481979 | MS.gene94992:CDS |
| AGATGAAAGAAGGCAATTGG+AGG | 0.568053 | 1.1:-29482122 | MS.gene94992:CDS |
| TTGTGAGGGGCGATGAGCAA+CGG | 0.572804 | 1.1:-29481796 | MS.gene94992:CDS |
| TATTCAGGTTGCCATTCCTG+TGG | 0.573026 | 1.1:-29478701 | MS.gene94992:intron |
| GTTTGGTAGCGACGATGTGG+AGG | 0.573644 | 1.1:-29482720 | MS.gene94992:CDS |
| TCACTTGGCTGTTAAATTAG+GGG | 0.574791 | 1.1:-29482917 | MS.gene94992:CDS |
| TCAAATAATCAGATTAAACC+AGG | 0.576252 | 1.1:-29481839 | MS.gene94992:CDS |
| AGTGACCAATACTCTGATGG+TGG | 0.577816 | 1.1:+29478675 | None:intergenic |
| TCACCCACATTACACAGCTT+AGG | 0.579319 | 1.1:+29483039 | None:intergenic |
| GATGGTGGGAACCACAGGAA+TGG | 0.580921 | 1.1:+29478690 | None:intergenic |
| AAAATCACAGCCTTATGCAC+AGG | 0.583563 | 1.1:+29483102 | None:intergenic |
| TGGAGTTTGCAGAATGAACA+AGG | 0.585411 | 1.1:-29482853 | MS.gene94992:CDS |
| CAATAGTGGAGAAAATAAGC+AGG | 0.586148 | 1.1:-29481993 | MS.gene94992:CDS |
| AACCTGCAGCAGATGAACTA+GGG | 0.586365 | 1.1:+29478512 | None:intergenic |
| GGTGCAATCCTTGAAATGAA+AGG | 0.596454 | 1.1:+29482646 | None:intergenic |
| CAGAGAAATTTGTCGCTGCA+GGG | 0.601633 | 1.1:+29478572 | None:intergenic |
| TCTGTTGAGGTTGTTGTGAG+GGG | 0.602480 | 1.1:-29481809 | MS.gene94992:CDS |
| AATTTAACAGCCAAGTGAAG+AGG | 0.606406 | 1.1:+29482922 | None:intergenic |
| ACGCAAAGAGAACTTCTTGG+TGG | 0.607111 | 1.1:+29481899 | None:intergenic |
| AATTCCACCAGATTATACTT+GGG | 0.608111 | 1.1:-29478449 | MS.gene94992:CDS |
| ATTCTGTTGAGGTTGTTGTG+AGG | 0.608833 | 1.1:-29481811 | MS.gene94992:CDS |
| ATGAATATAAGAAAGGATTG+AGG | 0.612683 | 1.1:-29481697 | MS.gene94992:CDS |
| GTTGTAAGTATAAAATCTAG+AGG | 0.612791 | 1.1:-29482235 | MS.gene94992:CDS |
| ACCAGGGAGACATTCTGTTG+AGG | 0.613862 | 1.1:-29481822 | MS.gene94992:CDS |
| GAAAAGGGGTGCGAATCTAA+GGG | 0.614309 | 1.1:-29482602 | MS.gene94992:CDS |
| CACATCGTCGCTACCAAACG+AGG | 0.615764 | 1.1:+29482724 | None:intergenic |
| ACTGAACAATGATAGTGATG+AGG | 0.620972 | 1.1:-29482074 | MS.gene94992:CDS |
| CTCGTTTGGTAGCGACGATG+TGG | 0.623287 | 1.1:-29482723 | MS.gene94992:CDS |
| TTACCTAAGCTGTGTAATGT+GGG | 0.623380 | 1.1:-29483042 | MS.gene94992:CDS |
| GAGGATGGGAAAGTCCAGCC+CGG | 0.628594 | 1.1:-29482499 | MS.gene94992:CDS |
| GTGACCCAAGTATAATCTGG+TGG | 0.630524 | 1.1:+29478445 | None:intergenic |
| GCCTGAGTAACATCAATACC+AGG | 0.632873 | 1.1:+29482349 | None:intergenic |
| GTGACCAATACTCTGATGGT+GGG | 0.634458 | 1.1:+29478676 | None:intergenic |
| CAGGAGAAAACAGAAATGGT+AGG | 0.637085 | 1.1:-29482295 | MS.gene94992:CDS |
| TGTTAAATTAGGGGATGAAG+CGG | 0.639879 | 1.1:-29482908 | MS.gene94992:CDS |
| GTTTGCAGAATGAACAAGGG+TGG | 0.641695 | 1.1:-29482849 | MS.gene94992:CDS |
| TGAGCTTAAGAGGATACTTG+GGG | 0.641820 | 1.1:-29483067 | MS.gene94992:CDS |
| ATTCCTATTGAAGATGGTAA+CGG | 0.643760 | 1.1:-29482019 | MS.gene94992:CDS |
| TGAGGGGCGATGAGCAACGG+AGG | 0.648943 | 1.1:-29481793 | MS.gene94992:CDS |
| ACTTACAAGATTTGGAAAAG+GGG | 0.652824 | 1.1:-29482616 | MS.gene94992:CDS |
| TGGCGCCTCCAAGTCAACTG+AGG | 0.653180 | 1.1:+29482316 | None:intergenic |
| GATCTCACACAAGGAAAAGG+AGG | 0.660308 | 1.1:-29482464 | MS.gene94992:CDS |
| AAAAGTGACCAATACTCTGA+TGG | 0.668899 | 1.1:+29478672 | None:intergenic |
| TAATGTGGGTGAGATTCGTA+CGG | 0.669654 | 1.1:-29483028 | MS.gene94992:CDS |
| CAAATAATCAGATTAAACCA+GGG | 0.677591 | 1.1:-29481838 | MS.gene94992:CDS |
| GACATGGATGGACTTGTCGG+CGG | 0.681897 | 1.1:+29478607 | None:intergenic |
| GGAGTTTGCAGAATGAACAA+GGG | 0.699547 | 1.1:-29482852 | MS.gene94992:CDS |
| GAGCTTAAGAGGATACTTGG+GGG | 0.708775 | 1.1:-29483066 | MS.gene94992:CDS |
| TGAACAATGATAGTGATGAG+GGG | 0.712496 | 1.1:-29482072 | MS.gene94992:CDS |
| CTGCAGCAGATGAACTAGGG+CGG | 0.715429 | 1.1:+29478515 | None:intergenic |
| ACTCTGCATGATCTCACACA+AGG | 0.718060 | 1.1:-29482473 | MS.gene94992:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTGCTTTAAATAAT+TGG | - | chr1.1:29481542-29481561 | MS.gene94992:intron | 10.0% |
| !! | GAATATAATTAATCATGTTT+CGG | - | chr1.1:29480224-29480243 | MS.gene94992:intron | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | + | chr1.1:29480196-29480215 | None:intergenic | 15.0% |
| !!! | TGTCTAAAACAAATATATTT+AGG | - | chr1.1:29479141-29479160 | MS.gene94992:intron | 15.0% |
| !! | AAAAAAAAAAAAAATCCCAC+AGG | + | chr1.1:29480987-29481006 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAAATCCCACA+GGG | + | chr1.1:29480986-29481005 | None:intergenic | 20.0% |
| !! | AAAGGAAATTCCAAAATTAT+AGG | + | chr1.1:29482232-29482251 | None:intergenic | 20.0% |
| !! | AAGGAAATTCCAAAATTATA+GGG | + | chr1.1:29482231-29482250 | None:intergenic | 20.0% |
| !! | AATAATGAAGAACAGTATAA+AGG | + | chr1.1:29482250-29482269 | None:intergenic | 20.0% |
| !! | ATCATCTATAAAGAAAGATA+TGG | + | chr1.1:29482768-29482787 | None:intergenic | 20.0% |
| !! | ATGAACTATAAGTTATAATG+TGG | + | chr1.1:29481775-29481794 | None:intergenic | 20.0% |
| !! | CAAAGATTCTATTAATTATG+TGG | + | chr1.1:29482092-29482111 | None:intergenic | 20.0% |
| !! | CAATACTAAATACAAATGTA+GGG | + | chr1.1:29480785-29480804 | None:intergenic | 20.0% |
| !! | TATAAAATAGATATACTCCA+GGG | - | chr1.1:29481290-29481309 | MS.gene94992:intron | 20.0% |
| !! | TCATCTATAAAGAAAGATAT+GGG | + | chr1.1:29482767-29482786 | None:intergenic | 20.0% |
| !! | TTATAAAATAGATATACTCC+AGG | - | chr1.1:29481289-29481308 | MS.gene94992:intron | 20.0% |
| !! | TTCTATCCAATCATAATTAA+TGG | + | chr1.1:29480828-29480847 | None:intergenic | 20.0% |
| !!! | AAGAGTTCTTCAATTTTTAA+TGG | + | chr1.1:29479869-29479888 | None:intergenic | 20.0% |
| !!! | ACTAACAATATGAATTTTCT+GGG | - | chr1.1:29480024-29480043 | MS.gene94992:intron | 20.0% |
| !!! | AGATTTAATCCCTATAATTT+TGG | - | chr1.1:29482219-29482238 | MS.gene94992:CDS | 20.0% |
| !!! | ATTTTCTCAAATTATTATCG+GGG | + | chr1.1:29480194-29480213 | None:intergenic | 20.0% |
| !!! | CATTTTCTCAAATTATTATC+GGG | + | chr1.1:29480195-29480214 | None:intergenic | 20.0% |
| !!! | GTTTGTTTCTTTTGTATTTT+TGG | - | chr1.1:29481008-29481027 | MS.gene94992:intron | 20.0% |
| !!! | GTTTTTGTAAAAAAAAGTCT+AGG | - | chr1.1:29481842-29481861 | MS.gene94992:CDS | 20.0% |
| !!! | TCAATTTTTAATGGAAAGTT+TGG | + | chr1.1:29479860-29479879 | None:intergenic | 20.0% |
| !!! | TCTAATTAGCTTGAATTTTA+TGG | - | chr1.1:29480688-29480707 | MS.gene94992:intron | 20.0% |
| !!! | TTTTGTATTTTTGGATACAA+GGG | - | chr1.1:29481017-29481036 | MS.gene94992:intron | 20.0% |
| ! | AAAAAAAAAAAATCCCACAG+GGG | + | chr1.1:29480985-29481004 | None:intergenic | 25.0% |
| ! | AAAACAAATATATTTAGGCC+TGG | - | chr1.1:29479146-29479165 | MS.gene94992:intron | 25.0% |
| ! | AAAACGAAATCAAATCACAA+AGG | + | chr1.1:29481936-29481955 | None:intergenic | 25.0% |
| ! | AACAGGATATTATTACACAT+TGG | + | chr1.1:29481616-29481635 | None:intergenic | 25.0% |
| ! | AACAGTGAAAAAACACAAAA+AGG | + | chr1.1:29482735-29482754 | None:intergenic | 25.0% |
| ! | AATATGTAGACTTGAGAATA+AGG | + | chr1.1:29482323-29482342 | None:intergenic | 25.0% |
| ! | ACAAAAATTTCGGTAATAAG+TGG | + | chr1.1:29481161-29481180 | None:intergenic | 25.0% |
| ! | ACAGTGAAAAAACACAAAAA+GGG | + | chr1.1:29482734-29482753 | None:intergenic | 25.0% |
| ! | ACATATCAAGAATGTTTAGA+AGG | + | chr1.1:29482608-29482627 | None:intergenic | 25.0% |
| ! | ACCTATACTTGAGAAATAAA+AGG | + | chr1.1:29481818-29481837 | None:intergenic | 25.0% |
| ! | AGAAGAACAAATCAAAGAAA+GGG | - | chr1.1:29483120-29483139 | MS.gene94992:CDS | 25.0% |
| ! | ATGAATATAAGAAAGGATTG+AGG | - | chr1.1:29479816-29479835 | MS.gene94992:intron | 25.0% |
| ! | ATGTGGTATTAATTGAATAG+AGG | + | chr1.1:29481758-29481777 | None:intergenic | 25.0% |
| ! | CAAAAATTTCGGTAATAAGT+GGG | + | chr1.1:29481160-29481179 | None:intergenic | 25.0% |
| ! | CAAATAATCAGATTAAACCA+GGG | - | chr1.1:29479675-29479694 | MS.gene94992:intron | 25.0% |
| ! | CACTTTCCATTAATTATGAT+TGG | - | chr1.1:29480819-29480838 | MS.gene94992:intron | 25.0% |
| ! | CAGAGATATAGACATAAATA+GGG | + | chr1.1:29482129-29482148 | None:intergenic | 25.0% |
| ! | CGTGAAAATGAATATAAGAA+AGG | - | chr1.1:29479809-29479828 | MS.gene94992:intron | 25.0% |
| ! | CTCTCTATTTAAGCTTATTA+AGG | + | chr1.1:29480722-29480741 | None:intergenic | 25.0% |
| ! | GCAATACTAAATACAAATGT+AGG | + | chr1.1:29480786-29480805 | None:intergenic | 25.0% |
| ! | GGTTTAATCTGATTATTTGA+AGG | + | chr1.1:29479674-29479693 | None:intergenic | 25.0% |
| ! | GTCTACAAATCATCATTATT+CGG | - | chr1.1:29480490-29480509 | MS.gene94992:intron | 25.0% |
| ! | GTTGTAAGTATAAAATCTAG+AGG | - | chr1.1:29479278-29479297 | MS.gene94992:intron | 25.0% |
| ! | TAATTAATGGAAAGTGAAAC+AGG | + | chr1.1:29480815-29480834 | None:intergenic | 25.0% |
| ! | TATCTCTGATGTATGTAATT+AGG | - | chr1.1:29482141-29482160 | MS.gene94992:CDS | 25.0% |
| ! | TCAAATAATCAGATTAAACC+AGG | - | chr1.1:29479674-29479693 | MS.gene94992:intron | 25.0% |
| ! | TCAGAGATATAGACATAAAT+AGG | + | chr1.1:29482130-29482149 | None:intergenic | 25.0% |
| ! | TGTGTAATAATATCCTGTTA+AGG | - | chr1.1:29481617-29481636 | MS.gene94992:CDS | 25.0% |
| ! | TTCAAGCTAATTAGATGAAA+TGG | + | chr1.1:29480683-29480702 | None:intergenic | 25.0% |
| ! | TTCTAAACATTCTTGATATG+TGG | - | chr1.1:29482607-29482626 | MS.gene94992:CDS | 25.0% |
| ! | TTCTATTAATTATGTGGCAA+AGG | + | chr1.1:29482086-29482105 | None:intergenic | 25.0% |
| !! | ATCCTTTTACCTTATCAAAA+TGG | - | chr1.1:29480847-29480866 | MS.gene94992:intron | 25.0% |
| !! | CACTAACAATATGAATTTTC+TGG | - | chr1.1:29480023-29480042 | MS.gene94992:intron | 25.0% |
| !! | TCCTTTTACCTTATCAAAAT+GGG | - | chr1.1:29480848-29480867 | MS.gene94992:intron | 25.0% |
| !! | TTTAGTTTAGGACAAAAGAT+GGG | - | chr1.1:29482535-29482554 | MS.gene94992:CDS | 25.0% |
| !! | TTTTAATCCAGACAATATTC+TGG | + | chr1.1:29481097-29481116 | None:intergenic | 25.0% |
| !! | TTTTACATTACAAAATACCC+TGG | + | chr1.1:29481310-29481329 | None:intergenic | 25.0% |
| !!! | ACCTTTTATTTCTCAAGTAT+AGG | - | chr1.1:29481814-29481833 | MS.gene94992:CDS | 25.0% |
| !!! | CTTTTGTATTTTTGGATACA+AGG | - | chr1.1:29481016-29481035 | MS.gene94992:intron | 25.0% |
| !!! | TTTTAGTTTAGGACAAAAGA+TGG | - | chr1.1:29482534-29482553 | MS.gene94992:CDS | 25.0% |
| AAGAAATAGACAGAGAAAAG+GGG | - | chr1.1:29480356-29480375 | MS.gene94992:intron | 30.0% | |
| AAGAATGTTTAGAAGGAATG+AGG | + | chr1.1:29482601-29482620 | None:intergenic | 30.0% | |
| AAGCTAATTAGATGAAATGG+AGG | + | chr1.1:29480680-29480699 | None:intergenic | 30.0% | |
| AATTCCACCAGATTATACTT+GGG | - | chr1.1:29483064-29483083 | MS.gene94992:CDS | 30.0% | |
| ACACTTACAAGATTTGGAAA+AGG | - | chr1.1:29478895-29478914 | MS.gene94992:intron | 30.0% | |
| ACTTACAACAAAACTTCCAA+TGG | - | chr1.1:29479946-29479965 | MS.gene94992:intron | 30.0% | |
| ACTTACAAGATTTGGAAAAG+GGG | - | chr1.1:29478897-29478916 | MS.gene94992:intron | 30.0% | |
| AGAATTTACAGAAGAAGCTT+TGG | + | chr1.1:29479756-29479775 | None:intergenic | 30.0% | |
| AGTGAAAAAACACAAAAAGG+GGG | + | chr1.1:29482732-29482751 | None:intergenic | 30.0% | |
| ATTCCTATTGAAGATGGTAA+CGG | - | chr1.1:29479494-29479513 | MS.gene94992:intron | 30.0% | |
| CAAGAAATAGACAGAGAAAA+GGG | - | chr1.1:29480355-29480374 | MS.gene94992:intron | 30.0% | |
| CACTTACAAGATTTGGAAAA+GGG | - | chr1.1:29478896-29478915 | MS.gene94992:intron | 30.0% | |
| CAGTGAAAAAACACAAAAAG+GGG | + | chr1.1:29482733-29482752 | None:intergenic | 30.0% | |
| CCATATAATATCACCTTAAC+AGG | + | chr1.1:29481633-29481652 | None:intergenic | 30.0% | |
| CCTGTTAAGGTGATATTATA+TGG | - | chr1.1:29481630-29481649 | MS.gene94992:CDS | 30.0% | |
| CGACGAAGTAACAAAAATTT+CGG | + | chr1.1:29481171-29481190 | None:intergenic | 30.0% | |
| CTAACTTACAAATCACCAAA+TGG | + | chr1.1:29481965-29481984 | None:intergenic | 30.0% | |
| CTTACAACAAAACTTCCAAT+GGG | - | chr1.1:29479947-29479966 | MS.gene94992:intron | 30.0% | |
| GAAAATAAGCAGGAAAAGAA+AGG | - | chr1.1:29479530-29479549 | MS.gene94992:intron | 30.0% | |
| GAGAAGAACAAATCAAAGAA+AGG | - | chr1.1:29483119-29483138 | MS.gene94992:CDS | 30.0% | |
| TGATGCAACTAGATAGATAT+AGG | - | chr1.1:29482194-29482213 | MS.gene94992:CDS | 30.0% | |
| TTCACTTGGCTGTTAAATTA+GGG | - | chr1.1:29478595-29478614 | MS.gene94992:CDS | 30.0% | |
| TTTGCAACAATGTCAAGTAA+TGG | + | chr1.1:29479893-29479912 | None:intergenic | 30.0% | |
| ! | AGGAATGAGGTTTAATTTCA+AGG | + | chr1.1:29482588-29482607 | None:intergenic | 30.0% |
| ! | AGTTGTTTCAGAAGAAGAAA+AGG | + | chr1.1:29481266-29481285 | None:intergenic | 30.0% |
| ! | CATTTGGTGATTTGTAAGTT+AGG | - | chr1.1:29481963-29481982 | MS.gene94992:CDS | 30.0% |
| ! | GTAACAAGCAAGAGTATAAT+TGG | + | chr1.1:29480101-29480120 | None:intergenic | 30.0% |
| ! | TAGTGGACAAATGAATATTC+TGG | + | chr1.1:29481063-29481082 | None:intergenic | 30.0% |
| ! | TTTCAATGCATTTTTCCATG+TGG | - | chr1.1:29482678-29482697 | MS.gene94992:CDS | 30.0% |
| ! | TTTCGTTTTCAACAACCATT+TGG | - | chr1.1:29481947-29481966 | MS.gene94992:CDS | 30.0% |
| !! | ATCATTGGCATTGATAAGTT+TGG | + | chr1.1:29482405-29482424 | None:intergenic | 30.0% |
| !! | GATCAAAGTGTTCTTTTTCT+TGG | - | chr1.1:29478981-29479000 | MS.gene94992:intron | 30.0% |
| !! | TCATTGGCATTGATAAGTTT+GGG | + | chr1.1:29482404-29482423 | None:intergenic | 30.0% |
| !! | TCCCATTTTGATAAGGTAAA+AGG | + | chr1.1:29480852-29480871 | None:intergenic | 30.0% |
| !! | TTTTTGTTACTTCGTCGTAT+TGG | - | chr1.1:29481174-29481193 | MS.gene94992:intron | 30.0% |
| !!! | CTAGGTATTAGTTTTGCTTT+AGG | - | chr1.1:29481860-29481879 | MS.gene94992:CDS | 30.0% |
| !!! | GGTCTTATTGGTTTTAGTTT+AGG | - | chr1.1:29482523-29482542 | MS.gene94992:CDS | 30.0% |
| !!! | TTTTGTTGTTTAAGCTCTTG+AGG | - | chr1.1:29482051-29482070 | MS.gene94992:CDS | 30.0% |
| AAAAGTGACCAATACTCTGA+TGG | + | chr1.1:29482844-29482863 | None:intergenic | 35.0% | |
| AAACAAGAAACAGCAGGAAA+AGG | + | chr1.1:29481201-29481220 | None:intergenic | 35.0% | |
| AAACAGAAATGGTAGGATCT+TGG | - | chr1.1:29479225-29479244 | MS.gene94992:intron | 35.0% | |
| AAATCCTTCCTACACATTCT+AGG | - | chr1.1:29481897-29481916 | MS.gene94992:CDS | 35.0% | |
| AATCCTTCCTACACATTCTA+GGG | - | chr1.1:29481898-29481917 | MS.gene94992:CDS | 35.0% | |
| AATTTAACAGCCAAGTGAAG+AGG | + | chr1.1:29478594-29478613 | None:intergenic | 35.0% | |
| ACTCTTCACATACATCTCTT+GGG | - | chr1.1:29482493-29482512 | MS.gene94992:CDS | 35.0% | |
| AGAGACATTCCTATTGAAGA+TGG | - | chr1.1:29479488-29479507 | MS.gene94992:intron | 35.0% | |
| ATAAAATCTAGAGGAGTTCC+TGG | - | chr1.1:29479287-29479306 | MS.gene94992:intron | 35.0% | |
| ATAAGCAGGAAAAGAAAGGA+TGG | - | chr1.1:29479534-29479553 | MS.gene94992:intron | 35.0% | |
| ATACATCTACTTACCTTTCC+TGG | - | chr1.1:29481655-29481674 | MS.gene94992:CDS | 35.0% | |
| ATATAGTTAATGACCCCTGT+GGG | - | chr1.1:29480969-29480988 | MS.gene94992:intron | 35.0% | |
| ATCGTTAAGTTCTTCACTCT+CGG | + | chr1.1:29479360-29479379 | None:intergenic | 35.0% | |
| ATCTTGGTTTCAGTGGATAA+AGG | - | chr1.1:29482968-29482987 | MS.gene94992:CDS | 35.0% | |
| ATTAGGAACATGTGGGTAAA+AGG | - | chr1.1:29480323-29480342 | MS.gene94992:intron | 35.0% | |
| CAAATCTTGTAAGTGTCTGA+AGG | + | chr1.1:29478891-29478910 | None:intergenic | 35.0% | |
| CAAATTTCTCTGCTTCATCT+TGG | - | chr1.1:29482952-29482971 | MS.gene94992:CDS | 35.0% | |
| CAAGAAAGAAACTTCGATCA+CGG | + | chr1.1:29481415-29481434 | None:intergenic | 35.0% | |
| CAATTCCACCAGATTATACT+TGG | - | chr1.1:29483063-29483082 | MS.gene94992:CDS | 35.0% | |
| CAATTGCCTTCTTTCATCTT+CGG | + | chr1.1:29479390-29479409 | None:intergenic | 35.0% | |
| CATGCATGTTATGAAAAAGC+AGG | - | chr1.1:29480137-29480156 | MS.gene94992:intron | 35.0% | |
| CATGTTATGAAAAAGCAGGA+CGG | - | chr1.1:29480141-29480160 | MS.gene94992:intron | 35.0% | |
| CCAACAAAGTTTCTGATCAT+TGG | + | chr1.1:29482420-29482439 | None:intergenic | 35.0% | |
| CCAATGATCAGAAACTTTGT+TGG | - | chr1.1:29482417-29482436 | MS.gene94992:CDS | 35.0% | |
| CTGTGATACCTTTCATTTCA+AGG | - | chr1.1:29478859-29478878 | MS.gene94992:intron | 35.0% | |
| CTTCACTTGGCTGTTAAATT+AGG | - | chr1.1:29478594-29478613 | MS.gene94992:CDS | 35.0% | |
| CTTCAGACACTTACAAGATT+TGG | - | chr1.1:29478889-29478908 | MS.gene94992:intron | 35.0% | |
| GAAAAGGAGAGGTAAATACA+TGG | + | chr1.1:29481250-29481269 | None:intergenic | 35.0% | |
| GAAAAGGTGAGCGATTTATT+GGG | - | chr1.1:29479641-29479660 | MS.gene94992:intron | 35.0% | |
| GAGAAGATAACAGTACTATG+AGG | - | chr1.1:29480384-29480403 | MS.gene94992:intron | 35.0% | |
| GAGGAACATAATAGAAGAGT+AGG | - | chr1.1:29480403-29480422 | MS.gene94992:intron | 35.0% | |
| GCAAGAAATAGACAGAGAAA+AGG | - | chr1.1:29480354-29480373 | MS.gene94992:intron | 35.0% | |
| GCATAAGCTAAAAGTGGTAA+AGG | + | chr1.1:29480557-29480576 | None:intergenic | 35.0% | |
| TAATCTGGTGGAATTGCAAA+CGG | + | chr1.1:29483059-29483078 | None:intergenic | 35.0% | |
| TACACATTGGTACTCTAGTA+AGG | + | chr1.1:29481603-29481622 | None:intergenic | 35.0% | |
| TACTCTTCACATACATCTCT+TGG | - | chr1.1:29482492-29482511 | MS.gene94992:CDS | 35.0% | |
| TAGAAAACCCTAGAATGTGT+AGG | + | chr1.1:29481908-29481927 | None:intergenic | 35.0% | |
| TATATAGTTAATGACCCCTG+TGG | - | chr1.1:29480968-29480987 | MS.gene94992:intron | 35.0% | |
| TCACTTGGCTGTTAAATTAG+GGG | - | chr1.1:29478596-29478615 | MS.gene94992:CDS | 35.0% | |
| TCCTGCATTGTTACTCATTA+AGG | - | chr1.1:29481689-29481708 | MS.gene94992:CDS | 35.0% | |
| TCCTTAATGAGTAACAATGC+AGG | + | chr1.1:29481693-29481712 | None:intergenic | 35.0% | |
| TGAAAAGGTGAGCGATTTAT+TGG | - | chr1.1:29479640-29479659 | MS.gene94992:intron | 35.0% | |
| TGTTAAATTAGGGGATGAAG+CGG | - | chr1.1:29478605-29478624 | MS.gene94992:CDS | 35.0% | |
| TTAACAGGAAAAGTTCCCAT+TGG | + | chr1.1:29479965-29479984 | None:intergenic | 35.0% | |
| TTACCTAAGCTGTGTAATGT+GGG | - | chr1.1:29478471-29478490 | MS.gene94992:CDS | 35.0% | |
| TTAGGAACATGTGGGTAAAA+GGG | - | chr1.1:29480324-29480343 | MS.gene94992:intron | 35.0% | |
| TTCTCTTTGCGTAGATGAAA+AGG | - | chr1.1:29479625-29479644 | MS.gene94992:intron | 35.0% | |
| TTTACCTAAGCTGTGTAATG+TGG | - | chr1.1:29478470-29478489 | MS.gene94992:CDS | 35.0% | |
| TTTCAGAAGAAGAAAAGGAG+AGG | + | chr1.1:29481261-29481280 | None:intergenic | 35.0% | |
| ! | AATGGGAACTTTTCCTGTTA+AGG | - | chr1.1:29479964-29479983 | MS.gene94992:intron | 35.0% |
| ! | ACTGAACAATGATAGTGATG+AGG | - | chr1.1:29479439-29479458 | MS.gene94992:intron | 35.0% |
| ! | AGTGTTCTTTTTCTTGGTGA+TGG | - | chr1.1:29478987-29479006 | MS.gene94992:intron | 35.0% |
| ! | ATTTTCTATCCTACTACTGC+TGG | + | chr1.1:29483027-29483046 | None:intergenic | 35.0% |
| ! | CAATAGTGGAGAAAATAAGC+AGG | - | chr1.1:29479520-29479539 | MS.gene94992:intron | 35.0% |
| ! | CTGAACAATGATAGTGATGA+GGG | - | chr1.1:29479440-29479459 | MS.gene94992:intron | 35.0% |
| ! | GAGGATGAGAGACTTTTATA+TGG | - | chr1.1:29478812-29478831 | MS.gene94992:intron | 35.0% |
| ! | GATGTATGTGAAGAGTATGA+TGG | + | chr1.1:29482489-29482508 | None:intergenic | 35.0% |
| ! | TGAACAATGATAGTGATGAG+GGG | - | chr1.1:29479441-29479460 | MS.gene94992:intron | 35.0% |
| ! | TTTTGACCGAAGATGAAAGA+AGG | - | chr1.1:29479381-29479400 | MS.gene94992:intron | 35.0% |
| !! | ATAGGAATGTCTCTAAAGCT+TGG | + | chr1.1:29479482-29479501 | None:intergenic | 35.0% |
| !! | GCTGTGATTTTGAAGGATTA+TGG | - | chr1.1:29478423-29478442 | MS.gene94992:CDS | 35.0% |
| !! | GTCTTTGTGTCACTTTGATT+TGG | - | chr1.1:29481574-29481593 | MS.gene94992:CDS | 35.0% |
| !! | GTTCAACTCCCATTTTGATA+AGG | + | chr1.1:29480859-29480878 | None:intergenic | 35.0% |
| !! | TTCGATTTTAGAGGAAGAGA+AGG | - | chr1.1:29478515-29478534 | MS.gene94992:CDS | 35.0% |
| !!! | GGAGGGTTTTAAAACATCAT+AGG | - | chr1.1:29482702-29482721 | MS.gene94992:CDS | 35.0% |
| !!! | TTGTAGCACCGATGTTTTAT+GGG | - | chr1.1:29480602-29480621 | MS.gene94992:intron | 35.0% |
| AAACCCTAGAATGTGTAGGA+AGG | + | chr1.1:29481904-29481923 | None:intergenic | 40.0% | |
| AACCAAAACTCGTGAGTGAA+TGG | - | chr1.1:29481475-29481494 | MS.gene94992:intron | 40.0% | |
| AAGGATTGAGGCCTATTCTT+TGG | - | chr1.1:29479828-29479847 | MS.gene94992:intron | 40.0% | |
| AATCTGGTGGAATTGCAAAC+GGG | + | chr1.1:29483058-29483077 | None:intergenic | 40.0% | |
| ACCGCATACCCATAAAACAT+CGG | + | chr1.1:29480613-29480632 | None:intergenic | 40.0% | |
| AGAAGAGTAGGTGTGTTCTT+GGG | - | chr1.1:29480415-29480434 | MS.gene94992:intron | 40.0% | |
| AGATGAAAGAAGGCAATTGG+AGG | - | chr1.1:29479391-29479410 | MS.gene94992:intron | 40.0% | |
| AGCAGAAGTCGTCATAAAGA+TGG | - | chr1.1:29479782-29479801 | MS.gene94992:intron | 40.0% | |
| AGCTAAAAGTGGTAAAGGTG+AGG | + | chr1.1:29480552-29480571 | None:intergenic | 40.0% | |
| AGGATTATGGTGAGCTTAAG+AGG | - | chr1.1:29478436-29478455 | MS.gene94992:CDS | 40.0% | |
| ATAGACAGAGAAAAGGGGTA+AGG | - | chr1.1:29480361-29480380 | MS.gene94992:intron | 40.0% | |
| ATATCATGCATGCCATGTGT+TGG | - | chr1.1:29480293-29480312 | MS.gene94992:intron | 40.0% | |
| ATGCATGCTACAGCATAAGT+AGG | + | chr1.1:29480124-29480143 | None:intergenic | 40.0% | |
| ATTCTGTTGAGGTTGTTGTG+AGG | - | chr1.1:29479702-29479721 | MS.gene94992:intron | 40.0% | |
| CAATCTCTGCTGTGATTGAT+AGG | - | chr1.1:29478544-29478563 | MS.gene94992:CDS | 40.0% | |
| CAATGCAAACAAGAAACAGC+AGG | + | chr1.1:29481207-29481226 | None:intergenic | 40.0% | |
| CAGGAAAAGAAAGGATGGTT+TGG | - | chr1.1:29479539-29479558 | MS.gene94992:intron | 40.0% | |
| CAGGAGAAAACAGAAATGGT+AGG | - | chr1.1:29479218-29479237 | MS.gene94992:intron | 40.0% | |
| CATGATCTCACACAAGGAAA+AGG | - | chr1.1:29479046-29479065 | MS.gene94992:intron | 40.0% | |
| CGAAGATGAAAGAAGGCAAT+TGG | - | chr1.1:29479388-29479407 | MS.gene94992:intron | 40.0% | |
| CTACCGTTACCATCTTCAAT+AGG | + | chr1.1:29479500-29479519 | None:intergenic | 40.0% | |
| GCTGAAATGCTTATGGTTGT+TGG | - | chr1.1:29478630-29478649 | MS.gene94992:CDS | 40.0% | |
| GGAGTTTGCAGAATGAACAA+GGG | - | chr1.1:29478661-29478680 | MS.gene94992:CDS | 40.0% | |
| GGTGCAATCCTTGAAATGAA+AGG | + | chr1.1:29478870-29478889 | None:intergenic | 40.0% | |
| GTGACTCTTTCTGCATATTC+AGG | - | chr1.1:29482797-29482816 | MS.gene94992:CDS | 40.0% | |
| GTGAGCTTAAGAGGATACTT+GGG | - | chr1.1:29478445-29478464 | MS.gene94992:CDS | 40.0% | |
| TAATGTGGGTGAGATTCGTA+CGG | - | chr1.1:29478485-29478504 | MS.gene94992:CDS | 40.0% | |
| TAGAAGAGTAGGTGTGTTCT+TGG | - | chr1.1:29480414-29480433 | MS.gene94992:intron | 40.0% | |
| TAGACAGAGAAAAGGGGTAA+GGG | - | chr1.1:29480362-29480381 | MS.gene94992:intron | 40.0% | |
| TCTACGCAAAGAGAACTTCT+TGG | + | chr1.1:29479620-29479639 | None:intergenic | 40.0% | |
| TCTTGCTCCAGAATATTGTC+TGG | - | chr1.1:29481087-29481106 | MS.gene94992:intron | 40.0% | |
| TGAGCTTAAGAGGATACTTG+GGG | - | chr1.1:29478446-29478465 | MS.gene94992:CDS | 40.0% | |
| TGCATGCTACAGCATAAGTA+GGG | + | chr1.1:29480123-29480142 | None:intergenic | 40.0% | |
| TGGAGTTTGCAGAATGAACA+AGG | - | chr1.1:29478660-29478679 | MS.gene94992:CDS | 40.0% | |
| TGGGTATGCGGTAAAATTAG+TGG | - | chr1.1:29480621-29480640 | MS.gene94992:intron | 40.0% | |
| TTCTGTTGAGGTTGTTGTGA+GGG | - | chr1.1:29479703-29479722 | MS.gene94992:intron | 40.0% | |
| TTTGGCGAAAGCCAAAGAAT+AGG | + | chr1.1:29479842-29479861 | None:intergenic | 40.0% | |
| ! | AAAATCACAGCCTTATGCAC+AGG | + | chr1.1:29478414-29478433 | None:intergenic | 40.0% |
| ! | ACCACCTTAATCTGAAGTGT+CGG | - | chr1.1:29480264-29480283 | MS.gene94992:intron | 40.0% |
| ! | ACCGATGTTTTATGGGTATG+CGG | - | chr1.1:29480609-29480628 | MS.gene94992:intron | 40.0% |
| ! | CAATGCATTTTTCCATGTGG+TGG | - | chr1.1:29482681-29482700 | MS.gene94992:CDS | 40.0% |
| ! | CTACCATTTCTGTTTTCTCC+TGG | + | chr1.1:29479220-29479239 | None:intergenic | 40.0% |
| ! | GAAAAGAAAGGATGGTTTGG+TGG | - | chr1.1:29479542-29479561 | MS.gene94992:intron | 40.0% |
| ! | GCATAAGGCTGTGATTTTGA+AGG | - | chr1.1:29478416-29478435 | MS.gene94992:CDS | 40.0% |
| ! | GGTGTTGCGAATTCATCTAA+TGG | + | chr1.1:29482888-29482907 | None:intergenic | 40.0% |
| ! | TTCCATTCACTCACGAGTTT+TGG | + | chr1.1:29481480-29481499 | None:intergenic | 40.0% |
| ! | TTCTTTTGCCTCAGTTGACT+TGG | - | chr1.1:29479189-29479208 | MS.gene94992:intron | 40.0% |
| !! | AAAACATCGGTGCTACAAGT+TGG | + | chr1.1:29480600-29480619 | None:intergenic | 40.0% |
| !! | AAACATCGGTGCTACAAGTT+GGG | + | chr1.1:29480599-29480618 | None:intergenic | 40.0% |
| !! | CCTATGGATTAGGAACATGT+GGG | - | chr1.1:29480316-29480335 | MS.gene94992:intron | 40.0% |
| !! | GTGAGTTCTTTTTCACGTAG+AGG | - | chr1.1:29481355-29481374 | MS.gene94992:intron | 40.0% |
| !! | TTATGGTTGTTGGTGCTGAT+TGG | - | chr1.1:29478640-29478659 | MS.gene94992:CDS | 40.0% |
| !!! | CACTCACGAGTTTTGGTTTT+CGG | + | chr1.1:29481473-29481492 | None:intergenic | 40.0% |
| !!! | CTTGTAGCACCGATGTTTTA+TGG | - | chr1.1:29480601-29480620 | MS.gene94992:intron | 40.0% |
| !!! | TCTAGATGATGCTGCTTTTG+CGG | - | chr1.1:29479082-29479101 | MS.gene94992:intron | 40.0% |
| !!! | TTTTAAAACCCTCCACCACA+TGG | + | chr1.1:29482696-29482715 | None:intergenic | 40.0% |
| !!! | TTTTCTTGGTGATGGTTCAG+AGG | - | chr1.1:29478995-29479014 | MS.gene94992:intron | 40.0% |
| AACCTGCAGCAGATGAACTA+GGG | + | chr1.1:29483004-29483023 | None:intergenic | 45.0% | |
| ACCGACACTTCAGATTAAGG+TGG | + | chr1.1:29480268-29480287 | None:intergenic | 45.0% | |
| ACGCAAAGAGAACTTCTTGG+TGG | + | chr1.1:29479617-29479636 | None:intergenic | 45.0% | |
| ACTCTGCATGATCTCACACA+AGG | - | chr1.1:29479040-29479059 | MS.gene94992:intron | 45.0% | |
| AGCATTATCAGCCTCTTGCT+TGG | - | chr1.1:29478745-29478764 | MS.gene94992:intron | 45.0% | |
| AGTGACCAATACTCTGATGG+TGG | + | chr1.1:29482841-29482860 | None:intergenic | 45.0% | |
| ATTGGAGGATGCACTTAAGC+TGG | - | chr1.1:29479406-29479425 | MS.gene94992:intron | 45.0% | |
| CAGAGAAATTTGTCGCTGCA+GGG | + | chr1.1:29482944-29482963 | None:intergenic | 45.0% | |
| CCCACATGTTCCTAATCCAT+AGG | + | chr1.1:29480319-29480338 | None:intergenic | 45.0% | |
| CTAATCCATAGGCCAACACA+TGG | + | chr1.1:29480308-29480327 | None:intergenic | 45.0% | |
| CTGCTTCATCTTGGTTTCAG+TGG | - | chr1.1:29482961-29482980 | MS.gene94992:CDS | 45.0% | |
| CTTGGGCAAAATGGTGTAGA+AGG | - | chr1.1:29478763-29478782 | MS.gene94992:intron | 45.0% | |
| GAAGCTACTGAATCCAGGAA+AGG | + | chr1.1:29481671-29481690 | None:intergenic | 45.0% | |
| GAGCTTAAGAGGATACTTGG+GGG | - | chr1.1:29478447-29478466 | MS.gene94992:CDS | 45.0% | |
| GATCTCACACAAGGAAAAGG+AGG | - | chr1.1:29479049-29479068 | MS.gene94992:intron | 45.0% | |
| GCAGTGACCCAAGTATAATC+TGG | + | chr1.1:29483074-29483093 | None:intergenic | 45.0% | |
| GCATTATCAGCCTCTTGCTT+GGG | - | chr1.1:29478746-29478765 | MS.gene94992:intron | 45.0% | |
| GCCTGAGTAACATCAATACC+AGG | + | chr1.1:29479167-29479186 | None:intergenic | 45.0% | |
| GGGATCGATGTTGCAAAGTT+TGG | - | chr1.1:29478381-29478400 | MS.gene94992:CDS | 45.0% | |
| GGGTAGTAAAGAGCTAGCAA+GGG | + | chr1.1:29480579-29480598 | None:intergenic | 45.0% | |
| GGTAATAAGTGGGAGAGTAG+TGG | + | chr1.1:29481150-29481169 | None:intergenic | 45.0% | |
| GGTAGGATCTTGGAAAGCTA+AGG | - | chr1.1:29479235-29479254 | MS.gene94992:intron | 45.0% | |
| GGTGAGCTTAAGAGGATACT+TGG | - | chr1.1:29478444-29478463 | MS.gene94992:CDS | 45.0% | |
| GTGACCAATACTCTGATGGT+GGG | + | chr1.1:29482840-29482859 | None:intergenic | 45.0% | |
| GTGACCCAAGTATAATCTGG+TGG | + | chr1.1:29483071-29483090 | None:intergenic | 45.0% | |
| GTTTGCAGAATGAACAAGGG+TGG | - | chr1.1:29478664-29478683 | MS.gene94992:CDS | 45.0% | |
| TCACCCACATTACACAGCTT+AGG | + | chr1.1:29478477-29478496 | None:intergenic | 45.0% | |
| TCTAAGGGCTGACATGACTT+TGG | - | chr1.1:29478926-29478945 | MS.gene94992:intron | 45.0% | |
| TCTGTTGAGGTTGTTGTGAG+GGG | - | chr1.1:29479704-29479723 | MS.gene94992:intron | 45.0% | |
| TGAGATCATGCAGAGTGATC+CGG | + | chr1.1:29479036-29479055 | None:intergenic | 45.0% | |
| TGGGTAGTAAAGAGCTAGCA+AGG | + | chr1.1:29480580-29480599 | None:intergenic | 45.0% | |
| TGGTCATAGTCCTGTGCATA+AGG | - | chr1.1:29478401-29478420 | MS.gene94992:CDS | 45.0% | |
| ! | CATGTGTTGGCCTATGGATT+AGG | - | chr1.1:29480306-29480325 | MS.gene94992:intron | 45.0% |
| ! | GAAAAGGGGTGCGAATCTAA+GGG | - | chr1.1:29478911-29478930 | MS.gene94992:intron | 45.0% |
| ! | GCAAGGGCATAAGCTAAAAG+TGG | + | chr1.1:29480563-29480582 | None:intergenic | 45.0% |
| ! | GGAAGCGGTTTCGATTTTAG+AGG | - | chr1.1:29478506-29478525 | MS.gene94992:CDS | 45.0% |
| ! | GTAGAGGAGTGTGCTTTAAG+AGG | - | chr1.1:29481371-29481390 | MS.gene94992:intron | 45.0% |
| ! | TAACGTGTCGATGTTGTGTC+TGG | + | chr1.1:29480170-29480189 | None:intergenic | 45.0% |
| ! | TGCATTTTTCCATGTGGTGG+AGG | - | chr1.1:29482684-29482703 | MS.gene94992:CDS | 45.0% |
| !! | AGAAAGGATGGTTTGGTGGA+TGG | - | chr1.1:29479546-29479565 | MS.gene94992:intron | 45.0% |
| !! | AGCACCGACACTTCAGATTA+AGG | + | chr1.1:29480271-29480290 | None:intergenic | 45.0% |
| !! | ATACATCTCTTGGGCTAGCT+TGG | - | chr1.1:29482502-29482521 | MS.gene94992:CDS | 45.0% |
| !! | ATGACTTTGGCTGGTTTCGA+CGG | - | chr1.1:29478939-29478958 | MS.gene94992:intron | 45.0% |
| !! | GATGGTAACGGTAGCAATAG+TGG | - | chr1.1:29479506-29479525 | MS.gene94992:intron | 45.0% |
| !! | GCATTTTTCCATGTGGTGGA+GGG | - | chr1.1:29482685-29482704 | MS.gene94992:CDS | 45.0% |
| !! | GCCTATGGATTAGGAACATG+TGG | - | chr1.1:29480315-29480334 | MS.gene94992:intron | 45.0% |
| !! | GCCTGGTATTGATGTTACTC+AGG | - | chr1.1:29479163-29479182 | MS.gene94992:intron | 45.0% |
| !! | TATTCAGGTTGCCATTCCTG+TGG | - | chr1.1:29482812-29482831 | MS.gene94992:CDS | 45.0% |
| !! | TGAAGAGGAGTATCGCGATT+CGG | + | chr1.1:29478579-29478598 | None:intergenic | 45.0% |
| !! | TTCTGGAGCAAGAAGAGTAG+TGG | + | chr1.1:29481080-29481099 | None:intergenic | 45.0% |
| !! | TTGGGCTAGCTTGGTCTTAT+TGG | - | chr1.1:29482511-29482530 | MS.gene94992:CDS | 45.0% |
| !! | TTGGTGATGGTTCAGAGGAT+GGG | - | chr1.1:29479000-29479019 | MS.gene94992:intron | 45.0% |
| !!! | TTTTGCCTCAGTTGACTTGG+AGG | - | chr1.1:29479192-29479211 | MS.gene94992:intron | 45.0% |
| ACCAGGGAGACATTCTGTTG+AGG | - | chr1.1:29479691-29479710 | MS.gene94992:intron | 50.0% | |
| ACCTCAACAGAATGTCTCCC+TGG | + | chr1.1:29479695-29479714 | None:intergenic | 50.0% | |
| AGCCTCTTGCTTGGGCAAAA+TGG | - | chr1.1:29478754-29478773 | MS.gene94992:intron | 50.0% | |
| AGCGGCTGCTGAAATGCTTA+TGG | - | chr1.1:29478623-29478642 | MS.gene94992:CDS | 50.0% | |
| CTAAGCAGTCAGCACAAAGG+AGG | + | chr1.1:29480944-29480963 | None:intergenic | 50.0% | |
| GAACCTGCAGCAGATGAACT+AGG | + | chr1.1:29483005-29483024 | None:intergenic | 50.0% | |
| GAGATCATGCAGAGTGATCC+GGG | + | chr1.1:29479035-29479054 | None:intergenic | 50.0% | |
| GAGCTAAGCAGTCAGCACAA+AGG | + | chr1.1:29480947-29480966 | None:intergenic | 50.0% | |
| GCAGAGAAATTTGTCGCTGC+AGG | + | chr1.1:29482945-29482964 | None:intergenic | 50.0% | |
| GCGCCAGGAGAAAACAGAAA+TGG | - | chr1.1:29479214-29479233 | MS.gene94992:intron | 50.0% | |
| GGTTCCCACCATCAGAGTAT+TGG | - | chr1.1:29482833-29482852 | MS.gene94992:CDS | 50.0% | |
| GTGTAGAAGGTTGCCTCGTT+TGG | - | chr1.1:29478776-29478795 | MS.gene94992:intron | 50.0% | |
| TCATCGTCTGTCATAGCTCC+AGG | + | chr1.1:29479308-29479327 | None:intergenic | 50.0% | |
| TCGCGATACTCCTCTTCACT+TGG | - | chr1.1:29478581-29478600 | MS.gene94992:CDS | 50.0% | |
| TGCAGGAAGCTACTGAATCC+AGG | + | chr1.1:29481676-29481695 | None:intergenic | 50.0% | |
| ! | CACCATTTTGCCCAAGCAAG+AGG | + | chr1.1:29478759-29478778 | None:intergenic | 50.0% |
| ! | CCTGACATGGATGGACTTGT+CGG | + | chr1.1:29482912-29482931 | None:intergenic | 50.0% |
| ! | GGAAAAGGGGTGCGAATCTA+AGG | - | chr1.1:29478910-29478929 | MS.gene94992:intron | 50.0% |
| !! | CTTGGTGATGGTTCAGAGGA+TGG | - | chr1.1:29478999-29479018 | MS.gene94992:intron | 50.0% |
| !! | GAGCAAGCACTGACCTTAAC+AGG | + | chr1.1:29479980-29479999 | None:intergenic | 50.0% |
| AGGGCTGACATGACTTTGGC+TGG | - | chr1.1:29478930-29478949 | MS.gene94992:intron | 55.0% | |
| CACATCGTCGCTACCAAACG+AGG | + | chr1.1:29478792-29478811 | None:intergenic | 55.0% | |
| CCGACAAGTCCATCCATGTC+AGG | - | chr1.1:29482909-29482928 | MS.gene94992:CDS | 55.0% | |
| CTCTCTTCGCCTGACATGGA+TGG | + | chr1.1:29482921-29482940 | None:intergenic | 55.0% | |
| CTGCAGCAGATGAACTAGGG+CGG | + | chr1.1:29483001-29483020 | None:intergenic | 55.0% | |
| CTGCAGGTTCCAGCAGTAGT+AGG | - | chr1.1:29483015-29483034 | MS.gene94992:CDS | 55.0% | |
| GCAGATGAACTAGGGCGGTA+TGG | + | chr1.1:29482996-29483015 | None:intergenic | 55.0% | |
| GGGTGAGATTCGTACGGAAG+CGG | - | chr1.1:29478491-29478510 | MS.gene94992:CDS | 55.0% | |
| GGTGGAATTGCAAACGGGTC+TGG | + | chr1.1:29483053-29483072 | None:intergenic | 55.0% | |
| TTGTGAGGGGCGATGAGCAA+CGG | - | chr1.1:29479717-29479736 | MS.gene94992:intron | 55.0% | |
| ! | GACATGGATGGACTTGTCGG+CGG | + | chr1.1:29482909-29482928 | None:intergenic | 55.0% |
| ! | GCATGCCATGTGTTGGCCTA+TGG | - | chr1.1:29480300-29480319 | MS.gene94992:intron | 55.0% |
| !! | ACTCTGATGGTGGGAACCAC+AGG | + | chr1.1:29482831-29482850 | None:intergenic | 55.0% |
| !! | CTCGTTTGGTAGCGACGATG+TGG | - | chr1.1:29478790-29478809 | MS.gene94992:intron | 55.0% |
| !! | GATGGTGGGAACCACAGGAA+TGG | + | chr1.1:29482826-29482845 | None:intergenic | 55.0% |
| !! | GTTTGGTAGCGACGATGTGG+AGG | - | chr1.1:29478793-29478812 | MS.gene94992:intron | 55.0% |
| AGGGCTCTCTTCGCCTGACA+TGG | + | chr1.1:29482925-29482944 | None:intergenic | 60.0% | |
| CGCCCTAGTTCATCTGCTGC+AGG | - | chr1.1:29482999-29483018 | MS.gene94992:CDS | 60.0% | |
| GAGGATGGGAAAGTCCAGCC+CGG | - | chr1.1:29479014-29479033 | MS.gene94992:intron | 60.0% | |
| TCATGCAGAGTGATCCGGGC+TGG | + | chr1.1:29479031-29479050 | None:intergenic | 60.0% | |
| TGGCGCCTCCAAGTCAACTG+AGG | + | chr1.1:29479200-29479219 | None:intergenic | 60.0% | |
| !! | TCAGTTGACTTGGAGGCGCC+AGG | - | chr1.1:29479199-29479218 | MS.gene94992:intron | 60.0% |
| TGAGGGGCGATGAGCAACGG+AGG | - | chr1.1:29479720-29479739 | MS.gene94992:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 29478375 | 29483160 | 29478375 | ID=MS.gene94992 |
| chr1.1 | mRNA | 29478375 | 29483160 | 29478375 | ID=MS.gene94992.t1;Parent=MS.gene94992 |
| chr1.1 | exon | 29481550 | 29483160 | 29481550 | ID=MS.gene94992.t1.exon1;Parent=MS.gene94992.t1 |
| chr1.1 | CDS | 29481550 | 29483160 | 29481550 | ID=cds.MS.gene94992.t1;Parent=MS.gene94992.t1 |
| chr1.1 | exon | 29478375 | 29478716 | 29478375 | ID=MS.gene94992.t1.exon2;Parent=MS.gene94992.t1 |
| chr1.1 | CDS | 29478375 | 29478716 | 29478375 | ID=cds.MS.gene94992.t1;Parent=MS.gene94992.t1 |
| Gene Sequence |
| Protein sequence |
