Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95655.t1 | XP_003623328.1 | 97.7 | 486 | 11 | 0 | 4 | 489 | 2 | 487 | 8.80E-272 | 945.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95655.t1 | Q9M6N7 | 75.8 | 484 | 103 | 4 | 8 | 489 | 4 | 475 | 3.7e-210 | 732.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95655.t1 | G7KSC5 | 97.7 | 486 | 11 | 0 | 4 | 489 | 2 | 487 | 6.3e-272 | 945.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene95655 | 0.804804 | 1.81E-49 | -1.69E-46 |
| MS.gene04920 | MS.gene95655 | 0.809176 | 2.15E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene95655 | 0.805956 | 1.04E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene95655 | 0.820377 | 7.08E-53 | -1.69E-46 |
| MS.gene049652 | MS.gene95655 | 0.81971 | 1.01E-52 | -1.69E-46 |
| MS.gene049680 | MS.gene95655 | 0.80777 | 4.30E-50 | -1.69E-46 |
| MS.gene050300 | MS.gene95655 | -0.81222 | 4.73E-51 | -1.69E-46 |
| MS.gene051699 | MS.gene95655 | 0.811132 | 8.16E-51 | -1.69E-46 |
| MS.gene051832 | MS.gene95655 | 0.814964 | 1.18E-51 | -1.69E-46 |
| MS.gene051848 | MS.gene95655 | -0.804925 | 1.71E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene95655 | 0.818053 | 2.40E-52 | -1.69E-46 |
| MS.gene052518 | MS.gene95655 | 0.804259 | 2.35E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene95655 | 0.824167 | 9.35E-54 | -1.69E-46 |
| MS.gene052685 | MS.gene95655 | 0.849539 | 3.03E-60 | -1.69E-46 |
| MS.gene052686 | MS.gene95655 | 0.81831 | 2.10E-52 | -1.69E-46 |
| MS.gene052717 | MS.gene95655 | 0.81116 | 8.04E-51 | -1.69E-46 |
| MS.gene052889 | MS.gene95655 | 0.806851 | 6.73E-50 | -1.69E-46 |
| MS.gene053094 | MS.gene95655 | 0.806782 | 6.96E-50 | -1.69E-46 |
| MS.gene053298 | MS.gene95655 | 0.821187 | 4.61E-53 | -1.69E-46 |
| MS.gene053340 | MS.gene95655 | 0.803461 | 3.45E-49 | -1.69E-46 |
| MS.gene05365 | MS.gene95655 | 0.817696 | 2.88E-52 | -1.69E-46 |
| MS.gene053963 | MS.gene95655 | 0.835924 | 1.26E-56 | -1.69E-46 |
| MS.gene054222 | MS.gene95655 | 0.84916 | 3.87E-60 | -1.69E-46 |
| MS.gene05423 | MS.gene95655 | 0.803874 | 2.83E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene95655 | 0.820698 | 5.98E-53 | -1.69E-46 |
| MS.gene054893 | MS.gene95655 | 0.813778 | 2.15E-51 | -1.69E-46 |
| MS.gene055141 | MS.gene95655 | 0.827246 | 1.74E-54 | -1.69E-46 |
| MS.gene055229 | MS.gene95655 | 0.807309 | 5.38E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene95655 | 0.801065 | 1.07E-48 | -1.69E-46 |
| MS.gene055555 | MS.gene95655 | 0.807172 | 5.76E-50 | -1.69E-46 |
| MS.gene05636 | MS.gene95655 | 0.819009 | 1.45E-52 | -1.69E-46 |
| MS.gene056677 | MS.gene95655 | 0.805199 | 1.50E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene95655 | 0.804368 | 2.23E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene95655 | 0.800485 | 1.41E-48 | -1.69E-46 |
| MS.gene057102 | MS.gene95655 | 0.866062 | 3.75E-65 | -1.69E-46 |
| MS.gene058159 | MS.gene95655 | 0.828676 | 7.88E-55 | -1.69E-46 |
| MS.gene058279 | MS.gene95655 | 0.811436 | 7.01E-51 | -1.69E-46 |
| MS.gene058592 | MS.gene95655 | 0.802946 | 4.41E-49 | -1.69E-46 |
| MS.gene058635 | MS.gene95655 | 0.801196 | 1.01E-48 | -1.69E-46 |
| MS.gene059051 | MS.gene95655 | 0.803855 | 2.86E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene95655 | 0.802577 | 5.25E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene95655 | 0.837991 | 3.75E-57 | -1.69E-46 |
| MS.gene059774 | MS.gene95655 | 0.850345 | 1.80E-60 | -1.69E-46 |
| MS.gene05985 | MS.gene95655 | -0.844662 | 6.58E-59 | -1.69E-46 |
| MS.gene059935 | MS.gene95655 | 0.813793 | 2.14E-51 | -1.69E-46 |
| MS.gene060012 | MS.gene95655 | 0.825238 | 5.23E-54 | -1.69E-46 |
| MS.gene060412 | MS.gene95655 | 0.800472 | 1.42E-48 | -1.69E-46 |
| MS.gene060697 | MS.gene95655 | 0.847556 | 1.07E-59 | -1.69E-46 |
| MS.gene060777 | MS.gene95655 | 0.80187 | 7.34E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene95655 | 0.807464 | 4.99E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene95655 | 0.804142 | 2.49E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene95655 | 0.816363 | 5.75E-52 | -1.69E-46 |
| MS.gene061047 | MS.gene95655 | 0.809065 | 2.27E-50 | -1.69E-46 |
| MS.gene061188 | MS.gene95655 | 0.850361 | 1.78E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95655.t1 | MTR_7g069640 | 97.737 | 486 | 11 | 0 | 4 | 489 | 2 | 487 | 0.0 | 958 |
| MS.gene95655.t1 | MTR_4g017820 | 85.507 | 483 | 68 | 2 | 8 | 489 | 6 | 487 | 0.0 | 800 |
| MS.gene95655.t1 | MTR_8g095040 | 75.216 | 464 | 109 | 2 | 17 | 475 | 22 | 484 | 0.0 | 665 |
| MS.gene95655.t1 | MTR_1g036410 | 61.523 | 486 | 158 | 5 | 14 | 489 | 14 | 480 | 0.0 | 572 |
| MS.gene95655.t1 | MTR_8g074750 | 59.756 | 492 | 159 | 8 | 6 | 483 | 5 | 471 | 0.0 | 553 |
| MS.gene95655.t1 | MTR_7g115050 | 55.150 | 466 | 177 | 6 | 16 | 468 | 13 | 459 | 2.12e-180 | 514 |
| MS.gene95655.t1 | MTR_1g045550 | 25.478 | 471 | 288 | 12 | 24 | 464 | 48 | 485 | 1.39e-23 | 103 |
| MS.gene95655.t1 | MTR_1g079760 | 25.866 | 491 | 293 | 15 | 24 | 477 | 47 | 503 | 8.28e-20 | 92.8 |
| MS.gene95655.t1 | MTR_7g113340 | 24.524 | 473 | 291 | 13 | 24 | 464 | 47 | 485 | 5.21e-17 | 84.0 |
| MS.gene95655.t1 | MTR_3g463730 | 25.532 | 470 | 257 | 16 | 42 | 467 | 31 | 451 | 8.29e-16 | 80.1 |
| MS.gene95655.t1 | MTR_7g098930 | 22.774 | 483 | 291 | 11 | 24 | 466 | 47 | 487 | 2.06e-15 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95655.t1 | AT2G38290 | 75.826 | 484 | 103 | 4 | 8 | 489 | 4 | 475 | 0.0 | 721 |
| MS.gene95655.t1 | AT2G38290 | 77.994 | 359 | 77 | 2 | 133 | 489 | 1 | 359 | 0.0 | 552 |
| MS.gene95655.t1 | AT3G24300 | 24.948 | 481 | 285 | 13 | 24 | 467 | 46 | 487 | 6.90e-22 | 99.0 |
| MS.gene95655.t1 | AT4G13510 | 25.625 | 480 | 277 | 14 | 24 | 464 | 42 | 480 | 9.83e-22 | 98.6 |
| MS.gene95655.t1 | AT1G64780 | 26.144 | 459 | 279 | 12 | 24 | 452 | 52 | 480 | 1.34e-21 | 98.2 |
| MS.gene95655.t1 | AT3G24290 | 26.940 | 464 | 264 | 15 | 24 | 451 | 46 | 470 | 1.75e-21 | 97.8 |
| MS.gene95655.t1 | AT4G28700 | 25.301 | 498 | 282 | 16 | 24 | 475 | 51 | 504 | 4.54e-20 | 93.6 |
Find 121 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGTGATTGGAGCTGTTC+AGG | 0.196275 | 7.4:+34093808 | MS.gene95655:CDS |
| CGAGGAAGCTTATGCTCTTT+GGG | 0.212991 | 7.4:+34096908 | MS.gene95655:CDS |
| TATGTTATTCATCTTTCTTC+TGG | 0.220707 | 7.4:+34092513 | MS.gene95655:CDS |
| CTGGTTTCACTGCTGCTTAT+TGG | 0.234954 | 7.4:+34092541 | MS.gene95655:CDS |
| TTGTTGGCTGGTTCTGTTCT+TGG | 0.237579 | 7.4:+34092360 | MS.gene95655:CDS |
| ACATGCTGTGGCTGGCCTAT+TGG | 0.253905 | 7.4:+34096638 | MS.gene95655:CDS |
| CATGCTGTGGCTGGCCTATT+GGG | 0.258730 | 7.4:+34096639 | MS.gene95655:CDS |
| GCGAGGAAGCTTATGCTCTT+TGG | 0.267420 | 7.4:+34096907 | MS.gene95655:CDS |
| GTGGTGGATTTCTTTATCAT+TGG | 0.270317 | 7.4:+34092466 | MS.gene95655:CDS |
| CATCTTTCTTCTGGAATTGC+TGG | 0.270523 | 7.4:+34092522 | MS.gene95655:CDS |
| GGTAAAGGTGCACCAGCTTT+AGG | 0.272696 | 7.4:+34092186 | MS.gene95655:CDS |
| TTTGGGAAGCCTTCTGTGAT+TGG | 0.274978 | 7.4:+34093797 | MS.gene95655:CDS |
| TGGTTTCACTGCTGCTTATT+GGG | 0.280966 | 7.4:+34092542 | MS.gene95655:CDS |
| TGGGGTGTGATTGATTATTC+TGG | 0.285196 | 7.4:+34092486 | MS.gene95655:CDS |
| GTGGCAGCAATGTTTGTTAT+TGG | 0.287336 | 7.4:+34096780 | MS.gene95655:CDS |
| TTGTTATGGATGGGTTGGTC+AGG | 0.288183 | 7.4:+34093659 | MS.gene95655:CDS |
| TGGTGGATTTCTTTATCATT+GGG | 0.295425 | 7.4:+34092467 | MS.gene95655:CDS |
| TTGCTGATGCTTGCAGGTGC+TGG | 0.322741 | 7.4:+34093635 | MS.gene95655:CDS |
| TCTTGGAAGGATGAATATTA+AGG | 0.326988 | 7.4:+34092377 | MS.gene95655:CDS |
| GGCAGTGAATTCAGCTTTCA+TGG | 0.342800 | 7.4:+34092077 | MS.gene95655:CDS |
| GTTGCTTATAGAATGGCTTT+TGG | 0.349898 | 7.4:+34092141 | MS.gene95655:CDS |
| TCCCTATCACTCTTTATCCT+TGG | 0.350780 | 7.4:-34093590 | None:intergenic |
| AATTCAAGGGGTGCATTCTA+TGG | 0.355468 | 7.4:+34096723 | MS.gene95655:CDS |
| GGTTCTTGTTGCTTATAGAA+TGG | 0.366948 | 7.4:+34092134 | MS.gene95655:CDS |
| GTAAAGGTGCACCAGCTTTA+GGG | 0.372536 | 7.4:+34092187 | MS.gene95655:CDS |
| AGCATCAGCAACACATTGTT+TGG | 0.375545 | 7.4:-34093623 | None:intergenic |
| TTCTATCTGGGAGCATTCCT+TGG | 0.377365 | 7.4:+34094849 | MS.gene95655:CDS |
| GGAGTGTCACCTTATGTTAA+TGG | 0.386336 | 7.4:+34096987 | MS.gene95655:CDS |
| TTGTAATAGTGAGTACTTGC+AGG | 0.400657 | 7.4:-34092240 | None:intergenic |
| GGAAGATGTGTTTGGTATGC+TGG | 0.402564 | 7.4:-34091931 | None:intergenic |
| TCTCCTTTGTTTAGCCATGC+TGG | 0.405364 | 7.4:-34091961 | None:intergenic |
| TGGTGATGCTGCTGCTGCCA+TGG | 0.410499 | 7.4:-34091911 | None:intergenic |
| ATTGTGATGGGAATTCTATC+TGG | 0.411310 | 7.4:+34094836 | MS.gene95655:CDS |
| TCTGTGATTGGAGCTGTTCA+GGG | 0.412166 | 7.4:+34093809 | MS.gene95655:CDS |
| AATGTGTTGCTGATGCTTGC+AGG | 0.420148 | 7.4:+34093629 | MS.gene95655:CDS |
| CTATTGGGTGGCCTACTAAC+AGG | 0.422381 | 7.4:+34096654 | MS.gene95655:CDS |
| GACCAAGGATAAAGAGTGAT+AGG | 0.433065 | 7.4:+34093588 | MS.gene95655:CDS |
| ATGCATATATTACCTGCTCC+TGG | 0.434228 | 7.4:-34093860 | None:intergenic |
| ACAATTCCTAAAACAATTAG+TGG | 0.438994 | 7.4:+34096761 | MS.gene95655:CDS |
| TGCATATATTACCTGCTCCT+GGG | 0.440089 | 7.4:-34093859 | None:intergenic |
| TTGCAGGTGCTGGATTGTTA+TGG | 0.443343 | 7.4:+34093645 | MS.gene95655:CDS |
| CCGATTTCGAGCTGCTCGTC+GGG | 0.444465 | 7.4:-34096867 | None:intergenic |
| CCCGACGAGCAGCTCGAAAT+CGG | 0.445687 | 7.4:+34096867 | MS.gene95655:CDS |
| AAAGTCAAGTCTTCTGCAAA+AGG | 0.451410 | 7.4:+34094895 | MS.gene95655:CDS |
| AGGCATGGTTCGTTGAATAC+TGG | 0.453886 | 7.4:+34096957 | MS.gene95655:CDS |
| TGTTATGGATGGGTTGGTCA+GGG | 0.456410 | 7.4:+34093660 | MS.gene95655:CDS |
| GCTTATGCTCTTTGGGGTGA+TGG | 0.459611 | 7.4:+34096915 | MS.gene95655:CDS |
| CTGGATTGTTATGGATGGGT+TGG | 0.463522 | 7.4:+34093654 | MS.gene95655:CDS |
| TTAAAGGTTGATGACACTCT+TGG | 0.466912 | 7.4:+34096603 | MS.gene95655:intron |
| TGGCTGGTTCTGTTCTTGGA+AGG | 0.468383 | 7.4:+34092364 | MS.gene95655:CDS |
| GATGAATATTAAGGCTTGGA+TGG | 0.479738 | 7.4:+34092386 | MS.gene95655:CDS |
| CTGCTCGTCGGGCATCCTCA+AGG | 0.482168 | 7.4:-34096856 | None:intergenic |
| CTGCAAGGAGTCCTGTTAGT+AGG | 0.485260 | 7.4:-34096665 | None:intergenic |
| GAAGGATGAATATTAAGGCT+TGG | 0.494792 | 7.4:+34092382 | MS.gene95655:CDS |
| AGGTGCTGGATTGTTATGGA+TGG | 0.496148 | 7.4:+34093649 | MS.gene95655:CDS |
| GTGATGTTGGAAGATGTGTT+TGG | 0.502897 | 7.4:-34091939 | None:intergenic |
| TTTAGCCATGCTGGTGATGT+TGG | 0.504620 | 7.4:-34091952 | None:intergenic |
| CTGTTAGTAGGCCACCCAAT+AGG | 0.508793 | 7.4:-34096653 | None:intergenic |
| ATGGGTTGGTCAGGGTTCAA+TGG | 0.509849 | 7.4:+34093668 | MS.gene95655:CDS |
| GATGCAACATTTGCTGCATA+TGG | 0.511907 | 7.4:-34093698 | None:intergenic |
| GCATAGAGAATTACTAGTCC+TGG | 0.516086 | 7.4:-34092033 | None:intergenic |
| CAGCAATGTTTGTTATTGGA+TGG | 0.518720 | 7.4:+34096784 | MS.gene95655:CDS |
| TATTACCAGTGACAAATTCA+AGG | 0.518978 | 7.4:+34096709 | MS.gene95655:CDS |
| TTCAACGAACCATGCCTAGT+TGG | 0.519712 | 7.4:-34096951 | None:intergenic |
| ATGTAGGGCTTGTGCAATCG+TGG | 0.521283 | 7.4:+34094807 | MS.gene95655:intron |
| TTTCACACACATGCTGTGGC+TGG | 0.523309 | 7.4:+34096630 | MS.gene95655:CDS |
| ACCGATTTCGAGCTGCTCGT+CGG | 0.525216 | 7.4:-34096868 | None:intergenic |
| GTATGTATCACCCCAGGAGC+AGG | 0.525866 | 7.4:+34093848 | MS.gene95655:CDS |
| GTTGGTCTACAAAGCATGCC+AGG | 0.526287 | 7.4:+34092015 | MS.gene95655:CDS |
| GGTGCATTCTATGGTGGAAG+TGG | 0.527159 | 7.4:+34096732 | MS.gene95655:CDS |
| CCTCTTGCACCATTAACATA+AGG | 0.528402 | 7.4:-34096996 | None:intergenic |
| GGTTGGTCAGGGTTCAATGG+TGG | 0.529011 | 7.4:+34093671 | MS.gene95655:CDS |
| ATCGGTGATGATGCGGCTCA+CGG | 0.529577 | 7.4:+34096885 | MS.gene95655:CDS |
| GCATTCTATGGTGGAAGTGG+TGG | 0.530052 | 7.4:+34096735 | MS.gene95655:CDS |
| AATAGTAATCTACAAAGGGC+TGG | 0.532579 | 7.4:-34096690 | None:intergenic |
| ATGACAGCAGCAACACTAGT+TGG | 0.538801 | 7.4:+34091997 | MS.gene95655:CDS |
| GCACCCCTTGAATTTGTCAC+TGG | 0.539379 | 7.4:-34096714 | None:intergenic |
| TGGTAATAGTAATCTACAAA+GGG | 0.541630 | 7.4:-34096694 | None:intergenic |
| GCTGTTCAGGGTATGATGAC+TGG | 0.543025 | 7.4:+34093821 | MS.gene95655:CDS |
| ATTACCAGTGACAAATTCAA+GGG | 0.543496 | 7.4:+34096710 | MS.gene95655:CDS |
| TTGTGATGGGAATTCTATCT+GGG | 0.549743 | 7.4:+34094837 | MS.gene95655:CDS |
| CTGGTAATAGTAATCTACAA+AGG | 0.549936 | 7.4:-34096695 | None:intergenic |
| ATCGTGGGCGGCTATTGTGA+TGG | 0.560238 | 7.4:+34094823 | MS.gene95655:CDS |
| GGTGGATTTCTTTATCATTG+GGG | 0.564219 | 7.4:+34092468 | MS.gene95655:CDS |
| TCGTGGGCGGCTATTGTGAT+GGG | 0.566243 | 7.4:+34094824 | MS.gene95655:CDS |
| TGCTCGTCGGGCATCCTCAA+GGG | 0.567146 | 7.4:-34096855 | None:intergenic |
| GGATAAAGAGTGATAGGGAA+AGG | 0.577138 | 7.4:+34093594 | MS.gene95655:CDS |
| ATCAGCAACACATTGTTTGG+TGG | 0.581081 | 7.4:-34093620 | None:intergenic |
| TACAAAGGGCTGGCTCTGCA+AGG | 0.581821 | 7.4:-34096680 | None:intergenic |
| AAATATGATCCAACTAGGCA+TGG | 0.582321 | 7.4:+34096942 | MS.gene95655:CDS |
| GAGGAAGCTTATGCTCTTTG+GGG | 0.587502 | 7.4:+34096909 | MS.gene95655:CDS |
| CCTTATGTTAATGGTGCAAG+AGG | 0.587708 | 7.4:+34096996 | MS.gene95655:CDS |
| ACCAAGGATAAAGAGTGATA+GGG | 0.587771 | 7.4:+34093589 | MS.gene95655:CDS |
| CAGCAACTAGTCTTCTTGTG+TGG | 0.591340 | 7.4:+34093753 | MS.gene95655:CDS |
| TGTAGGGCTTGTGCAATCGT+GGG | 0.592002 | 7.4:+34094808 | MS.gene95655:intron |
| GGTGCTGGATTGTTATGGAT+GGG | 0.594178 | 7.4:+34093650 | MS.gene95655:CDS |
| AAATAAACAAGTGAAGCCAT+AGG | 0.597753 | 7.4:-34092306 | None:intergenic |
| GGTGTGATTGATTATTCTGG+TGG | 0.603295 | 7.4:+34092489 | MS.gene95655:CDS |
| TATAACAAGGAGAATGATTG+TGG | 0.603882 | 7.4:-34096820 | None:intergenic |
| GCTGTGGCTGGCCTATTGGG+TGG | 0.604590 | 7.4:+34096642 | MS.gene95655:CDS |
| TCGTTGAATACTGGTAACAC+TGG | 0.616643 | 7.4:+34096966 | MS.gene95655:CDS |
| GGTGCACCTTTACCCCAGAA+AGG | 0.618916 | 7.4:-34092177 | None:intergenic |
| GCTCGAAATCGGTGATGATG+CGG | 0.620137 | 7.4:+34096878 | MS.gene95655:CDS |
| GCATATATTACCTGCTCCTG+GGG | 0.620373 | 7.4:-34093858 | None:intergenic |
| TGAACAGCTCCAATCACAGA+AGG | 0.622407 | 7.4:-34093806 | None:intergenic |
| ATCTTCCAACATCACCAGCA+TGG | 0.625038 | 7.4:+34091947 | MS.gene95655:CDS |
| TCAAGGGGTGCATTCTATGG+TGG | 0.628215 | 7.4:+34096726 | MS.gene95655:CDS |
| GTATGAATAGTTGTATAACA+AGG | 0.633966 | 7.4:-34096833 | None:intergenic |
| AACAAGGAGAATGATTGTGG+TGG | 0.634525 | 7.4:-34096817 | None:intergenic |
| TGATGTTGTTGAAACACCAA+TGG | 0.638088 | 7.4:+34092269 | MS.gene95655:CDS |
| GGACTTGTATGTATCACCCC+AGG | 0.638350 | 7.4:+34093842 | MS.gene95655:CDS |
| AAAGAAAACAACATCAAGAG+AGG | 0.638741 | 7.4:-34093777 | None:intergenic |
| AGGGCTTGTGCAATCGTGGG+CGG | 0.644338 | 7.4:+34094811 | MS.gene95655:intron |
| TACAACTATTCATACCCTTG+AGG | 0.649090 | 7.4:+34096841 | MS.gene95655:CDS |
| TGATGATGCGGCTCACGGCG+AGG | 0.657877 | 7.4:+34096890 | MS.gene95655:CDS |
| TAAACAAAGGAGACAACGCA+TGG | 0.662515 | 7.4:+34091971 | MS.gene95655:CDS |
| TCACCAGCATGGCTAAACAA+AGG | 0.671383 | 7.4:+34091958 | MS.gene95655:CDS |
| AAGATCATCATGGAGAACCA+AGG | 0.681910 | 7.4:-34094866 | None:intergenic |
| TATATGTGCAGGTTGGACCA+AGG | 0.684331 | 7.4:+34093573 | MS.gene95655:intron |
| AGTATTTCACACACATGCTG+TGG | 0.697237 | 7.4:+34096626 | MS.gene95655:CDS |
| TTACCAGTGACAAATTCAAG+GGG | 0.721655 | 7.4:+34096711 | MS.gene95655:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATAAAAAAAATTACA+TGG | - | chr7.4:34095957-34095976 | None:intergenic | 10.0% |
| !! | ATAAATTATGAAAGATTAAT+TGG | - | chr7.4:34093356-34093375 | None:intergenic | 10.0% |
| !! | ATTAAATTCATATTTCAATT+GGG | - | chr7.4:34094501-34094520 | None:intergenic | 10.0% |
| !! | TATTAAATTCATATTTCAAT+TGG | - | chr7.4:34094502-34094521 | None:intergenic | 10.0% |
| !! | TTAAAAGAAAATATATGAAA+AGG | + | chr7.4:34095638-34095657 | MS.gene95655:intron | 10.0% |
| !!! | AATTTTTTTTATTTGTTTCA+GGG | + | chr7.4:34095960-34095979 | MS.gene95655:intron | 10.0% |
| !!! | TAATTTTTTTTATTTGTTTC+AGG | + | chr7.4:34095959-34095978 | MS.gene95655:intron | 10.0% |
| !!! | TATTTTCATTTTTTTTTTGA+AGG | - | chr7.4:34095705-34095724 | None:intergenic | 10.0% |
| !! | ATAAATACCTAGAAAATATA+CGG | - | chr7.4:34093505-34093524 | None:intergenic | 15.0% |
| !! | ATCAAAAATATTCACTAAAT+TGG | + | chr7.4:34094623-34094642 | MS.gene95655:intron | 15.0% |
| !! | ATTACAAGAATAATATTTGT+TGG | + | chr7.4:34094667-34094686 | MS.gene95655:intron | 15.0% |
| !! | GTATAGAGTAATAATATATT+GGG | + | chr7.4:34095263-34095282 | MS.gene95655:intron | 15.0% |
| !! | TAATTTAATACCATTCATTA+AGG | + | chr7.4:34096387-34096406 | MS.gene95655:intron | 15.0% |
| !! | TGTATAGAGTAATAATATAT+TGG | + | chr7.4:34095262-34095281 | MS.gene95655:intron | 15.0% |
| !! | TTAAATTCATATTTCAATTG+GGG | - | chr7.4:34094500-34094519 | None:intergenic | 15.0% |
| !! | TTACAAGAATAATATTTGTT+GGG | + | chr7.4:34094668-34094687 | MS.gene95655:intron | 15.0% |
| !! | TTATAACGAAAGATATTAAA+AGG | + | chr7.4:34092800-34092819 | MS.gene95655:intron | 15.0% |
| !! | TTATATTAATTATAAGAAGG+AGG | - | chr7.4:34095615-34095634 | None:intergenic | 15.0% |
| !! | TTTAAGCAAAATTAGATAAA+GGG | - | chr7.4:34092623-34092642 | None:intergenic | 15.0% |
| !!! | AAATGAACAAAATTTGATTT+TGG | - | chr7.4:34096125-34096144 | None:intergenic | 15.0% |
| !!! | AAGTAAGTTTTTTTTTTCTA+GGG | + | chr7.4:34095831-34095850 | MS.gene95655:intron | 15.0% |
| !!! | AATTTTGCTTAAAAACTTAA+AGG | + | chr7.4:34092630-34092649 | MS.gene95655:intron | 15.0% |
| !!! | AGTATAGCTTAATTATATTT+TGG | + | chr7.4:34094974-34094993 | MS.gene95655:intron | 15.0% |
| !!! | ATTTTGCTTAAAAACTTAAA+GGG | + | chr7.4:34092631-34092650 | MS.gene95655:intron | 15.0% |
| !!! | GTGTTTTTAATATAAAAAAG+AGG | - | chr7.4:34096024-34096043 | None:intergenic | 15.0% |
| !!! | TATTTATTTTTTAAACCTTG+AGG | - | chr7.4:34094568-34094587 | None:intergenic | 15.0% |
| !!! | TTTTAAGCAAAATTAGATAA+AGG | - | chr7.4:34092624-34092643 | None:intergenic | 15.0% |
| !!! | TTTTTTGAAAGAAAATGATA+GGG | + | chr7.4:34095039-34095058 | MS.gene95655:intron | 15.0% |
| !!! | TTTTTTTGAAAGAAAATGAT+AGG | + | chr7.4:34095038-34095057 | MS.gene95655:intron | 15.0% |
| !! | ATCAATTGTTATGACTTAAA+CGG | - | chr7.4:34094123-34094142 | None:intergenic | 20.0% |
| !! | ATCACAAATAACAAGTTTAA+AGG | + | chr7.4:34096419-34096438 | MS.gene95655:intron | 20.0% |
| !! | ATCTATAAATTAATTGCCAT+TGG | + | chr7.4:34093151-34093170 | MS.gene95655:intron | 20.0% |
| !! | TAGTCAATTTATCAAAATCA+CGG | + | chr7.4:34094289-34094308 | MS.gene95655:intron | 20.0% |
| !! | TGTTTAAAAAAGAATGAAAG+TGG | - | chr7.4:34095550-34095569 | None:intergenic | 20.0% |
| !! | TTAGAACTTCAATAAAATTG+TGG | - | chr7.4:34094320-34094339 | None:intergenic | 20.0% |
| !! | TTTAAGCAAAATTAGATGAA+GGG | - | chr7.4:34092716-34092735 | None:intergenic | 20.0% |
| !!! | AAAAAAAGCACAACAAATTA+AGG | - | chr7.4:34096579-34096598 | None:intergenic | 20.0% |
| !!! | AGTAATTCTTTTGAATGATA+GGG | + | chr7.4:34095010-34095029 | MS.gene95655:intron | 20.0% |
| !!! | CAATTTTTCAACATTAAACA+AGG | - | chr7.4:34095466-34095485 | None:intergenic | 20.0% |
| !!! | CTTATTTTTTCTTATACTGT+TGG | + | chr7.4:34092426-34092445 | MS.gene95655:CDS | 20.0% |
| !!! | CTTTCATTCTTTTTTAAACA+AGG | + | chr7.4:34095550-34095569 | MS.gene95655:intron | 20.0% |
| !!! | GAAGTAAGTTTTTTTTTTCT+AGG | + | chr7.4:34095830-34095849 | MS.gene95655:intron | 20.0% |
| !!! | TAGTAATTCTTTTGAATGAT+AGG | + | chr7.4:34095009-34095028 | MS.gene95655:intron | 20.0% |
| !!! | TCATTTTTGGTATAGAAATT+TGG | + | chr7.4:34093525-34093544 | MS.gene95655:intron | 20.0% |
| !!! | TCTAGGTATTTATTCATTTT+TGG | + | chr7.4:34093512-34093531 | MS.gene95655:intron | 20.0% |
| !!! | TGTGCTTTTTTTTGTATTAA+AGG | + | chr7.4:34096587-34096606 | MS.gene95655:intron | 20.0% |
| !!! | TTCATCTAATTTTGCTTAAA+AGG | + | chr7.4:34092716-34092735 | MS.gene95655:intron | 20.0% |
| !!! | TTTTAAGCAAAATTAGATGA+AGG | - | chr7.4:34092717-34092736 | None:intergenic | 20.0% |
| !!! | TTTTTGAAAGAAAATGATAG+GGG | + | chr7.4:34095040-34095059 | MS.gene95655:intron | 20.0% |
| ! | AAAAGAAAGTTGTTGGAATT+TGG | - | chr7.4:34095518-34095537 | None:intergenic | 25.0% |
| ! | AACCTTTCTTTCATCAATTT+GGG | + | chr7.4:34092570-34092589 | MS.gene95655:intron | 25.0% |
| ! | AAGCATAGTGAAAAAGAAAT+GGG | + | chr7.4:34092056-34092075 | MS.gene95655:CDS | 25.0% |
| ! | ACAATTCCTAAAACAATTAG+TGG | + | chr7.4:34096761-34096780 | MS.gene95655:CDS | 25.0% |
| ! | ACATATGAATGTATGATGAA+AGG | - | chr7.4:34092664-34092683 | None:intergenic | 25.0% |
| ! | ATAAAACCAGCAAAAGAAAT+TGG | + | chr7.4:34095930-34095949 | MS.gene95655:intron | 25.0% |
| ! | ATAAGTGCTTATCATGAAAA+GGG | + | chr7.4:34092759-34092778 | MS.gene95655:intron | 25.0% |
| ! | ATGAAAGATTAATTGGTTGA+TGG | - | chr7.4:34093349-34093368 | None:intergenic | 25.0% |
| ! | ATTTACTCTGTTTGTATTCA+CGG | - | chr7.4:34094394-34094413 | None:intergenic | 25.0% |
| ! | CACAATGTAATTGCAATTAT+AGG | - | chr7.4:34093226-34093245 | None:intergenic | 25.0% |
| ! | CATAAGAAAAAGAAAGTTGT+TGG | - | chr7.4:34095525-34095544 | None:intergenic | 25.0% |
| ! | GAATAGAAACTCATTTAAGT+TGG | + | chr7.4:34094528-34094547 | MS.gene95655:intron | 25.0% |
| ! | GAATTGTATTTAAGTCTTGA+GGG | + | chr7.4:34094053-34094072 | MS.gene95655:intron | 25.0% |
| ! | GAGTAATAATATATTGGGAT+TGG | + | chr7.4:34095268-34095287 | MS.gene95655:intron | 25.0% |
| ! | GTATGAATAGTTGTATAACA+AGG | - | chr7.4:34096836-34096855 | None:intergenic | 25.0% |
| ! | TAACCTTTCTTTCATCAATT+TGG | + | chr7.4:34092569-34092588 | MS.gene95655:intron | 25.0% |
| ! | TAAGAAAAAATAAGCCAAAG+AGG | - | chr7.4:34092420-34092439 | None:intergenic | 25.0% |
| ! | TATAAATTAATTGCCATTGG+TGG | + | chr7.4:34093154-34093173 | MS.gene95655:intron | 25.0% |
| ! | TATGTTATTCATCTTTCTTC+TGG | + | chr7.4:34092513-34092532 | MS.gene95655:CDS | 25.0% |
| ! | TGAAAACAAATTATATGTGC+AGG | + | chr7.4:34093562-34093581 | MS.gene95655:intron | 25.0% |
| ! | TGAATTGTATTTAAGTCTTG+AGG | + | chr7.4:34094052-34094071 | MS.gene95655:intron | 25.0% |
| ! | TGGTAATAGTAATCTACAAA+GGG | - | chr7.4:34096697-34096716 | None:intergenic | 25.0% |
| ! | TTATGACTTAAACTCAAAAG+AGG | - | chr7.4:34094466-34094485 | None:intergenic | 25.0% |
| ! | TTGTTGACAATTAATGTGAA+TGG | + | chr7.4:34094772-34094791 | MS.gene95655:intron | 25.0% |
| ! | TTTAAGCAAAATTAGACGAA+TGG | - | chr7.4:34093046-34093065 | None:intergenic | 25.0% |
| !! | AATTTTGCTTAAAAGCTTAG+AGG | + | chr7.4:34093053-34093072 | MS.gene95655:intron | 25.0% |
| !! | ATACTAACAAAAAGTACAGT+AGG | + | chr7.4:34094708-34094727 | MS.gene95655:intron | 25.0% |
| !! | ATTTTGCTTAAAAGCTTAGA+GGG | + | chr7.4:34093054-34093073 | MS.gene95655:intron | 25.0% |
| !! | CAACAACTTTCTTTTTCTTA+TGG | + | chr7.4:34095523-34095542 | MS.gene95655:intron | 25.0% |
| !! | CATTTAAAACTTCAATACTG+TGG | + | chr7.4:34093272-34093291 | MS.gene95655:intron | 25.0% |
| !! | GTAATTCTTTTGAATGATAG+GGG | + | chr7.4:34095011-34095030 | MS.gene95655:intron | 25.0% |
| !! | TGCTATTACTATGATTTTGT+TGG | + | chr7.4:34092344-34092363 | MS.gene95655:CDS | 25.0% |
| !! | TTGGAATTTGGAATCAATAT+TGG | - | chr7.4:34095506-34095525 | None:intergenic | 25.0% |
| !!! | ATTTCTTTTGCTGGTTTTAT+AGG | - | chr7.4:34095930-34095949 | None:intergenic | 25.0% |
| !!! | TAGTTTGAAATTTTGTGTGA+TGG | - | chr7.4:34096292-34096311 | None:intergenic | 25.0% |
| !!! | TTATTTTTTAAACCTTGAGG+AGG | - | chr7.4:34094565-34094584 | None:intergenic | 25.0% |
| !!! | TTTTTATTTGTTTCAGGGTA+TGG | + | chr7.4:34095965-34095984 | MS.gene95655:intron | 25.0% |
| AAAGAAAACAACATCAAGAG+AGG | - | chr7.4:34093780-34093799 | None:intergenic | 30.0% | |
| AAATAAACAAGTGAAGCCAT+AGG | - | chr7.4:34092309-34092328 | None:intergenic | 30.0% | |
| AACAAATTATATGTGCAGGT+TGG | + | chr7.4:34093566-34093585 | MS.gene95655:intron | 30.0% | |
| AAGTCGTCAAAAAGTGAAAA+AGG | + | chr7.4:34094223-34094242 | MS.gene95655:intron | 30.0% | |
| AATTATAAGAAGGAGGATGA+AGG | - | chr7.4:34095608-34095627 | None:intergenic | 30.0% | |
| ACCAAAATGATTAGACACAA+TGG | - | chr7.4:34096350-34096369 | None:intergenic | 30.0% | |
| ACTCAAAAGAGGCAAATTTA+AGG | - | chr7.4:34094455-34094474 | None:intergenic | 30.0% | |
| AGTCGTCAAAAAGTGAAAAA+GGG | + | chr7.4:34094224-34094243 | MS.gene95655:intron | 30.0% | |
| ATGAATGTATGATGAAAGGA+AGG | - | chr7.4:34092660-34092679 | None:intergenic | 30.0% | |
| ATGCATCACTTTCTTATTGT+AGG | + | chr7.4:34093877-34093896 | MS.gene95655:intron | 30.0% | |
| ATTACCAGTGACAAATTCAA+GGG | + | chr7.4:34096710-34096729 | MS.gene95655:CDS | 30.0% | |
| CAAGCATAGTGAAAAAGAAA+TGG | + | chr7.4:34092055-34092074 | MS.gene95655:CDS | 30.0% | |
| CAATGTTAAGGATGAAGTTT+GGG | + | chr7.4:34095403-34095422 | MS.gene95655:intron | 30.0% | |
| CAATTCAACCACATGAAAAA+GGG | - | chr7.4:34093086-34093105 | None:intergenic | 30.0% | |
| CAATTTGGACAAATTTCGAA+CGG | + | chr7.4:34092963-34092982 | MS.gene95655:intron | 30.0% | |
| CATAAGTGCTTATCATGAAA+AGG | + | chr7.4:34092758-34092777 | MS.gene95655:intron | 30.0% | |
| CTCAAAAGAGGCAAATTTAA+GGG | - | chr7.4:34094454-34094473 | None:intergenic | 30.0% | |
| CTGGTAATAGTAATCTACAA+AGG | - | chr7.4:34096698-34096717 | None:intergenic | 30.0% | |
| GAGAAAAATATGATCCAACT+AGG | + | chr7.4:34096937-34096956 | MS.gene95655:CDS | 30.0% | |
| GAGTTCAAGAAATGTTAGAT+AGG | - | chr7.4:34096185-34096204 | None:intergenic | 30.0% | |
| GATAAATGATCGCGAAATAA+CGG | - | chr7.4:34096535-34096554 | None:intergenic | 30.0% | |
| GATAAATGATCGCGAAATTA+AGG | - | chr7.4:34096557-34096576 | None:intergenic | 30.0% | |
| GCTATACTATATTTAGTGAG+TGG | - | chr7.4:34094962-34094981 | None:intergenic | 30.0% | |
| GTAGATCACTAACTACTAAT+AGG | + | chr7.4:34094194-34094213 | MS.gene95655:intron | 30.0% | |
| GTAGTAACATTCCAATGTTA+AGG | + | chr7.4:34095391-34095410 | MS.gene95655:intron | 30.0% | |
| TAAGCTCAAGTAAGTCAATT+TGG | + | chr7.4:34092948-34092967 | MS.gene95655:intron | 30.0% | |
| TACCCAAATTGATGAAAGAA+AGG | - | chr7.4:34092575-34092594 | None:intergenic | 30.0% | |
| TATAACAAGGAGAATGATTG+TGG | - | chr7.4:34096823-34096842 | None:intergenic | 30.0% | |
| TATACATGAATAGTTGCCTA+AGG | + | chr7.4:34095369-34095388 | MS.gene95655:intron | 30.0% | |
| TATTACCAGTGACAAATTCA+AGG | + | chr7.4:34096709-34096728 | MS.gene95655:CDS | 30.0% | |
| TCAAAAGAGGCAAATTTAAG+GGG | - | chr7.4:34094453-34094472 | None:intergenic | 30.0% | |
| TCAATTCAACCACATGAAAA+AGG | - | chr7.4:34093087-34093106 | None:intergenic | 30.0% | |
| TCAATTTATCAAAATCACGG+TGG | + | chr7.4:34094292-34094311 | MS.gene95655:intron | 30.0% | |
| TCTTGGAAGGATGAATATTA+AGG | + | chr7.4:34092377-34092396 | MS.gene95655:CDS | 30.0% | |
| TGAATGTATGATGAAAGGAA+GGG | - | chr7.4:34092659-34092678 | None:intergenic | 30.0% | |
| TTACGAAAAGAGTTGCTTAT+AGG | + | chr7.4:34094162-34094181 | MS.gene95655:intron | 30.0% | |
| TTCAATCAAATCTCAATCGT+TGG | + | chr7.4:34093397-34093416 | MS.gene95655:intron | 30.0% | |
| ! | AATCTAGTTTGTCATTGACT+CGG | + | chr7.4:34095096-34095115 | MS.gene95655:intron | 30.0% |
| ! | ATTACTATGATTTTGTTGGC+TGG | + | chr7.4:34092348-34092367 | MS.gene95655:CDS | 30.0% |
| ! | ATTGATACTTTTGTTGAGAG+CGG | + | chr7.4:34094137-34094156 | MS.gene95655:intron | 30.0% |
| ! | CTTTTTATGCAAGATCATCA+TGG | - | chr7.4:34094879-34094898 | None:intergenic | 30.0% |
| ! | TCCATTGTGTCTAATCATTT+TGG | + | chr7.4:34096346-34096365 | MS.gene95655:intron | 30.0% |
| ! | TGATCAACTTTTACCTTTCT+GGG | + | chr7.4:34092164-34092183 | MS.gene95655:CDS | 30.0% |
| !! | AGTTGCTTATAGGTTGATTA+AGG | + | chr7.4:34094172-34094191 | MS.gene95655:intron | 30.0% |
| !! | TGGACTTTTCTGTTTGAAAT+AGG | + | chr7.4:34095751-34095770 | MS.gene95655:intron | 30.0% |
| !! | TGGTGGATTTCTTTATCATT+GGG | + | chr7.4:34092467-34092486 | MS.gene95655:CDS | 30.0% |
| !! | TTTTCTAAAGAGTCTCAGAA+GGG | + | chr7.4:34092911-34092930 | MS.gene95655:intron | 30.0% |
| !! | TTTTTCTAAAGAGTCTCAGA+AGG | + | chr7.4:34092910-34092929 | MS.gene95655:intron | 30.0% |
| !!! | CTCTTGATGTTGTTTTCTTT+GGG | + | chr7.4:34093780-34093799 | MS.gene95655:CDS | 30.0% |
| !!! | TCTCTTGATGTTGTTTTCTT+TGG | + | chr7.4:34093779-34093798 | MS.gene95655:CDS | 30.0% |
| !!! | TGCTGAATGAACTAGTTTTT+TGG | + | chr7.4:34094081-34094100 | MS.gene95655:intron | 30.0% |
| AAAAGGGAGATGCAATGTTA+TGG | + | chr7.4:34094240-34094259 | MS.gene95655:intron | 35.0% | |
| AAAGTCAAGTCTTCTGCAAA+AGG | + | chr7.4:34094895-34094914 | MS.gene95655:CDS | 35.0% | |
| AAATATGATCCAACTAGGCA+TGG | + | chr7.4:34096942-34096961 | MS.gene95655:CDS | 35.0% | |
| AATAGTAATCTACAAAGGGC+TGG | - | chr7.4:34096693-34096712 | None:intergenic | 35.0% | |
| ACCAAGGATAAAGAGTGATA+GGG | + | chr7.4:34093589-34093608 | MS.gene95655:CDS | 35.0% | |
| ACCTAGAAAATATACGGAGT+TGG | - | chr7.4:34093499-34093518 | None:intergenic | 35.0% | |
| AGTGAAGCCATAGGAAAAAA+AGG | - | chr7.4:34092300-34092319 | None:intergenic | 35.0% | |
| CATTGGAATGTTACTACCTT+AGG | - | chr7.4:34095388-34095407 | None:intergenic | 35.0% | |
| CCAAACTTCATCCTTAACAT+TGG | - | chr7.4:34095405-34095424 | None:intergenic | 35.0% | |
| CCAATGTTAAGGATGAAGTT+TGG | + | chr7.4:34095402-34095421 | MS.gene95655:intron | 35.0% | |
| CGGTGAGTTTGACAAAATTA+CGG | - | chr7.4:34094374-34094393 | None:intergenic | 35.0% | |
| GAAGGATGAATATTAAGGCT+TGG | + | chr7.4:34092382-34092401 | MS.gene95655:CDS | 35.0% | |
| GAATCAATATTGGAAACCTG+GGG | - | chr7.4:34095496-34095515 | None:intergenic | 35.0% | |
| GATGAATATTAAGGCTTGGA+TGG | + | chr7.4:34092386-34092405 | MS.gene95655:CDS | 35.0% | |
| GGAAAAAAAGGTTCTTCCAT+TGG | - | chr7.4:34092288-34092307 | None:intergenic | 35.0% | |
| GGAATCAATATTGGAAACCT+GGG | - | chr7.4:34095497-34095516 | None:intergenic | 35.0% | |
| GTCAACAAAAACTGCTACTA+TGG | - | chr7.4:34094760-34094779 | None:intergenic | 35.0% | |
| GTTGTACTTGTGATTGCAAT+TGG | + | chr7.4:34093294-34093313 | MS.gene95655:intron | 35.0% | |
| TACAACTATTCATACCCTTG+AGG | + | chr7.4:34096841-34096860 | MS.gene95655:CDS | 35.0% | |
| TGAGATTTGATTGAAAGAGC+TGG | - | chr7.4:34093392-34093411 | None:intergenic | 35.0% | |
| TGATGTTGTTGAAACACCAA+TGG | + | chr7.4:34092269-34092288 | MS.gene95655:CDS | 35.0% | |
| TGGAATCAATATTGGAAACC+TGG | - | chr7.4:34095498-34095517 | None:intergenic | 35.0% | |
| TTACCAGTGACAAATTCAAG+GGG | + | chr7.4:34096711-34096730 | MS.gene95655:CDS | 35.0% | |
| TTGTAATAGTGAGTACTTGC+AGG | - | chr7.4:34092243-34092262 | None:intergenic | 35.0% | |
| TTTCACAAGCTCTTCAAGAT+AGG | - | chr7.4:34092864-34092883 | None:intergenic | 35.0% | |
| TTTGACAAAATTACGGTGAG+CGG | - | chr7.4:34094367-34094386 | None:intergenic | 35.0% | |
| ! | AATTAATTGCCATTGGTGGT+TGG | + | chr7.4:34093158-34093177 | MS.gene95655:intron | 35.0% |
| ! | AGAAATTTTTGCCCTAAAGC+TGG | - | chr7.4:34092201-34092220 | None:intergenic | 35.0% |
| ! | ATTGTGATGGGAATTCTATC+TGG | + | chr7.4:34094836-34094855 | MS.gene95655:CDS | 35.0% |
| ! | GATCAACTTTTACCTTTCTG+GGG | + | chr7.4:34092165-34092184 | MS.gene95655:CDS | 35.0% |
| ! | GGTGATATTTGAGACTCATT+AGG | - | chr7.4:34096271-34096290 | None:intergenic | 35.0% |
| ! | GGTGGATTTCTTTATCATTG+GGG | + | chr7.4:34092468-34092487 | MS.gene95655:CDS | 35.0% |
| ! | GGTTCTTGTTGCTTATAGAA+TGG | + | chr7.4:34092134-34092153 | MS.gene95655:CDS | 35.0% |
| ! | GTGATCAACTTTTACCTTTC+TGG | + | chr7.4:34092163-34092182 | MS.gene95655:CDS | 35.0% |
| ! | GTGTAGCTTTTGCAAAATCA+TGG | + | chr7.4:34094341-34094360 | MS.gene95655:intron | 35.0% |
| ! | GTTGCTTATAGAATGGCTTT+TGG | + | chr7.4:34092141-34092160 | MS.gene95655:CDS | 35.0% |
| ! | TCCAACTCCGTATATTTTCT+AGG | + | chr7.4:34093495-34093514 | MS.gene95655:intron | 35.0% |
| ! | TCTAACGATTGAGATTTTGC+TGG | + | chr7.4:34093466-34093485 | MS.gene95655:intron | 35.0% |
| ! | TTCGATCGACTCATCTATAT+AGG | + | chr7.4:34096476-34096495 | MS.gene95655:intron | 35.0% |
| ! | TTGATACTTTTGTTGAGAGC+GGG | + | chr7.4:34094138-34094157 | MS.gene95655:intron | 35.0% |
| ! | TTGCTGCCACTAATTGTTTT+AGG | - | chr7.4:34096770-34096789 | None:intergenic | 35.0% |
| ! | TTGTGATGGGAATTCTATCT+GGG | + | chr7.4:34094837-34094856 | MS.gene95655:CDS | 35.0% |
| !! | CAGCAATGTTTGTTATTGGA+TGG | + | chr7.4:34096784-34096803 | MS.gene95655:CDS | 35.0% |
| !! | GTGGTGGATTTCTTTATCAT+TGG | + | chr7.4:34092466-34092485 | MS.gene95655:CDS | 35.0% |
| !! | TACACTCTACTTTTCTTGCT+TGG | + | chr7.4:34095731-34095750 | MS.gene95655:intron | 35.0% |
| !! | TGCAGCAGTTTTAATCTGTT+GGG | + | chr7.4:34092113-34092132 | MS.gene95655:CDS | 35.0% |
| !! | TGTTGGTGCTTTTAGTCTTT+GGG | + | chr7.4:34092443-34092462 | MS.gene95655:CDS | 35.0% |
| !! | TTAAAGGTTGATGACACTCT+TGG | + | chr7.4:34096603-34096622 | MS.gene95655:intron | 35.0% |
| !! | TTGCAGCAGTTTTAATCTGT+TGG | + | chr7.4:34092112-34092131 | MS.gene95655:CDS | 35.0% |
| !!! | GGAAGAACCTTTTTTTCCTA+TGG | + | chr7.4:34092290-34092309 | MS.gene95655:CDS | 35.0% |
| AAACATGTGACCTAGCAAAG+AGG | - | chr7.4:34095437-34095456 | None:intergenic | 40.0% | |
| AACAAGGAGAATGATTGTGG+TGG | - | chr7.4:34096820-34096839 | None:intergenic | 40.0% | |
| AACTCACGTTAAGTGCATGT+TGG | + | chr7.4:34094263-34094282 | MS.gene95655:intron | 40.0% | |
| AAGATCATCATGGAGAACCA+AGG | - | chr7.4:34094869-34094888 | None:intergenic | 40.0% | |
| AGCATCAGCAACACATTGTT+TGG | - | chr7.4:34093626-34093645 | None:intergenic | 40.0% | |
| AGTATTTCACACACATGCTG+TGG | + | chr7.4:34096626-34096645 | MS.gene95655:CDS | 40.0% | |
| ATCAGCAACACATTGTTTGG+TGG | - | chr7.4:34093623-34093642 | None:intergenic | 40.0% | |
| ATGCATATATTACCTGCTCC+TGG | - | chr7.4:34093863-34093882 | None:intergenic | 40.0% | |
| ATGCTAAAACCAACCACCAA+TGG | - | chr7.4:34093170-34093189 | None:intergenic | 40.0% | |
| CCTCTTGCACCATTAACATA+AGG | - | chr7.4:34096999-34097018 | None:intergenic | 40.0% | |
| CCTTATGTTAATGGTGCAAG+AGG | + | chr7.4:34096996-34097015 | MS.gene95655:CDS | 40.0% | |
| GACCAAGGATAAAGAGTGAT+AGG | + | chr7.4:34093588-34093607 | MS.gene95655:CDS | 40.0% | |
| GCATAGAGAATTACTAGTCC+TGG | - | chr7.4:34092036-34092055 | None:intergenic | 40.0% | |
| GGATAAAGAGTGATAGGGAA+AGG | + | chr7.4:34093594-34093613 | MS.gene95655:CDS | 40.0% | |
| GGTGTGATTGATTATTCTGG+TGG | + | chr7.4:34092489-34092508 | MS.gene95655:CDS | 40.0% | |
| GTGATGTTGGAAGATGTGTT+TGG | - | chr7.4:34091942-34091961 | None:intergenic | 40.0% | |
| TAAACAAAGGAGACAACGCA+TGG | + | chr7.4:34091971-34091990 | MS.gene95655:CDS | 40.0% | |
| TAAGGATGAAGTTTGGGTGA+AGG | + | chr7.4:34095409-34095428 | MS.gene95655:intron | 40.0% | |
| TCCCTATCACTCTTTATCCT+TGG | - | chr7.4:34093593-34093612 | None:intergenic | 40.0% | |
| TCGTTGAATACTGGTAACAC+TGG | + | chr7.4:34096966-34096985 | MS.gene95655:CDS | 40.0% | |
| TGACTGCACACCTTAATGAA+TGG | - | chr7.4:34096400-34096419 | None:intergenic | 40.0% | |
| TGATTGAAAGAGCTGGAGTT+TGG | - | chr7.4:34093385-34093404 | None:intergenic | 40.0% | |
| TGCATATATTACCTGCTCCT+GGG | - | chr7.4:34093862-34093881 | None:intergenic | 40.0% | |
| TGGGGTGTGATTGATTATTC+TGG | + | chr7.4:34092486-34092505 | MS.gene95655:CDS | 40.0% | |
| ! | AATTCAAGGGGTGCATTCTA+TGG | + | chr7.4:34096723-34096742 | MS.gene95655:CDS | 40.0% |
| ! | CATGGACCAATTTCTTTTGC+TGG | - | chr7.4:34095939-34095958 | None:intergenic | 40.0% |
| ! | GAAACTTTTGTGCTCCATGA+AGG | - | chr7.4:34093010-34093029 | None:intergenic | 40.0% |
| ! | GATGCAACATTTGCTGCATA+TGG | - | chr7.4:34093701-34093720 | None:intergenic | 40.0% |
| ! | GGAGTGTCACCTTATGTTAA+TGG | + | chr7.4:34096987-34097006 | MS.gene95655:CDS | 40.0% |
| ! | TCAGTGTGATACTTGAGTTG+TGG | + | chr7.4:34094422-34094441 | MS.gene95655:intron | 40.0% |
| ! | TGGTTTCACTGCTGCTTATT+GGG | + | chr7.4:34092542-34092561 | MS.gene95655:CDS | 40.0% |
| ! | TTTTGTGCTCCATGAAGGAA+GGG | - | chr7.4:34093005-34093024 | None:intergenic | 40.0% |
| !! | CATCTTTCTTCTGGAATTGC+TGG | + | chr7.4:34092522-34092541 | MS.gene95655:CDS | 40.0% |
| !! | CTGTTGGTGCTTTTAGTCTT+TGG | + | chr7.4:34092442-34092461 | MS.gene95655:CDS | 40.0% |
| !! | GGTACTTTCCCTTTTTCATG+TGG | + | chr7.4:34093075-34093094 | MS.gene95655:intron | 40.0% |
| !! | GTGGCAGCAATGTTTGTTAT+TGG | + | chr7.4:34096780-34096799 | MS.gene95655:CDS | 40.0% |
| !! | GTTGGTGCTTTTAGTCTTTG+GGG | + | chr7.4:34092444-34092463 | MS.gene95655:CDS | 40.0% |
| !!! | CTTTTACCTTTCTGGGGTAA+AGG | + | chr7.4:34092171-34092190 | MS.gene95655:CDS | 40.0% |
| AGGCATGGTTCGTTGAATAC+TGG | + | chr7.4:34096957-34096976 | MS.gene95655:CDS | 45.0% | |
| ATCTTCCAACATCACCAGCA+TGG | + | chr7.4:34091947-34091966 | MS.gene95655:CDS | 45.0% | |
| ATGACAGCAGCAACACTAGT+TGG | + | chr7.4:34091997-34092016 | MS.gene95655:CDS | 45.0% | |
| ATGGTGTGTCTGCATCATGT+AGG | + | chr7.4:34094791-34094810 | MS.gene95655:intron | 45.0% | |
| CCATCATGCCACTATCACAA+TGG | - | chr7.4:34096218-34096237 | None:intergenic | 45.0% | |
| CGAGGAAGCTTATGCTCTTT+GGG | + | chr7.4:34096908-34096927 | MS.gene95655:CDS | 45.0% | |
| CTGGATTGTTATGGATGGGT+TGG | + | chr7.4:34093654-34093673 | MS.gene95655:CDS | 45.0% | |
| GAAAAATTGACGAATGCCCC+AGG | + | chr7.4:34095477-34095496 | MS.gene95655:intron | 45.0% | |
| GAGGAAGCTTATGCTCTTTG+GGG | + | chr7.4:34096909-34096928 | MS.gene95655:CDS | 45.0% | |
| GCATATATTACCTGCTCCTG+GGG | - | chr7.4:34093861-34093880 | None:intergenic | 45.0% | |
| GGAAGATGTGTTTGGTATGC+TGG | - | chr7.4:34091934-34091953 | None:intergenic | 45.0% | |
| GGCAGTGAATTCAGCTTTCA+TGG | + | chr7.4:34092077-34092096 | MS.gene95655:CDS | 45.0% | |
| TCACCAGCATGGCTAAACAA+AGG | + | chr7.4:34091958-34091977 | MS.gene95655:CDS | 45.0% | |
| TCTGTGATTGGAGCTGTTCA+GGG | + | chr7.4:34093809-34093828 | MS.gene95655:CDS | 45.0% | |
| TGAACAGCTCCAATCACAGA+AGG | - | chr7.4:34093809-34093828 | None:intergenic | 45.0% | |
| TGGTGTGTCTGCATCATGTA+GGG | + | chr7.4:34094792-34094811 | MS.gene95655:intron | 45.0% | |
| TTCAACGAACCATGCCTAGT+TGG | - | chr7.4:34096954-34096973 | None:intergenic | 45.0% | |
| TTCTGTGATTGGAGCTGTTC+AGG | + | chr7.4:34093808-34093827 | MS.gene95655:CDS | 45.0% | |
| TTTGGGAAGCCTTCTGTGAT+TGG | + | chr7.4:34093797-34093816 | MS.gene95655:CDS | 45.0% | |
| ! | AATGTGTTGCTGATGCTTGC+AGG | + | chr7.4:34093629-34093648 | MS.gene95655:CDS | 45.0% |
| ! | CGATTGAGATTTTGCTGGAG+AGG | + | chr7.4:34093471-34093490 | MS.gene95655:intron | 45.0% |
| ! | CTGGTTTCACTGCTGCTTAT+TGG | + | chr7.4:34092541-34092560 | MS.gene95655:CDS | 45.0% |
| ! | CTTTTGTGCTCCATGAAGGA+AGG | - | chr7.4:34093006-34093025 | None:intergenic | 45.0% |
| ! | GGATGGCTTTTGTTCCTCTT+TGG | + | chr7.4:34092403-34092422 | MS.gene95655:CDS | 45.0% |
| ! | GGTGCTGGATTGTTATGGAT+GGG | + | chr7.4:34093650-34093669 | MS.gene95655:CDS | 45.0% |
| ! | GTAAAGGTGCACCAGCTTTA+GGG | + | chr7.4:34092187-34092206 | MS.gene95655:CDS | 45.0% |
| ! | TATATGTGCAGGTTGGACCA+AGG | + | chr7.4:34093573-34093592 | MS.gene95655:intron | 45.0% |
| ! | TCTCCTTTGTTTAGCCATGC+TGG | - | chr7.4:34091964-34091983 | None:intergenic | 45.0% |
| ! | TTTAGCCATGCTGGTGATGT+TGG | - | chr7.4:34091955-34091974 | None:intergenic | 45.0% |
| !! | AGGTGCTGGATTGTTATGGA+TGG | + | chr7.4:34093649-34093668 | MS.gene95655:CDS | 45.0% |
| !! | CAGCAACTAGTCTTCTTGTG+TGG | + | chr7.4:34093753-34093772 | MS.gene95655:CDS | 45.0% |
| !! | CCATTGTGATAGTGGCATGA+TGG | + | chr7.4:34096215-34096234 | MS.gene95655:intron | 45.0% |
| !! | TGTTATGGATGGGTTGGTCA+GGG | + | chr7.4:34093660-34093679 | MS.gene95655:CDS | 45.0% |
| !! | TTCTATCTGGGAGCATTCCT+TGG | + | chr7.4:34094849-34094868 | MS.gene95655:CDS | 45.0% |
| !! | TTGCAGGTGCTGGATTGTTA+TGG | + | chr7.4:34093645-34093664 | MS.gene95655:CDS | 45.0% |
| !! | TTGTTATGGATGGGTTGGTC+AGG | + | chr7.4:34093659-34093678 | MS.gene95655:CDS | 45.0% |
| !! | TTGTTGGCTGGTTCTGTTCT+TGG | + | chr7.4:34092360-34092379 | MS.gene95655:CDS | 45.0% |
| !! | ATATTATATTAATTATAAGA+AGG | - | chr7.4:34095618-34095637 | None:intergenic | 5.0% |
| ATGTAGGGCTTGTGCAATCG+TGG | + | chr7.4:34094807-34094826 | MS.gene95655:intron | 50.0% | |
| CTATTGGGTGGCCTACTAAC+AGG | + | chr7.4:34096654-34096673 | MS.gene95655:CDS | 50.0% | |
| CTGCAAGGAGTCCTGTTAGT+AGG | - | chr7.4:34096668-34096687 | None:intergenic | 50.0% | |
| CTGTTAGTAGGCCACCCAAT+AGG | - | chr7.4:34096656-34096675 | None:intergenic | 50.0% | |
| GCACCCCTTGAATTTGTCAC+TGG | - | chr7.4:34096717-34096736 | None:intergenic | 50.0% | |
| GCGAGGAAGCTTATGCTCTT+TGG | + | chr7.4:34096907-34096926 | MS.gene95655:CDS | 50.0% | |
| GCTGTTCAGGGTATGATGAC+TGG | + | chr7.4:34093821-34093840 | MS.gene95655:CDS | 50.0% | |
| GGACTTGTATGTATCACCCC+AGG | + | chr7.4:34093842-34093861 | MS.gene95655:CDS | 50.0% | |
| GGTGAAGGTTCCTCTTTGCT+AGG | + | chr7.4:34095424-34095443 | MS.gene95655:intron | 50.0% | |
| GTCTAGTGTGTTCCTCCTCA+AGG | + | chr7.4:34094550-34094569 | MS.gene95655:intron | 50.0% | |
| TGTAGGGCTTGTGCAATCGT+GGG | + | chr7.4:34094808-34094827 | MS.gene95655:intron | 50.0% | |
| TTTCACACACATGCTGTGGC+TGG | + | chr7.4:34096630-34096649 | MS.gene95655:CDS | 50.0% | |
| ! | GCATTCTATGGTGGAAGTGG+TGG | + | chr7.4:34096735-34096754 | MS.gene95655:CDS | 50.0% |
| ! | GCTCGAAATCGGTGATGATG+CGG | + | chr7.4:34096878-34096897 | MS.gene95655:CDS | 50.0% |
| ! | GGTAAAGGTGCACCAGCTTT+AGG | + | chr7.4:34092186-34092205 | MS.gene95655:CDS | 50.0% |
| ! | GGTGCATTCTATGGTGGAAG+TGG | + | chr7.4:34096732-34096751 | MS.gene95655:CDS | 50.0% |
| ! | GTTGGTCTACAAAGCATGCC+AGG | + | chr7.4:34092015-34092034 | MS.gene95655:CDS | 50.0% |
| ! | TCAAGGGGTGCATTCTATGG+TGG | + | chr7.4:34096726-34096745 | MS.gene95655:CDS | 50.0% |
| !! | ATGGGTTGGTCAGGGTTCAA+TGG | + | chr7.4:34093668-34093687 | MS.gene95655:CDS | 50.0% |
| !! | GCTTATGCTCTTTGGGGTGA+TGG | + | chr7.4:34096915-34096934 | MS.gene95655:CDS | 50.0% |
| !! | GGTGCTTTTAGTCTTTGGGG+TGG | + | chr7.4:34092447-34092466 | MS.gene95655:CDS | 50.0% |
| !! | TGGCTGGTTCTGTTCTTGGA+AGG | + | chr7.4:34092364-34092383 | MS.gene95655:CDS | 50.0% |
| !!! | GCTTTTAGTCTTTGGGGTGG+TGG | + | chr7.4:34092450-34092469 | MS.gene95655:CDS | 50.0% |
| ATCGTGGGCGGCTATTGTGA+TGG | + | chr7.4:34094823-34094842 | MS.gene95655:CDS | 55.0% | |
| ATGCACCCTCCCTTCCTTCA+TGG | + | chr7.4:34092993-34093012 | MS.gene95655:intron | 55.0% | |
| GGTGCACCTTTACCCCAGAA+AGG | - | chr7.4:34092180-34092199 | None:intergenic | 55.0% | |
| GTATGTATCACCCCAGGAGC+AGG | + | chr7.4:34093848-34093867 | MS.gene95655:CDS | 55.0% | |
| GTGCTCCATGAAGGAAGGGA+GGG | - | chr7.4:34093001-34093020 | None:intergenic | 55.0% | |
| TCGTGGGCGGCTATTGTGAT+GGG | + | chr7.4:34094824-34094843 | MS.gene95655:CDS | 55.0% | |
| TGTGCTCCATGAAGGAAGGG+AGG | - | chr7.4:34093002-34093021 | None:intergenic | 55.0% | |
| TTGCTGATGCTTGCAGGTGC+TGG | + | chr7.4:34093635-34093654 | MS.gene95655:CDS | 55.0% | |
| ! | ACCGATTTCGAGCTGCTCGT+CGG | - | chr7.4:34096871-34096890 | None:intergenic | 55.0% |
| ! | AGGAAGGGAGGGTGCATCTA+AGG | - | chr7.4:34092990-34093009 | None:intergenic | 55.0% |
| ! | ATCGGTGATGATGCGGCTCA+CGG | + | chr7.4:34096885-34096904 | MS.gene95655:CDS | 55.0% |
| ! | GGAAGGGAGGGTGCATCTAA+GGG | - | chr7.4:34092989-34093008 | None:intergenic | 55.0% |
| ! | GGTTGGTCAGGGTTCAATGG+TGG | + | chr7.4:34093671-34093690 | MS.gene95655:CDS | 55.0% |
| !! | ACATGCTGTGGCTGGCCTAT+TGG | + | chr7.4:34096638-34096657 | MS.gene95655:CDS | 55.0% |
| !! | CATGCTGTGGCTGGCCTATT+GGG | + | chr7.4:34096639-34096658 | MS.gene95655:CDS | 55.0% |
| !! | TACAAAGGGCTGGCTCTGCA+AGG | - | chr7.4:34096683-34096702 | None:intergenic | 55.0% |
| AGGGCTTGTGCAATCGTGGG+CGG | + | chr7.4:34094811-34094830 | MS.gene95655:intron | 60.0% | |
| CCCGACGAGCAGCTCGAAAT+CGG | + | chr7.4:34096867-34096886 | MS.gene95655:CDS | 60.0% | |
| CCGATTTCGAGCTGCTCGTC+GGG | - | chr7.4:34096870-34096889 | None:intergenic | 60.0% | |
| TGCTCGTCGGGCATCCTCAA+GGG | - | chr7.4:34096858-34096877 | None:intergenic | 60.0% | |
| CTGCTCGTCGGGCATCCTCA+AGG | - | chr7.4:34096859-34096878 | None:intergenic | 65.0% | |
| ! | TGATGATGCGGCTCACGGCG+AGG | + | chr7.4:34096890-34096909 | MS.gene95655:CDS | 65.0% |
| !! | GCTGTGGCTGGCCTATTGGG+TGG | + | chr7.4:34096642-34096661 | MS.gene95655:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 34091913 | 34097037 | 34091913 | ID=MS.gene95655 |
| chr7.4 | mRNA | 34091913 | 34097037 | 34091913 | ID=MS.gene95655.t1;Parent=MS.gene95655 |
| chr7.4 | exon | 34091913 | 34092563 | 34091913 | ID=MS.gene95655.t1.exon1;Parent=MS.gene95655.t1 |
| chr7.4 | CDS | 34091913 | 34092563 | 34091913 | ID=cds.MS.gene95655.t1;Parent=MS.gene95655.t1 |
| chr7.4 | exon | 34093584 | 34093869 | 34093584 | ID=MS.gene95655.t1.exon2;Parent=MS.gene95655.t1 |
| chr7.4 | CDS | 34093584 | 34093869 | 34093584 | ID=cds.MS.gene95655.t1;Parent=MS.gene95655.t1 |
| chr7.4 | exon | 34094813 | 34094916 | 34094813 | ID=MS.gene95655.t1.exon3;Parent=MS.gene95655.t1 |
| chr7.4 | CDS | 34094813 | 34094916 | 34094813 | ID=cds.MS.gene95655.t1;Parent=MS.gene95655.t1 |
| chr7.4 | exon | 34096609 | 34097037 | 34096609 | ID=MS.gene95655.t1.exon4;Parent=MS.gene95655.t1 |
| chr7.4 | CDS | 34096609 | 34097037 | 34096609 | ID=cds.MS.gene95655.t1;Parent=MS.gene95655.t1 |
| Gene Sequence |
| Protein sequence |
