Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014026.01.T01 | YP_009141599.1 | 99.367 | 158 | 1 | 0 | 1 | 158 | 1 | 158 | 2.43E-113 | 328 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014026.01.T01 | B5LML3 | 98.101 | 158 | 3 | 0 | 1 | 158 | 1 | 158 | 8.88E-115 | 324 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014026.01.T01 | A0A4P8F221 | 99.367 | 158 | 1 | 0 | 1 | 158 | 1 | 158 | 1.16e-113 | 328 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047967.01 | MsG0380014026.01 | 0.854095 | 1.545902e-61 | 3.414372e-58 |
| MsG0080048059.01 | MsG0380014026.01 | 0.816554 | 5.208790e-52 | 3.702469e-49 |
| MsG0080048302.01 | MsG0380014026.01 | -0.823715 | 1.192832e-53 | 1.035317e-50 |
| MsG0080048560.01 | MsG0380014026.01 | 0.859333 | 4.447676e-63 | 1.170457e-59 |
| MsG0080048690.01 | MsG0380014026.01 | 0.890376 | 1.041953e-73 | 8.738245e-70 |
| MsG0080048691.01 | MsG0380014026.01 | 0.855899 | 4.628342e-62 | 1.085021e-58 |
| MsG0080048692.01 | MsG0380014026.01 | 0.921480 | 3.389795e-88 | 1.215762e-83 |
| MsG0080048693.01 | MsG0380014026.01 | 0.870665 | 1.229424e-66 | 4.820800e-63 |
| MsG0080048694.01 | MsG0380014026.01 | 0.856646 | 2.794851e-62 | 6.716046e-59 |
| MsG0080048695.01 | MsG0380014026.01 | 0.856276 | 3.588380e-62 | 8.518062e-59 |
| MsG0080048697.01 | MsG0380014026.01 | 0.872222 | 3.752666e-67 | 1.557745e-63 |
| MsG0080048698.01 | MsG0380014026.01 | 0.905708 | 3.227205e-80 | 5.284699e-76 |
| MsG0080048699.01 | MsG0380014026.01 | 0.911976 | 3.299447e-83 | 7.252740e-79 |
| MsG0080048800.01 | MsG0380014026.01 | 0.827754 | 1.313869e-54 | 1.280053e-51 |
| MsG0080048813.01 | MsG0380014026.01 | 0.826648 | 2.417381e-54 | 2.280615e-51 |
| MsG0080048978.01 | MsG0380014026.01 | 0.800078 | 1.706166e-48 | 7.872113e-46 |
| MsG0080049076.01 | MsG0380014026.01 | 0.902400 | 1.008226e-78 | 1.424929e-74 |
| MsG0180001072.01 | MsG0380014026.01 | 0.841407 | 4.842113e-58 | 7.108386e-55 |
| MsG0180001507.01 | MsG0380014026.01 | 0.818346 | 2.055999e-52 | 1.535205e-49 |
| MsG0180001925.01 | MsG0380014026.01 | 0.876923 | 9.488404e-69 | 4.683423e-65 |
| MsG0180002099.01 | MsG0380014026.01 | 0.819027 | 1.440699e-52 | 1.096198e-49 |
| MsG0180002214.01 | MsG0380014026.01 | 0.853316 | 2.589542e-61 | 5.572500e-58 |
| MsG0180002425.01 | MsG0380014026.01 | 0.807101 | 5.957394e-50 | 3.289084e-47 |
| MsG0180002426.01 | MsG0380014026.01 | 0.836872 | 7.254195e-57 | 9.262214e-54 |
| MsG0180002439.01 | MsG0380014026.01 | 0.834142 | 3.556563e-56 | 4.182775e-53 |
| MsG0180002546.01 | MsG0380014026.01 | 0.861515 | 9.720282e-64 | 2.757771e-60 |
| MsG0180003757.01 | MsG0380014026.01 | 0.822443 | 2.362918e-53 | 1.978094e-50 |
| MsG0180004226.01 | MsG0380014026.01 | 0.821672 | 3.565232e-53 | 2.919665e-50 |
| MsG0180004301.01 | MsG0380014026.01 | 0.845634 | 3.593358e-59 | 6.025989e-56 |
| MsG0180004435.01 | MsG0380014026.01 | 0.806165 | 9.388889e-50 | 5.060938e-47 |
| MsG0180004502.01 | MsG0380014026.01 | 0.806383 | 8.447169e-50 | 4.578400e-47 |
| MsG0180004505.01 | MsG0380014026.01 | 0.826796 | 2.228207e-54 | 2.111120e-51 |
| MsG0180004506.01 | MsG0380014026.01 | 0.835329 | 1.787427e-56 | 2.178907e-53 |
| MsG0180004507.01 | MsG0380014026.01 | 0.801974 | 6.989753e-49 | 3.383489e-46 |
| MsG0180004553.01 | MsG0380014026.01 | 0.801083 | 1.064424e-48 | 5.038230e-46 |
| MsG0180004586.01 | MsG0380014026.01 | 0.818860 | 1.572146e-52 | 1.190687e-49 |
| MsG0180004761.01 | MsG0380014026.01 | 0.833772 | 4.400960e-56 | 5.119380e-53 |
| MsG0180004957.01 | MsG0380014026.01 | 0.812371 | 4.385333e-51 | 2.783255e-48 |
| MsG0180005791.01 | MsG0380014026.01 | 0.842160 | 3.064604e-58 | 4.605781e-55 |
| MsG0180005817.01 | MsG0380014026.01 | 0.844015 | 9.822075e-59 | 1.564896e-55 |
| MsG0180006212.01 | MsG0380014026.01 | 0.825462 | 4.627636e-54 | 4.220579e-51 |
| MsG0280006336.01 | MsG0380014026.01 | 0.804171 | 2.455172e-49 | 1.257234e-46 |
| MsG0280006452.01 | MsG0380014026.01 | 0.810917 | 9.079421e-51 | 5.543866e-48 |
| MsG0280010695.01 | MsG0380014026.01 | 0.867869 | 9.957224e-66 | 3.529446e-62 |
| MsG0280010780.01 | MsG0380014026.01 | 0.835299 | 1.819124e-56 | 2.215581e-53 |
| MsG0280011299.01 | MsG0380014026.01 | 0.803264 | 3.788287e-49 | 1.895171e-46 |
| MsG0280011301.01 | MsG0380014026.01 | 0.816433 | 5.545635e-52 | 3.928741e-49 |
| MsG0380012281.01 | MsG0380014026.01 | 0.815059 | 1.122257e-51 | 7.657358e-49 |
| MsG0380013114.01 | MsG0380014026.01 | 0.800943 | 1.136808e-48 | 5.361773e-46 |
| MsG0380013448.01 | MsG0380014026.01 | 0.891953 | 2.478819e-74 | 2.218613e-70 |
| MsG0380013473.01 | MsG0380014026.01 | 0.819773 | 9.741140e-53 | 7.566893e-50 |
| MsG0380013887.01 | MsG0380014026.01 | 0.816799 | 4.591030e-52 | 3.285280e-49 |
| MsG0380013888.01 | MsG0380014026.01 | 0.951822 | 9.055697e-110 | 2.132425e-104 |
| MsG0380013890.01 | MsG0380014026.01 | 0.835063 | 2.086526e-56 | 2.522760e-53 |
| MsG0380013892.01 | MsG0380014026.01 | 0.851635 | 7.805691e-61 | 1.589903e-57 |
| MsG0380013914.01 | MsG0380014026.01 | 0.831581 | 1.538978e-55 | 1.677308e-52 |
| MsG0380013916.01 | MsG0380014026.01 | 0.836519 | 8.924222e-57 | 1.127314e-53 |
| MsG0380013917.01 | MsG0380014026.01 | 0.865458 | 5.819134e-65 | 1.894667e-61 |
| MsG0380013918.01 | MsG0380014026.01 | 0.842773 | 2.106426e-58 | 3.227209e-55 |
| MsG0380013919.01 | MsG0380014026.01 | 0.814380 | 1.586685e-51 | 1.063033e-48 |
| MsG0380013920.01 | MsG0380014026.01 | 0.818353 | 2.049347e-52 | 1.530518e-49 |
| MsG0380013921.01 | MsG0380014026.01 | 0.862803 | 3.913274e-64 | 1.160935e-60 |
| MsG0380013923.01 | MsG0380014026.01 | 0.879291 | 1.405043e-69 | 7.576461e-66 |
| MsG0380013925.01 | MsG0380014026.01 | 0.819203 | 1.313587e-52 | 1.004247e-49 |
| MsG0380013926.01 | MsG0380014026.01 | 0.978884 | 9.078168e-147 | 1.864528e-140 |
| MsG0380013928.01 | MsG0380014026.01 | 0.852695 | 3.899924e-61 | 8.216832e-58 |
| MsG0380013929.01 | MsG0380014026.01 | 0.895720 | 7.332146e-76 | 7.695244e-72 |
| MsG0380013931.01 | MsG0380014026.01 | 0.912910 | 1.132358e-83 | 2.608369e-79 |
| MsG0380013932.01 | MsG0380014026.01 | 0.817388 | 3.384640e-52 | 2.461580e-49 |
| MsG0380013934.01 | MsG0380014026.01 | 0.818694 | 1.714913e-52 | 1.292733e-49 |
| MsG0380013935.01 | MsG0380014026.01 | 0.832510 | 9.074669e-56 | 1.016468e-52 |
| MsG0380013940.01 | MsG0380014026.01 | 0.914461 | 1.864929e-84 | 4.640327e-80 |
| MsG0380013941.01 | MsG0380014026.01 | 0.979581 | 2.775823e-148 | 6.067784e-142 |
| MsG0380013942.01 | MsG0380014026.01 | 0.921225 | 4.699593e-88 | 1.660126e-83 |
| MsG0380013943.01 | MsG0380014026.01 | 0.917477 | 5.065413e-86 | 1.464928e-81 |
| MsG0380013944.01 | MsG0380014026.01 | 0.903213 | 4.374623e-79 | 6.411117e-75 |
| MsG0380013945.01 | MsG0380014026.01 | 0.920255 | 1.612296e-87 | 5.414627e-83 |
| MsG0380013946.01 | MsG0380014026.01 | 0.813985 | 1.939410e-51 | 1.285380e-48 |
| MsG0380013948.01 | MsG0380014026.01 | 0.826630 | 2.441995e-54 | 2.302644e-51 |
| MsG0380013951.01 | MsG0380014026.01 | 0.929234 | 9.309246e-93 | 5.140255e-88 |
| MsG0380013952.01 | MsG0380014026.01 | 0.888126 | 7.781261e-73 | 5.949741e-69 |
| MsG0380013953.01 | MsG0380014026.01 | 0.909888 | 3.458527e-82 | 6.877674e-78 |
| MsG0380013954.01 | MsG0380014026.01 | 0.859782 | 3.258300e-63 | 8.707884e-60 |
| MsG0380013956.01 | MsG0380014026.01 | 0.879219 | 1.489717e-69 | 8.011506e-66 |
| MsG0380013957.01 | MsG0380014026.01 | 0.907467 | 4.913202e-81 | 8.725978e-77 |
| MsG0380013959.01 | MsG0380014026.01 | 0.803334 | 3.663009e-49 | 1.835791e-46 |
| MsG0380013961.01 | MsG0380014026.01 | 0.878778 | 2.132409e-69 | 1.127551e-65 |
| MsG0380013962.01 | MsG0380014026.01 | 0.883430 | 4.518299e-71 | 2.863371e-67 |
| MsG0380013964.01 | MsG0380014026.01 | 0.803376 | 3.589968e-49 | 1.801135e-46 |
| MsG0380013966.01 | MsG0380014026.01 | 0.936444 | 1.719018e-97 | 1.467951e-92 |
| MsG0380013967.01 | MsG0380014026.01 | 0.909678 | 4.367982e-82 | 8.596209e-78 |
| MsG0380013968.01 | MsG0380014026.01 | 0.925714 | 1.260798e-90 | 5.708079e-86 |
| MsG0380013969.01 | MsG0380014026.01 | 0.892516 | 1.477756e-74 | 1.355999e-70 |
| MsG0380013971.01 | MsG0380014026.01 | 0.903928 | 2.088586e-79 | 3.155215e-75 |
| MsG0380013972.01 | MsG0380014026.01 | 0.882557 | 9.423857e-71 | 5.766047e-67 |
| MsG0380013975.01 | MsG0380014026.01 | 0.877381 | 6.575554e-69 | 3.299875e-65 |
| MsG0380013977.01 | MsG0380014026.01 | 0.915073 | 9.070191e-85 | 2.328788e-80 |
| MsG0380013978.01 | MsG0380014026.01 | 0.828043 | 1.119551e-54 | 1.100120e-51 |
| MsG0380013981.01 | MsG0380014026.01 | 0.880989 | 3.484403e-70 | 2.005973e-66 |
| MsG0380013983.01 | MsG0380014026.01 | 0.834324 | 3.200659e-56 | 3.785813e-53 |
| MsG0380013984.01 | MsG0380014026.01 | 0.825562 | 4.381300e-54 | 4.007503e-51 |
| MsG0380013985.01 | MsG0380014026.01 | 0.800197 | 1.613679e-48 | 7.467660e-46 |
| MsG0380013986.01 | MsG0380014026.01 | 0.835690 | 1.448688e-56 | 1.785108e-53 |
| MsG0380013995.01 | MsG0380014026.01 | 0.857646 | 1.416691e-62 | 3.521139e-59 |
| MsG0380013997.01 | MsG0380014026.01 | 0.840488 | 8.436482e-58 | 1.203606e-54 |
| MsG0380013999.01 | MsG0380014026.01 | 0.871193 | 8.235218e-67 | 3.292438e-63 |
| MsG0380014004.01 | MsG0380014026.01 | 0.860597 | 1.848343e-63 | 5.080272e-60 |
| MsG0380014005.01 | MsG0380014026.01 | 0.914247 | 2.396965e-84 | 5.900007e-80 |
| MsG0380014006.01 | MsG0380014026.01 | 0.904081 | 1.781368e-79 | 2.711225e-75 |
| MsG0380014008.01 | MsG0380014026.01 | 0.869063 | 4.098309e-66 | 1.516987e-62 |
| MsG0380014016.01 | MsG0380014026.01 | 0.827258 | 1.728264e-54 | 1.659822e-51 |
| MsG0380014017.01 | MsG0380014026.01 | 0.884918 | 1.271231e-71 | 8.547892e-68 |
| MsG0380014018.01 | MsG0380014026.01 | 0.896624 | 3.086033e-76 | 3.365584e-72 |
| MsG0380014020.01 | MsG0380014026.01 | 0.878043 | 3.863848e-69 | 1.987012e-65 |
| MsG0380014021.01 | MsG0380014026.01 | 0.856408 | 3.282128e-62 | 7.826529e-59 |
| MsG0380014023.01 | MsG0380014026.01 | 0.909465 | 5.528457e-82 | 1.076781e-77 |
| MsG0380014024.01 | MsG0380014026.01 | 0.845906 | 3.032417e-59 | 5.130930e-56 |
| MsG0380014026.01 | MsG0380014027.01 | 0.806460 | 8.138854e-50 | 4.420165e-47 |
| MsG0380014026.01 | MsG0380014028.01 | 0.803369 | 3.602615e-49 | 1.807120e-46 |
| MsG0380014026.01 | MsG0380014029.01 | 0.847105 | 1.427459e-59 | 2.510557e-56 |
| MsG0380014026.01 | MsG0380014031.01 | 0.818314 | 2.090739e-52 | 1.559652e-49 |
| MsG0380014026.01 | MsG0380014032.01 | 0.917959 | 2.807669e-86 | 8.332884e-82 |
| MsG0380014026.01 | MsG0380014033.01 | 0.929966 | 3.247060e-93 | 1.868021e-88 |
| MsG0380014026.01 | MsG0380014034.01 | 0.841803 | 3.807027e-58 | 5.657480e-55 |
| MsG0380014026.01 | MsG0380014036.01 | 0.816526 | 5.283616e-52 | 3.752934e-49 |
| MsG0380014026.01 | MsG0380014039.01 | 0.900361 | 7.908217e-78 | 1.019634e-73 |
| MsG0380014026.01 | MsG0380014040.01 | 0.891629 | 3.335197e-74 | 2.947838e-70 |
| MsG0380014026.01 | MsG0380014044.01 | 0.811736 | 6.030798e-51 | 3.762635e-48 |
| MsG0380014026.01 | MsG0380014046.01 | 0.832611 | 8.565990e-56 | 9.623761e-53 |
| MsG0380014026.01 | MsG0380014050.01 | 0.811761 | 5.955422e-51 | 3.718016e-48 |
| MsG0380014026.01 | MsG0380014051.01 | 0.903469 | 3.360892e-79 | 4.981743e-75 |
| MsG0380014026.01 | MsG0380014054.01 | 0.860672 | 1.754502e-63 | 4.834874e-60 |
| MsG0380014026.01 | MsG0380014057.01 | 0.871200 | 8.190836e-67 | 3.275657e-63 |
| MsG0380014026.01 | MsG0380014129.01 | 0.801757 | 7.745616e-49 | 3.728804e-46 |
| MsG0380014026.01 | MsG0380015201.01 | 0.821070 | 4.909891e-53 | 3.954170e-50 |
| MsG0380014026.01 | MsG0380015271.01 | 0.805190 | 1.504541e-49 | 7.909209e-47 |
| MsG0380014026.01 | MsG0380015348.01 | 0.853485 | 2.316296e-61 | 5.012707e-58 |
| MsG0380014026.01 | MsG0380015439.01 | 0.812866 | 3.416658e-51 | 2.196871e-48 |
| MsG0380014026.01 | MsG0380015697.01 | 0.803681 | 3.104786e-49 | 1.569940e-46 |
| MsG0380014026.01 | MsG0380015752.01 | 0.803570 | 3.272613e-49 | 1.650279e-46 |
| MsG0380014026.01 | MsG0380016424.01 | 0.835656 | 1.477693e-56 | 1.818830e-53 |
| MsG0380014026.01 | MsG0380016790.01 | 0.817021 | 4.091860e-52 | 2.946239e-49 |
| MsG0380014026.01 | MsG0380016881.01 | 0.813999 | 1.925715e-51 | 1.276821e-48 |
| MsG0380014026.01 | MsG0380016889.01 | 0.809647 | 1.706215e-50 | 1.007412e-47 |
| MsG0380014026.01 | MsG0380016931.01 | 0.826019 | 3.413114e-54 | 3.163008e-51 |
| MsG0380014026.01 | MsG0380016935.01 | 0.816184 | 6.303567e-52 | 4.435745e-49 |
| MsG0380014026.01 | MsG0380017007.01 | 0.920724 | 8.905228e-88 | 3.066102e-83 |
| MsG0380014026.01 | MsG0380017405.01 | 0.841211 | 5.452077e-58 | 7.953837e-55 |
| MsG0380014026.01 | MsG0380017406.01 | 0.828885 | 7.010780e-55 | 7.058849e-52 |
| MsG0380014026.01 | MsG0380017904.01 | 0.809655 | 1.699228e-50 | 1.003489e-47 |
| MsG0380014026.01 | MsG0380017962.01 | 0.816458 | 5.474099e-52 | 3.880695e-49 |
| MsG0380014026.01 | MsG0380018047.01 | 0.825004 | 5.935598e-54 | 5.344245e-51 |
| MsG0380014026.01 | MsG0480018296.01 | 0.913089 | 9.210539e-84 | 2.141076e-79 |
| MsG0380014026.01 | MsG0480018628.01 | 0.808028 | 3.788124e-50 | 2.142652e-47 |
| MsG0380014026.01 | MsG0480019028.01 | 0.813587 | 2.373080e-51 | 1.556019e-48 |
| MsG0380014026.01 | MsG0480019668.01 | 0.802076 | 6.660255e-49 | 3.232547e-46 |
| MsG0380014026.01 | MsG0480019861.01 | 0.808138 | 3.588891e-50 | 2.035921e-47 |
| MsG0380014026.01 | MsG0480019975.01 | 0.831447 | 1.660631e-55 | 1.802645e-52 |
| MsG0380014026.01 | MsG0480020052.01 | 0.860644 | 1.789176e-63 | 4.925495e-60 |
| MsG0380014026.01 | MsG0480021054.01 | 0.843469 | 1.374488e-58 | 2.152658e-55 |
| MsG0380014026.01 | MsG0480021205.01 | 0.815880 | 7.370578e-52 | 5.143290e-49 |
| MsG0380014026.01 | MsG0480021327.01 | 0.846349 | 2.296733e-59 | 3.941830e-56 |
| MsG0380014026.01 | MsG0480021331.01 | 0.857068 | 2.098905e-62 | 5.116219e-59 |
| MsG0380014026.01 | MsG0480021476.01 | 0.849857 | 2.469747e-60 | 4.746510e-57 |
| MsG0380014026.01 | MsG0480021912.01 | 0.858558 | 7.585333e-63 | 1.943592e-59 |
| MsG0380014026.01 | MsG0480022125.01 | -0.820042 | 8.450708e-53 | 6.614210e-50 |
| MsG0380014026.01 | MsG0480022591.01 | 0.854432 | 1.236126e-61 | 2.760005e-58 |
| MsG0380014026.01 | MsG0480023152.01 | 0.805293 | 1.431887e-49 | 7.547147e-47 |
| MsG0380014026.01 | MsG0480023480.01 | 0.818293 | 2.113969e-52 | 1.576047e-49 |
| MsG0380014026.01 | MsG0480023481.01 | 0.816918 | 4.316318e-52 | 3.098930e-49 |
| MsG0380014026.01 | MsG0580024309.01 | 0.809295 | 2.031119e-50 | 1.188001e-47 |
| MsG0380014026.01 | MsG0580024493.01 | 0.804220 | 2.398018e-49 | 1.229482e-46 |
| MsG0380014026.01 | MsG0580024570.01 | 0.857946 | 1.153916e-62 | 2.897235e-59 |
| MsG0380014026.01 | MsG0580025573.01 | -0.806165 | 9.392715e-50 | 5.062908e-47 |
| MsG0380014026.01 | MsG0580027677.01 | 0.918386 | 1.660965e-86 | 5.042061e-82 |
| MsG0380014026.01 | MsG0580029583.01 | -0.848052 | 7.834178e-60 | 1.419719e-56 |
| MsG0380014026.01 | MsG0580029792.01 | 0.813538 | 2.432861e-51 | 1.593139e-48 |
| MsG0380014026.01 | MsG0580030197.01 | 0.818965 | 1.488502e-52 | 1.130643e-49 |
| MsG0380014026.01 | MsG0580030237.01 | 0.816993 | 4.151722e-52 | 2.987104e-49 |
| MsG0380014026.01 | MsG0680030439.01 | 0.847684 | 9.894884e-60 | 1.772775e-56 |
| MsG0380014026.01 | MsG0680030756.01 | 0.803742 | 3.015420e-49 | 1.527207e-46 |
| MsG0380014026.01 | MsG0680031813.01 | 0.824969 | 6.050484e-54 | 5.442035e-51 |
| MsG0380014026.01 | MsG0680034229.01 | 0.820708 | 5.947346e-53 | 4.741019e-50 |
| MsG0380014026.01 | MsG0680035841.01 | -0.813789 | 2.142797e-51 | 1.412696e-48 |
| MsG0380014026.01 | MsG0680035842.01 | -0.802144 | 6.449693e-49 | 3.135757e-46 |
| MsG0380014026.01 | MsG0780036068.01 | 0.816490 | 5.382705e-52 | 3.819341e-49 |
| MsG0380014026.01 | MsG0780037988.01 | 0.803252 | 3.809717e-49 | 1.905321e-46 |
| MsG0380014026.01 | MsG0780038047.01 | 0.842252 | 2.896337e-58 | 4.365826e-55 |
| MsG0380014026.01 | MsG0780038197.01 | 0.881382 | 2.515584e-70 | 1.470501e-66 |
| MsG0380014026.01 | MsG0780038198.01 | 0.807107 | 5.939193e-50 | 3.279568e-47 |
| MsG0380014026.01 | MsG0780039190.01 | -0.801055 | 1.078528e-48 | 5.101432e-46 |
| MsG0380014026.01 | MsG0780039821.01 | 0.808441 | 3.092113e-50 | 1.768233e-47 |
| MsG0380014026.01 | MsG0780039836.01 | 0.800958 | 1.128707e-48 | 5.325671e-46 |
| MsG0380014026.01 | MsG0780039838.01 | 0.822383 | 2.438925e-53 | 2.038355e-50 |
| MsG0380014026.01 | MsG0780039839.01 | 0.818580 | 1.820199e-52 | 1.367803e-49 |
| MsG0380014026.01 | MsG0780040121.01 | 0.834921 | 2.266305e-56 | 2.728751e-53 |
| MsG0380014026.01 | MsG0780040316.01 | 0.850965 | 1.207034e-60 | 2.405707e-57 |
| MsG0380014026.01 | MsG0780040317.01 | 0.810325 | 1.219021e-50 | 7.326180e-48 |
| MsG0380014026.01 | MsG0780040480.01 | -0.815470 | 9.093465e-52 | 6.275511e-49 |
| MsG0380014026.01 | MsG0780041121.01 | 0.814297 | 1.654924e-51 | 1.106261e-48 |
| MsG0380014026.01 | MsG0780041173.01 | 0.818906 | 1.534833e-52 | 1.163925e-49 |
| MsG0380014026.01 | MsG0780041254.01 | 0.814376 | 1.589957e-51 | 1.065074e-48 |
| MsG0380014026.01 | MsG0780041296.01 | 0.817921 | 2.566570e-52 | 1.894062e-49 |
| MsG0380014026.01 | MsG0780041637.01 | 0.835977 | 1.225620e-56 | 1.523201e-53 |
| MsG0380014026.01 | MsG0780041720.01 | 0.832009 | 1.206672e-55 | 1.331817e-52 |
| MsG0380014026.01 | MsG0780041783.01 | 0.832407 | 9.623862e-56 | 1.074708e-52 |
| MsG0380014026.01 | MsG0880042291.01 | 0.818908 | 1.533317e-52 | 1.162843e-49 |
| MsG0380014026.01 | MsG0880042858.01 | 0.810465 | 1.137165e-50 | 6.859578e-48 |
| MsG0380014026.01 | MsG0880043063.01 | 0.805002 | 1.646907e-49 | 8.616023e-47 |
| MsG0380014026.01 | MsG0880043069.01 | 0.818442 | 1.956069e-52 | 1.464508e-49 |
| MsG0380014026.01 | MsG0880043824.01 | -0.801206 | 1.004438e-48 | 4.768789e-46 |
| MsG0380014026.01 | MsG0880044440.01 | 0.822083 | 2.864032e-53 | 2.372857e-50 |
| MsG0380014026.01 | MsG0880045097.01 | 0.869845 | 2.281875e-66 | 8.689046e-63 |
| MsG0380014026.01 | MsG0880045188.01 | 0.851339 | 9.465622e-61 | 1.909974e-57 |
| MsG0380014026.01 | MsG0880045369.01 | 0.810002 | 1.431421e-50 | 8.530716e-48 |
| MsG0380014026.01 | MsG0880045385.01 | 0.822432 | 2.376489e-53 | 1.988886e-50 |
| MsG0380014026.01 | MsG0880045413.01 | 0.812993 | 3.205267e-51 | 2.068039e-48 |
| MsG0380014026.01 | MsG0880045630.01 | 0.872731 | 2.538340e-67 | 1.073802e-63 |
| MsG0380014026.01 | MsG0880046099.01 | 0.814142 | 1.791388e-51 | 1.192382e-48 |
| MsG0380014026.01 | MsG0880046219.01 | 0.816511 | 5.326828e-52 | 3.781860e-49 |
| MsG0380014026.01 | MsG0880046469.01 | 0.838881 | 2.209393e-57 | 2.999500e-54 |
| MsG0380014026.01 | MsG0880046630.01 | 0.804849 | 1.773320e-49 | 9.241356e-47 |
| MsG0380014026.01 | MsG0880047318.01 | 0.830508 | 2.823023e-55 | 2.980192e-52 |
| MsG0280006475.01 | MsG0380014026.01 | 0.858476 | 8.027499e-63 | 2.051437e-59 |
| MsG0280007649.01 | MsG0380014026.01 | 0.801144 | 1.034245e-48 | 4.902823e-46 |
| MsG0280007650.01 | MsG0380014026.01 | 0.808231 | 3.428504e-50 | 1.949742e-47 |
| MsG0280007759.01 | MsG0380014026.01 | -0.810287 | 1.242287e-50 | 7.458399e-48 |
| MsG0280007760.01 | MsG0380014026.01 | -0.806922 | 6.501230e-50 | 3.572821e-47 |
| MsG0280008820.01 | MsG0380014026.01 | 0.816012 | 6.884114e-52 | 4.821646e-49 |
| MsG0280008912.01 | MsG0380014026.01 | 0.803317 | 3.693939e-49 | 1.850443e-46 |
| MsG0280009541.01 | MsG0380014026.01 | 0.820093 | 8.228126e-53 | 6.449392e-50 |
| MsG0280009733.01 | MsG0380014026.01 | 0.825143 | 5.504176e-54 | 4.975448e-51 |
| MsG0280009742.01 | MsG0380014026.01 | 0.815744 | 7.903743e-52 | 5.495484e-49 |
| MsG0280009776.01 | MsG0380014026.01 | 0.806412 | 8.329215e-50 | 4.517850e-47 |
| MsG0280009864.01 | MsG0380014026.01 | 0.811547 | 6.629117e-51 | 4.115318e-48 |
| MsG0280009971.01 | MsG0380014026.01 | -0.855748 | 5.122810e-62 | 1.194964e-58 |
| MsG0280010137.01 | MsG0380014026.01 | 0.860125 | 2.567767e-63 | 6.944942e-60 |
| MsG0280010140.01 | MsG0380014026.01 | 0.854122 | 1.518996e-61 | 3.357945e-58 |
| MsG0280010142.01 | MsG0380014026.01 | 0.841663 | 4.145650e-58 | 6.133946e-55 |
| MsG0280010143.01 | MsG0380014026.01 | 0.850151 | 2.044202e-60 | 3.966743e-57 |
| MsG0280010144.01 | MsG0380014026.01 | 0.842504 | 2.484048e-58 | 3.774284e-55 |
| MsG0280010145.01 | MsG0380014026.01 | 0.913527 | 5.549022e-84 | 1.318230e-79 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014026.01.T01 | MTR_7g021800 | 98.734 | 158 | 2 | 0 | 1 | 158 | 1 | 158 | 1.31e-116 | 326 |
| MsG0380014026.01.T01 | MTR_4g035040 | 98.734 | 158 | 2 | 0 | 1 | 158 | 1 | 158 | 1.31e-116 | 326 |
| MsG0380014026.01.T01 | MTR_0002s0630 | 87.261 | 157 | 20 | 0 | 2 | 158 | 162 | 318 | 6.98e-102 | 295 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014026.01.T01 | ATCG00420 | 88.608 | 158 | 18 | 0 | 1 | 158 | 1 | 158 | 8.74e-106 | 299 |
Find 26 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGAATAGTTCATAGATCTT+TGG | 0.225646 | 3:+48680435 | MsG0380014026.01.T01:CDS |
| GGCCATCCTATCCAACTTTC+GGG | 0.254679 | 3:-48680799 | None:intergenic |
| GGAATAGTTCATAGATCTTT+GGG | 0.328701 | 3:+48680436 | MsG0380014026.01.T01:CDS |
| AGGCCATCCTATCCAACTTT+CGG | 0.340000 | 3:-48680800 | None:intergenic |
| TTCCAAACCCAGAAAATAGA+AGG | 0.366444 | 3:-48680691 | None:intergenic |
| TTTGTAAAGTCTTTATTCCT+TGG | 0.398764 | 3:-48680468 | None:intergenic |
| TGCAGGGTCATTTGTCTGCT+TGG | 0.409987 | 3:+48680401 | MsG0380014026.01.T01:CDS |
| AGGGAATCTTATGATATGTT+AGG | 0.415137 | 3:+48680733 | MsG0380014026.01.T01:CDS |
| TGCTACATCATAGGCACATT+GGG | 0.447727 | 3:-48680557 | None:intergenic |
| TCCTCCTGGTGCTACATCAT+AGG | 0.453068 | 3:-48680566 | None:intergenic |
| TACAAATAAAGCCCGAGGAT+TGG | 0.464528 | 3:+48680485 | MsG0380014026.01.T01:CDS |
| CAGAAAATAGAAGGAATTCT+CGG | 0.478109 | 3:-48680682 | None:intergenic |
| AGCAATCGAATGCCAATCCT+CGG | 0.513209 | 3:-48680497 | None:intergenic |
| TGCCCGAAAGTTGGATAGGA+TGG | 0.516198 | 3:+48680797 | MsG0380014026.01.T01:CDS |
| GTGCTACATCATAGGCACAT+TGG | 0.546406 | 3:-48680558 | None:intergenic |
| TTAATGCCCGAAAGTTGGAT+AGG | 0.556642 | 3:+48680793 | MsG0380014026.01.T01:CDS |
| ACACTAGCTAATAGTCCTCC+TGG | 0.563367 | 3:-48680580 | None:intergenic |
| GCAATCGAATGCCAATCCTC+GGG | 0.577805 | 3:-48680496 | None:intergenic |
| TGTGCCTATGATGTAGCACC+AGG | 0.591745 | 3:+48680562 | MsG0380014026.01.T01:CDS |
| GCGATATAATCTTTACGCAA+AGG | 0.602633 | 3:-48680820 | None:intergenic |
| GCATAAAAGTATTTGCCCCA+AGG | 0.613297 | 3:+48680653 | MsG0380014026.01.T01:CDS |
| TAGTTTAGATCAACCCGAAG+AGG | 0.615869 | 3:+48680627 | MsG0380014026.01.T01:CDS |
| GACTTTACAAATAAAGCCCG+AGG | 0.617607 | 3:+48680480 | MsG0380014026.01.T01:CDS |
| ATTAAAATACGTTTCAGACG+CGG | 0.619896 | 3:-48680775 | None:intergenic |
| TCTGCTTGGCTAGTCAAACA+CGG | 0.639180 | 3:+48680415 | MsG0380014026.01.T01:CDS |
| GCCTATGATGTAGCACCAGG+AGG | 0.695694 | 3:+48680565 | MsG0380014026.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCCTGTATTTCATAAAAAT+TGG | - | Chr3:48680848-48680867 | None:intergenic | 20.0% |
| !! | TCCTGTATTTCATAAAAATT+GGG | - | Chr3:48680847-48680866 | None:intergenic | 20.0% |
| !!! | GCTGTTATTTTATATGTATA+TGG | + | Chr3:48680517-48680536 | MsG0380014026.01.T01:CDS | 20.0% |
| ! | CCTGTATTTCATAAAAATTG+GGG | - | Chr3:48680846-48680865 | None:intergenic | 25.0% |
| ! | CTGTATTTCATAAAAATTGG+GGG | - | Chr3:48680845-48680864 | None:intergenic | 25.0% |
| ! | TTTGTAAAGTCTTTATTCCT+TGG | - | Chr3:48680471-48680490 | None:intergenic | 25.0% |
| AGGGAATCTTATGATATGTT+AGG | + | Chr3:48680733-48680752 | MsG0380014026.01.T01:CDS | 30.0% | |
| ATTAAAATACGTTTCAGACG+CGG | - | Chr3:48680778-48680797 | None:intergenic | 30.0% | |
| CAGAAAATAGAAGGAATTCT+CGG | - | Chr3:48680685-48680704 | None:intergenic | 30.0% | |
| GGAATAGTTCATAGATCTTT+GGG | + | Chr3:48680436-48680455 | MsG0380014026.01.T01:CDS | 30.0% | |
| ! | CCCCAATTTTTATGAAATAC+AGG | + | Chr3:48680843-48680862 | MsG0380014026.01.T01:CDS | 30.0% |
| ! | GAGAATTCCTTCTATTTTCT+GGG | + | Chr3:48680684-48680703 | MsG0380014026.01.T01:CDS | 30.0% |
| ! | TACTTTTATGCATACCTCTT+CGG | - | Chr3:48680644-48680663 | None:intergenic | 30.0% |
| !!! | AAAGTGCTGATTTTCAAGAA+AGG | + | Chr3:48680713-48680732 | MsG0380014026.01.T01:CDS | 30.0% |
| !!! | AAGTGCTGATTTTCAAGAAA+GGG | + | Chr3:48680714-48680733 | MsG0380014026.01.T01:CDS | 30.0% |
| CGGAATAGTTCATAGATCTT+TGG | + | Chr3:48680435-48680454 | MsG0380014026.01.T01:CDS | 35.0% | |
| GCGATATAATCTTTACGCAA+AGG | - | Chr3:48680823-48680842 | None:intergenic | 35.0% | |
| TTCCAAACCCAGAAAATAGA+AGG | - | Chr3:48680694-48680713 | None:intergenic | 35.0% | |
| ! | ACTTTTATGCATACCTCTTC+GGG | - | Chr3:48680643-48680662 | None:intergenic | 35.0% |
| ! | CGAGAATTCCTTCTATTTTC+TGG | + | Chr3:48680683-48680702 | MsG0380014026.01.T01:CDS | 35.0% |
| ! | TTCCTTCTATTTTCTGGGTT+TGG | + | Chr3:48680689-48680708 | MsG0380014026.01.T01:CDS | 35.0% |
| !!! | GTATTTTAATGCCCGAAAGT+TGG | + | Chr3:48680788-48680807 | MsG0380014026.01.T01:CDS | 35.0% |
| !!! | TCTTTGGGTTTTGATTACCA+AGG | + | Chr3:48680451-48680470 | MsG0380014026.01.T01:CDS | 35.0% |
| GACTTTACAAATAAAGCCCG+AGG | + | Chr3:48680480-48680499 | MsG0380014026.01.T01:CDS | 40.0% | |
| TACAAATAAAGCCCGAGGAT+TGG | + | Chr3:48680485-48680504 | MsG0380014026.01.T01:CDS | 40.0% | |
| TAGTTTAGATCAACCCGAAG+AGG | + | Chr3:48680627-48680646 | MsG0380014026.01.T01:CDS | 40.0% | |
| TGCTACATCATAGGCACATT+GGG | - | Chr3:48680560-48680579 | None:intergenic | 40.0% | |
| TTAATGCCCGAAAGTTGGAT+AGG | + | Chr3:48680793-48680812 | MsG0380014026.01.T01:CDS | 40.0% | |
| ! | AATTCTCGGATTTTGCCTTG+GGG | - | Chr3:48680671-48680690 | None:intergenic | 40.0% |
| ! | GAATTCTCGGATTTTGCCTT+GGG | - | Chr3:48680672-48680691 | None:intergenic | 40.0% |
| !! | GCATAAAAGTATTTGCCCCA+AGG | + | Chr3:48680653-48680672 | MsG0380014026.01.T01:CDS | 40.0% |
| ACACTAGCTAATAGTCCTCC+TGG | - | Chr3:48680583-48680602 | None:intergenic | 45.0% | |
| AGCAATCGAATGCCAATCCT+CGG | - | Chr3:48680500-48680519 | None:intergenic | 45.0% | |
| AGGCCATCCTATCCAACTTT+CGG | - | Chr3:48680803-48680822 | None:intergenic | 45.0% | |
| GTGCTACATCATAGGCACAT+TGG | - | Chr3:48680561-48680580 | None:intergenic | 45.0% | |
| ! | GGAATTCTCGGATTTTGCCT+TGG | - | Chr3:48680673-48680692 | None:intergenic | 45.0% |
| ! | TCTGCTTGGCTAGTCAAACA+CGG | + | Chr3:48680415-48680434 | MsG0380014026.01.T01:CDS | 45.0% |
| GCAATCGAATGCCAATCCTC+GGG | - | Chr3:48680499-48680518 | None:intergenic | 50.0% | |
| GGCCATCCTATCCAACTTTC+GGG | - | Chr3:48680802-48680821 | None:intergenic | 50.0% | |
| TGCAGGGTCATTTGTCTGCT+TGG | + | Chr3:48680401-48680420 | MsG0380014026.01.T01:CDS | 50.0% | |
| TGCCCGAAAGTTGGATAGGA+TGG | + | Chr3:48680797-48680816 | MsG0380014026.01.T01:CDS | 50.0% | |
| TGTGCCTATGATGTAGCACC+AGG | + | Chr3:48680562-48680581 | MsG0380014026.01.T01:CDS | 50.0% | |
| !! | TCCTCCTGGTGCTACATCAT+AGG | - | Chr3:48680569-48680588 | None:intergenic | 50.0% |
| GCCTATGATGTAGCACCAGG+AGG | + | Chr3:48680565-48680584 | MsG0380014026.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 48680400 | 48680876 | 48680400 | ID=MsG0380014026.01;Name=MsG0380014026.01 |
| Chr3 | mRNA | 48680400 | 48680876 | 48680400 | ID=MsG0380014026.01.T01;Parent=MsG0380014026.01;Name=MsG0380014026.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|158 |
| Chr3 | exon | 48680400 | 48680876 | 48680400 | ID=MsG0380014026.01.T01:exon:8541;Parent=MsG0380014026.01.T01 |
| Chr3 | CDS | 48680400 | 48680876 | 48680400 | ID=MsG0380014026.01.T01:cds;Parent=MsG0380014026.01.T01 |
| Gene Sequence |
| Protein sequence |
