AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene95305


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95305.t1 MTR_8g028015 99.535 215 1 0 1 215 1 215 3.56e-151 424
MS.gene95305.t1 MTR_8g079890 52.344 128 59 2 1 127 1 127 1.09e-38 136
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95305.t1 AT5G12230 62.727 220 75 3 1 215 1 218 3.08e-55 180
MS.gene95305.t1 AT5G19480 60.000 215 77 3 1 214 1 207 2.89e-53 174
MS.gene95305.t1 AT5G19480 60.000 215 77 3 1 214 1 207 2.89e-53 174
MS.gene95305.t1 AT5G19480 60.000 215 77 3 1 214 1 207 2.89e-53 174
MS.gene95305.t1 AT5G19480 60.000 215 77 3 1 214 1 207 2.89e-53 174

Find 75 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAAATAATAGAGCTTTAC+CGG 0.331087 8.1:+73816606 MS.gene95305:intron
TGGGAGCTGTTTCCCTTAGT+TGG 0.360962 8.1:-73814262 None:intergenic
TCTAACCTGCTGGACTTACT+TGG 0.397262 8.1:-73816649 None:intergenic
AGCTCAAGAATTGATGAGTT+GGG 0.406971 8.1:+73815370 MS.gene95305:CDS
AGCATAAGAAGCACAAAGAC+AGG 0.416670 8.1:+73814513 MS.gene95305:CDS
AAAAGGAGATGGCATGCAAT+TGG 0.425102 8.1:+73814154 MS.gene95305:CDS
TCCAGAGTTACTCTAGTTGC+TGG 0.432327 8.1:-73816463 None:intergenic
TCGTGCCTCACGACGCCCTC+TGG 0.434721 8.1:+73818645 MS.gene95305:CDS
AGTGTCAGGAGGTGGAGGTT+TGG 0.434813 8.1:-73816767 None:intergenic
TCAAGGAGGCTTTCCAACTA+AGG 0.441770 8.1:+73814249 MS.gene95305:CDS
AAAGGAATACCAACAATTGC+AGG 0.443447 8.1:+73814458 MS.gene95305:CDS
TTGTTGCACTGTCTTGCAAT+AGG 0.449675 8.1:+73818594 MS.gene95305:CDS
TGATGTAACTCCTCCTACTC+TGG 0.464313 8.1:+73818620 MS.gene95305:CDS
TTTCTTTGAGTGATCAGCAC+TGG 0.470774 8.1:-73814642 None:intergenic
ATTGAATGTAACACAGCAAA+AGG 0.480679 8.1:-73818544 None:intergenic
TTTCCCTAATAGGCGGAGAA+AGG 0.481542 8.1:+73814440 MS.gene95305:intron
TTATTTGTTGCAGAGTAGCT+AGG 0.484718 8.1:+73817398 MS.gene95305:intron
TATTTGTTGCAGAGTAGCTA+GGG 0.487765 8.1:+73817399 MS.gene95305:intron
ACAGGGATAAGGACAAGGAC+AGG 0.491569 8.1:+73814531 MS.gene95305:CDS
AATTCACCTGATGGTGGAAA+AGG 0.493016 8.1:+73817451 MS.gene95305:CDS
CACTACCTGCACAGTGTAGT+AGG 0.493509 8.1:+73814116 MS.gene95305:CDS
GCCACTCACACACCAGTGTC+AGG 0.493664 8.1:-73816781 None:intergenic
GAGCTCAAGAATTGATGAGT+TGG 0.493987 8.1:+73815369 MS.gene95305:CDS
GGAGACACAGAAGTAAGAAA+AGG 0.503306 8.1:+73814137 MS.gene95305:CDS
CTCAAAGAAACATCATGAAA+AGG 0.506069 8.1:+73814655 MS.gene95305:CDS
ATAAGCCAAGTAAGTCCAGC+AGG 0.513151 8.1:+73816644 MS.gene95305:CDS
TCCAGCAACTAGAGTAACTC+TGG 0.513226 8.1:+73816462 MS.gene95305:CDS
ATCATGATAATCTTATAGTC+AGG 0.516918 8.1:-73817424 None:intergenic
TCCGCGATTGACACAGGAAG+CGG 0.522644 8.1:-73814089 None:intergenic
TGGATTGATTGCATGAGTTG+TGG 0.529410 8.1:-73816747 None:intergenic
TCGGATACAGCCTTTCGACT+TGG 0.534768 8.1:+73814220 MS.gene95305:CDS
GAAGCACAAAGACAGGGATA+AGG 0.543181 8.1:+73814520 MS.gene95305:CDS
TGACTATAAGATTATCATGA+TGG 0.546672 8.1:+73817426 MS.gene95305:CDS
CACACACCAGTGTCAGGAGG+TGG 0.565214 8.1:-73816775 None:intergenic
CAAGGAGGCTTTCCAACTAA+GGG 0.568109 8.1:+73814250 MS.gene95305:CDS
GCTCAAGAATTGATGAGTTG+GGG 0.569389 8.1:+73815371 MS.gene95305:CDS
TCAGGACCGAGGGAGTTGAC+AGG 0.569665 8.1:+73814005 MS.gene95305:intron
TTATCACTTACAGAAGAGTC+CGG 0.569759 8.1:-73816625 None:intergenic
TCTTACAGCAGGCAAATCGA+TGG 0.570777 8.1:-73814282 None:intergenic
CTGATGGTGGAAAAGGAAGC+AGG 0.572261 8.1:+73817458 MS.gene95305:CDS
TTTCGACTTGGATATACTCA+AGG 0.572941 8.1:+73814232 MS.gene95305:CDS
AGGCACGACACCAGAGTAGG+AGG 0.579231 8.1:-73818630 None:intergenic
CTTACAGCAGGCAAATCGAT+GGG 0.583764 8.1:-73814281 None:intergenic
TGTGTGTCCGCGATTGACAC+AGG 0.584301 8.1:-73814095 None:intergenic
CGCTAAGAGGAGGCGTCGTG+AGG 0.587756 8.1:-73818675 None:intergenic
ACACCAGTGTCAGGAGGTGG+AGG 0.591353 8.1:-73816772 None:intergenic
ACAGCACCTGTCAACTCCCT+CGG 0.592323 8.1:-73814011 None:intergenic
TGTCTCCTACTACACTGTGC+AGG 0.593991 8.1:-73814121 None:intergenic
TGGCAGAGTGTATCGCTAAG+AGG 0.597757 8.1:-73818688 None:intergenic
GCATAAGAAGCACAAAGACA+GGG 0.602938 8.1:+73814514 MS.gene95305:CDS
AAACCTCCACCTCCTGACAC+TGG 0.605460 8.1:+73816769 MS.gene95305:CDS
ACAGAAGTAAGAAAAGGAGA+TGG 0.606393 8.1:+73814143 MS.gene95305:CDS
GAGGGAGTTGACAGGTGCTG+TGG 0.611611 8.1:+73814013 MS.gene95305:CDS
AGAGTAACTCTGGATGACAT+AGG 0.612032 8.1:+73816472 MS.gene95305:CDS
AATTGAATCATGGATCCTGA+AGG 0.619824 8.1:+73813533 None:intergenic
CAAAGACAGGGATAAGGACA+AGG 0.620436 8.1:+73814526 MS.gene95305:CDS
GCCGCTTCCTGTGTCAATCG+CGG 0.625354 8.1:+73814088 MS.gene95305:CDS
CAGGGATAAGGACAAGGACA+GGG 0.626401 8.1:+73814532 MS.gene95305:CDS
CAGAAGCAAAGACAAAGACA+AGG 0.629036 8.1:+73814586 MS.gene95305:CDS
CGACTTGGATATACTCAAGG+AGG 0.629284 8.1:+73814235 MS.gene95305:CDS
AACAACATGCACAACGAAGT+AGG 0.631543 8.1:-73818576 None:intergenic
TCTCAAGAGAGACAAGTGCT+CGG 0.651092 8.1:+73814201 MS.gene95305:CDS
CGACACCAGAGGGCGTCGTG+AGG 0.651159 8.1:-73818650 None:intergenic
TTGAGTATATCCAAGTCGAA+AGG 0.652260 8.1:-73814230 None:intergenic
TTTCAGAAGAGGAAGCATGA+CGG 0.652327 8.1:+73815154 MS.gene95305:intron
TCGTGAGGCACGACACCAGA+GGG 0.656255 8.1:-73818660 None:intergenic
GTCGTGAGGCACGACACCAG+AGG 0.657324 8.1:-73818661 None:intergenic
ATTTGTTGCAGAGTAGCTAG+GGG 0.663269 8.1:+73817400 MS.gene95305:intron
ATGGTGAATTCACCTGATGG+TGG 0.663661 8.1:+73817445 MS.gene95305:CDS
CTCAAGAATTGATGAGTTGG+GGG 0.664098 8.1:+73815372 MS.gene95305:CDS
GTGAGGCACGACACCAGAGT+AGG 0.674829 8.1:-73818633 None:intergenic
CAGAGTGTATCGCTAAGAGG+AGG 0.680858 8.1:-73818685 None:intergenic
ACTCACACACCAGTGTCAGG+AGG 0.683821 8.1:-73816778 None:intergenic
GAAGCACAAACATCGTCACA+AGG 0.684990 8.1:+73814562 MS.gene95305:CDS
ATGATGGTGAATTCACCTGA+TGG 0.706691 8.1:+73817442 MS.gene95305:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATTATAATAATTTGG+GGG - chr8.1:73817183-73817202 None:intergenic 10.0%
!! GAAATTATTATAATAATTTG+GGG - chr8.1:73817184-73817203 None:intergenic 10.0%
!! GTGAAATTATTATAATAATT+TGG - chr8.1:73817186-73817205 None:intergenic 10.0%
!!! AATAAAGATTTTATAGAATT+AGG - chr8.1:73813612-73813631 None:intergenic 10.0%
!! AAAAGAAAAAAAATCAATCA+GGG - chr8.1:73816063-73816082 None:intergenic 15.0%
!! AATTATTATAATAATTTGGG+GGG - chr8.1:73817182-73817201 None:intergenic 15.0%
!! AGAGAAAAAATTAAAAATTG+TGG - chr8.1:73815531-73815550 None:intergenic 15.0%
!! CAACAAATAAAAAAAACAAT+TGG - chr8.1:73817388-73817407 None:intergenic 15.0%
!! GTACTTTATAATTTACTTAA+GGG + chr8.1:73817640-73817659 MS.gene95305:intron 15.0%
!! TAAAAATATTGAAGTTAAGA+TGG + chr8.1:73818063-73818082 MS.gene95305:intron 15.0%
!! TAAAAGAAAAAAAATCAATC+AGG - chr8.1:73816064-73816083 None:intergenic 15.0%
!! TCAATTCCAAAAAAATTAAT+GGG - chr8.1:73813806-73813825 None:intergenic 15.0%
!! TCAATTTCAAATTTAATTGT+CGG + chr8.1:73815906-73815925 MS.gene95305:intron 15.0%
!! TGTACTTTATAATTTACTTA+AGG + chr8.1:73817639-73817658 MS.gene95305:intron 15.0%
!! TTCAATTCCAAAAAAATTAA+TGG - chr8.1:73813807-73813826 None:intergenic 15.0%
!!! AAAACTAAGAATTTTATTCA+TGG + chr8.1:73817304-73817323 MS.gene95305:intron 15.0%
!!! TTAATTTTTTTGGAATTGAA+TGG + chr8.1:73813807-73813826 MS.gene95305:intron 15.0%
!!! TTTTTTCTTTATTGAAATGA+GGG + chr8.1:73817956-73817975 MS.gene95305:intron 15.0%
!!! TTTTTTTCTTTATTGAAATG+AGG + chr8.1:73817955-73817974 MS.gene95305:intron 15.0%
!! AAATTTCATAGCATATAGTT+TGG - chr8.1:73817995-73818014 None:intergenic 20.0%
!! AATGTTGCCAATAAATAAAA+GGG + chr8.1:73816220-73816239 MS.gene95305:intron 20.0%
!! AATTTATCACAGCATAATAA+GGG - chr8.1:73817138-73817157 None:intergenic 20.0%
!! AATTTCAAATTTAATTGTCG+GGG + chr8.1:73815908-73815927 MS.gene95305:intron 20.0%
!! CAATTTCAAATTTAATTGTC+GGG + chr8.1:73815907-73815926 MS.gene95305:intron 20.0%
!! TAATTTATCACAGCATAATA+AGG - chr8.1:73817139-73817158 None:intergenic 20.0%
!! TATTATAATAATTTCACCCT+GGG + chr8.1:73817189-73817208 MS.gene95305:intron 20.0%
!! TATTGGTAAAATTCAACAAA+TGG + chr8.1:73818040-73818059 MS.gene95305:intron 20.0%
!! TTATGAAATAACAGTTATAG+CGG + chr8.1:73814972-73814991 MS.gene95305:intron 20.0%
!! TTATGAGCAATATAAAATGT+TGG + chr8.1:73816928-73816947 MS.gene95305:intron 20.0%
!! TTATTATAATAATTTCACCC+TGG + chr8.1:73817188-73817207 MS.gene95305:intron 20.0%
!! TTGCAAATAAAAGCAATTAA+GGG - chr8.1:73815603-73815622 None:intergenic 20.0%
!! TTTGCAAATAAAAGCAATTA+AGG - chr8.1:73815604-73815623 None:intergenic 20.0%
!!! ATTTTTTCCTTCAGAAATAT+GGG + chr8.1:73817902-73817921 MS.gene95305:intron 20.0%
!!! CATAATATTTTGTGCTAAAT+AGG - chr8.1:73814957-73814976 None:intergenic 20.0%
!!! GCATATTTTTTAACATAGTA+GGG + chr8.1:73818306-73818325 MS.gene95305:intron 20.0%
!!! GGTTAATTTGTAAACTATAT+GGG + chr8.1:73817790-73817809 MS.gene95305:intron 20.0%
!!! TATTGTGCAAACTTTAAAAA+GGG - chr8.1:73813899-73813918 None:intergenic 20.0%
!!! TGGTTAATTTGTAAACTATA+TGG + chr8.1:73817789-73817808 MS.gene95305:intron 20.0%
!!! TTATCACCCATTAATTTTTT+TGG + chr8.1:73813797-73813816 MS.gene95305:intron 20.0%
!!! TTTTTCTTTATTGAAATGAG+GGG + chr8.1:73817957-73817976 MS.gene95305:intron 20.0%
! AAAAGTCAAAAACTGAGAAT+TGG - chr8.1:73818143-73818162 None:intergenic 25.0%
! AAAATAGATTGCAAAACTTC+CGG - chr8.1:73817094-73817113 None:intergenic 25.0%
! AAAGTCAAAAACTGAGAATT+GGG - chr8.1:73818142-73818161 None:intergenic 25.0%
! AAGTAGACTTTCGAAAATAT+CGG + chr8.1:73817877-73817896 MS.gene95305:intron 25.0%
! AATTTGTAAACTATATGGGA+CGG + chr8.1:73817794-73817813 MS.gene95305:intron 25.0%
! ACTAAGATAAATATGAAGGA+TGG - chr8.1:73818172-73818191 None:intergenic 25.0%
! AGAAAATAATAGAGCTTTAC+CGG + chr8.1:73816606-73816625 MS.gene95305:intron 25.0%
! AGAAAATATTGTGAGAGAAA+GGG + chr8.1:73816501-73816520 MS.gene95305:intron 25.0%
! AGATATTGAGCAAAAGTAAA+AGG - chr8.1:73815135-73815154 None:intergenic 25.0%
! AGGATAACTGAAATAACTAT+TGG + chr8.1:73817696-73817715 MS.gene95305:intron 25.0%
! ATAACTGAAATAACTATTGG+GGG + chr8.1:73817699-73817718 MS.gene95305:intron 25.0%
! ATACAGAATGTCAAAAAACA+CGG - chr8.1:73813975-73813994 None:intergenic 25.0%
! ATATATAAGAGGGATTTAGA+GGG + chr8.1:73816870-73816889 MS.gene95305:intron 25.0%
! ATATCAGTGATGTTAAATAG+TGG + chr8.1:73814876-73814895 MS.gene95305:intron 25.0%
! ATCATGATAATCTTATAGTC+AGG - chr8.1:73817427-73817446 None:intergenic 25.0%
! ATTATGCTGTGATAAATTAC+CGG + chr8.1:73817140-73817159 MS.gene95305:intron 25.0%
! CGAAGTTAAATAAATGGTAT+GGG - chr8.1:73817752-73817771 None:intergenic 25.0%
! CTAAGATAAATATGAAGGAT+GGG - chr8.1:73818171-73818190 None:intergenic 25.0%
! GAAGAAAAGTAAATTCCAAA+AGG - chr8.1:73818221-73818240 None:intergenic 25.0%
! GAATGTTGCCAATAAATAAA+AGG + chr8.1:73816219-73816238 MS.gene95305:intron 25.0%
! GATAACTGAAATAACTATTG+GGG + chr8.1:73817698-73817717 MS.gene95305:intron 25.0%
! GGATAACTGAAATAACTATT+GGG + chr8.1:73817697-73817716 MS.gene95305:intron 25.0%
! GTTATCTAATTGACAATACT+TGG + chr8.1:73813702-73813721 MS.gene95305:intron 25.0%
! TAAGATAAATATGAAGGATG+GGG - chr8.1:73818170-73818189 None:intergenic 25.0%
! TAATTCTTGCTGAAATCATT+CGG + chr8.1:73814338-73814357 MS.gene95305:intron 25.0%
! TATATATAAGAGGGATTTAG+AGG + chr8.1:73816869-73816888 MS.gene95305:intron 25.0%
! TCGAAGTTAAATAAATGGTA+TGG - chr8.1:73817753-73817772 None:intergenic 25.0%
! TCTTATAACTAGGAATCAAA+CGG - chr8.1:73815643-73815662 None:intergenic 25.0%
! TGACTATAAGATTATCATGA+TGG + chr8.1:73817426-73817445 MS.gene95305:CDS 25.0%
! TGATAAATATGTGAATGCAA+TGG + chr8.1:73816413-73816432 MS.gene95305:intron 25.0%
!! AGTTTTGCAATCTATTTTGT+AGG + chr8.1:73817096-73817115 MS.gene95305:intron 25.0%
!! ATGTAGATAACAATTTTTCC+TGG + chr8.1:73815681-73815700 MS.gene95305:intron 25.0%
!! ATTGTGCAAACTTTAAAAAG+GGG - chr8.1:73813898-73813917 None:intergenic 25.0%
!! ATTTTACCAATAGAGTGAAA+TGG - chr8.1:73818032-73818051 None:intergenic 25.0%
!! ATTTTTCATGAATCTCAAAC+TGG + chr8.1:73817242-73817261 MS.gene95305:intron 25.0%
!! CTTGTCATTTAAGAGAATTA+AGG + chr8.1:73816897-73816916 MS.gene95305:intron 25.0%
!! GTATTGTGCAAACTTTAAAA+AGG - chr8.1:73813900-73813919 None:intergenic 25.0%
!! TACCATTTATTTAACTTCGA+CGG + chr8.1:73817753-73817772 MS.gene95305:intron 25.0%
!! TTATTTTCTTCAGTAACTCA+AGG - chr8.1:73816595-73816614 None:intergenic 25.0%
!! TTTTACCAATAGAGTGAAAT+GGG - chr8.1:73818031-73818050 None:intergenic 25.0%
!!! CGCATATTTTTTAACATAGT+AGG + chr8.1:73818305-73818324 MS.gene95305:intron 25.0%
!!! CTATGTACTTCATTCTTTTT+TGG + chr8.1:73815562-73815581 MS.gene95305:intron 25.0%
!!! GATTTTTTCCTTCAGAAATA+TGG + chr8.1:73817901-73817920 MS.gene95305:intron 25.0%
!!! GTATTTTTGAACAATTTGTG+CGG + chr8.1:73818276-73818295 MS.gene95305:intron 25.0%
!!! TATTTTTTAACATAGTAGGG+TGG + chr8.1:73818309-73818328 MS.gene95305:intron 25.0%
!!! TCTTTTTTGGAGTTTTAACA+GGG + chr8.1:73815575-73815594 MS.gene95305:intron 25.0%
!!! TTCTTTTTTGGAGTTTTAAC+AGG + chr8.1:73815574-73815593 MS.gene95305:intron 25.0%
!!! TTTTTTCCTTCAGAAATATG+GGG + chr8.1:73817903-73817922 MS.gene95305:intron 25.0%
AAGAATGAAGTACATAGTCA+TGG - chr8.1:73815559-73815578 None:intergenic 30.0%
AAGATAAATATGAAGGATGG+GGG - chr8.1:73818169-73818188 None:intergenic 30.0%
ACAAAAAGAAAGACAAAAGC+GGG + chr8.1:73814609-73814628 MS.gene95305:CDS 30.0%
ACGTGCAAAATTTATGCATT+TGG - chr8.1:73818248-73818267 None:intergenic 30.0%
AGTACTTGTAAACTCTGTTT+AGG + chr8.1:73814825-73814844 MS.gene95305:intron 30.0%
AGTTCACTAGCAATTCTATA+AGG - chr8.1:73817527-73817546 None:intergenic 30.0%
ATAGAATTGCTAGTGAACTT+TGG + chr8.1:73817528-73817547 MS.gene95305:intron 30.0%
ATCCGTCGAAGTTAAATAAA+TGG - chr8.1:73817758-73817777 None:intergenic 30.0%
ATTAAAATGATCTCCTTCAC+TGG - chr8.1:73814853-73814872 None:intergenic 30.0%
ATTCCCTTTGATTACATAAC+AGG - chr8.1:73816306-73816325 None:intergenic 30.0%
ATTGAATGTAACACAGCAAA+AGG - chr8.1:73818547-73818566 None:intergenic 30.0%
CAACCTGTTATGTAATCAAA+GGG + chr8.1:73816300-73816319 MS.gene95305:intron 30.0%
CAGAAAATATTGTGAGAGAA+AGG + chr8.1:73816500-73816519 MS.gene95305:intron 30.0%
CATTTGCTCTACATACTATT+TGG + chr8.1:73815077-73815096 MS.gene95305:intron 30.0%
CGTGCAAAATTTATGCATTT+GGG - chr8.1:73818247-73818266 None:intergenic 30.0%
CTCAAAGAAACATCATGAAA+AGG + chr8.1:73814655-73814674 MS.gene95305:CDS 30.0%
CTTATAACTAGGAATCAAAC+GGG - chr8.1:73815642-73815661 None:intergenic 30.0%
GACAAAAAGAAAGACAAAAG+CGG + chr8.1:73814608-73814627 MS.gene95305:CDS 30.0%
GGTTATTTACATAGCAAGTT+AGG + chr8.1:73816949-73816968 MS.gene95305:intron 30.0%
GTGCAAAATTTATGCATTTG+GGG - chr8.1:73818246-73818265 None:intergenic 30.0%
GTGCCATAAACATATGAAAT+CGG - chr8.1:73813671-73813690 None:intergenic 30.0%
TATATAAGAGGGATTTAGAG+GGG + chr8.1:73816871-73816890 MS.gene95305:intron 30.0%
TCAAGAAATCTGAAAATGTC+AGG - chr8.1:73815490-73815509 None:intergenic 30.0%
TCCATTGAGAAGAAAAACTT+TGG - chr8.1:73818111-73818130 None:intergenic 30.0%
TGCAAAATTTATGCATTTGG+GGG - chr8.1:73818245-73818264 None:intergenic 30.0%
TGCCATAAACATATGAAATC+GGG - chr8.1:73813670-73813689 None:intergenic 30.0%
TTAAAAGCAGTGTGATAAAG+TGG + chr8.1:73817273-73817292 MS.gene95305:intron 30.0%
TTCTGGTGTATATTTCTTAG+TGG + chr8.1:73815285-73815304 MS.gene95305:intron 30.0%
TTGCAGAAAAATTCATAGTG+CGG - chr8.1:73814065-73814084 None:intergenic 30.0%
! ACCAAAGTTTTTCTTCTCAA+TGG + chr8.1:73818107-73818126 MS.gene95305:intron 30.0%
! ACTATGAATTTTTCTGCAAG+AGG + chr8.1:73814066-73814085 MS.gene95305:CDS 30.0%
! ATTTATTTAACTTCGACGGA+TGG + chr8.1:73817757-73817776 MS.gene95305:intron 30.0%
! CAATCTATTTTGTAGGCAAA+AGG + chr8.1:73817103-73817122 MS.gene95305:intron 30.0%
! TATTGCTGTGTTTTGTAACT+TGG + chr8.1:73817048-73817067 MS.gene95305:intron 30.0%
! TGACATTTTCAGATTTCTTG+AGG + chr8.1:73815489-73815508 MS.gene95305:intron 30.0%
! TTCTCTCACAATATTTTCTG+TGG - chr8.1:73816500-73816519 None:intergenic 30.0%
! TTGTTGTCATTTGTATGTGA+AGG + chr8.1:73815455-73815474 MS.gene95305:intron 30.0%
!! GATCTAGAAGCTTTTTGTTT+AGG + chr8.1:73817676-73817695 MS.gene95305:intron 30.0%
!! GCAAACAAAATTGACTTTTG+AGG + chr8.1:73818378-73818397 MS.gene95305:intron 30.0%
!! GCTCAATCCCTTTTATTTAT+TGG - chr8.1:73816230-73816249 None:intergenic 30.0%
!! TTCTGTATTTTTGAATCCTC+AGG + chr8.1:73813987-73814006 MS.gene95305:intron 30.0%
!! TTTGATTTTCCTGCAATTGT+TGG - chr8.1:73814470-73814489 None:intergenic 30.0%
!! TTTTGCTGTGTTACATTCAA+TGG + chr8.1:73818546-73818565 MS.gene95305:CDS 30.0%
!!! TAGTTTTTTATTTGCCCTTC+TGG + chr8.1:73813754-73813773 MS.gene95305:intron 30.0%
AAAATCAATCAGGGTCTGAA+AGG - chr8.1:73816054-73816073 None:intergenic 35.0%
AAAGGAATACCAACAATTGC+AGG + chr8.1:73814458-73814477 MS.gene95305:CDS 35.0%
AAAGTTTCAAATCTGCCAGA+AGG - chr8.1:73813772-73813791 None:intergenic 35.0%
AAATATTGTGAGAGAAAGGG+AGG + chr8.1:73816504-73816523 MS.gene95305:intron 35.0%
AAGTTTCAAATCTGCCAGAA+GGG - chr8.1:73813771-73813790 None:intergenic 35.0%
AATAAAAGGGATTGAGCATG+AGG + chr8.1:73816233-73816252 MS.gene95305:intron 35.0%
AATATACACCAGAAATGTGC+TGG - chr8.1:73815279-73815298 None:intergenic 35.0%
ACAGAAGTAAGAAAAGGAGA+TGG + chr8.1:73814143-73814162 MS.gene95305:CDS 35.0%
ACTACACAATTTCTTACAGC+AGG - chr8.1:73814296-73814315 None:intergenic 35.0%
AGACAGTCTGAACATTAACA+AGG - chr8.1:73816708-73816727 None:intergenic 35.0%
AGCTCAAGAATTGATGAGTT+GGG + chr8.1:73815370-73815389 MS.gene95305:CDS 35.0%
AGTTAGTTAGCAAGTGAGTT+AGG + chr8.1:73816175-73816194 MS.gene95305:intron 35.0%
ATAAAAGGGATTGAGCATGA+GGG + chr8.1:73816234-73816253 MS.gene95305:intron 35.0%
ATAATGCAGAGACTGAAACA+TGG - chr8.1:73817016-73817035 None:intergenic 35.0%
ATATACACCAGAAATGTGCT+GGG - chr8.1:73815278-73815297 None:intergenic 35.0%
ATATCGAACAGTGTTGTCAA+TGG - chr8.1:73815054-73815073 None:intergenic 35.0%
ATATGTGAATGCAATGGTTG+TGG + chr8.1:73816419-73816438 MS.gene95305:intron 35.0%
ATTGTAAGACAAATCTACCC+TGG + chr8.1:73815978-73815997 MS.gene95305:intron 35.0%
CAAATGACAACAACCAATTG+AGG - chr8.1:73815448-73815467 None:intergenic 35.0%
CAGTATGGATCTTGCAATTA+TGG - chr8.1:73818469-73818488 None:intergenic 35.0%
GACAGTCTGAACATTAACAA+GGG - chr8.1:73816707-73816726 None:intergenic 35.0%
GATCCTGAAGGAAAAAAGTT+TGG + chr8.1:73813545-73813564 MS.gene95305:CDS 35.0%
GCAACCTGTTATGTAATCAA+AGG + chr8.1:73816299-73816318 MS.gene95305:intron 35.0%
GCACAAACACAAAAAGAGTA+AGG + chr8.1:73815198-73815217 MS.gene95305:CDS 35.0%
GCTATAGCGTTATTGCATAA+TGG + chr8.1:73814900-73814919 MS.gene95305:intron 35.0%
GCTGCTAATAAATAGCGTAT+TGG - chr8.1:73815804-73815823 None:intergenic 35.0%
GGAGACAATTAGGAGAAATA+AGG + chr8.1:73816197-73816216 MS.gene95305:intron 35.0%
GGGCACTAAGATAAATATGA+AGG - chr8.1:73818176-73818195 None:intergenic 35.0%
GGTTCAATCTGTTGACATAA+TGG + chr8.1:73816564-73816583 MS.gene95305:intron 35.0%
GTCCCGATTTCATATGTTTA+TGG + chr8.1:73813665-73813684 MS.gene95305:intron 35.0%
GTTAGTTAGCAAGTGAGTTA+GGG + chr8.1:73816176-73816195 MS.gene95305:intron 35.0%
TATCAACCGACATTGTATCA+CGG - chr8.1:73816349-73816368 None:intergenic 35.0%
TCTATCCCATTTCACTCTAT+TGG + chr8.1:73818023-73818042 MS.gene95305:intron 35.0%
TCTTTATTGAAATGAGGGGT+GGG + chr8.1:73817961-73817980 MS.gene95305:intron 35.0%
TGATAGAATGAGAGAAGATG+AGG - chr8.1:73816985-73817004 None:intergenic 35.0%
TGCTCAATATCTTTCAGAAG+AGG + chr8.1:73815143-73815162 MS.gene95305:intron 35.0%
TTATCACTTACAGAAGAGTC+CGG - chr8.1:73816628-73816647 None:intergenic 35.0%
TTCTTTATTGAAATGAGGGG+TGG + chr8.1:73817960-73817979 MS.gene95305:intron 35.0%
TTGAGTATATCCAAGTCGAA+AGG - chr8.1:73814233-73814252 None:intergenic 35.0%
TTGCAATGTTATTGCATGAC+AGG - chr8.1:73814744-73814763 None:intergenic 35.0%
TTGTAACTTGGATTTGTCAG+AGG + chr8.1:73817060-73817079 MS.gene95305:intron 35.0%
! AAGAAGTTTTTGTCGTACTG+AGG + chr8.1:73816808-73816827 MS.gene95305:intron 35.0%
! ACTTGCTAACTAACTACCTA+GGG - chr8.1:73816170-73816189 None:intergenic 35.0%
! ATGCATAAATTTTGCACGTC+TGG + chr8.1:73818249-73818268 MS.gene95305:intron 35.0%
! GTAAATTCCAAAAGGAGCAT+AGG - chr8.1:73818213-73818232 None:intergenic 35.0%
! GTTCCTTGATTTTCCCTAAT+AGG + chr8.1:73814430-73814449 MS.gene95305:intron 35.0%
! TATTTGTTGCAGAGTAGCTA+GGG + chr8.1:73817399-73817418 MS.gene95305:intron 35.0%
! TTATTTGTTGCAGAGTAGCT+AGG + chr8.1:73817398-73817417 MS.gene95305:intron 35.0%
! TTCACTCTCTTTTCCTCAAT+TGG + chr8.1:73815432-73815451 MS.gene95305:intron 35.0%
! TTTGTGCTAAATAGGTATCG+CGG - chr8.1:73814949-73814968 None:intergenic 35.0%
! TTTTTAACATAGTAGGGTGG+AGG + chr8.1:73818312-73818331 MS.gene95305:intron 35.0%
!! CATAGGAACAAGAGTATTCT+GGG - chr8.1:73818196-73818215 None:intergenic 35.0%
!! GTTTGATGATGTGTTCTTTG+TGG + chr8.1:73814390-73814409 MS.gene95305:intron 35.0%
!! TTTCGACTTGGATATACTCA+AGG + chr8.1:73814232-73814251 MS.gene95305:CDS 35.0%
AAAAGGAGATGGCATGCAAT+TGG + chr8.1:73814154-73814173 MS.gene95305:CDS 40.0%
AACAACATGCACAACGAAGT+AGG - chr8.1:73818579-73818598 None:intergenic 40.0%
AACAGGTTGCAGAACTTTGA+GGG - chr8.1:73816289-73816308 None:intergenic 40.0%
AGAGTAACTCTGGATGACAT+AGG + chr8.1:73816472-73816491 MS.gene95305:CDS 40.0%
AGTGAGTTAGGGAGACAATT+AGG + chr8.1:73816187-73816206 MS.gene95305:intron 40.0%
ATATCCAGTGCTCCAAAAAC+TGG - chr8.1:73817565-73817584 None:intergenic 40.0%
ATCCCTCTTATATATAGCCG+AGG - chr8.1:73816865-73816884 None:intergenic 40.0%
ATTCCTTTCTCCGCCTATTA+GGG - chr8.1:73814446-73814465 None:intergenic 40.0%
CAAATTTAATTGTCGGGGAG+TGG + chr8.1:73815913-73815932 MS.gene95305:intron 40.0%
CACCAAGGAGAAAAATGAGA+GGG - chr8.1:73816141-73816160 None:intergenic 40.0%
CAGAAGCAAAGACAAAGACA+AGG + chr8.1:73814586-73814605 MS.gene95305:CDS 40.0%
CCTGAAGGAAAAAAGTTTGG+AGG + chr8.1:73813548-73813567 MS.gene95305:CDS 40.0%
CTTGCTAACTAACTACCTAG+GGG - chr8.1:73816169-73816188 None:intergenic 40.0%
GAAGGAAAAAAGTTTGGAGG+AGG + chr8.1:73813551-73813570 MS.gene95305:CDS 40.0%
GAGCTCAAGAATTGATGAGT+TGG + chr8.1:73815369-73815388 MS.gene95305:CDS 40.0%
GCACACAACTACACTGATAA+TGG - chr8.1:73816111-73816130 None:intergenic 40.0%
GCTCAAGAATTGATGAGTTG+GGG + chr8.1:73815371-73815390 MS.gene95305:CDS 40.0%
GCTGTAGCACTATAGCTAAA+CGG + chr8.1:73815753-73815772 MS.gene95305:intron 40.0%
GCTGTCTGACTCTTATAACT+AGG - chr8.1:73815653-73815672 None:intergenic 40.0%
GGACTATCTTCTACAGCATT+TGG + chr8.1:73816543-73816562 MS.gene95305:intron 40.0%
GGAGACACAGAAGTAAGAAA+AGG + chr8.1:73814137-73814156 MS.gene95305:CDS 40.0%
GTGAATCCGTGATACAATGT+CGG + chr8.1:73816340-73816359 MS.gene95305:intron 40.0%
TAAAAGGGATTGAGCATGAG+GGG + chr8.1:73816235-73816254 MS.gene95305:intron 40.0%
TAACAGGTTGCAGAACTTTG+AGG - chr8.1:73816290-73816309 None:intergenic 40.0%
TATCCAGTGCTCCAAAAACT+GGG - chr8.1:73817564-73817583 None:intergenic 40.0%
TATTCCTTTCTCCGCCTATT+AGG - chr8.1:73814447-73814466 None:intergenic 40.0%
TCTATAGCACTATTGCGTTG+TGG + chr8.1:73814996-73815015 MS.gene95305:intron 40.0%
TGAAAGAATGCATCTTGCCT+CGG + chr8.1:73816845-73816864 MS.gene95305:intron 40.0%
TGCCTCGGCTATATATAAGA+GGG + chr8.1:73816860-73816879 MS.gene95305:intron 40.0%
TGGATCTTGCAATTATGGAG+AGG - chr8.1:73818464-73818483 None:intergenic 40.0%
TGGATTGATTGCATGAGTTG+TGG - chr8.1:73816750-73816769 None:intergenic 40.0%
TTCCTTCAGAAATATGGGGT+TGG + chr8.1:73817907-73817926 MS.gene95305:intron 40.0%
TTCTCGAATAGTGGCTATTG+CGG + chr8.1:73815729-73815748 MS.gene95305:intron 40.0%
TTGAACAATTTGTGCGGTCT+GGG + chr8.1:73818282-73818301 MS.gene95305:intron 40.0%
TTGCCTCGGCTATATATAAG+AGG + chr8.1:73816859-73816878 MS.gene95305:intron 40.0%
TTGTTGCACTGTCTTGCAAT+AGG + chr8.1:73818594-73818613 MS.gene95305:CDS 40.0%
TTTCTTCAGTAACTCAAGGC+AGG - chr8.1:73816591-73816610 None:intergenic 40.0%
TTTCTTTGAGTGATCAGCAC+TGG - chr8.1:73814645-73814664 None:intergenic 40.0%
TTTGAACAATTTGTGCGGTC+TGG + chr8.1:73818281-73818300 MS.gene95305:intron 40.0%
! AGCATAAGAAGCACAAAGAC+AGG + chr8.1:73814513-73814532 MS.gene95305:CDS 40.0%
! AGTCCATTCTTTTGTCTTCG+GGG + chr8.1:73818350-73818369 MS.gene95305:intron 40.0%
! ATGATGGTGAATTCACCTGA+TGG + chr8.1:73817442-73817461 MS.gene95305:CDS 40.0%
! ATTTGTTGCAGAGTAGCTAG+GGG + chr8.1:73817400-73817419 MS.gene95305:intron 40.0%
! CACTTGCTAACTAACTACCT+AGG - chr8.1:73816171-73816190 None:intergenic 40.0%
! CCTTGATTTTCCCTAATAGG+CGG + chr8.1:73814433-73814452 MS.gene95305:intron 40.0%
! CTCAAGAATTGATGAGTTGG+GGG + chr8.1:73815372-73815391 MS.gene95305:CDS 40.0%
! GAACATTAACAAGGGCACAT+GGG - chr8.1:73816699-73816718 None:intergenic 40.0%
! GAGTCCATTCTTTTGTCTTC+GGG + chr8.1:73818349-73818368 MS.gene95305:intron 40.0%
! GCATAAGAAGCACAAAGACA+GGG + chr8.1:73814514-73814533 MS.gene95305:CDS 40.0%
! GGAGTCCATTCTTTTGTCTT+CGG + chr8.1:73818348-73818367 MS.gene95305:intron 40.0%
! GTCTTCCTTTTCCCAGTTTT+TGG + chr8.1:73817550-73817569 MS.gene95305:intron 40.0%
! TCTTGTTCCTATGCTCCTTT+TGG + chr8.1:73818203-73818222 MS.gene95305:intron 40.0%
! TGAACATTAACAAGGGCACA+TGG - chr8.1:73816700-73816719 None:intergenic 40.0%
! TGTCGTACTGAGGAACATTT+TGG + chr8.1:73816818-73816837 MS.gene95305:intron 40.0%
! TTCCAACCCCATATTTCTGA+AGG - chr8.1:73817912-73817931 None:intergenic 40.0%
! TTTCAGAAGAGGAAGCATGA+CGG + chr8.1:73815154-73815173 MS.gene95305:intron 40.0%
!! AATTCACCTGATGGTGGAAA+AGG + chr8.1:73817451-73817470 MS.gene95305:CDS 40.0%
!! ACTTTGGTTTGCAAAAGAGC+TGG - chr8.1:73818095-73818114 None:intergenic 40.0%
!! AGAGATTTGTTGCTCAATCC+AGG - chr8.1:73815702-73815721 None:intergenic 40.0%
!! CTCTCATTTTTCTCCTTGGT+GGG + chr8.1:73816140-73816159 MS.gene95305:intron 40.0%
!! GCATAGGAACAAGAGTATTC+TGG - chr8.1:73818197-73818216 None:intergenic 40.0%
!!! CCTCCAAACTTTTTTCCTTC+AGG - chr8.1:73813551-73813570 None:intergenic 40.0%
!!! TTTTTGTAGCTCTAACCTGC+TGG - chr8.1:73816662-73816681 None:intergenic 40.0%
AAAACTCCCAGTGATTCCCA+GGG - chr8.1:73817208-73817227 None:intergenic 45.0%
AATTTCACCCTGGGAATCAC+TGG + chr8.1:73817198-73817217 MS.gene95305:intron 45.0%
AGGAGAAAAATGAGAGGGTC+AGG - chr8.1:73816136-73816155 None:intergenic 45.0%
AGGGGGGAATCTATTCAGTA+TGG - chr8.1:73818484-73818503 None:intergenic 45.0%
ATAAGCCAAGTAAGTCCAGC+AGG + chr8.1:73816644-73816663 MS.gene95305:CDS 45.0%
ATAGTAGGGTGGAGGTTTGA+TGG + chr8.1:73818320-73818339 MS.gene95305:intron 45.0%
ATGGTGAATTCACCTGATGG+TGG + chr8.1:73817445-73817464 MS.gene95305:CDS 45.0%
ATTGTGAGAGAAAGGGAGGA+GGG + chr8.1:73816508-73816527 MS.gene95305:intron 45.0%
ATTTAATTGTCGGGGAGTGG+AGG + chr8.1:73815916-73815935 MS.gene95305:intron 45.0%
ATTTCACCCTGGGAATCACT+GGG + chr8.1:73817199-73817218 MS.gene95305:intron 45.0%
CAAAGACAGGGATAAGGACA+AGG + chr8.1:73814526-73814545 MS.gene95305:CDS 45.0%
CAAGGAGGCTTTCCAACTAA+GGG + chr8.1:73814250-73814269 MS.gene95305:CDS 45.0%
CAATTCTTGAGCTCTTGTGC+TGG - chr8.1:73815363-73815382 None:intergenic 45.0%
CCACCAAGGAGAAAAATGAG+AGG - chr8.1:73816142-73816161 None:intergenic 45.0%
CCGCCTATTAGGGAAAATCA+AGG - chr8.1:73814436-73814455 None:intergenic 45.0%
CTATTGAACAACAGCAGCCA+GGG - chr8.1:73815998-73816017 None:intergenic 45.0%
CTGCTGTTGTTCAATAGCCA+GGG + chr8.1:73816001-73816020 MS.gene95305:intron 45.0%
CTGTCTATCACCTCTAAACC+AGG + chr8.1:73816722-73816741 MS.gene95305:intron 45.0%
CTTACAGCAGGCAAATCGAT+GGG - chr8.1:73814284-73814303 None:intergenic 45.0%
CTTCCCCGAAGACAAAAGAA+TGG - chr8.1:73818356-73818375 None:intergenic 45.0%
GAAGCACAAACATCGTCACA+AGG + chr8.1:73814562-73814581 MS.gene95305:CDS 45.0%
GAAGCACAAAGACAGGGATA+AGG + chr8.1:73814520-73814539 MS.gene95305:CDS 45.0%
GGACAGAATTCCTGAAGCAT+CGG - chr8.1:73816445-73816464 None:intergenic 45.0%
GGTGGAGGTTTGATGGAAAA+TGG + chr8.1:73818327-73818346 MS.gene95305:intron 45.0%
GTGCTCCAAAAACTGGGAAA+AGG - chr8.1:73817558-73817577 None:intergenic 45.0%
TATTGTGAGAGAAAGGGAGG+AGG + chr8.1:73816507-73816526 MS.gene95305:intron 45.0%
TCAAGGAGGCTTTCCAACTA+AGG + chr8.1:73814249-73814268 MS.gene95305:CDS 45.0%
TCCAGAGTTACTCTAGTTGC+TGG - chr8.1:73816466-73816485 None:intergenic 45.0%
TCCAGCAACTAGAGTAACTC+TGG + chr8.1:73816462-73816481 MS.gene95305:CDS 45.0%
TCGAACAGTGTTGTCAATGG+CGG - chr8.1:73815051-73815070 None:intergenic 45.0%
TCGACGGATGGATCTGTATA+TGG + chr8.1:73817769-73817788 MS.gene95305:intron 45.0%
TCTAACCTGCTGGACTTACT+TGG - chr8.1:73816652-73816671 None:intergenic 45.0%
TCTCAAGAGAGACAAGTGCT+CGG + chr8.1:73814201-73814220 MS.gene95305:CDS 45.0%
TCTTACAGCAGGCAAATCGA+TGG - chr8.1:73814285-73814304 None:intergenic 45.0%
TGATGTAACTCCTCCTACTC+TGG + chr8.1:73818620-73818639 MS.gene95305:CDS 45.0%
TTTCCCTAATAGGCGGAGAA+AGG + chr8.1:73814440-73814459 MS.gene95305:intron 45.0%
TTTCTGTCCCAGCACATTTC+TGG + chr8.1:73815268-73815287 MS.gene95305:intron 45.0%
! CGACTTGGATATACTCAAGG+AGG + chr8.1:73814235-73814254 MS.gene95305:CDS 45.0%
! CTCTGTTTAGGATCCAGTGA+AGG + chr8.1:73814837-73814856 MS.gene95305:intron 45.0%
! TGATGAGTTGGGGGCAATAA+AGG + chr8.1:73815381-73815400 MS.gene95305:CDS 45.0%
! TTCTTTTGTCTTCGGGGAAG+TGG + chr8.1:73818356-73818375 MS.gene95305:intron 45.0%
! TTTGTCAGAGGTGCACAATC+CGG + chr8.1:73817072-73817091 MS.gene95305:intron 45.0%
! TTTTGAATCCTCAGGACCGA+GGG + chr8.1:73813995-73814014 MS.gene95305:intron 45.0%
! TTTTTGAATCCTCAGGACCG+AGG + chr8.1:73813994-73814013 MS.gene95305:intron 45.0%
!! CCTCTCATTTTTCTCCTTGG+TGG + chr8.1:73816139-73816158 MS.gene95305:intron 45.0%
!! GACCCTCTCATTTTTCTCCT+TGG + chr8.1:73816136-73816155 MS.gene95305:intron 45.0%
!! GTGTTTTGTCGTTTGAGAGG+AGG + chr8.1:73816257-73816276 MS.gene95305:intron 45.0%
!!! ACTACGACGTTTTGAAGCAG+AGG - chr8.1:73818520-73818539 None:intergenic 45.0%
!!! TTTCCCAGTTTTTGGAGCAC+TGG + chr8.1:73817558-73817577 MS.gene95305:intron 45.0%
!! TGAAATTATTATAATAATTT+GGG - chr8.1:73817185-73817204 None:intergenic 5.0%
ACACACTGAATCTGCAACCC+TGG - chr8.1:73816021-73816040 None:intergenic 50.0%
ACAGGGATAAGGACAAGGAC+AGG + chr8.1:73814531-73814550 MS.gene95305:CDS 50.0%
AGTTGTGGCTCCTGGTTTAG+AGG - chr8.1:73816735-73816754 None:intergenic 50.0%
ATCAGCATCAGAGCCGATCT+TGG + chr8.1:73816372-73816391 MS.gene95305:intron 50.0%
ATTGCATGAGTTGTGGCTCC+TGG - chr8.1:73816743-73816762 None:intergenic 50.0%
CACTACCTGCACAGTGTAGT+AGG + chr8.1:73814116-73814135 MS.gene95305:CDS 50.0%
CAGGGATAAGGACAAGGACA+GGG + chr8.1:73814532-73814551 MS.gene95305:CDS 50.0%
CTACCAGCGTTCTCGAATAG+TGG + chr8.1:73815720-73815739 MS.gene95305:intron 50.0%
GAAAACTCCCAGTGATTCCC+AGG - chr8.1:73817209-73817228 None:intergenic 50.0%
GCTATATCACTGTAGCGCAG+CGG + chr8.1:73815833-73815852 MS.gene95305:intron 50.0%
GCTATTGAACAACAGCAGCC+AGG - chr8.1:73815999-73816018 None:intergenic 50.0%
GCTGCTGTTGTTCAATAGCC+AGG + chr8.1:73816000-73816019 MS.gene95305:intron 50.0%
GGGAAAAGAGTGATACGAGC+CGG - chr8.1:73817162-73817181 None:intergenic 50.0%
TAGCCACTATTCGAGAACGC+TGG - chr8.1:73815726-73815745 None:intergenic 50.0%
TCGGATACAGCCTTTCGACT+TGG + chr8.1:73814220-73814239 MS.gene95305:CDS 50.0%
TGCATCCTACCCTCCAAGAT+CGG - chr8.1:73816388-73816407 None:intergenic 50.0%
TGTCTCCTACTACACTGTGC+AGG - chr8.1:73814124-73814143 None:intergenic 50.0%
TTGGGGGCAATAAAGGTTGC+TGG + chr8.1:73815388-73815407 MS.gene95305:intron 50.0%
! ACAAGGGCACATGGGTATCA+TGG - chr8.1:73816691-73816710 None:intergenic 50.0%
! CTGCTTCCTTTTCCACCATC+AGG - chr8.1:73817460-73817479 None:intergenic 50.0%
! TGGGAGCTGTTTCCCTTAGT+TGG - chr8.1:73814265-73814284 None:intergenic 50.0%
!! AGAGGTGGTGCTGCAAAAAG+GGG - chr8.1:73818502-73818521 None:intergenic 50.0%
!! CAGAGGTGGTGCTGCAAAAA+GGG - chr8.1:73818503-73818522 None:intergenic 50.0%
!! CTGATGGTGGAAAAGGAAGC+AGG + chr8.1:73817458-73817477 MS.gene95305:CDS 50.0%
!! GGGGTGTTTTGTCGTTTGAG+AGG + chr8.1:73816254-73816273 MS.gene95305:intron 50.0%
!!! ACGACGTTTTGAAGCAGAGG+TGG - chr8.1:73818517-73818536 None:intergenic 50.0%
AAACCTCCACCTCCTGACAC+TGG + chr8.1:73816769-73816788 MS.gene95305:CDS 55.0%
ACAGCACCTGTCAACTCCCT+CGG - chr8.1:73814014-73814033 None:intergenic 55.0%
ACTCACACACCAGTGTCAGG+AGG - chr8.1:73816781-73816800 None:intergenic 55.0%
AGCATCAGAGCCGATCTTGG+AGG + chr8.1:73816375-73816394 MS.gene95305:intron 55.0%
AGTGTCAGGAGGTGGAGGTT+TGG - chr8.1:73816770-73816789 None:intergenic 55.0%
ATGGTTGTGGCCGATGCTTC+AGG + chr8.1:73816432-73816451 MS.gene95305:intron 55.0%
GAGAGAAAGGGAGGAGGGAA+GGG + chr8.1:73816513-73816532 MS.gene95305:intron 55.0%
GCATCAGAGCCGATCTTGGA+GGG + chr8.1:73816376-73816395 MS.gene95305:intron 55.0%
GGAGGAGGGAAGGGTAGTAA+TGG + chr8.1:73816522-73816541 MS.gene95305:intron 55.0%
GGAGTGGAGGAAGAGGGAAT+TGG + chr8.1:73815929-73815948 MS.gene95305:intron 55.0%
TACCTAGGGGTAACCCACCA+AGG - chr8.1:73816156-73816175 None:intergenic 55.0%
TCCGCGATTGACACAGGAAG+CGG - chr8.1:73814092-73814111 None:intergenic 55.0%
TCCTGACACTGGTGTGTGAG+TGG + chr8.1:73816780-73816799 MS.gene95305:intron 55.0%
TGAGAGAAAGGGAGGAGGGA+AGG + chr8.1:73816512-73816531 MS.gene95305:intron 55.0%
TGTGTGTCCGCGATTGACAC+AGG - chr8.1:73814098-73814117 None:intergenic 55.0%
!! AGGTGGTGCTGCAAAAAGGG+GGG - chr8.1:73818500-73818519 None:intergenic 55.0%
!! GAGGTGGTGCTGCAAAAAGG+GGG - chr8.1:73818501-73818520 None:intergenic 55.0%
!! GCAGAGGTGGTGCTGCAAAA+AGG - chr8.1:73818504-73818523 None:intergenic 55.0%
!! GTGTTGTCAATGGCGGATCG+TGG - chr8.1:73815044-73815063 None:intergenic 55.0%
ACACCAGTGTCAGGAGGTGG+AGG - chr8.1:73816775-73816794 None:intergenic 60.0%
AGGCACGACACCAGAGTAGG+AGG - chr8.1:73818633-73818652 None:intergenic 60.0%
CACACACCAGTGTCAGGAGG+TGG - chr8.1:73816778-73816797 None:intergenic 60.0%
CAGAGCCGATCTTGGAGGGT+AGG + chr8.1:73816380-73816399 MS.gene95305:intron 60.0%
GCCACTCACACACCAGTGTC+AGG - chr8.1:73816784-73816803 None:intergenic 60.0%
GCCGCTTCCTGTGTCAATCG+CGG + chr8.1:73814088-73814107 MS.gene95305:CDS 60.0%
GTGAGGCACGACACCAGAGT+AGG - chr8.1:73818636-73818655 None:intergenic 60.0%
TCAGGACCGAGGGAGTTGAC+AGG + chr8.1:73814005-73814024 MS.gene95305:intron 60.0%
TCGTGAGGCACGACACCAGA+GGG - chr8.1:73818638-73818657 None:intergenic 60.0%
TGTCAACTCCCTCGGTCCTG+AGG - chr8.1:73814006-73814025 None:intergenic 60.0%
TGTCGGGGAGTGGAGGAAGA+GGG + chr8.1:73815923-73815942 MS.gene95305:intron 60.0%
TTGTCGGGGAGTGGAGGAAG+AGG + chr8.1:73815922-73815941 MS.gene95305:intron 60.0%
! GAGGGAGTTGACAGGTGCTG+TGG + chr8.1:73814013-73814032 MS.gene95305:CDS 60.0%
!! CTCCTTGGTGGGTTACCCCT+AGG + chr8.1:73816151-73816170 MS.gene95305:intron 60.0%
GTCGTGAGGCACGACACCAG+AGG - chr8.1:73818639-73818658 None:intergenic 65.0%
TCGTGCCTCACGACGCCCTC+TGG + chr8.1:73818645-73818664 MS.gene95305:CDS 70.0%
!! CGACACCAGAGGGCGTCGTG+AGG - chr8.1:73818653-73818672 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 73813542 73818695 73813542 ID=MS.gene95305
chr8.1 mRNA 73813542 73818695 73813542 ID=MS.gene95305.t1;Parent=MS.gene95305
chr8.1 exon 73813542 73813572 73813542 ID=MS.gene95305.t1.exon1;Parent=MS.gene95305.t1
chr8.1 CDS 73813542 73813572 73813542 ID=cds.MS.gene95305.t1;Parent=MS.gene95305.t1
chr8.1 exon 73814009 73814298 73814009 ID=MS.gene95305.t1.exon2;Parent=MS.gene95305.t1
chr8.1 CDS 73814009 73814298 73814009 ID=cds.MS.gene95305.t1;Parent=MS.gene95305.t1
chr8.1 exon 73814452 73814676 73814452 ID=MS.gene95305.t1.exon3;Parent=MS.gene95305.t1
chr8.1 CDS 73814452 73814676 73814452 ID=cds.MS.gene95305.t1;Parent=MS.gene95305.t1
chr8.1 exon 73815160 73815219 73815160 ID=MS.gene95305.t1.exon4;Parent=MS.gene95305.t1
chr8.1 CDS 73815160 73815219 73815160 ID=cds.MS.gene95305.t1;Parent=MS.gene95305.t1
chr8.1 exon 73815364 73815402 73815364 ID=MS.gene95305.t1.exon5;Parent=MS.gene95305.t1
chr8.1 CDS 73815364 73815402 73815364 ID=cds.MS.gene95305.t1;Parent=MS.gene95305.t1
chr8.1 exon 73816454 73816493 73816454 ID=MS.gene95305.t1.exon6;Parent=MS.gene95305.t1
chr8.1 CDS 73816454 73816493 73816454 ID=cds.MS.gene95305.t1;Parent=MS.gene95305.t1
chr8.1 exon 73816608 73816665 73816608 ID=MS.gene95305.t1.exon7;Parent=MS.gene95305.t1
chr8.1 CDS 73816608 73816665 73816608 ID=cds.MS.gene95305.t1;Parent=MS.gene95305.t1
chr8.1 exon 73816744 73816794 73816744 ID=MS.gene95305.t1.exon8;Parent=MS.gene95305.t1
chr8.1 CDS 73816744 73816794 73816744 ID=cds.MS.gene95305.t1;Parent=MS.gene95305.t1
chr8.1 exon 73817411 73817479 73817411 ID=MS.gene95305.t1.exon9;Parent=MS.gene95305.t1
chr8.1 CDS 73817411 73817479 73817411 ID=cds.MS.gene95305.t1;Parent=MS.gene95305.t1
chr8.1 exon 73818512 73818695 73818512 ID=MS.gene95305.t1.exon10;Parent=MS.gene95305.t1
chr8.1 CDS 73818512 73818695 73818512 ID=cds.MS.gene95305.t1;Parent=MS.gene95305.t1
Gene Sequence

>MS.gene95305

ATGGATCCTGAAGGAAAAAAGTTTGGAGGAGGTAAAAGTTTGTTACGATAGTGCTTTATGTTGTATACCTAATTCTATAAAATCTTTATTTGATGTCTCTGTATAGTATTATTGTATATACAAGTCCCGATTTCATATGTTTATGGCACGAACTGTGCTTGTTATCTAATTGACAATACTTGGTTAAATTTTTAATCAGTTATTCATGATCTTAGTTTTTTATTTGCCCTTCTGGCAGATTTGAAACTTTGTCAATTATCACCCATTAATTTTTTTGGAATTGAATGGAAAAGATTAAATTCTCTTAGCATCTTTTGAAGATTGAGTCATAGATAAAAATTACTGTGTAATCACCCCTTTTTAAAGTTTGCACAATACGTTTTCTTGTGTATATTTTATATTTCGTTTACACTTACTCATCAAAGAAAAACCGTGTTTTTTGACATTCTGTATTTTTGAATCCTCAGGACCGAGGGAGTTGACAGGTGCTGTGGATCTCATAAGTCATTTCAAATTAATACCGCACTATGAATTTTTCTGCAAGAGGCCGCTTCCTGTGTCAATCGCGGACACACACTACCTGCACAGTGTAGTAGGAGACACAGAAGTAAGAAAAGGAGATGGCATGCAATTGGACGAACTCATTCAGAATACATCTTTCTCAAGAGAGACAAGTGCTCGGATACAGCCTTTCGACTTGGATATACTCAAGGAGGCTTTCCAACTAAGGGAAACAGCTCCCATCGATTTGCCTGCTGTAAGAAATTGTGTAGTGATTTTGATCATACTTTGTTTTTAATTCTTGCTGAAATCATTCGGCATGCTATCTTAGTTTTTTTTTTAACAAAGTTTGATGATGTGTTCTTTGTGGACTTATATCTTTTGATTGTTCCTTGATTTTCCCTAATAGGCGGAGAAAGGAATACCAACAATTGCAGGAAAATCAAAAAGTGAGAAAGACAAAGAGAAGAAGCATAAGAAGCACAAAGACAGGGATAAGGACAAGGACAGGGAGCATAAGAAGCACAAACATCGTCACAAGGACAGAAGCAAAGACAAAGACAAGGACAAAAAGAAAGACAAAAGCGGGCATCGTGATTCCAGTGCTGATCACTCAAAGAAACATCATGAAAAGGTTGAATTTTTTTAGTTTTCTGCATCTATATTCTTCAGATTGAGAGAAAGTGTGTTCTGAAAATCCTGTCATGCAATAACATTGCAAATTTACTTGACTGTTTTTTTATGATTTTTAATTAGTGTCGTGCTGATACTGTTAACTCTCAAGTACTTGTAAACTCTGTTTAGGATCCAGTGAAGGAGATCATTTTAATTTGATATCAGTGATGTTAAATAGTGGCGCTATAGCGTTATTGCATAATGGAATTTGAACAAATCACTATTGTTCCGCGATACCTATTTAGCACAAAATATTATGAAATAACAGTTATAGCGGCTCTATAGCACTATTGCGTTGTGGAATTTGAACAAACATCTATTTTCCACGATCCGCCATTGACAACACTGTTCGATATCAACATTTGCTCTACATACTATTTGGACATGTTACAGACATTTAGTTCTATTAATTAACCTTTTACTTTTGCTCAATATCTTTCAGAAGAGGAAGCATGACGGAGATGATGATGCTAATGATGTGCACAAACACAAAAAGAGTAAGGTAATAAAGTAGTAAGAAGCTTAGTCTTGTGATGAGTTTTTTCTGTCTTTTCTGTCCCAGCACATTTCTGGTGTATATTTCTTAGTGGTTGACAGTGTCTAATCTTCAATGAACTTCTGTGCTCAATTTCTTAATTTTTTCCAGCACAAGAGCTCAAGAATTGATGAGTTGGGGGCAATAAAGGTTGCTGGCTGAAATAGTTATGTACTTAGTTCACTCTCTTTTCCTCAATTGGTTGTTGTCATTTGTATGTGAAGGAGACTTTTGCCTGACATTTTCAGATTTCTTGAGGTACATCATTATATCTGCCACAATTTTTAATTTTTTCTCTGATTTCCATGACTATGTACTTCATTCTTTTTTGGAGTTTTAACAGGGAACCCTTAATTGCTTTTATTTGCAAAAAATTGCATCAGTCACCCGTTTGATTCCTAGTTATAAGAGTCAGACAGCAACACACTATGTAGATAACAATTTTTCCTGGATTGAGCAACAAATCTCTACCAGCGTTCTCGAATAGTGGCTATTGCGGCGCTGTAGCACTATAGCTAAACGGAATTTAAACAAATCACTATTGTTTTCCAATACGCTATTTATTAGCAGCTATAACACTGCTATATCACTGTAGCGCAGCGGAATTCGAACACAACACTATTTTTCATAATTGACAACACTGATCTCTATTGTCAATTTCAAATTTAATTGTCGGGGAGTGGAGGAAGAGGGAATTGGAGATAGTTGTTTATCAAATATAATCAATTGTAAGACAAATCTACCCTGGCTGCTGTTGTTCAATAGCCAGGGTTGCAGATTCAGTGTGTGCTTTCATTTCCTTTCAGACCCTGATTGATTTTTTTTCTTTTACATCATAGCATCTTAAAATCTCTGCCATTATCAGTGTAGTTGTGTGCTTCCTGACCCTCTCATTTTTCTCCTTGGTGGGTTACCCCTAGGTAGTTAGTTAGCAAGTGAGTTAGGGAGACAATTAGGAGAAATAAGGAATGTTGCCAATAAATAAAAGGGATTGAGCATGAGGGGTGTTTTGTCGTTTGAGAGGAGGTGCAAACCCTCAAAGTTCTGCAACCTGTTATGTAATCAAAGGGAATTCTTCTCTATTTCTGTGAATCCGTGATACAATGTCGGTTGATATCAATCAGCATCAGAGCCGATCTTGGAGGGTAGGATGCAACTGATGATAAATATGTGAATGCAATGGTTGTGGCCGATGCTTCAGGAATTCTGTCCAGCAACTAGAGTAACTCTGGATGACATAGGTTCCACAGAAAATATTGTGAGAGAAAGGGAGGAGGGAAGGGTAGTAATGGACTATCTTCTACAGCATTTGGTTCAATCTGTTGACATAATGGACCTGCCTTGAGTTACTGAAGAAAATAATAGAGCTTTACCGGACTCTTCTGTAAGTGATAAGCCAAGTAAGTCCAGCAGGTTAGAGCTACAAAAACAAGTTCCATGATACCCATGTGCCCTTGTTAATGTTCAGACTGTCTATCACCTCTAAACCAGGAGCCACAACTCATGCAATCAATCCAAACCTCCACCTCCTGACACTGGTGTGTGAGTGGCGTAAAAGAAGTTTTTGTCGTACTGAGGAACATTTTGGCTACTGAAAGAATGCATCTTGCCTCGGCTATATATAAGAGGGATTTAGAGGGGTCTCTTGTCATTTAAGAGAATTAAGGTCTTTAGATTATGAGCAATATAAAATGTTGGTTATTTACATAGCAAGTTAGGAACTTGCTGTCCTCATCTTCTCTCATTCTATCAACTAAATTCCATGTTTCAGTCTCTGCATTATCTCTTGTACGTCTATTGCTGTGTTTTGTAACTTGGATTTGTCAGAGGTGCACAATCCGGAAGTTTTGCAATCTATTTTGTAGGCAAAAGGAATTGTTTGCCCTTATTATGCTGTGATAAATTACCGGCTCGTATCACTCTTTTCCCCCCAAATTATTATAATAATTTCACCCTGGGAATCACTGGGAGTTTTCTCATTTTGTGTTGATTTTTCATGAATCTCAAACTGGATATATTCTTAAAAGCAGTGTGATAAAGTGGAAAAAGAAAAAACTAAGAATTTTATTCATGGCTTAATATATGTTATATATACATAATACATAATACATAATAAAATATACTGATATCTTCCAATTGTTTTTTTTATTTGTTGCAGAGTAGCTAGGGGACCTGACTATAAGATTATCATGATGGTGAATTCACCTGATGGTGGAAAAGGAAGCAGGTAAAATATGATGAAGATAAACTATTCTTGTATAATAACAATTACCTTATAGAATTGCTAGTGAACTTTGGTCTTCCTTTTCCCAGTTTTTGGAGCACTGGATATATCTCAACATGTATGCATTGTTTTGACTTTTCTTCTTATATATAAAAAATATTCTGTACTTTATAATTTACTTAAGGGTTTGTTTAAACTAGATCTAGAAGCTTTTTGTTTAGGATAACTGAAATAACTATTGGGGGCTTGTGTGTGTATATCGATAGCTCTCTCCCATACCATTTATTTAACTTCGACGGATGGATCTGTATATGGTTAATTTGTAAACTATATGGGACGGAACTTTTCACCCCCTAATATTACTGACGGATGGAAAAAACGTGAATTTTATGTTGTTTTGAAGTAGACTTTCGAAAATATCGGTGATTTTTTCCTTCAGAAATATGGGGTTGGAAGTAGACTTTTGAAAATATCTGATTTTTTTTCTTTATTGAAATGAGGGGTGGGAAAATTTTCCAAACTATATGCTATGAAATTTAAATATAATCTATCCCATTTCACTCTATTGGTAAAATTCAACAAATGGTAAAAATATTGAAGTTAAGATGGCTACAACCAGCTCTTTTGCAAACCAAAGTTTTTCTTCTCAATGGACATTGCTACCCAATTCTCAGTTTTTGACTTTTACACCCCCATCCTTCATATTTATCTTAGTGCCCAGAATACTCTTGTTCCTATGCTCCTTTTGGAATTTACTTTTCTTCACCCCCAAATGCATAAATTTTGCACGTCTGGATGCGTATTTTTGAACAATTTGTGCGGTCTGGGCGCATATTTTTTAACATAGTAGGGTGGAGGTTTGATGGAAAATGGAGTCCATTCTTTTGTCTTCGGGGAAGTGGCAAACAAAATTGACTTTTGAGGTCAAATTTTTGTTTTTACTGCAAGAAACTTAGTTTTTGAAAAGCATACAAACACAGCATACCTCTCCATAATTGCAAGATCCATACTGAATAGATTCCCCCCTTTTTGCAGCACCACCTCTGCTTCAAAACGTCGTAGTTGCACCTTTTGCTGTGTTACATTCAATGGTGTAACTCCTACTTCGTTGTGCATGTTGTTGCACTGTCTTGCAATAGGCAATGATGTAACTCCTCCTACTCTGGTGTCGTGCCTCACGACGCCCTCTGGTGTCGTGCCTCACGACGCCTCCTCTTAG

Protein sequence

>MS.gene95305.t1

MDPEGKKFGGGPRELTGAVDLISHFKLIPHYEFFCKRPLPVSIADTHYLHSVVGDTEVRKGDGMQLDELIQNTSFSRETSARIQPFDLDILKEAFQLRETAPIDLPAAEKGIPTIAGKSKSEKDKEKKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHRDSSADHSKKHHEKKRKHDGDDDANDVHKHKKSKHKSSRIDELGAIKEFCPATRVTLDDIENNRALPDSSVSDKPSKSSRSHNSCNQSKPPPPDTGVVARGPDYKIIMMVNSPDGGKGSSTTSASKRRSCTFCCVTFNGVTPTSLCMLLHCLAIGNDVTPPTLVSCLTTPSGVVPHDASS