AlfalfaGEDB | MsG0380014031.01

M. sativa cultivar ZhongmuNo.1 / MsG0380014031.01

KEGG: -
GO: GO:0017004 GO:0020037
PFAM: PF01578

Nr:

Query id	Subject id	identity %	alignment length	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014031.01.T04	YP_009141663.1	100	129	1	129	195	323	8.83E-88	268
MsG0380014031.01.T02	YP_009141663.1	100	187	1	187	137	323	3.83E-132	383
MsG0380014031.01.T03	YP_009141663.1	100	181	1	181	143	323	4.37E-127	370
MsG0380014031.01.T01	YP_009141663.1	100	323	1	323	1	323	0	651

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014031.01.T01	Q9BBP4	88.854	323	36	1	323	1	323	0	582
MsG0380014031.01.T02	Q9BBP4	87.701	187	23	1	187	137	323	4.19E-117	338
MsG0380014031.01.T03	Q9BBP4	87.293	181	23	1	181	143	323	6.37E-112	324
MsG0380014031.01.T04	Q9BBP4	92.248	129	10	1	129	195	323	2.21E-83	249

Trembl:

Query id	Subject id	identity %	alignment length	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014031.01.T01	A0A1J0I0D3	100.000	323	1	323	1	323	0.0	651
MsG0380014031.01.T02	A0A0F6NLW8	100.000	187	1	187	137	323	1.83e-132	383
MsG0380014031.01.T03	A0A1J0I0D3	100.000	181	1	181	143	323	2.09e-127	370
MsG0380014031.01.T04	A0A0F6NLW8	100.000	129	1	129	195	323	4.22e-88	268

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048560.01	MsG0380014031.01	0.820449	6.819555e-53	5.397718e-50
MsG0080048690.01	MsG0380014031.01	0.826709	2.337663e-54	2.209276e-51
MsG0080048691.01	MsG0380014031.01	0.843441	1.398942e-58	2.189004e-55
MsG0080048692.01	MsG0380014031.01	0.819111	1.378382e-52	1.051147e-49
MsG0080048694.01	MsG0380014031.01	0.825844	3.756308e-54	3.463912e-51
MsG0080048695.01	MsG0380014031.01	0.826371	2.814344e-54	2.634453e-51
MsG0080048697.01	MsG0380014031.01	0.809607	1.740577e-50	1.026620e-47
MsG0080048698.01	MsG0380014031.01	0.808705	2.715602e-50	1.563528e-47
MsG0080049076.01	MsG0380014031.01	0.805250	1.461498e-49	7.694551e-47
MsG0180002439.01	MsG0380014031.01	0.803883	2.817653e-49	1.432292e-46
MsG0380013448.01	MsG0380014031.01	0.824499	7.809711e-54	6.929543e-51
MsG0380013890.01	MsG0380014031.01	0.804234	2.381784e-49	1.221583e-46
MsG0380013892.01	MsG0380014031.01	0.802791	4.744024e-49	2.344954e-46
MsG0380013921.01	MsG0380014031.01	0.809281	2.045137e-50	1.195759e-47
MsG0380013926.01	MsG0380014031.01	0.812153	4.892512e-51	3.087006e-48
MsG0380013928.01	MsG0380014031.01	0.825149	5.487009e-54	4.960748e-51
MsG0380013934.01	MsG0380014031.01	0.985758	1.427750e-164	6.066398e-158
MsG0380013935.01	MsG0380014031.01	0.801254	9.820870e-49	4.668357e-46
MsG0380013940.01	MsG0380014031.01	0.840794	7.015412e-58	1.010426e-54
MsG0380013942.01	MsG0380014031.01	0.802964	4.368764e-49	2.168891e-46
MsG0380013943.01	MsG0380014031.01	0.842720	2.176539e-58	3.328911e-55
MsG0380013945.01	MsG0380014031.01	0.814203	1.736531e-51	1.157750e-48
MsG0380013953.01	MsG0380014031.01	0.809442	1.888530e-50	1.108928e-47
MsG0380013956.01	MsG0380014031.01	0.816108	6.554709e-52	4.602866e-49
MsG0380013957.01	MsG0380014031.01	0.810399	1.175443e-50	7.077697e-48
MsG0380013966.01	MsG0380014031.01	0.831860	1.313600e-55	1.443647e-52
MsG0380013967.01	MsG0380014031.01	0.812557	3.993919e-51	2.547387e-48
MsG0380013971.01	MsG0380014031.01	0.823973	1.037828e-53	9.072399e-51
MsG0380013975.01	MsG0380014031.01	0.813961	1.963652e-51	1.300633e-48
MsG0380013977.01	MsG0380014031.01	0.817452	3.273316e-52	2.384853e-49
MsG0380013986.01	MsG0380014031.01	0.804374	2.227283e-49	1.146526e-46
MsG0380013997.01	MsG0380014031.01	0.816921	4.310761e-52	3.095162e-49
MsG0380013999.01	MsG0380014031.01	0.807148	5.824420e-50	3.219630e-47
MsG0380014005.01	MsG0380014031.01	0.821368	4.190091e-53	3.402219e-50
MsG0380014016.01	MsG0380014031.01	0.812511	4.086163e-51	2.603142e-48
MsG0380014017.01	MsG0380014031.01	0.816883	4.394161e-52	3.151825e-49
MsG0380014018.01	MsG0380014031.01	0.802489	5.476967e-49	2.686277e-46
MsG0380014020.01	MsG0380014031.01	0.820322	7.293244e-53	5.751992e-50
MsG0380014023.01	MsG0380014031.01	0.825462	4.626228e-54	4.219369e-51
MsG0380014026.01	MsG0380014031.01	0.818314	2.090739e-52	1.559652e-49
MsG0380014029.01	MsG0380014031.01	0.831381	1.724300e-55	1.868046e-52
MsG0380014031.01	MsG0380014032.01	0.812675	3.762650e-51	2.407349e-48
MsG0380014031.01	MsG0380014033.01	0.825269	5.140865e-54	4.663394e-51
MsG0380014031.01	MsG0380014054.01	0.807587	4.699815e-50	2.627710e-47
MsG0380014031.01	MsG0480018296.01	0.825603	4.282906e-54	3.922326e-51
MsG0380014031.01	MsG0480019028.01	0.806563	7.741896e-50	4.215534e-47
MsG0380014031.01	MsG0580027677.01	0.834012	3.833820e-56	4.491778e-53
MsG0380014031.01	MsG0780038197.01	0.814360	1.602873e-51	1.073221e-48
MsG0280010137.01	MsG0380014031.01	0.817314	3.516586e-52	2.552206e-49
MsG0280010142.01	MsG0380014031.01	0.828876	7.047003e-55	7.093367e-52
MsG0280010144.01	MsG0380014031.01	0.805180	1.511986e-49	7.946324e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014031.01.T04	MTR_4g006130	99.225	129	1	0	1	129	195	323	4.14e-91	266
MsG0380014031.01.T04	MTR_0002s0180	82.353	102	18	0	26	127	243	344	2.79e-55	176
MsG0380014031.01.T04	MTR_0002s0180	57.143	70	30	0	3	72	25	94	1.49e-21	88.2
MsG0380014031.01.T04	MTR_0002s0180	72.340	47	13	0	26	72	87	133	9.45e-17	75.1
MsG0380014031.01.T04	MTR_0002s0180	72.340	47	13	0	26	72	126	172	9.45e-17	75.1
MsG0380014031.01.T04	MTR_0002s0180	72.340	47	13	0	26	72	165	211	9.45e-17	75.1
MsG0380014031.01.T04	MTR_4g006180	95.000	80	4	0	39	118	105	184	2.20e-49	156
MsG0380014031.01.T04	MTR_4g086560	71.429	35	10	0	60	94	2	36	4.45e-11	54.7
MsG0380014031.01.T02	MTR_4g006130	98.930	187	2	0	1	187	137	323	1.49e-134	379
MsG0380014031.01.T02	MTR_4g006180	77.019	161	5	1	16	176	56	184	3.99e-79	234
MsG0380014031.01.T02	MTR_0002s0180	82.353	102	18	0	84	185	243	344	8.71e-56	180
MsG0380014031.01.T02	MTR_0002s0180	57.971	69	29	0	62	130	26	94	3.62e-21	89.4
MsG0380014031.01.T02	MTR_0002s0180	72.340	47	13	0	84	130	87	133	1.95e-16	76.3
MsG0380014031.01.T02	MTR_0002s0180	72.340	47	13	0	84	130	126	172	1.95e-16	76.3
MsG0380014031.01.T02	MTR_0002s0180	72.340	47	13	0	84	130	165	211	1.95e-16	76.3
MsG0380014031.01.T03	MTR_4g006130	98.895	181	2	0	1	181	143	323	1.48e-129	366
MsG0380014031.01.T03	MTR_4g006180	77.019	161	5	1	10	170	56	184	5.90e-79	233
MsG0380014031.01.T03	MTR_0002s0180	82.353	102	18	0	78	179	243	344	1.44e-55	179
MsG0380014031.01.T03	MTR_0002s0180	57.971	69	29	0	56	124	26	94	3.93e-21	89.0
MsG0380014031.01.T03	MTR_0002s0180	72.340	47	13	0	78	124	87	133	2.14e-16	75.9
MsG0380014031.01.T03	MTR_0002s0180	72.340	47	13	0	78	124	126	172	2.14e-16	75.9
MsG0380014031.01.T03	MTR_0002s0180	72.340	47	13	0	78	124	165	211	2.14e-16	75.9
MsG0380014031.01.T01	MTR_4g006130	99.381	323	2	0	1	323	1	323	0.0	647
MsG0380014031.01.T01	MTR_4g006180	77.019	161	5	1	152	312	56	184	1.54e-77	235
MsG0380014031.01.T01	MTR_0002s0180	82.353	102	18	0	220	321	243	344	2.66e-54	181
MsG0380014031.01.T01	MTR_0002s0180	57.971	69	29	0	198	266	26	94	6.34e-20	89.4
MsG0380014031.01.T01	MTR_0002s0180	72.340	47	13	0	220	266	87	133	1.09e-15	77.0
MsG0380014031.01.T01	MTR_0002s0180	72.340	47	13	0	220	266	126	172	1.09e-15	77.0
MsG0380014031.01.T01	MTR_0002s0180	72.340	47	13	0	220	266	165	211	1.09e-15	77.0
MsG0380014031.01.T01	MTR_4g050940	97.959	49	1	0	92	140	492	540	2.48e-23	100

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014031.01.T04	ATCG01040	74.809	131	31	1	1	129	198	328	4.59e-68	208
MsG0380014031.01.T02	ATCG01040	67.708	192	54	4	1	187	140	328	1.06e-85	256
MsG0380014031.01.T03	ATCG01040	66.667	186	54	4	1	181	146	328	1.66e-80	242
MsG0380014031.01.T01	ATCG01040	69.486	331	90	6	1	323	1	328	6.79e-158	444

Find 59 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATAATTTGGATATGTTATT+TGG	0.035368	3:+48693011	MsG0380014031.01.T01:CDS
CTATCGGATTTCTTATAATT+TGG	0.090975	3:+48692998	MsG0380014031.01.T01:CDS
TTAACGATAGGTATTCTTTC+AGG	0.167286	3:+48692826	MsG0380014031.01.T01:CDS
TATTACAGATTGATGCATTT+TGG	0.187687	3:-48692473	None:intergenic
TCTTGGTAAAAGCAAGAATT+TGG	0.187850	3:-48692624	None:intergenic
GTGCGATTATTGTACTTAAA+AGG	0.208149	3:-48692405	None:intergenic
ATTCTTCTCGAAATTATTAT+AGG	0.227957	3:+48692740	MsG0380014031.01.T01:CDS
TACGATTTCATTGACTAATA+AGG	0.242439	3:-48692200	None:intergenic
GGGTTATCGTATTATTAGTC+TGG	0.260155	3:+48692792	MsG0380014031.01.T01:CDS
ATAATTTGGATATGTTATTT+GGG	0.278059	3:+48693012	MsG0380014031.01.T01:CDS
AATCACTAATCTTTCTTTCA+TGG	0.299061	3:+48692335	MsG0380014031.01.T01:CDS
TATTTGGGGATCAATCTATT+AGG	0.301881	3:+48693027	MsG0380014031.01.T01:CDS
ATAAATCACTAAATGGTAAA+TGG	0.304107	3:-48692309	None:intergenic
ACCCAAGGCTTTGCGACTTC+GGG	0.307724	3:+48692442	MsG0380014031.01.T01:CDS
GATTCATATAAATCACTAAA+TGG	0.322875	3:-48692316	None:intergenic
GTCTCAATTTATTCAACAAT+TGG	0.332140	3:+48692762	MsG0380014031.01.T01:CDS
GTATTCTTTCAGGGGCAGTA+TGG	0.344438	3:+48692836	MsG0380014031.01.T01:CDS
GCACGTAAGTATGATGATAT+TGG	0.355525	3:+48692531	MsG0380014031.01.T01:CDS
ATGTAAATAAATCGCGAATA+TGG	0.365724	3:-48692926	None:intergenic
GGGATCAATCTATTAGGAAT+AGG	0.369297	3:+48693033	MsG0380014031.01.T01:CDS
TATTCAACAATTGGATCGTT+GGG	0.371301	3:+48692771	MsG0380014031.01.T01:CDS
CACGTAAGTATGATGATATT+GGG	0.380365	3:+48692532	MsG0380014031.01.T01:CDS
ATAAAGGCCCAAGTTTCCTT+TGG	0.387633	3:-48692895	None:intergenic
TACCCAAGGCTTTGCGACTT+CGG	0.388084	3:+48692441	MsG0380014031.01.T01:CDS
AAACTTGGGCCTTTATTACT+TGG	0.389612	3:+48692902	MsG0380014031.01.T01:CDS
CTTTGGATCCCAATTCCAAT+AGG	0.398232	3:-48692878	None:intergenic
ATCACTAATCTTTCTTTCAT+GGG	0.410243	3:+48692336	MsG0380014031.01.T01:CDS
GAATATGGTCCAAGTAATAA+AGG	0.424917	3:-48692911	None:intergenic
GGAATAGGACTACATAGTTA+TGG	0.437532	3:+48693048	MsG0380014031.01.T01:CDS
GACCCGAAGTCGCAAAGCCT+TGG	0.441648	3:-48692444	None:intergenic
TTATTCAACAATTGGATCGT+TGG	0.445183	3:+48692770	MsG0380014031.01.T01:CDS
AGGTGTAAATTCTTCAATAG+TGG	0.446752	3:+48692972	MsG0380014031.01.T01:CDS
CAGTATGGGCTAACGAGGCA+TGG	0.456884	3:+48692851	MsG0380014031.01.T01:CDS
TAACGATAGGTATTCTTTCA+GGG	0.458341	3:+48692827	MsG0380014031.01.T01:CDS
AGTATGGGCTAACGAGGCAT+GGG	0.460941	3:+48692852	MsG0380014031.01.T01:CDS
ATTGGGATCCAAAGGAAACT+TGG	0.468487	3:+48692887	MsG0380014031.01.T01:CDS
ACCCGAAGTCGCAAAGCCTT+GGG	0.479576	3:-48692443	None:intergenic
GGTTATCGTATTATTAGTCT+GGG	0.494225	3:+48692793	MsG0380014031.01.T01:CDS
AGCCAATGGGATTGTAGAGC+GGG	0.500187	3:-48692502	None:intergenic
GGTAAAAGCAAGAATTTGGA+TGG	0.503442	3:-48692620	None:intergenic
TGAAATAACAATTGATATGA+CGG	0.507150	3:-48692164	None:intergenic
AATTATAAGAAATCCGATAG+AGG	0.510146	3:-48692995	None:intergenic
TATTCTTTCAGGGGCAGTAT+GGG	0.510856	3:+48692837	MsG0380014031.01.T01:CDS
TACGTGCATCATTAGCCAAT+GGG	0.516863	3:-48692515	None:intergenic
TCTTCAATAGTGGCCTCTAT+CGG	0.533237	3:+48692982	MsG0380014031.01.T01:CDS
CGGGATTGTTAATTACTCGT+TGG	0.536402	3:+48692275	MsG0380014031.01.T01:CDS
TTGGGATCCAAAGGAAACTT+GGG	0.548159	3:+48692888	MsG0380014031.01.T01:CDS
TCACTAATCTTTCTTTCATG+GGG	0.566422	3:+48692337	MsG0380014031.01.T01:CDS
TAATTTGGATATGTTATTTG+GGG	0.573007	3:+48693013	MsG0380014031.01.T01:CDS
GTATGGGCTAACGAGGCATG+GGG	0.574025	3:+48692853	MsG0380014031.01.T01:CDS
TACCCGCTCTACAATCCCAT+TGG	0.579531	3:+48692500	MsG0380014031.01.T01:CDS
TTATTAGTCAATGAAATCGT+AGG	0.583517	3:+48692202	MsG0380014031.01.T01:CDS
AACGATAGGTATTCTTTCAG+GGG	0.592337	3:+48692828	MsG0380014031.01.T01:CDS
CTATTGGAATTGGGATCCAA+AGG	0.598303	3:+48692879	MsG0380014031.01.T01:CDS
TTACGTGCATCATTAGCCAA+TGG	0.601096	3:-48692516	None:intergenic
ATTCAACAATTGGATCGTTG+GGG	0.609925	3:+48692772	MsG0380014031.01.T01:CDS
AGGGGCAGTATGGGCTAACG+AGG	0.651343	3:+48692846	MsG0380014031.01.T01:CDS
TAGCCAATGGGATTGTAGAG+CGG	0.669534	3:-48692503	None:intergenic
TATGGGCTAACGAGGCATGG+GGG	0.692845	3:+48692854	MsG0380014031.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGAAAAAATAAAAAATTTGA+AGG	+	Chr3:48692952-48692971	MsG0380014031.01.T01:CDS	10.0%
!!	ATTTAAAAAATCCAAATTCT+TGG	-	Chr3:48692644-48692663	None:intergenic	15.0%
!!	TATAATTTGGATATGTTATT+TGG	+	Chr3:48693011-48693030	MsG0380014031.01.T01:CDS	15.0%
!!!	ATAATTTGGATATGTTATTT+GGG	+	Chr3:48693012-48693031	MsG0380014031.01.T01:CDS	15.0%
!!!	TTTTTTTCCTTTTTAAAACA+CGG	-	Chr3:48692385-48692404	None:intergenic	15.0%
!!	ACAGAAAAAAGTTATTATCA+TGG	-	Chr3:48692251-48692270	None:intergenic	20.0%
!!	ATAAATCACTAAATGGTAAA+TGG	-	Chr3:48692312-48692331	None:intergenic	20.0%
!!	ATTCTTCTCGAAATTATTAT+AGG	+	Chr3:48692740-48692759	MsG0380014031.01.T01:CDS	20.0%
!!	GATTCATATAAATCACTAAA+TGG	-	Chr3:48692319-48692338	None:intergenic	20.0%
!!	TGAAATAACAATTGATATGA+CGG	-	Chr3:48692167-48692186	None:intergenic	20.0%
!!!	AATAACTTTTTTCTGTGTAA+CGG	+	Chr3:48692255-48692274	MsG0380014031.01.T01:CDS	20.0%
!!!	TAATTTGGATATGTTATTTG+GGG	+	Chr3:48693013-48693032	MsG0380014031.01.T01:CDS	20.0%
!!!	TTTTATTTCGACAAAATCAA+CGG	-	Chr3:48692671-48692690	None:intergenic	20.0%
!	AATCACTAATCTTTCTTTCA+TGG	+	Chr3:48692335-48692354	MsG0380014031.01.T01:CDS	25.0%
!	AATTATAAGAAATCCGATAG+AGG	-	Chr3:48692998-48693017	None:intergenic	25.0%
!	ATCACTAATCTTTCTTTCAT+GGG	+	Chr3:48692336-48692355	MsG0380014031.01.T01:CDS	25.0%
!	ATGTAAATAAATCGCGAATA+TGG	-	Chr3:48692929-48692948	None:intergenic	25.0%
!	CTATCGGATTTCTTATAATT+TGG	+	Chr3:48692998-48693017	MsG0380014031.01.T01:CDS	25.0%
!	GTCTCAATTTATTCAACAAT+TGG	+	Chr3:48692762-48692781	MsG0380014031.01.T01:CDS	25.0%
!	TTATTAGTCAATGAAATCGT+AGG	+	Chr3:48692202-48692221	MsG0380014031.01.T01:CDS	25.0%
!!	TACGATTTCATTGACTAATA+AGG	-	Chr3:48692203-48692222	None:intergenic	25.0%
!!	TATTACAGATTGATGCATTT+TGG	-	Chr3:48692476-48692495	None:intergenic	25.0%
!!!	AATTACTCGTTGGTTTTTTT+CGG	+	Chr3:48692285-48692304	MsG0380014031.01.T01:CDS	25.0%
!!!	AGTTATTATCATGGCTTTTT+TGG	-	Chr3:48692242-48692261	None:intergenic	25.0%
!!!	ATAACTTTTTTCTGTGTAAC+GGG	+	Chr3:48692256-48692275	MsG0380014031.01.T01:CDS	25.0%
	AGGTGTAAATTCTTCAATAG+TGG	+	Chr3:48692972-48692991	MsG0380014031.01.T01:CDS	30.0%
	CACGTAAGTATGATGATATT+GGG	+	Chr3:48692532-48692551	MsG0380014031.01.T01:CDS	30.0%
	GAATATGGTCCAAGTAATAA+AGG	-	Chr3:48692914-48692933	None:intergenic	30.0%
	GTGCGATTATTGTACTTAAA+AGG	-	Chr3:48692408-48692427	None:intergenic	30.0%
	TAACGATAGGTATTCTTTCA+GGG	+	Chr3:48692827-48692846	MsG0380014031.01.T01:CDS	30.0%
	TATTCAACAATTGGATCGTT+GGG	+	Chr3:48692771-48692790	MsG0380014031.01.T01:CDS	30.0%
	TATTTGGGGATCAATCTATT+AGG	+	Chr3:48693027-48693046	MsG0380014031.01.T01:CDS	30.0%
	TCACTAATCTTTCTTTCATG+GGG	+	Chr3:48692337-48692356	MsG0380014031.01.T01:CDS	30.0%
	TCTTGGTAAAAGCAAGAATT+TGG	-	Chr3:48692627-48692646	None:intergenic	30.0%
	TTAACGATAGGTATTCTTTC+AGG	+	Chr3:48692826-48692845	MsG0380014031.01.T01:CDS	30.0%
	TTATTCAACAATTGGATCGT+TGG	+	Chr3:48692770-48692789	MsG0380014031.01.T01:CDS	30.0%
!	GGTTATCGTATTATTAGTCT+GGG	+	Chr3:48692793-48692812	MsG0380014031.01.T01:CDS	30.0%
!!	GGGTTTTTCCATTTTTCATA+TGG	+	Chr3:48692357-48692376	MsG0380014031.01.T01:CDS	30.0%
!!	TCTTGCTTTTACCAAGAATT+TGG	+	Chr3:48692630-48692649	MsG0380014031.01.T01:CDS	30.0%
!!!	ATTACTCGTTGGTTTTTTTC+GGG	+	Chr3:48692286-48692305	MsG0380014031.01.T01:CDS	30.0%
!!!	GGTTTTCTGTTTTTAACGAT+AGG	+	Chr3:48692814-48692833	MsG0380014031.01.T01:CDS	30.0%
!!!	TATGGTTCCGTGTTTTAAAA+AGG	+	Chr3:48692375-48692394	MsG0380014031.01.T01:CDS	30.0%
	AAACTTGGGCCTTTATTACT+TGG	+	Chr3:48692902-48692921	MsG0380014031.01.T01:CDS	35.0%
	AACGATAGGTATTCTTTCAG+GGG	+	Chr3:48692828-48692847	MsG0380014031.01.T01:CDS	35.0%
	ACACGGAACCATATGAAAAA+TGG	-	Chr3:48692368-48692387	None:intergenic	35.0%
	ATTCAACAATTGGATCGTTG+GGG	+	Chr3:48692772-48692791	MsG0380014031.01.T01:CDS	35.0%
	CCTTGGGTAAAAATAACACT+TGG	-	Chr3:48692430-48692449	None:intergenic	35.0%
	GCACGTAAGTATGATGATAT+TGG	+	Chr3:48692531-48692550	MsG0380014031.01.T01:CDS	35.0%
	GGAATAGGACTACATAGTTA+TGG	+	Chr3:48693048-48693067	MsG0380014031.01.T01:CDS	35.0%
	GGGATCAATCTATTAGGAAT+AGG	+	Chr3:48693033-48693052	MsG0380014031.01.T01:CDS	35.0%
	GGGTTATCGTATTATTAGTC+TGG	+	Chr3:48692792-48692811	MsG0380014031.01.T01:CDS	35.0%
	GGTAAAAGCAAGAATTTGGA+TGG	-	Chr3:48692623-48692642	None:intergenic	35.0%
!!!	CCAAGTGTTATTTTTACCCA+AGG	+	Chr3:48692427-48692446	MsG0380014031.01.T01:CDS	35.0%
	ATAAAGGCCCAAGTTTCCTT+TGG	-	Chr3:48692898-48692917	None:intergenic	40.0%
	ATTGGGATCCAAAGGAAACT+TGG	+	Chr3:48692887-48692906	MsG0380014031.01.T01:CDS	40.0%
	CGGGATTGTTAATTACTCGT+TGG	+	Chr3:48692275-48692294	MsG0380014031.01.T01:CDS	40.0%
	CTATTGGAATTGGGATCCAA+AGG	+	Chr3:48692879-48692898	MsG0380014031.01.T01:CDS	40.0%
	CTTTGGATCCCAATTCCAAT+AGG	-	Chr3:48692881-48692900	None:intergenic	40.0%
	TACGTGCATCATTAGCCAAT+GGG	-	Chr3:48692518-48692537	None:intergenic	40.0%
	TATTCTTTCAGGGGCAGTAT+GGG	+	Chr3:48692837-48692856	MsG0380014031.01.T01:CDS	40.0%
	TCTTCAATAGTGGCCTCTAT+CGG	+	Chr3:48692982-48693001	MsG0380014031.01.T01:CDS	40.0%
	TTACGTGCATCATTAGCCAA+TGG	-	Chr3:48692519-48692538	None:intergenic	40.0%
	TTGGGATCCAAAGGAAACTT+GGG	+	Chr3:48692888-48692907	MsG0380014031.01.T01:CDS	40.0%
	ATGGGGGTCCTATTGGAATT+GGG	+	Chr3:48692870-48692889	MsG0380014031.01.T01:CDS	45.0%
	GTATTCTTTCAGGGGCAGTA+TGG	+	Chr3:48692836-48692855	MsG0380014031.01.T01:CDS	45.0%
	TAGCCAATGGGATTGTAGAG+CGG	-	Chr3:48692506-48692525	None:intergenic	45.0%
!	GGCTATGCAGCTCTTTTATG+TGG	+	Chr3:48692553-48692572	MsG0380014031.01.T01:CDS	45.0%
	AGCCAATGGGATTGTAGAGC+GGG	-	Chr3:48692505-48692524	None:intergenic	50.0%
	CATGGGGGTCCTATTGGAAT+TGG	+	Chr3:48692869-48692888	MsG0380014031.01.T01:CDS	50.0%
	TACCCAAGGCTTTGCGACTT+CGG	+	Chr3:48692441-48692460	MsG0380014031.01.T01:CDS	50.0%
	TACCCGCTCTACAATCCCAT+TGG	+	Chr3:48692500-48692519	MsG0380014031.01.T01:CDS	50.0%
!	AGTATGGGCTAACGAGGCAT+GGG	+	Chr3:48692852-48692871	MsG0380014031.01.T01:CDS	50.0%
	ACCCAAGGCTTTGCGACTTC+GGG	+	Chr3:48692442-48692461	MsG0380014031.01.T01:CDS	55.0%
	ACCCGAAGTCGCAAAGCCTT+GGG	-	Chr3:48692446-48692465	None:intergenic	55.0%
!	CAGTATGGGCTAACGAGGCA+TGG	+	Chr3:48692851-48692870	MsG0380014031.01.T01:CDS	55.0%
!	GTATGGGCTAACGAGGCATG+GGG	+	Chr3:48692853-48692872	MsG0380014031.01.T01:CDS	55.0%
!	TATGGGCTAACGAGGCATGG+GGG	+	Chr3:48692854-48692873	MsG0380014031.01.T01:CDS	55.0%
	ACGAGGCATGGGGGTCCTAT+TGG	+	Chr3:48692863-48692882	MsG0380014031.01.T01:CDS	60.0%
	GACCCGAAGTCGCAAAGCCT+TGG	-	Chr3:48692447-48692466	None:intergenic	60.0%
!	AGGGGCAGTATGGGCTAACG+AGG	+	Chr3:48692846-48692865	MsG0380014031.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	48692118	48693089	48692118	ID=MsG0380014031.01;Name=MsG0380014031.01
Chr3	mRNA	48692118	48693089	48692118	ID=MsG0380014031.01.T01;Parent=MsG0380014031.01;Name=MsG0380014031.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|323
Chr3	exon	48692118	48693089	48692118	ID=MsG0380014031.01.T01:exon:14164;Parent=MsG0380014031.01.T01
Chr3	CDS	48692118	48693089	48692118	ID=MsG0380014031.01.T01:cds;Parent=MsG0380014031.01.T01
Chr3	mRNA	48692526	48693089	48692526	ID=MsG0380014031.01.T02;Parent=MsG0380014031.01;Name=MsG0380014031.01.T02;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|187
Chr3	exon	48692526	48693089	48692526	ID=MsG0380014031.01.T02:exon:14165;Parent=MsG0380014031.01.T02
Chr3	CDS	48692526	48693089	48692526	ID=MsG0380014031.01.T02:cds;Parent=MsG0380014031.01.T02
Chr3	mRNA	48692544	48693089	48692544	ID=MsG0380014031.01.T03;Parent=MsG0380014031.01;Name=MsG0380014031.01.T03;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|181
Chr3	exon	48692544	48693089	48692544	ID=MsG0380014031.01.T03:exon:14166;Parent=MsG0380014031.01.T03
Chr3	CDS	48692544	48693089	48692544	ID=MsG0380014031.01.T03:cds;Parent=MsG0380014031.01.T03
Chr3	mRNA	48692700	48693089	48692700	ID=MsG0380014031.01.T04;Parent=MsG0380014031.01;Name=MsG0380014031.01.T04;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|129
Chr3	exon	48692700	48693089	48692700	ID=MsG0380014031.01.T04:exon:14167;Parent=MsG0380014031.01.T04
Chr3	CDS	48692700	48693089	48692700	ID=MsG0380014031.01.T04:cds;Parent=MsG0380014031.01.T04
Chr3	mRNA	48692704	48692829	48692704	ID=MsG0380014031.01.T05;Parent=MsG0380014031.01;Name=MsG0380014031.01.T05;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|41
Chr3	exon	48692704	48692829	48692704	ID=MsG0380014031.01.T05:exon:14168;Parent=MsG0380014031.01.T05
Chr3	CDS	48692704	48692829	48692704	ID=MsG0380014031.01.T05:cds;Parent=MsG0380014031.01.T05
Chr3	mRNA	48692870	48692953	48692870	ID=MsG0380014031.01.T06;Parent=MsG0380014031.01;Name=MsG0380014031.01.T06;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|27
Chr3	exon	48692870	48692953	48692870	ID=MsG0380014031.01.T06:exon:14169;Parent=MsG0380014031.01.T06
Chr3	CDS	48692870	48692953	48692870	ID=MsG0380014031.01.T06:cds;Parent=MsG0380014031.01.T06
Chr3	mRNA	48693023	48693064	48693023	ID=MsG0380014031.01.T07;Parent=MsG0380014031.01;Name=MsG0380014031.01.T07;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|13
Chr3	exon	48693023	48693064	48693023	ID=MsG0380014031.01.T07:exon:14170;Parent=MsG0380014031.01.T07
Chr3	CDS	48693023	48693064	48693023	ID=MsG0380014031.01.T07:cds;Parent=MsG0380014031.01.T07

Gene Sequence

>MsG0380014031.01.T04

ATGAATGAAAGAAACAATGTTTTACGAAAAACATCTTTTTATTCTTCTCGAAATTATTATAGGTCTCAATTTATTCAACAATTGGATCGTTGGGGTTATCGTATTATTAGTCTGGGTTTTCTGTTTTTAACGATAGGTATTCTTTCAGGGGCAGTATGGGCTAACGAGGCATGGGGGTCCTATTGGAATTGGGATCCAAAGGAAACTTGGGCCTTTATTACTTGGACCATATTCGCGATTTATTTACATACTAGAAAAAATAAAAAATTTGAAGGTGTAAATTCTTCAATAGTGGCCTCTATCGGATTTCTTATAATTTGGATATGTTATTTGGGGATCAATCTATTAGGAATAGGACTACATAGTTATGGTTCATTTACATCTAATTAA

>MsG0380014031.01.T07

ATGTTATTTGGGGATCAATCTATTAGGAATAGGACTACATAG

>MsG0380014031.01.T02

ATGATGCACGTAAGTATGATGATATTGGGCTATGCAGCTCTTTTATGTGGATCATTATTATCAGTAGCTATTTTAGTCATTACGTTTCAAGAAGCCATCCAAATTCTTGCTTTTACCAAGAATTTGGATTTTTTAAATAAATCCGTTGATTTTGTCGAAATAAAATACATGAATATGAATGAAAGAAACAATGTTTTACGAAAAACATCTTTTTATTCTTCTCGAAATTATTATAGGTCTCAATTTATTCAACAATTGGATCGTTGGGGTTATCGTATTATTAGTCTGGGTTTTCTGTTTTTAACGATAGGTATTCTTTCAGGGGCAGTATGGGCTAACGAGGCATGGGGGTCCTATTGGAATTGGGATCCAAAGGAAACTTGGGCCTTTATTACTTGGACCATATTCGCGATTTATTTACATACTAGAAAAAATAAAAAATTTGAAGGTGTAAATTCTTCAATAGTGGCCTCTATCGGATTTCTTATAATTTGGATATGTTATTTGGGGATCAATCTATTAGGAATAGGACTACATAGTTATGGTTCATTTACATCTAATTAA

>MsG0380014031.01.T05

ATGAAAGAAACAATGTTTTACGAAAAACATCTTTTTATTCTTCTCGAAATTATTATAGGTCTCAATTTATTCAACAATTGGATCGTTGGGGTTATCGTATTATTAGTCTGGGTTTTCTGTTTTTAA

>MsG0380014031.01.T03

ATGATATTGGGCTATGCAGCTCTTTTATGTGGATCATTATTATCAGTAGCTATTTTAGTCATTACGTTTCAAGAAGCCATCCAAATTCTTGCTTTTACCAAGAATTTGGATTTTTTAAATAAATCCGTTGATTTTGTCGAAATAAAATACATGAATATGAATGAAAGAAACAATGTTTTACGAAAAACATCTTTTTATTCTTCTCGAAATTATTATAGGTCTCAATTTATTCAACAATTGGATCGTTGGGGTTATCGTATTATTAGTCTGGGTTTTCTGTTTTTAACGATAGGTATTCTTTCAGGGGCAGTATGGGCTAACGAGGCATGGGGGTCCTATTGGAATTGGGATCCAAAGGAAACTTGGGCCTTTATTACTTGGACCATATTCGCGATTTATTTACATACTAGAAAAAATAAAAAATTTGAAGGTGTAAATTCTTCAATAGTGGCCTCTATCGGATTTCTTATAATTTGGATATGTTATTTGGGGATCAATCTATTAGGAATAGGACTACATAGTTATGGTTCATTTACATCTAATTAA

>MsG0380014031.01.T06

ATGGGGGTCCTATTGGAATTGGGATCCAAAGGAAACTTGGGCCTTTATTACTTGGACCATATTCGCGATTTATTTACATACTAG

>MsG0380014031.01.T01

ATGATATTTTCAACTTTAGAGCATATATTAACTCATATATCGTTTTCCGTCATATCAATTGTTATTTCAATTCATTTGATAACCTTATTAGTCAATGAAATCGTAGGATTATATGATTTGTCCAAAAAAGCCATGATAATAACTTTTTTCTGTGTAACGGGATTGTTAATTACTCGTTGGTTTTTTTCGGGCCATTTACCATTTAGTGATTTATATGAATCACTAATCTTTCTTTCATGGGGTTTTTCCATTTTTCATATGGTTCCGTGTTTTAAAAAGGAAAAAAACCTTTTAAGTACAATAATCGCACCAAGTGTTATTTTTACCCAAGGCTTTGCGACTTCGGGTCTTTTAACCAAAATGCATCAATCTGTAATATTAGTACCCGCTCTACAATCCCATTGGCTAATGATGCACGTAAGTATGATGATATTGGGCTATGCAGCTCTTTTATGTGGATCATTATTATCAGTAGCTATTTTAGTCATTACGTTTCAAGAAGCCATCCAAATTCTTGCTTTTACCAAGAATTTGGATTTTTTAAATAAATCCGTTGATTTTGTCGAAATAAAATACATGAATATGAATGAAAGAAACAATGTTTTACGAAAAACATCTTTTTATTCTTCTCGAAATTATTATAGGTCTCAATTTATTCAACAATTGGATCGTTGGGGTTATCGTATTATTAGTCTGGGTTTTCTGTTTTTAACGATAGGTATTCTTTCAGGGGCAGTATGGGCTAACGAGGCATGGGGGTCCTATTGGAATTGGGATCCAAAGGAAACTTGGGCCTTTATTACTTGGACCATATTCGCGATTTATTTACATACTAGAAAAAATAAAAAATTTGAAGGTGTAAATTCTTCAATAGTGGCCTCTATCGGATTTCTTATAATTTGGATATGTTATTTGGGGATCAATCTATTAGGAATAGGACTACATAGTTATGGTTCATTTACATCTAATTAA

Protein sequence

>MsG0380014031.01.T04

MNERNNVLRKTSFYSSRNYYRSQFIQQLDRWGYRIISLGFLFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRKNKKFEGVNSSIVASIGFLIIWICYLGINLLGIGLHSYGSFTSN*

>MsG0380014031.01.T07

MLFGDQSIRNRTT*

>MsG0380014031.01.T02

MMHVSMMILGYAALLCGSLLSVAILVITFQEAIQILAFTKNLDFLNKSVDFVEIKYMNMNERNNVLRKTSFYSSRNYYRSQFIQQLDRWGYRIISLGFLFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRKNKKFEGVNSSIVASIGFLIIWICYLGINLLGIGLHSYGSFTSN*

>MsG0380014031.01.T05

MKETMFYEKHLFILLEIIIGLNLFNNWIVGVIVLLVWVFCF*

>MsG0380014031.01.T03

MILGYAALLCGSLLSVAILVITFQEAIQILAFTKNLDFLNKSVDFVEIKYMNMNERNNVLRKTSFYSSRNYYRSQFIQQLDRWGYRIISLGFLFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRKNKKFEGVNSSIVASIGFLIIWICYLGINLLGIGLHSYGSFTSN*

>MsG0380014031.01.T06

MGVLLELGSKGNLGLYYLDHIRDLFTY*

>MsG0380014031.01.T01

MIFSTLEHILTHISFSVISIVISIHLITLLVNEIVGLYDLSKKAMIITFFCVTGLLITRWFFSGHLPFSDLYESLIFLSWGFSIFHMVPCFKKEKNLLSTIIAPSVIFTQGFATSGLLTKMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQEAIQILAFTKNLDFLNKSVDFVEIKYMNMNERNNVLRKTSFYSSRNYYRSQFIQQLDRWGYRIISLGFLFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRKNKKFEGVNSSIVASIGFLIIWICYLGINLLGIGLHSYGSFTSN*