Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95477.t1 | XP_003614127.2 | 89.9 | 664 | 54 | 2 | 1 | 651 | 1 | 664 | 0.00E+00 | 1097.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95477.t1 | Q5UNY4 | 34.7 | 372 | 207 | 9 | 274 | 626 | 135 | 489 | 1.5e-54 | 215.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95477.t1 | G7JY31 | 89.9 | 664 | 54 | 2 | 1 | 651 | 1 | 664 | 0.0e+00 | 1097.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene95477 | -0.803629 | 3.18E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene95477 | -0.804534 | 2.06E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene95477 | 0.803953 | 2.73E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene95477 | -0.800076 | 1.71E-48 | -1.69E-46 |
| MS.gene050170 | MS.gene95477 | -0.818997 | 1.46E-52 | -1.69E-46 |
| MS.gene050381 | MS.gene95477 | 0.803698 | 3.08E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene95477 | -0.818834 | 1.59E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene95477 | -0.809642 | 1.71E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene95477 | -0.802611 | 5.17E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene95477 | -0.827093 | 1.89E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene95477 | -0.825844 | 3.76E-54 | -1.69E-46 |
| MS.gene05104 | MS.gene95477 | 0.827882 | 1.22E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene95477 | 0.805962 | 1.04E-49 | -1.69E-46 |
| MS.gene051694 | MS.gene95477 | -0.80928 | 2.05E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene95477 | -0.803396 | 3.56E-49 | -1.69E-46 |
| MS.gene05234 | MS.gene95477 | 0.816203 | 6.24E-52 | -1.69E-46 |
| MS.gene052606 | MS.gene95477 | 0.806061 | 9.88E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene95477 | -0.80062 | 1.32E-48 | -1.69E-46 |
| MS.gene053203 | MS.gene95477 | -0.811526 | 6.70E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene95477 | 0.81028 | 1.25E-50 | -1.69E-46 |
| MS.gene053421 | MS.gene95477 | 0.818037 | 2.42E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene95477 | -0.80307 | 4.16E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene95477 | -0.810743 | 9.90E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene95477 | -0.809292 | 2.03E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene95477 | -0.800054 | 1.73E-48 | -1.69E-46 |
| MS.gene054706 | MS.gene95477 | 0.845053 | 5.16E-59 | -1.69E-46 |
| MS.gene054707 | MS.gene95477 | 0.88357 | 4.01E-71 | -1.69E-46 |
| MS.gene054708 | MS.gene95477 | 0.855698 | 5.30E-62 | -1.69E-46 |
| MS.gene05470 | MS.gene95477 | -0.805228 | 1.48E-49 | -1.69E-46 |
| MS.gene055202 | MS.gene95477 | 0.81633 | 5.85E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene95477 | -0.813078 | 3.07E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene95477 | -0.819779 | 9.71E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene95477 | -0.812235 | 4.70E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene95477 | -0.826917 | 2.08E-54 | -1.69E-46 |
| MS.gene056313 | MS.gene95477 | 0.800658 | 1.30E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene95477 | -0.8415 | 4.58E-58 | -1.69E-46 |
| MS.gene057768 | MS.gene95477 | 0.810267 | 1.25E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene95477 | -0.823969 | 1.04E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene95477 | 0.805986 | 1.02E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene95477 | 0.808332 | 3.26E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene95477 | -0.837041 | 6.57E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene95477 | -0.802892 | 4.52E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene95477 | -0.801029 | 1.09E-48 | -1.69E-46 |
| MS.gene058603 | MS.gene95477 | 0.802821 | 4.68E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene95477 | -0.814229 | 1.71E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene95477 | -0.809868 | 1.53E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene95477 | -0.809484 | 1.85E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene95477 | -0.80354 | 3.32E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene95477 | -0.802199 | 6.28E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene95477 | 0.801067 | 1.07E-48 | -1.69E-46 |
| MS.gene060595 | MS.gene95477 | 0.809143 | 2.19E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene95477 | -0.832185 | 1.09E-55 | -1.69E-46 |
| MS.gene060778 | MS.gene95477 | -0.802786 | 4.76E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene95477 | -0.83613 | 1.12E-56 | -1.69E-46 |
| MS.gene060982 | MS.gene95477 | -0.804377 | 2.22E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95477.t1 | MTR_5g045160 | 88.490 | 669 | 54 | 4 | 1 | 651 | 1 | 664 | 0.0 | 1154 |
| MS.gene95477.t1 | MTR_6g445440 | 83.589 | 652 | 90 | 4 | 1 | 651 | 1 | 636 | 0.0 | 1091 |
| MS.gene95477.t1 | MTR_3g103410 | 70.654 | 719 | 126 | 5 | 3 | 651 | 4 | 707 | 0.0 | 1002 |
| MS.gene95477.t1 | MTR_5g045130 | 85.060 | 502 | 64 | 2 | 157 | 651 | 2 | 499 | 0.0 | 874 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95477.t1 | AT5G13210 | 59.178 | 681 | 240 | 6 | 1 | 651 | 1 | 673 | 0.0 | 814 |
| MS.gene95477.t1 | AT5G43400 | 56.828 | 681 | 238 | 9 | 1 | 651 | 1 | 655 | 0.0 | 769 |
| MS.gene95477.t1 | AT5G43390 | 55.769 | 676 | 236 | 9 | 2 | 651 | 5 | 643 | 0.0 | 738 |
| MS.gene95477.t1 | AT3G24780 | 58.155 | 607 | 199 | 5 | 55 | 616 | 107 | 703 | 0.0 | 727 |
Find 192 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGAGATTGTAGGGTCTT+TGG | 0.183762 | 5.2:-35424863 | MS.gene95477:CDS |
| TTAGGGTGGTGAGTGGATTT+TGG | 0.203979 | 5.2:+35425811 | None:intergenic |
| ATCATGAAGAAACTTGAAAT+TGG | 0.206773 | 5.2:+35425329 | None:intergenic |
| GTGTTAGTGGTGGTAGGGTT+AGG | 0.222334 | 5.2:+35426056 | None:intergenic |
| CATGAGATTGTAGGGTCTTT+GGG | 0.267979 | 5.2:-35424862 | MS.gene95477:CDS |
| GAATCTGCTGACATTGTTCT+TGG | 0.284328 | 5.2:-35424263 | MS.gene95477:CDS |
| AAATCAGTCTTGCTGCTAAA+TGG | 0.287484 | 5.2:-35425236 | MS.gene95477:CDS |
| TCAACCCCATCGATGGGTTT+TGG | 0.288529 | 5.2:+35425952 | None:intergenic |
| ACTAGGAAGTATAAAGAAAA+AGG | 0.291312 | 5.2:-35424394 | MS.gene95477:CDS |
| CCCTTCTTTGTCAGACTTAC+CGG | 0.294979 | 5.2:+35425755 | None:intergenic |
| GATGTGTCTGGGAGCATGTC+TGG | 0.302383 | 5.2:-35424742 | MS.gene95477:CDS |
| GTCTGTGGCATTGGGGTTGT+TGG | 0.311302 | 5.2:-35424704 | MS.gene95477:CDS |
| TTGCTTCCTCATGAGATTGT+AGG | 0.311780 | 5.2:-35424871 | MS.gene95477:CDS |
| GGTTCTACGCCGCTGCTCTA+TGG | 0.315868 | 5.2:-35425734 | MS.gene95477:CDS |
| GAATTGCCTGAGGTGTTTAT+TGG | 0.320710 | 5.2:-35425045 | MS.gene95477:CDS |
| ATGGAGGTGTCTGTGGCATT+GGG | 0.321729 | 5.2:-35424712 | MS.gene95477:CDS |
| TATGGAGGTGTCTGTGGCAT+TGG | 0.327031 | 5.2:-35424713 | MS.gene95477:CDS |
| CTTGCAGTGTGTGATGTGTC+TGG | 0.344032 | 5.2:-35424754 | MS.gene95477:CDS |
| GGGATTTGATTCCTTACAAT+AGG | 0.344162 | 5.2:-35425011 | MS.gene95477:CDS |
| ATATTGGATGTGGCTGTTAA+TGG | 0.351177 | 5.2:-35424520 | MS.gene95477:CDS |
| CCATGGTTCCTCACTCAATT+CGG | 0.357198 | 5.2:+35424678 | None:intergenic |
| AGAAGACGGTAGAGGATCTC+AGG | 0.360575 | 5.2:+35425636 | None:intergenic |
| TGTTAGTGGTGGTAGGGTTA+GGG | 0.364081 | 5.2:+35426057 | None:intergenic |
| ATCAAGCGTCTGCAAACTCT+TGG | 0.365158 | 5.2:-35424438 | MS.gene95477:CDS |
| AGGAGGCGCATTATGCTTAT+AGG | 0.369882 | 5.2:-35425119 | MS.gene95477:CDS |
| TGTTTATTGGTTCTAATCAA+TGG | 0.370352 | 5.2:-35425032 | MS.gene95477:CDS |
| GTCAGCGAGGGAAGGAATAT+TGG | 0.378142 | 5.2:+35425680 | None:intergenic |
| GTTGATGATTTGCTTAAGAA+AGG | 0.386144 | 5.2:-35424793 | MS.gene95477:CDS |
| GCAGCTTCCATGGCTTCTAC+AGG | 0.387857 | 5.2:+35424220 | None:intergenic |
| GGAGAGGTTTGAGAAGTACT+TGG | 0.389397 | 5.2:-35424935 | MS.gene95477:CDS |
| GTTTGTGAGGAACATGGATT+GGG | 0.401906 | 5.2:-35424578 | MS.gene95477:CDS |
| ATCGACTAAGACATCGTTAG+TGG | 0.402645 | 5.2:+35426010 | None:intergenic |
| GGATTTGATTCCTTACAATA+GGG | 0.403530 | 5.2:-35425010 | MS.gene95477:CDS |
| GGAGGCGCATTATGCTTATA+GGG | 0.411872 | 5.2:-35425118 | MS.gene95477:CDS |
| CTTTCTGAGTGGATGGCACC+GGG | 0.421088 | 5.2:+35424314 | None:intergenic |
| GTTTATTGGTTCTAATCAAT+GGG | 0.421188 | 5.2:-35425031 | MS.gene95477:CDS |
| GGTTTGAGCGGTGGTGTTAG+TGG | 0.421910 | 5.2:+35426043 | None:intergenic |
| GAGTGGAGGGAAAGGAAATC+TGG | 0.423211 | 5.2:-35425579 | MS.gene95477:CDS |
| AAATCAAAATCAAAATCAAA+AGG | 0.423267 | 5.2:+35425528 | None:intergenic |
| TGCTTCCTCATGAGATTGTA+GGG | 0.433384 | 5.2:-35424870 | MS.gene95477:CDS |
| GCCGGTGATGGCAGCTTCCA+TGG | 0.433686 | 5.2:+35424210 | None:intergenic |
| CCGTTGACTCTTCCTTTGAT+CGG | 0.435307 | 5.2:-35425206 | MS.gene95477:CDS |
| TCATGAAGAAACTTGAAATT+GGG | 0.436482 | 5.2:+35425330 | None:intergenic |
| ACAACTAGTTTCTGATACTC+AGG | 0.442507 | 5.2:+35424187 | None:intergenic |
| GCCATGGAAGCTGCCATCAC+CGG | 0.445245 | 5.2:-35424211 | MS.gene95477:CDS |
| GGTGGCCAACTTCAATTCTC+TGG | 0.445519 | 5.2:-35425982 | MS.gene95477:CDS |
| GATTTGAGAGTGTAGATCTC+AGG | 0.445904 | 5.2:+35426083 | None:intergenic |
| CTTCGTGGTGTTCGTGGTAC+CGG | 0.445975 | 5.2:-35425774 | MS.gene95477:CDS |
| TTCTCTGTCAACCCCATCGA+TGG | 0.448198 | 5.2:+35425945 | None:intergenic |
| GGGAAGGAATATTGGTAGCT+AGG | 0.448466 | 5.2:+35425688 | None:intergenic |
| AGTTTGTGAGGAACATGGAT+TGG | 0.449786 | 5.2:-35424579 | MS.gene95477:CDS |
| ATTCCTTCCCTCGCTGACTT+TGG | 0.449943 | 5.2:-35425675 | MS.gene95477:CDS |
| GAGCATGTCTGGGACTCCTA+TGG | 0.455047 | 5.2:-35424731 | MS.gene95477:CDS |
| TATTGGATGTGGCTGTTAAT+GGG | 0.459064 | 5.2:-35424519 | MS.gene95477:CDS |
| CGATGTCTTAGTCGATCAAA+TGG | 0.462259 | 5.2:-35426003 | MS.gene95477:CDS |
| GCGGTGGTGTTAGTGGTGGT+AGG | 0.463470 | 5.2:+35426050 | None:intergenic |
| TATACTTCCTAGTGATAGCT+TGG | 0.463781 | 5.2:+35424404 | None:intergenic |
| TGTAACCTTCGTGGTGTTCG+TGG | 0.465043 | 5.2:-35425780 | MS.gene95477:CDS |
| AATCAAAATCAAAATCAAAA+GGG | 0.469877 | 5.2:+35425529 | None:intergenic |
| CCTTTCTGAGTGGATGGCAC+CGG | 0.470831 | 5.2:+35424313 | None:intergenic |
| ATAGGGTTCGTGATCGTTTG+AGG | 0.471872 | 5.2:-35425101 | MS.gene95477:CDS |
| TCACCAACGTTTCTCTCTAC+TGG | 0.473200 | 5.2:-35425918 | MS.gene95477:CDS |
| TGCCAAGAGGATCTTCCCTT+GGG | 0.479061 | 5.2:-35425160 | MS.gene95477:CDS |
| TTGCCAAGAGGATCTTCCCT+TGG | 0.480374 | 5.2:-35425161 | MS.gene95477:CDS |
| CCTAGTGATAGCTTGGTAAT+CGG | 0.480896 | 5.2:+35424411 | None:intergenic |
| AAAGGAGTGGCGTTGGTAAG+TGG | 0.484002 | 5.2:-35424295 | MS.gene95477:CDS |
| AGGAGGATCAGATGATTAAG+AGG | 0.485373 | 5.2:-35424489 | MS.gene95477:CDS |
| GCCTCAGCTTCATGTGATTG+AGG | 0.486098 | 5.2:-35424626 | MS.gene95477:CDS |
| AGAAGGAAGAGTGGAGGGAA+AGG | 0.487853 | 5.2:-35425587 | MS.gene95477:CDS |
| GTATCAGAAACTAGTTGTGC+TGG | 0.488835 | 5.2:-35424182 | MS.gene95477:CDS |
| TACTTGGAGGATGTGAAGGC+AGG | 0.488941 | 5.2:-35424919 | MS.gene95477:CDS |
| GTAATAACCTTCCCTTTCCA+TGG | 0.491644 | 5.2:+35424661 | None:intergenic |
| CTGATACTCAGGGCCGGTGA+TGG | 0.493268 | 5.2:+35424198 | None:intergenic |
| GTTCCTCACAAACTCTGTCT+TGG | 0.494008 | 5.2:+35424588 | None:intergenic |
| ATGTGTCTGGGAGCATGTCT+GGG | 0.495012 | 5.2:-35424741 | MS.gene95477:CDS |
| CCTCAGCTTCATGTGATTGA+GGG | 0.501770 | 5.2:-35424625 | MS.gene95477:CDS |
| ATCGTTAGTGGTTGTTGTGG+AGG | 0.501932 | 5.2:+35426022 | None:intergenic |
| ATGAGATTGTAGGGTCTTTG+GGG | 0.504171 | 5.2:-35424861 | MS.gene95477:CDS |
| GGATGGAGATGGTGGAGAAG+TGG | 0.510289 | 5.2:-35424839 | MS.gene95477:CDS |
| GGAATATGAAGGTGTGGAGG+AGG | 0.511393 | 5.2:-35425136 | MS.gene95477:CDS |
| ACAGAAGCCACCCTATTGTA+AGG | 0.513119 | 5.2:+35425000 | None:intergenic |
| TCAAGCGTCTGCAAACTCTT+GGG | 0.514244 | 5.2:-35424437 | MS.gene95477:CDS |
| GGAAGGAATATTGGTAGCTA+GGG | 0.519851 | 5.2:+35425689 | None:intergenic |
| CTCCCAAGGGAAGATCCTCT+TGG | 0.520806 | 5.2:+35425158 | None:intergenic |
| CAGCTTCCATGGCTTCTACA+GGG | 0.521562 | 5.2:+35424221 | None:intergenic |
| GAGGTTTGAGAAGTACTTGG+AGG | 0.521875 | 5.2:-35424932 | MS.gene95477:CDS |
| AGCAACCAAAACCCATCGAT+GGG | 0.523034 | 5.2:-35425957 | MS.gene95477:CDS |
| AGTGTCTCAGAAGGAGTGTC+GGG | 0.531841 | 5.2:+35425861 | None:intergenic |
| TTGCAGTGTGTGATGTGTCT+GGG | 0.534674 | 5.2:-35424753 | MS.gene95477:CDS |
| ACCGGTAAGTCTGACAAAGA+AGG | 0.537460 | 5.2:-35425756 | MS.gene95477:CDS |
| AAGGAGTGGCGTTGGTAAGT+GGG | 0.538847 | 5.2:-35424294 | MS.gene95477:CDS |
| CTTCAGAACCTTCGAGAAGA+CGG | 0.540737 | 5.2:+35425622 | None:intergenic |
| GACATCGTTAGTGGTTGTTG+TGG | 0.541165 | 5.2:+35426019 | None:intergenic |
| GCCACTCCTTTCTGAGTGGA+TGG | 0.541814 | 5.2:+35424307 | None:intergenic |
| AGAGGTGGCAGCGAGAGATA+AGG | 0.547672 | 5.2:-35425436 | MS.gene95477:CDS |
| GACTCCTATGGAGGTGTCTG+TGG | 0.550102 | 5.2:-35424719 | MS.gene95477:CDS |
| TCGAGAGACTCAAACTAGCT+TGG | 0.552185 | 5.2:-35425836 | MS.gene95477:CDS |
| CACTCAGAAAGGAGTGGCGT+TGG | 0.552699 | 5.2:-35424302 | MS.gene95477:CDS |
| AAACTCGTCTGTAACCTTCG+TGG | 0.553124 | 5.2:-35425789 | MS.gene95477:CDS |
| CCGATTACCAAGCTATCACT+AGG | 0.554285 | 5.2:-35424411 | MS.gene95477:CDS |
| TGAGTGAGGAACCATGGAAA+GGG | 0.555980 | 5.2:-35424672 | MS.gene95477:CDS |
| AACCTTCGAGAAGACGGTAG+AGG | 0.559476 | 5.2:+35425628 | None:intergenic |
| GACAGAGTTTGTGAGGAACA+TGG | 0.559767 | 5.2:-35424584 | MS.gene95477:CDS |
| GCTTGCCAGAGAATTGAAGT+TGG | 0.563939 | 5.2:+35425977 | None:intergenic |
| TCTCTGTCAACCCCATCGAT+GGG | 0.569197 | 5.2:+35425946 | None:intergenic |
| AAGCAACCAAAACCCATCGA+TGG | 0.569203 | 5.2:-35425958 | MS.gene95477:CDS |
| GAAGACGGTAGAGGATCTCA+GGG | 0.570432 | 5.2:+35425637 | None:intergenic |
| ATCCTCTACCGTCTTCTCGA+AGG | 0.571604 | 5.2:-35425630 | MS.gene95477:CDS |
| CCGGTGCCATCCACTCAGAA+AGG | 0.571959 | 5.2:-35424313 | MS.gene95477:CDS |
| ACACCTTCATATTCCTCCCA+AGG | 0.573102 | 5.2:+35425144 | None:intergenic |
| GATCTTTGTGTTCAGTGACA+TGG | 0.573186 | 5.2:-35424467 | MS.gene95477:CDS |
| CCCTCAATCACATGAAGCTG+AGG | 0.574703 | 5.2:+35424625 | None:intergenic |
| GGGAAGACTACTATTGCTGC+TGG | 0.579975 | 5.2:-35424898 | MS.gene95477:CDS |
| CGGTGGTGTTAGTGGTGGTA+GGG | 0.581199 | 5.2:+35426051 | None:intergenic |
| TGGAGGTGTCTGTGGCATTG+GGG | 0.582479 | 5.2:-35424711 | MS.gene95477:CDS |
| GAGAGACTCGAAGGCCACCC+CGG | 0.584902 | 5.2:-35424332 | MS.gene95477:CDS |
| TTGGAATCTGAGAGACTCGA+AGG | 0.585593 | 5.2:-35424341 | MS.gene95477:CDS |
| TAACCAAAGTCAGCGAGGGA+AGG | 0.585924 | 5.2:+35425672 | None:intergenic |
| AATGCCACAGACACCTCCAT+AGG | 0.586105 | 5.2:+35424715 | None:intergenic |
| AGGGAAGATCCTCTTGGCAA+TGG | 0.586959 | 5.2:+35425164 | None:intergenic |
| TTCCCTTGGGAGGAATATGA+AGG | 0.588989 | 5.2:-35425147 | MS.gene95477:CDS |
| GAGTGTCTCAGAAGGAGTGT+CGG | 0.590014 | 5.2:+35425860 | None:intergenic |
| CATGTCTGGGACTCCTATGG+AGG | 0.590641 | 5.2:-35424728 | MS.gene95477:CDS |
| CTCAGCTTCATGTGATTGAG+GGG | 0.591797 | 5.2:-35424624 | MS.gene95477:CDS |
| ATCAAAATCAAAATCAAAAG+GGG | 0.592135 | 5.2:+35425530 | None:intergenic |
| TGAAGTTCGCAAAACGCAGA+AGG | 0.593546 | 5.2:-35425604 | MS.gene95477:CDS |
| TTGAGTGAGGAACCATGGAA+AGG | 0.593836 | 5.2:-35424673 | MS.gene95477:CDS |
| CCGGTAAGTCTGACAAAGAA+GGG | 0.594633 | 5.2:-35425755 | MS.gene95477:CDS |
| TATAAGCCCTGTAGAAGCCA+TGG | 0.596604 | 5.2:-35424227 | MS.gene95477:CDS |
| TTGAGAGTGTAGATCTCAGG+TGG | 0.598107 | 5.2:+35426086 | None:intergenic |
| TCAAAGGAAGAGTCAACGGA+AGG | 0.598171 | 5.2:+35425210 | None:intergenic |
| TTTGATTCCTTACAATAGGG+TGG | 0.598708 | 5.2:-35425007 | MS.gene95477:CDS |
| ACATTGTTCTTGGATAATGA+AGG | 0.599605 | 5.2:-35424253 | MS.gene95477:CDS |
| TGAGATTGTAGGGTCTTTGG+GGG | 0.600168 | 5.2:-35424860 | MS.gene95477:CDS |
| TTTGTGAGGAACATGGATTG+GGG | 0.600633 | 5.2:-35424577 | MS.gene95477:CDS |
| TTAGAACCAATAAACACCTC+AGG | 0.602489 | 5.2:+35425039 | None:intergenic |
| GAAGTACTTGGAGGATGTGA+AGG | 0.604063 | 5.2:-35424923 | MS.gene95477:CDS |
| ACTTGGAGGATGTGAAGGCA+GGG | 0.604217 | 5.2:-35424918 | MS.gene95477:CDS |
| TGTGTTGGTGCCGTTGAGGA+AGG | 0.604572 | 5.2:-35425073 | MS.gene95477:CDS |
| CTCTCGACGAGTGTCTCAGA+AGG | 0.605004 | 5.2:+35425852 | None:intergenic |
| CAAGAGGATCTTCCCTTGGG+AGG | 0.606223 | 5.2:-35425157 | MS.gene95477:CDS |
| CCGAATTGAGTGAGGAACCA+TGG | 0.607067 | 5.2:-35424678 | MS.gene95477:CDS |
| GAGAAGTGGCTGAGTTGCAG+TGG | 0.607162 | 5.2:-35424825 | MS.gene95477:CDS |
| AACGCAGAAGGAAGAGTGGA+GGG | 0.607854 | 5.2:-35425592 | MS.gene95477:CDS |
| CCGATCAAAGGAAGAGTCAA+CGG | 0.608539 | 5.2:+35425206 | None:intergenic |
| TGGAAGAAGAAATCAAGACA+TGG | 0.609649 | 5.2:+35425891 | None:intergenic |
| GGTTGTTGTGGAGGTTTGAG+CGG | 0.610193 | 5.2:+35426031 | None:intergenic |
| AGGTGGGCCAACGAGAGTGA+CGG | 0.610407 | 5.2:+35426103 | None:intergenic |
| CACCTTCATATTCCTCCCAA+GGG | 0.611175 | 5.2:+35425145 | None:intergenic |
| ATGGCCGCCGTCACTCTCGT+TGG | 0.612849 | 5.2:-35426110 | MS.gene95477:CDS |
| TAGTTTCTGATACTCAGGGC+CGG | 0.614102 | 5.2:+35424192 | None:intergenic |
| TGTTGTGGAGGTTTGAGCGG+TGG | 0.615236 | 5.2:+35426034 | None:intergenic |
| CTGAGTGGATGGCACCGGGG+TGG | 0.616153 | 5.2:+35424318 | None:intergenic |
| AAACGCAGAAGGAAGAGTGG+AGG | 0.617951 | 5.2:-35425593 | MS.gene95477:CDS |
| TAACAGCGTTGACCGATCAA+AGG | 0.617986 | 5.2:+35425194 | None:intergenic |
| GATGAACACTGATTTCCAGA+AGG | 0.618463 | 5.2:-35424554 | MS.gene95477:CDS |
| GGTGCCGTTGAGGAAGGTGT+TGG | 0.622773 | 5.2:-35425067 | MS.gene95477:CDS |
| GGCTGTTAATGGGAATCTCA+AGG | 0.624032 | 5.2:-35424509 | MS.gene95477:CDS |
| TTGAGCGGTGGTGTTAGTGG+TGG | 0.625189 | 5.2:+35426046 | None:intergenic |
| AGACTTCATCAAGACTGAAG+AGG | 0.626501 | 5.2:-35425454 | MS.gene95477:CDS |
| TTGTGAGGAACATGGATTGG+GGG | 0.626844 | 5.2:-35424576 | MS.gene95477:CDS |
| AATTCCAACACCTTCCTCAA+CGG | 0.628014 | 5.2:+35425063 | None:intergenic |
| CTTCATCAAGACTGAAGAGG+TGG | 0.631113 | 5.2:-35425451 | MS.gene95477:CDS |
| CAACGCCACTCCTTTCTGAG+TGG | 0.632496 | 5.2:+35424303 | None:intergenic |
| TTGGGAGGAATATGAAGGTG+TGG | 0.633554 | 5.2:-35425142 | MS.gene95477:CDS |
| GAAGTAACCAAAGTCAGCGA+GGG | 0.641029 | 5.2:+35425668 | None:intergenic |
| GGAGGAATATGAAGGTGTGG+AGG | 0.643817 | 5.2:-35425139 | MS.gene95477:CDS |
| TCGTTTGAGGAAAGATGTGT+TGG | 0.647723 | 5.2:-35425088 | MS.gene95477:CDS |
| TGAGGAACCATGGAAAGGGA+AGG | 0.648812 | 5.2:-35424668 | MS.gene95477:CDS |
| GCAAAACGCAGAAGGAAGAG+TGG | 0.649001 | 5.2:-35425596 | MS.gene95477:CDS |
| TTCATGAAACCATAGAGCAG+CGG | 0.650549 | 5.2:+35425725 | None:intergenic |
| GGAAGAAGAAATCAAGACAT+GGG | 0.651030 | 5.2:+35425892 | None:intergenic |
| AAGGAGTGTCGGGAACAACA+TGG | 0.651711 | 5.2:+35425871 | None:intergenic |
| AAGATGTGTTGGTGCCGTTG+AGG | 0.652976 | 5.2:-35425077 | MS.gene95477:CDS |
| CAACTAGTTTCTGATACTCA+GGG | 0.653189 | 5.2:+35424188 | None:intergenic |
| CAAAGGAAGAGTCAACGGAA+GGG | 0.653236 | 5.2:+35425211 | None:intergenic |
| GTTGGTGTCCGAATTGAGTG+AGG | 0.654872 | 5.2:-35424686 | MS.gene95477:CDS |
| GCCATCCACTCAGAAAGGAG+TGG | 0.658080 | 5.2:-35424308 | MS.gene95477:CDS |
| AGTCCAAGACAGAGTTTGTG+AGG | 0.661977 | 5.2:-35424591 | MS.gene95477:CDS |
| TGGGCCAACGAGAGTGACGG+CGG | 0.663912 | 5.2:+35426106 | None:intergenic |
| AAAGACCCTACAATCTCATG+AGG | 0.664431 | 5.2:+35424865 | None:intergenic |
| TCAGCTTCATGTGATTGAGG+GGG | 0.673206 | 5.2:-35424623 | MS.gene95477:CDS |
| TGTCTTAGTCGATCAAATGG+TGG | 0.681041 | 5.2:-35426000 | MS.gene95477:CDS |
| TGAAGTAACCAAAGTCAGCG+AGG | 0.688387 | 5.2:+35425667 | None:intergenic |
| TGAGAGTGTAGATCTCAGGT+GGG | 0.694001 | 5.2:+35426087 | None:intergenic |
| TTTCTGAGTGGATGGCACCG+GGG | 0.698885 | 5.2:+35424315 | None:intergenic |
| CGGTACCACGAACACCACGA+AGG | 0.704527 | 5.2:+35425775 | None:intergenic |
| GAAGGTGTTGGAATTGCCTG+AGG | 0.709397 | 5.2:-35425055 | MS.gene95477:CDS |
| GCAACCAAAACCCATCGATG+GGG | 0.709625 | 5.2:-35425956 | MS.gene95477:CDS |
| TATGTGAGACCATTGCCAAG+AGG | 0.711412 | 5.2:-35425173 | MS.gene95477:CDS |
| TTACCAGTAGAGAGAAACGT+TGG | 0.717379 | 5.2:+35425915 | None:intergenic |
| TGTTAATGGGAATCTCAAGG+AGG | 0.769174 | 5.2:-35424506 | MS.gene95477:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCAAAATCAAAATCAAA+AGG | + | chr5.2:35424762-35424781 | None:intergenic | 15.0% |
| !! | AATCAAAATCAAAATCAAAA+GGG | + | chr5.2:35424761-35424780 | None:intergenic | 15.0% |
| !!! | TTGATTTTGATTTTGATTTT+AGG | - | chr5.2:35424763-35424782 | MS.gene95477:CDS | 15.0% |
| !! | AAGTATAAAGAAAAAGGATA+TGG | - | chr5.2:35425899-35425918 | MS.gene95477:CDS | 20.0% |
| !! | ATCAAAATCAAAATCAAAAG+GGG | + | chr5.2:35424760-35424779 | None:intergenic | 20.0% |
| !!! | TATTGATGAAGATTTTCTTT+TGG | + | chr5.2:35424736-35424755 | None:intergenic | 20.0% |
| ! | ATCATGAAGAAACTTGAAAT+TGG | + | chr5.2:35424961-35424980 | None:intergenic | 25.0% |
| ! | TCATGAAGAAACTTGAAATT+GGG | + | chr5.2:35424960-35424979 | None:intergenic | 25.0% |
| !! | ACTAGGAAGTATAAAGAAAA+AGG | - | chr5.2:35425893-35425912 | MS.gene95477:CDS | 25.0% |
| !!! | GTTTATTGGTTCTAATCAAT+GGG | - | chr5.2:35425256-35425275 | MS.gene95477:CDS | 25.0% |
| !!! | TGTAGCAATGAAGTTTTATA+AGG | - | chr5.2:35425307-35425326 | MS.gene95477:CDS | 25.0% |
| !!! | TGTTTATTGGTTCTAATCAA+TGG | - | chr5.2:35425255-35425274 | MS.gene95477:CDS | 25.0% |
| !!! | TTTGATTTTGATTTTAGGAG+AGG | - | chr5.2:35424768-35424787 | MS.gene95477:CDS | 25.0% |
| ACATTGTTCTTGGATAATGA+AGG | - | chr5.2:35426034-35426053 | MS.gene95477:CDS | 30.0% | |
| AGATTCCAAAAAACTATCTG+AGG | + | chr5.2:35425935-35425954 | None:intergenic | 30.0% | |
| ATATGCAATCAAAAACCTTC+TGG | + | chr5.2:35425751-35425770 | None:intergenic | 30.0% | |
| GGATTTGATTCCTTACAATA+GGG | - | chr5.2:35425277-35425296 | MS.gene95477:CDS | 30.0% | |
| !! | GAAGGTTTTTGATTGCATAT+TGG | - | chr5.2:35425751-35425770 | MS.gene95477:CDS | 30.0% |
| !! | GTTGATGATTTGCTTAAGAA+AGG | - | chr5.2:35425494-35425513 | MS.gene95477:CDS | 30.0% |
| !! | TTTTGATTGCATATTGGATG+TGG | - | chr5.2:35425757-35425776 | MS.gene95477:CDS | 30.0% |
| !! | TTTTGCTGATTGTTTGAAGA+AGG | - | chr5.2:35424995-35425014 | MS.gene95477:CDS | 30.0% |
| !!! | ATCTCGAGTTTTTGAAATCT+GGG | - | chr5.2:35425018-35425037 | MS.gene95477:CDS | 30.0% |
| !!! | CTTTCTTGTTTTTGTTGTTG+TGG | + | chr5.2:35424815-35424834 | None:intergenic | 30.0% |
| !!! | GAAGTTTTTGAAGCATGATA+AGG | - | chr5.2:35425331-35425350 | MS.gene95477:CDS | 30.0% |
| AAATCAGTCTTGCTGCTAAA+TGG | - | chr5.2:35425051-35425070 | MS.gene95477:CDS | 35.0% | |
| ATATTGGATGTGGCTGTTAA+TGG | - | chr5.2:35425767-35425786 | MS.gene95477:CDS | 35.0% | |
| GGAAGAAGAAATCAAGACAT+GGG | + | chr5.2:35424398-35424417 | None:intergenic | 35.0% | |
| GGGATTTGATTCCTTACAAT+AGG | - | chr5.2:35425276-35425295 | MS.gene95477:CDS | 35.0% | |
| TATACTTCCTAGTGATAGCT+TGG | + | chr5.2:35425886-35425905 | None:intergenic | 35.0% | |
| TATTGGATGTGGCTGTTAAT+GGG | - | chr5.2:35425768-35425787 | MS.gene95477:CDS | 35.0% | |
| TGGAAGAAGAAATCAAGACA+TGG | + | chr5.2:35424399-35424418 | None:intergenic | 35.0% | |
| TTAGAACCAATAAACACCTC+AGG | + | chr5.2:35425251-35425270 | None:intergenic | 35.0% | |
| TTTGATTCCTTACAATAGGG+TGG | - | chr5.2:35425280-35425299 | MS.gene95477:CDS | 35.0% | |
| ! | AAGGTTACAGACGAGTTTTA+GGG | + | chr5.2:35424496-35424515 | None:intergenic | 35.0% |
| ! | ACAACTAGTTTCTGATACTC+AGG | + | chr5.2:35426103-35426122 | None:intergenic | 35.0% |
| ! | CAACTAGTTTCTGATACTCA+GGG | + | chr5.2:35426102-35426121 | None:intergenic | 35.0% |
| !! | ATATTGGTAGCTAGGGTTTT+AGG | + | chr5.2:35424594-35424613 | None:intergenic | 35.0% |
| !! | TATTGGTAGCTAGGGTTTTA+GGG | + | chr5.2:35424593-35424612 | None:intergenic | 35.0% |
| !!! | GATCTCGAGTTTTTGAAATC+TGG | - | chr5.2:35425017-35425036 | MS.gene95477:CDS | 35.0% |
| !!! | TTTTGAAGCATGATAAGGAG+AGG | - | chr5.2:35425336-35425355 | MS.gene95477:CDS | 35.0% |
| AAAGACCCTACAATCTCATG+AGG | + | chr5.2:35425425-35425444 | None:intergenic | 40.0% | |
| AATTCCAACACCTTCCTCAA+CGG | + | chr5.2:35425227-35425246 | None:intergenic | 40.0% | |
| AGACTTCATCAAGACTGAAG+AGG | - | chr5.2:35424833-35424852 | MS.gene95477:CDS | 40.0% | |
| AGGAGGATCAGATGATTAAG+AGG | - | chr5.2:35425798-35425817 | MS.gene95477:CDS | 40.0% | |
| AGTTTGTGAGGAACATGGAT+TGG | - | chr5.2:35425708-35425727 | MS.gene95477:CDS | 40.0% | |
| ATCGACTAAGACATCGTTAG+TGG | + | chr5.2:35424280-35424299 | None:intergenic | 40.0% | |
| ATGAGATTGTAGGGTCTTTG+GGG | - | chr5.2:35425426-35425445 | MS.gene95477:CDS | 40.0% | |
| CATGAGATTGTAGGGTCTTT+GGG | - | chr5.2:35425425-35425444 | MS.gene95477:CDS | 40.0% | |
| CGATGTCTTAGTCGATCAAA+TGG | - | chr5.2:35424284-35424303 | MS.gene95477:CDS | 40.0% | |
| GAATCTGCTGACATTGTTCT+TGG | - | chr5.2:35426024-35426043 | MS.gene95477:CDS | 40.0% | |
| GATCTTTGTGTTCAGTGACA+TGG | - | chr5.2:35425820-35425839 | MS.gene95477:CDS | 40.0% | |
| GTAATAACCTTCCCTTTCCA+TGG | + | chr5.2:35425629-35425648 | None:intergenic | 40.0% | |
| GTATCAGAAACTAGTTGTGC+TGG | - | chr5.2:35426105-35426124 | MS.gene95477:CDS | 40.0% | |
| GTTTGTGAGGAACATGGATT+GGG | - | chr5.2:35425709-35425728 | MS.gene95477:CDS | 40.0% | |
| TCATGAGATTGTAGGGTCTT+TGG | - | chr5.2:35425424-35425443 | MS.gene95477:CDS | 40.0% | |
| TCGTTTGAGGAAAGATGTGT+TGG | - | chr5.2:35425199-35425218 | MS.gene95477:CDS | 40.0% | |
| TGCTTCCTCATGAGATTGTA+GGG | - | chr5.2:35425417-35425436 | MS.gene95477:CDS | 40.0% | |
| TGTCTTAGTCGATCAAATGG+TGG | - | chr5.2:35424287-35424306 | MS.gene95477:CDS | 40.0% | |
| TGTTAATGGGAATCTCAAGG+AGG | - | chr5.2:35425781-35425800 | MS.gene95477:CDS | 40.0% | |
| TTACCAGTAGAGAGAAACGT+TGG | + | chr5.2:35424375-35424394 | None:intergenic | 40.0% | |
| TTCATGAAACCATAGAGCAG+CGG | + | chr5.2:35424565-35424584 | None:intergenic | 40.0% | |
| TTGCTTCCTCATGAGATTGT+AGG | - | chr5.2:35425416-35425435 | MS.gene95477:CDS | 40.0% | |
| ! | CCTAGTGATAGCTTGGTAAT+CGG | + | chr5.2:35425879-35425898 | None:intergenic | 40.0% |
| ! | GAAGGTTACAGACGAGTTTT+AGG | + | chr5.2:35424497-35424516 | None:intergenic | 40.0% |
| ! | GAATTGCCTGAGGTGTTTAT+TGG | - | chr5.2:35425242-35425261 | MS.gene95477:CDS | 40.0% |
| ! | GATTTGAGAGTGTAGATCTC+AGG | + | chr5.2:35424207-35424226 | None:intergenic | 40.0% |
| ! | GGAAGGAATATTGGTAGCTA+GGG | + | chr5.2:35424601-35424620 | None:intergenic | 40.0% |
| ! | TTTGTGAGGAACATGGATTG+GGG | - | chr5.2:35425710-35425729 | MS.gene95477:CDS | 40.0% |
| !! | AGCAGCAAGACTGATTTTTG+TGG | + | chr5.2:35425048-35425067 | None:intergenic | 40.0% |
| !! | GATGAACACTGATTTCCAGA+AGG | - | chr5.2:35425733-35425752 | MS.gene95477:CDS | 40.0% |
| !! | GCAGCAAGACTGATTTTTGT+GGG | + | chr5.2:35425047-35425066 | None:intergenic | 40.0% |
| !!! | ACGTTTTGAAGCAAGAGAAG+AGG | - | chr5.2:35424892-35424911 | MS.gene95477:CDS | 40.0% |
| !!! | CTGTGCCTCAGATAGTTTTT+TGG | - | chr5.2:35425927-35425946 | MS.gene95477:CDS | 40.0% |
| AAACTCGTCTGTAACCTTCG+TGG | - | chr5.2:35424498-35424517 | MS.gene95477:CDS | 45.0% | |
| AAGCAACCAAAACCCATCGA+TGG | - | chr5.2:35424329-35424348 | MS.gene95477:CDS | 45.0% | |
| ACACCTTCATATTCCTCCCA+AGG | + | chr5.2:35425146-35425165 | None:intergenic | 45.0% | |
| ACAGAAGCCACCCTATTGTA+AGG | + | chr5.2:35425290-35425309 | None:intergenic | 45.0% | |
| ACCGGTAAGTCTGACAAAGA+AGG | - | chr5.2:35424531-35424550 | MS.gene95477:CDS | 45.0% | |
| AGCAACCAAAACCCATCGAT+GGG | - | chr5.2:35424330-35424349 | MS.gene95477:CDS | 45.0% | |
| AGTCCAAGACAGAGTTTGTG+AGG | - | chr5.2:35425696-35425715 | MS.gene95477:CDS | 45.0% | |
| ATAGGGTTCGTGATCGTTTG+AGG | - | chr5.2:35425186-35425205 | MS.gene95477:CDS | 45.0% | |
| ATCAAGCGTCTGCAAACTCT+TGG | - | chr5.2:35425849-35425868 | MS.gene95477:CDS | 45.0% | |
| ATCGTTAGTGGTTGTTGTGG+AGG | + | chr5.2:35424268-35424287 | None:intergenic | 45.0% | |
| CAAAGGAAGAGTCAACGGAA+GGG | + | chr5.2:35425079-35425098 | None:intergenic | 45.0% | |
| CACCTTCATATTCCTCCCAA+GGG | + | chr5.2:35425145-35425164 | None:intergenic | 45.0% | |
| CCATGGTTCCTCACTCAATT+CGG | + | chr5.2:35425612-35425631 | None:intergenic | 45.0% | |
| CCCTTCTTTGTCAGACTTAC+CGG | + | chr5.2:35424535-35424554 | None:intergenic | 45.0% | |
| CCGATCAAAGGAAGAGTCAA+CGG | + | chr5.2:35425084-35425103 | None:intergenic | 45.0% | |
| CCGATTACCAAGCTATCACT+AGG | - | chr5.2:35425876-35425895 | MS.gene95477:CDS | 45.0% | |
| CCGGTAAGTCTGACAAAGAA+GGG | - | chr5.2:35424532-35424551 | MS.gene95477:CDS | 45.0% | |
| CCTCAGCTTCATGTGATTGA+GGG | - | chr5.2:35425662-35425681 | MS.gene95477:CDS | 45.0% | |
| CTCAGCTTCATGTGATTGAG+GGG | - | chr5.2:35425663-35425682 | MS.gene95477:CDS | 45.0% | |
| CTTCAGAACCTTCGAGAAGA+CGG | + | chr5.2:35424668-35424687 | None:intergenic | 45.0% | |
| CTTCATCAAGACTGAAGAGG+TGG | - | chr5.2:35424836-35424855 | MS.gene95477:CDS | 45.0% | |
| GAAGTAACCAAAGTCAGCGA+GGG | + | chr5.2:35424622-35424641 | None:intergenic | 45.0% | |
| GACAGAGTTTGTGAGGAACA+TGG | - | chr5.2:35425703-35425722 | MS.gene95477:CDS | 45.0% | |
| GACATCGTTAGTGGTTGTTG+TGG | + | chr5.2:35424271-35424290 | None:intergenic | 45.0% | |
| GCTTGCCAGAGAATTGAAGT+TGG | + | chr5.2:35424313-35424332 | None:intergenic | 45.0% | |
| GGCTGTTAATGGGAATCTCA+AGG | - | chr5.2:35425778-35425797 | MS.gene95477:CDS | 45.0% | |
| GTTCCTCACAAACTCTGTCT+TGG | + | chr5.2:35425702-35425721 | None:intergenic | 45.0% | |
| TAGTTTCTGATACTCAGGGC+CGG | + | chr5.2:35426098-35426117 | None:intergenic | 45.0% | |
| TATAAGCCCTGTAGAAGCCA+TGG | - | chr5.2:35426060-35426079 | MS.gene95477:CDS | 45.0% | |
| TATGTGAGACCATTGCCAAG+AGG | - | chr5.2:35425114-35425133 | MS.gene95477:CDS | 45.0% | |
| TCAAAGGAAGAGTCAACGGA+AGG | + | chr5.2:35425080-35425099 | None:intergenic | 45.0% | |
| TCAAGCGTCTGCAAACTCTT+GGG | - | chr5.2:35425850-35425869 | MS.gene95477:CDS | 45.0% | |
| TCACCAACGTTTCTCTCTAC+TGG | - | chr5.2:35424369-35424388 | MS.gene95477:CDS | 45.0% | |
| TCAGCTTCATGTGATTGAGG+GGG | - | chr5.2:35425664-35425683 | MS.gene95477:CDS | 45.0% | |
| TCGAGAGACTCAAACTAGCT+TGG | - | chr5.2:35424451-35424470 | MS.gene95477:CDS | 45.0% | |
| TGAAGTAACCAAAGTCAGCG+AGG | + | chr5.2:35424623-35424642 | None:intergenic | 45.0% | |
| TGAAGTTCGCAAAACGCAGA+AGG | - | chr5.2:35424683-35424702 | MS.gene95477:CDS | 45.0% | |
| TGAGATTGTAGGGTCTTTGG+GGG | - | chr5.2:35425427-35425446 | MS.gene95477:CDS | 45.0% | |
| TGAGTGAGGAACCATGGAAA+GGG | - | chr5.2:35425615-35425634 | MS.gene95477:CDS | 45.0% | |
| TGTTAGTGGTGGTAGGGTTA+GGG | + | chr5.2:35424233-35424252 | None:intergenic | 45.0% | |
| TTCCCTTGGGAGGAATATGA+AGG | - | chr5.2:35425140-35425159 | MS.gene95477:CDS | 45.0% | |
| TTGAGTGAGGAACCATGGAA+AGG | - | chr5.2:35425614-35425633 | MS.gene95477:CDS | 45.0% | |
| TTGCAGTGTGTGATGTGTCT+GGG | - | chr5.2:35425534-35425553 | MS.gene95477:CDS | 45.0% | |
| TTGGAATCTGAGAGACTCGA+AGG | - | chr5.2:35425946-35425965 | MS.gene95477:CDS | 45.0% | |
| TTGGGAGGAATATGAAGGTG+TGG | - | chr5.2:35425145-35425164 | MS.gene95477:CDS | 45.0% | |
| ! | AGGAGGCGCATTATGCTTAT+AGG | - | chr5.2:35425168-35425187 | MS.gene95477:CDS | 45.0% |
| ! | GAAGTACTTGGAGGATGTGA+AGG | - | chr5.2:35425364-35425383 | MS.gene95477:CDS | 45.0% |
| ! | GGAGGCGCATTATGCTTATA+GGG | - | chr5.2:35425169-35425188 | MS.gene95477:CDS | 45.0% |
| ! | GGGAAGGAATATTGGTAGCT+AGG | + | chr5.2:35424602-35424621 | None:intergenic | 45.0% |
| ! | TGAGAGTGTAGATCTCAGGT+GGG | + | chr5.2:35424203-35424222 | None:intergenic | 45.0% |
| ! | TTGAGAGTGTAGATCTCAGG+TGG | + | chr5.2:35424204-35424223 | None:intergenic | 45.0% |
| !! | CCGTTGACTCTTCCTTTGAT+CGG | - | chr5.2:35425081-35425100 | MS.gene95477:CDS | 45.0% |
| !! | GAGGTTTGAGAAGTACTTGG+AGG | - | chr5.2:35425355-35425374 | MS.gene95477:CDS | 45.0% |
| !! | GGAGAGGTTTGAGAAGTACT+TGG | - | chr5.2:35425352-35425371 | MS.gene95477:CDS | 45.0% |
| !! | TAACAGCGTTGACCGATCAA+AGG | + | chr5.2:35425096-35425115 | None:intergenic | 45.0% |
| !! | TAGGGTGGTGAGTGGATTTT+GGG | + | chr5.2:35424478-35424497 | None:intergenic | 45.0% |
| !! | TTAGGGTGGTGAGTGGATTT+TGG | + | chr5.2:35424479-35424498 | None:intergenic | 45.0% |
| !! | TTGTGAGGAACATGGATTGG+GGG | - | chr5.2:35425711-35425730 | MS.gene95477:CDS | 45.0% |
| !!! | GTTACAGACGAGTTTTAGGG+TGG | + | chr5.2:35424493-35424512 | None:intergenic | 45.0% |
| AAACGCAGAAGGAAGAGTGG+AGG | - | chr5.2:35424694-35424713 | MS.gene95477:CDS | 50.0% | |
| AACCTTCGAGAAGACGGTAG+AGG | + | chr5.2:35424662-35424681 | None:intergenic | 50.0% | |
| AACGCAGAAGGAAGAGTGGA+GGG | - | chr5.2:35424695-35424714 | MS.gene95477:CDS | 50.0% | |
| AATGCCACAGACACCTCCAT+AGG | + | chr5.2:35425575-35425594 | None:intergenic | 50.0% | |
| ACTTGGAGGATGTGAAGGCA+GGG | - | chr5.2:35425369-35425388 | MS.gene95477:CDS | 50.0% | |
| AGAAGACGGTAGAGGATCTC+AGG | + | chr5.2:35424654-35424673 | None:intergenic | 50.0% | |
| AGAAGGAAGAGTGGAGGGAA+AGG | - | chr5.2:35424700-35424719 | MS.gene95477:CDS | 50.0% | |
| AGGGAAGATCCTCTTGGCAA+TGG | + | chr5.2:35425126-35425145 | None:intergenic | 50.0% | |
| ATCCTCTACCGTCTTCTCGA+AGG | - | chr5.2:35424657-35424676 | MS.gene95477:CDS | 50.0% | |
| CAGCTTCCATGGCTTCTACA+GGG | + | chr5.2:35426069-35426088 | None:intergenic | 50.0% | |
| CCCTCAATCACATGAAGCTG+AGG | + | chr5.2:35425665-35425684 | None:intergenic | 50.0% | |
| CCGAATTGAGTGAGGAACCA+TGG | - | chr5.2:35425609-35425628 | MS.gene95477:CDS | 50.0% | |
| CTTGCAGTGTGTGATGTGTC+TGG | - | chr5.2:35425533-35425552 | MS.gene95477:CDS | 50.0% | |
| GAAGACGGTAGAGGATCTCA+GGG | + | chr5.2:35424653-35424672 | None:intergenic | 50.0% | |
| GAGTGGAGGGAAAGGAAATC+TGG | - | chr5.2:35424708-35424727 | MS.gene95477:CDS | 50.0% | |
| GCAAAACGCAGAAGGAAGAG+TGG | - | chr5.2:35424691-35424710 | MS.gene95477:CDS | 50.0% | |
| GCAACCAAAACCCATCGATG+GGG | - | chr5.2:35424331-35424350 | MS.gene95477:CDS | 50.0% | |
| GCCTCAGCTTCATGTGATTG+AGG | - | chr5.2:35425661-35425680 | MS.gene95477:CDS | 50.0% | |
| GGGAAGACTACTATTGCTGC+TGG | - | chr5.2:35425389-35425408 | MS.gene95477:CDS | 50.0% | |
| GGTGGCCAACTTCAATTCTC+TGG | - | chr5.2:35424305-35424324 | MS.gene95477:CDS | 50.0% | |
| GGTTGTTGTGGAGGTTTGAG+CGG | + | chr5.2:35424259-35424278 | None:intergenic | 50.0% | |
| GTCAGCGAGGGAAGGAATAT+TGG | + | chr5.2:35424610-35424629 | None:intergenic | 50.0% | |
| GTGTTAGTGGTGGTAGGGTT+AGG | + | chr5.2:35424234-35424253 | None:intergenic | 50.0% | |
| TAACCAAAGTCAGCGAGGGA+AGG | + | chr5.2:35424618-35424637 | None:intergenic | 50.0% | |
| TACTTGGAGGATGTGAAGGC+AGG | - | chr5.2:35425368-35425387 | MS.gene95477:CDS | 50.0% | |
| TCTCTGTCAACCCCATCGAT+GGG | + | chr5.2:35424344-35424363 | None:intergenic | 50.0% | |
| TGAGGAACCATGGAAAGGGA+AGG | - | chr5.2:35425619-35425638 | MS.gene95477:CDS | 50.0% | |
| TGCCAAGAGGATCTTCCCTT+GGG | - | chr5.2:35425127-35425146 | MS.gene95477:CDS | 50.0% | |
| TGTAACCTTCGTGGTGTTCG+TGG | - | chr5.2:35424507-35424526 | MS.gene95477:CDS | 50.0% | |
| TTCTCTGTCAACCCCATCGA+TGG | + | chr5.2:35424345-35424364 | None:intergenic | 50.0% | |
| TTGCCAAGAGGATCTTCCCT+TGG | - | chr5.2:35425126-35425145 | MS.gene95477:CDS | 50.0% | |
| ! | ATGTGTCTGGGAGCATGTCT+GGG | - | chr5.2:35425546-35425565 | MS.gene95477:CDS | 50.0% |
| ! | ATTGTAGGGTCTTTGGGGGA+TGG | - | chr5.2:35425431-35425450 | MS.gene95477:CDS | 50.0% |
| ! | GAGTGTCTCAGAAGGAGTGT+CGG | + | chr5.2:35424430-35424449 | None:intergenic | 50.0% |
| ! | GGAATATGAAGGTGTGGAGG+AGG | - | chr5.2:35425151-35425170 | MS.gene95477:CDS | 50.0% |
| ! | GGAGGAATATGAAGGTGTGG+AGG | - | chr5.2:35425148-35425167 | MS.gene95477:CDS | 50.0% |
| ! | GTTGGTGTCCGAATTGAGTG+AGG | - | chr5.2:35425601-35425620 | MS.gene95477:CDS | 50.0% |
| !! | AAAGGAGTGGCGTTGGTAAG+TGG | - | chr5.2:35425992-35426011 | MS.gene95477:CDS | 50.0% |
| !! | AAGATGTGTTGGTGCCGTTG+AGG | - | chr5.2:35425210-35425229 | MS.gene95477:CDS | 50.0% |
| !! | AAGGAGTGGCGTTGGTAAGT+GGG | - | chr5.2:35425993-35426012 | MS.gene95477:CDS | 50.0% |
| !! | AAGGAGTGTCGGGAACAACA+TGG | + | chr5.2:35424419-35424438 | None:intergenic | 50.0% |
| !! | AGTGTCTCAGAAGGAGTGTC+GGG | + | chr5.2:35424429-35424448 | None:intergenic | 50.0% |
| !! | ATGGAGGTGTCTGTGGCATT+GGG | - | chr5.2:35425575-35425594 | MS.gene95477:CDS | 50.0% |
| !! | ATTCCTTCCCTCGCTGACTT+TGG | - | chr5.2:35424612-35424631 | MS.gene95477:CDS | 50.0% |
| !! | GAAGGTGTTGGAATTGCCTG+AGG | - | chr5.2:35425232-35425251 | MS.gene95477:CDS | 50.0% |
| !! | TATGGAGGTGTCTGTGGCAT+TGG | - | chr5.2:35425574-35425593 | MS.gene95477:CDS | 50.0% |
| !! | TCAACCCCATCGATGGGTTT+TGG | + | chr5.2:35424338-35424357 | None:intergenic | 50.0% |
| !!! | ACGAGTTTTAGGGTGGTGAG+TGG | + | chr5.2:35424486-35424505 | None:intergenic | 50.0% |
| AGAGGTGGCAGCGAGAGATA+AGG | - | chr5.2:35424851-35424870 | MS.gene95477:CDS | 55.0% | |
| CAACGCCACTCCTTTCTGAG+TGG | + | chr5.2:35425987-35426006 | None:intergenic | 55.0% | |
| CAAGAGGATCTTCCCTTGGG+AGG | - | chr5.2:35425130-35425149 | MS.gene95477:CDS | 55.0% | |
| CACTCAGAAAGGAGTGGCGT+TGG | - | chr5.2:35425985-35426004 | MS.gene95477:CDS | 55.0% | |
| CCTTTCTGAGTGGATGGCAC+CGG | + | chr5.2:35425977-35425996 | None:intergenic | 55.0% | |
| CTCCCAAGGGAAGATCCTCT+TGG | + | chr5.2:35425132-35425151 | None:intergenic | 55.0% | |
| CTCTCGACGAGTGTCTCAGA+AGG | + | chr5.2:35424438-35424457 | None:intergenic | 55.0% | |
| CTTCGTGGTGTTCGTGGTAC+CGG | - | chr5.2:35424513-35424532 | MS.gene95477:CDS | 55.0% | |
| CTTTCTGAGTGGATGGCACC+GGG | + | chr5.2:35425976-35425995 | None:intergenic | 55.0% | |
| GAGAAGTGGCTGAGTTGCAG+TGG | - | chr5.2:35425462-35425481 | MS.gene95477:CDS | 55.0% | |
| GCAGCTTCCATGGCTTCTAC+AGG | + | chr5.2:35426070-35426089 | None:intergenic | 55.0% | |
| GCCACTCCTTTCTGAGTGGA+TGG | + | chr5.2:35425983-35426002 | None:intergenic | 55.0% | |
| GCCATCCACTCAGAAAGGAG+TGG | - | chr5.2:35425979-35425998 | MS.gene95477:CDS | 55.0% | |
| TGTTGTGGAGGTTTGAGCGG+TGG | + | chr5.2:35424256-35424275 | None:intergenic | 55.0% | |
| TTTCTGAGTGGATGGCACCG+GGG | + | chr5.2:35425975-35425994 | None:intergenic | 55.0% | |
| ! | CATGTCTGGGACTCCTATGG+AGG | - | chr5.2:35425559-35425578 | MS.gene95477:CDS | 55.0% |
| ! | CGGTGGTGTTAGTGGTGGTA+GGG | + | chr5.2:35424239-35424258 | None:intergenic | 55.0% |
| ! | GAGCATGTCTGGGACTCCTA+TGG | - | chr5.2:35425556-35425575 | MS.gene95477:CDS | 55.0% |
| ! | GATGTGTCTGGGAGCATGTC+TGG | - | chr5.2:35425545-35425564 | MS.gene95477:CDS | 55.0% |
| ! | GGTTTGAGCGGTGGTGTTAG+TGG | + | chr5.2:35424247-35424266 | None:intergenic | 55.0% |
| ! | GTCTGTGGCATTGGGGTTGT+TGG | - | chr5.2:35425583-35425602 | MS.gene95477:CDS | 55.0% |
| ! | TCTTTGGGGGATGGAGATGG+TGG | - | chr5.2:35425440-35425459 | MS.gene95477:CDS | 55.0% |
| ! | TTGAGCGGTGGTGTTAGTGG+TGG | + | chr5.2:35424244-35424263 | None:intergenic | 55.0% |
| !! | GACTCCTATGGAGGTGTCTG+TGG | - | chr5.2:35425568-35425587 | MS.gene95477:CDS | 55.0% |
| !! | GGATGGAGATGGTGGAGAAG+TGG | - | chr5.2:35425448-35425467 | MS.gene95477:CDS | 55.0% |
| !! | TGGAGGTGTCTGTGGCATTG+GGG | - | chr5.2:35425576-35425595 | MS.gene95477:CDS | 55.0% |
| !! | TGTGTTGGTGCCGTTGAGGA+AGG | - | chr5.2:35425214-35425233 | MS.gene95477:CDS | 55.0% |
| AGGTGGGCCAACGAGAGTGA+CGG | + | chr5.2:35424187-35424206 | None:intergenic | 60.0% | |
| CGGTACCACGAACACCACGA+AGG | + | chr5.2:35424515-35424534 | None:intergenic | 60.0% | |
| CTGATACTCAGGGCCGGTGA+TGG | + | chr5.2:35426092-35426111 | None:intergenic | 60.0% | |
| GCCATGGAAGCTGCCATCAC+CGG | - | chr5.2:35426076-35426095 | MS.gene95477:CDS | 60.0% | |
| GGTTCTACGCCGCTGCTCTA+TGG | - | chr5.2:35424553-35424572 | MS.gene95477:CDS | 60.0% | |
| ! | GCGGTGGTGTTAGTGGTGGT+AGG | + | chr5.2:35424240-35424259 | None:intergenic | 60.0% |
| ! | GGGTCTTTGGGGGATGGAGA+TGG | - | chr5.2:35425437-35425456 | MS.gene95477:CDS | 60.0% |
| !! | CCGGTGCCATCCACTCAGAA+AGG | - | chr5.2:35425974-35425993 | MS.gene95477:CDS | 60.0% |
| !! | GGTGCCGTTGAGGAAGGTGT+TGG | - | chr5.2:35425220-35425239 | MS.gene95477:CDS | 60.0% |
| ATGGCCGCCGTCACTCTCGT+TGG | - | chr5.2:35424177-35424196 | MS.gene95477:CDS | 65.0% | |
| GAGAGACTCGAAGGCCACCC+CGG | - | chr5.2:35425955-35425974 | MS.gene95477:CDS | 65.0% | |
| TGGGCCAACGAGAGTGACGG+CGG | + | chr5.2:35424184-35424203 | None:intergenic | 65.0% | |
| ! | GCCGGTGATGGCAGCTTCCA+TGG | + | chr5.2:35426080-35426099 | None:intergenic | 65.0% |
| ! | CTGAGTGGATGGCACCGGGG+TGG | + | chr5.2:35425972-35425991 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 35424177 | 35426132 | 35424177 | ID=MS.gene95477 |
| chr5.2 | mRNA | 35424177 | 35426132 | 35424177 | ID=MS.gene95477.t1;Parent=MS.gene95477 |
| chr5.2 | exon | 35424177 | 35426132 | 35424177 | ID=MS.gene95477.t1.exon1;Parent=MS.gene95477.t1 |
| chr5.2 | CDS | 35424177 | 35426132 | 35424177 | ID=cds.MS.gene95477.t1;Parent=MS.gene95477.t1 |
| Gene Sequence |
| Protein sequence |
