AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010142.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010142.01.T01 MTR_4g051290 90.085 353 1 1 1 319 1 353 0.0 626
MsG0280010142.01.T01 MTR_7g021750 89.802 353 2 1 1 319 1 353 0.0 624
MsG0280010142.01.T01 MTR_0002s0380 88.669 353 6 1 1 319 1 353 0.0 619
MsG0280010142.01.T01 MTR_7g017540 59.011 283 43 5 37 313 1 216 1.54e-95 282
MsG0280010142.01.T01 MTR_3g088450 98.020 101 2 0 219 319 14 114 3.74e-66 203
MsG0280010142.01.T01 MTR_4g050770 91.837 98 8 0 1 98 1 98 9.22e-57 180
MsG0280010142.01.T01 MTR_2g089580 90.816 98 9 0 1 98 1 98 1.28e-55 177
MsG0280010142.01.T01 MTR_1g057280 80.000 95 19 0 4 98 1 95 1.61e-47 157
MsG0280010142.01.T01 MTR_4g006190 72.566 113 22 4 37 148 1 105 1.82e-40 137
MsG0280010142.01.T01 MTR_0002s0420 38.674 181 108 3 88 268 122 299 5.18e-34 132
MsG0280010142.01.T01 MTR_4g073360 37.143 175 107 3 92 266 108 279 8.04e-32 120
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010142.01.T01 ATCG00020 89.518 353 3 1 1 319 1 353 0.0 623
MsG0280010142.01.T01 ATCG00270 39.779 181 106 3 88 268 122 299 1.45e-36 134

Find 87 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTTATGATTGTATTTC+AGG 0.094964 2:-65296494 MsG0280010142.01.T01:CDS
TACGGAAACAATATTATTTC+TGG 0.148897 2:-65296816 MsG0280010142.01.T01:CDS
GGTATTCGTGAGCCTGTTTC+TGG 0.153797 2:-65296849 MsG0280010142.01.T01:CDS
ACTATGGCTTTCAACTTAAA+TGG 0.204485 2:-65296160 MsG0280010142.01.T01:CDS
GTAGCGGCTCATGGTTATTT+TGG 0.211941 2:-65296289 MsG0280010142.01.T01:CDS
ATGAGCCGCTACAATATTAT+AGG 0.272473 2:+65296300 None:intergenic
CTTGGCCTGTAGTAGGTATC+TGG 0.286287 2:-65296204 MsG0280010142.01.T01:CDS
AACCGTGCATAGCACTAAAT+AGG 0.289873 2:+65296407 None:intergenic
GTTTCTGGATCTCTACTTTA+CGG 0.304376 2:-65296834 MsG0280010142.01.T01:CDS
TATGGGGTCGCTTCTGTAAC+TGG 0.325492 2:-65296995 MsG0280010142.01.T01:CDS
GTCGAGGCTCCATCTATAAA+TGG 0.328108 2:-65295998 MsG0280010142.01.T01:CDS
ATGCATCCATTTCACATGTT+AGG 0.334267 2:-65296454 MsG0280010142.01.T01:CDS
GAAAAGCTTCCTTGACCAAT+TGG 0.357543 2:+65296550 None:intergenic
AATTGTTGAAACTAGCATAT+TGG 0.372196 2:+65296254 None:intergenic
CGTCTTTACATTGGATGGTT+TGG 0.372317 2:-65296954 MsG0280010142.01.T01:CDS
TGGTAACTTCTAGTTTGATC+AGG 0.373357 2:-65296381 MsG0280010142.01.T01:CDS
TACAGAAGTTGCGGTCAATA+AGG 0.375984 2:+65296914 None:intergenic
CGCATTAGGTATCAGCACTA+TGG 0.383333 2:-65296176 MsG0280010142.01.T01:CDS
GGTATCTGGTTTACCGCATT+AGG 0.389981 2:-65296190 MsG0280010142.01.T01:CDS
TACATTTCTTCCTAGCTGCT+TGG 0.392937 2:-65296222 MsG0280010142.01.T01:CDS
AAATATTATCCATTTATAGA+TGG 0.399782 2:+65295989 None:intergenic
GACGCGATAGCGAAAACCTA+TGG 0.411483 2:-65297013 MsG0280010142.01.T01:CDS
TTAGGTGTAGCTGGTGTATT+CGG 0.411606 2:-65296436 MsG0280010142.01.T01:CDS
TTCGTCTGGGTATGCGCCCT+TGG 0.418396 2:-65296630 MsG0280010142.01.T01:CDS
CTTGACTATCAACTACTGAT+TGG 0.426567 2:+65296125 None:intergenic
ACTTGGTGTAGCTTGTTACA+TGG 0.436838 2:-65296674 MsG0280010142.01.T01:intron
CTAGCTGCTTGGCCTGTAGT+AGG 0.440325 2:-65296211 MsG0280010142.01.T01:CDS
TAAAGTAGAGATCCAGAAAC+AGG 0.442058 2:+65296837 None:intergenic
CGAATACCATCAATATCTAC+TGG 0.444826 2:+65296864 None:intergenic
ACTGCAGTAGCAGCTGCAAC+AGG 0.445711 2:+65296586 None:intergenic
GCTACACCTAACATGTGAAA+TGG 0.452322 2:+65296448 None:intergenic
AGCCGCAGAAGTAGGAATAA+TGG 0.453817 2:+65296791 None:intergenic
AAAAGCTTCCTTGACCAATT+GGG 0.461317 2:+65296551 None:intergenic
TTTCACATGTTAGGTGTAGC+TGG 0.469077 2:-65296445 MsG0280010142.01.T01:CDS
GGTATGCCTCTAGGAATCTC+TGG 0.470401 2:-65296523 MsG0280010142.01.T01:CDS
GCTAATGAAGGTTACAGATT+CGG 0.475758 2:-65296337 MsG0280010142.01.T01:CDS
GCCCCTCCAGTAGATATTGA+TGG 0.479743 2:-65296870 MsG0280010142.01.T01:CDS
ATTCCTACTTCTGCGGCTAT+CGG 0.479971 2:-65296786 MsG0280010142.01.T01:intron
ACGCGATAGCGAAAACCTAT+GGG 0.487730 2:-65297012 MsG0280010142.01.T01:CDS
TAGTGCTATGCACGGTTCCT+TGG 0.490089 2:-65296401 MsG0280010142.01.T01:CDS
GAAAATGAATCTGCTAATGA+AGG 0.504633 2:-65296349 MsG0280010142.01.T01:CDS
AAAACCGTCTTTACATTGGA+TGG 0.504784 2:-65296959 MsG0280010142.01.T01:CDS
TAACCGTGCTAACCTTGGTA+TGG 0.506629 2:-65296071 MsG0280010142.01.T01:CDS
TAGCATATTGGAAGATCAAT+CGG 0.506638 2:+65296266 None:intergenic
ACCGTGCATAGCACTAAATA+GGG 0.508247 2:+65296408 None:intergenic
TATAATATTGTAGCGGCTCA+TGG 0.516941 2:-65296298 MsG0280010142.01.T01:CDS
CTTGGTGTAGCTTGTTACAT+GGG 0.525076 2:-65296673 MsG0280010142.01.T01:intron
TCTAGACCTAGCTGCGGTCG+AGG 0.526199 2:-65296014 MsG0280010142.01.T01:CDS
ATTATTAACCGTGCTAACCT+TGG 0.526840 2:-65296076 MsG0280010142.01.T01:CDS
GAAGTTGCGGTCAATAAGGT+AGG 0.528902 2:+65296918 None:intergenic
GGTAACTTCTAGTTTGATCA+GGG 0.532589 2:-65296380 MsG0280010142.01.T01:CDS
TCCCTATTTAGTGCTATGCA+CGG 0.549758 2:-65296409 MsG0280010142.01.T01:CDS
TCTCTCTAAAATTGCAGTCA+TGG 0.558841 2:+65297034 None:intergenic
GAATATGCAACAGCAATCCA+AGG 0.563142 2:+65296613 None:intergenic
ACGGTTAATAATATCAGCCC+AGG 0.563451 2:+65296087 None:intergenic
GATAATAAATACAGAAGTTG+CGG 0.566120 2:+65296905 None:intergenic
TTGATCTACCCAATTGGTCA+AGG 0.568683 2:-65296559 MsG0280010142.01.T01:CDS
ATGGAGCCTCGACCGCAGCT+AGG 0.572338 2:+65296008 None:intergenic
TACCATCAATATCTACTGGA+GGG 0.577447 2:+65296868 None:intergenic
TTGTTACATGGGTCGTGAGT+GGG 0.579018 2:-65296662 MsG0280010142.01.T01:CDS
AAACCGATAGCCGCAGAAGT+AGG 0.579727 2:+65296783 None:intergenic
CTACTACAGGCCAAGCAGCT+AGG 0.580380 2:+65296212 None:intergenic
ACTGAAAACCGTCTTTACAT+TGG 0.581643 2:-65296963 MsG0280010142.01.T01:CDS
TGCCATTATTCCTACTTCTG+CGG 0.582467 2:-65296793 MsG0280010142.01.T01:CDS
CTTCCATACCAAGGTTAGCA+CGG 0.587709 2:+65296068 None:intergenic
CGACCGCAGCTAGGTCTAGA+GGG 0.588594 2:+65296017 None:intergenic
ACCATCAATATCTACTGGAG+GGG 0.588944 2:+65296869 None:intergenic
CTTGTTACATGGGTCGTGAG+TGG 0.590459 2:-65296663 MsG0280010142.01.T01:CDS
AAGGTCGTGTAATTAACACC+TGG 0.599282 2:-65296105 MsG0280010142.01.T01:CDS
TCGACCGCAGCTAGGTCTAG+AGG 0.608941 2:+65296016 None:intergenic
GTAAACCAGATACCTACTAC+AGG 0.609077 2:+65296199 None:intergenic
AAGTTGCGGTCAATAAGGTA+GGG 0.623830 2:+65296919 None:intergenic
AGGTTACAGATTCGGTCAAG+AGG 0.630458 2:-65296329 MsG0280010142.01.T01:CDS
AGTTACAGAAGCGACCCCAT+AGG 0.631772 2:+65296997 None:intergenic
AATATGCAACAGCAATCCAA+GGG 0.635044 2:+65296614 None:intergenic
GGTGTAGCTGGTGTATTCGG+CGG 0.636664 2:-65296433 MsG0280010142.01.T01:CDS
ATACCATCAATATCTACTGG+AGG 0.642954 2:+65296867 None:intergenic
CAAACCATCCAATGTAAAGA+CGG 0.643551 2:+65296955 None:intergenic
CGCGATAGCGAAAACCTATG+GGG 0.644401 2:-65297011 MsG0280010142.01.T01:CDS
CAATCAGTAGTTGATAGTCA+AGG 0.648342 2:-65296124 MsG0280010142.01.T01:CDS
AGGTCGTGTAATTAACACCT+GGG 0.648561 2:-65296104 MsG0280010142.01.T01:CDS
CATGCATAACTTCCATACCA+AGG 0.650999 2:+65296059 None:intergenic
GATCAAACTAGAAGTTACCA+AGG 0.656817 2:+65296384 None:intergenic
AGAAACCTATAATATTGTAG+CGG 0.673114 2:-65296305 MsG0280010142.01.T01:CDS
CATAGTGCTGATACCTAATG+CGG 0.691049 2:+65296177 None:intergenic
AAAGTACCAGAGATTCCTAG+AGG 0.716307 2:+65296517 None:intergenic
CTTCCCTCTAGACCTAGCTG+CGG 0.753269 2:-65296020 MsG0280010142.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AATTGTTGAAACTAGCATAT+TGG + Chr2:65296775-65296794 None:intergenic 25.0%
! AGAAACCTATAATATTGTAG+CGG - Chr2:65296721-65296740 MsG0280010142.01.T01:intron 25.0%
! CAACTTTATGATTGTATTTC+AGG - Chr2:65296532-65296551 MsG0280010142.01.T01:CDS 25.0%
! GATAATAAATACAGAAGTTG+CGG + Chr2:65296124-65296143 None:intergenic 25.0%
! TACGGAAACAATATTATTTC+TGG - Chr2:65296210-65296229 MsG0280010142.01.T01:CDS 25.0%
! TGTAGAACAATTAGTTCATA+AGG + Chr2:65296326-65296345 None:intergenic 25.0%
ACTATGGCTTTCAACTTAAA+TGG - Chr2:65296866-65296885 MsG0280010142.01.T01:CDS 30.0%
ATTGTTCTACACTTCTTACT+TGG - Chr2:65296335-65296354 MsG0280010142.01.T01:CDS 30.0%
GAAAATGAATCTGCTAATGA+AGG - Chr2:65296677-65296696 MsG0280010142.01.T01:intron 30.0%
GTTGTATAACCATTCATCAA+CGG + Chr2:65296298-65296317 None:intergenic 30.0%
TAGCATATTGGAAGATCAAT+CGG + Chr2:65296763-65296782 None:intergenic 30.0%
! ATTAGCAGATTCATTTTCTG+TGG + Chr2:65296675-65296694 None:intergenic 30.0%
! GTTGATGAATGGTTATACAA+CGG - Chr2:65296297-65296316 MsG0280010142.01.T01:CDS 30.0%
AAAACCGTCTTTACATTGGA+TGG - Chr2:65296067-65296086 MsG0280010142.01.T01:CDS 35.0%
AAAAGCTTCCTTGACCAATT+GGG + Chr2:65296478-65296497 None:intergenic 35.0%
AATATGCAACAGCAATCCAA+GGG + Chr2:65296415-65296434 None:intergenic 35.0%
ACTGAAAACCGTCTTTACAT+TGG - Chr2:65296063-65296082 MsG0280010142.01.T01:CDS 35.0%
ATACCATCAATATCTACTGG+AGG + Chr2:65296162-65296181 None:intergenic 35.0%
ATGAGCCGCTACAATATTAT+AGG + Chr2:65296729-65296748 None:intergenic 35.0%
ATGCATCCATTTCACATGTT+AGG - Chr2:65296572-65296591 MsG0280010142.01.T01:CDS 35.0%
ATTATTAACCGTGCTAACCT+TGG - Chr2:65296950-65296969 MsG0280010142.01.T01:CDS 35.0%
CAAACCATCCAATGTAAAGA+CGG + Chr2:65296074-65296093 None:intergenic 35.0%
CGAATACCATCAATATCTAC+TGG + Chr2:65296165-65296184 None:intergenic 35.0%
CTTGACTATCAACTACTGAT+TGG + Chr2:65296904-65296923 None:intergenic 35.0%
GATCAAACTAGAAGTTACCA+AGG + Chr2:65296645-65296664 None:intergenic 35.0%
GCTAATGAAGGTTACAGATT+CGG - Chr2:65296689-65296708 MsG0280010142.01.T01:intron 35.0%
TAAAGTAGAGATCCAGAAAC+AGG + Chr2:65296192-65296211 None:intergenic 35.0%
TACCATCAATATCTACTGGA+GGG + Chr2:65296161-65296180 None:intergenic 35.0%
TATAATATTGTAGCGGCTCA+TGG - Chr2:65296728-65296747 MsG0280010142.01.T01:intron 35.0%
! GTTTCTGGATCTCTACTTTA+CGG - Chr2:65296192-65296211 MsG0280010142.01.T01:CDS 35.0%
! GTTTTCTTGATCTACCCAAT+TGG - Chr2:65296461-65296480 MsG0280010142.01.T01:CDS 35.0%
! TTTGCACTTTTACCCGATAT+GGG - Chr2:65296263-65296282 MsG0280010142.01.T01:CDS 35.0%
!! CAATCAGTAGTTGATAGTCA+AGG - Chr2:65296902-65296921 MsG0280010142.01.T01:CDS 35.0%
!! GGTAACTTCTAGTTTGATCA+GGG - Chr2:65296646-65296665 MsG0280010142.01.T01:CDS 35.0%
!! TGGTAACTTCTAGTTTGATC+AGG - Chr2:65296645-65296664 MsG0280010142.01.T01:CDS 35.0%
AACCGTGCATAGCACTAAAT+AGG + Chr2:65296622-65296641 None:intergenic 40.0%
AAGGTCGTGTAATTAACACC+TGG - Chr2:65296921-65296940 MsG0280010142.01.T01:CDS 40.0%
AAGTTGCGGTCAATAAGGTA+GGG + Chr2:65296110-65296129 None:intergenic 40.0%
ACCATCAATATCTACTGGAG+GGG + Chr2:65296160-65296179 None:intergenic 40.0%
ACCGTGCATAGCACTAAATA+GGG + Chr2:65296621-65296640 None:intergenic 40.0%
ACGGTTAATAATATCAGCCC+AGG + Chr2:65296942-65296961 None:intergenic 40.0%
AGGTCGTGTAATTAACACCT+GGG - Chr2:65296922-65296941 MsG0280010142.01.T01:CDS 40.0%
CATGCATAACTTCCATACCA+AGG + Chr2:65296970-65296989 None:intergenic 40.0%
CGTCTTTACATTGGATGGTT+TGG - Chr2:65296072-65296091 MsG0280010142.01.T01:CDS 40.0%
GAAAAGCTTCCTTGACCAAT+TGG + Chr2:65296479-65296498 None:intergenic 40.0%
GAATATGCAACAGCAATCCA+AGG + Chr2:65296416-65296435 None:intergenic 40.0%
GCTACACCTAACATGTGAAA+TGG + Chr2:65296581-65296600 None:intergenic 40.0%
GTAAACCAGATACCTACTAC+AGG + Chr2:65296830-65296849 None:intergenic 40.0%
TACAGAAGTTGCGGTCAATA+AGG + Chr2:65296115-65296134 None:intergenic 40.0%
TACATTTCTTCCTAGCTGCT+TGG - Chr2:65296804-65296823 MsG0280010142.01.T01:CDS 40.0%
TCCCTATTTAGTGCTATGCA+CGG - Chr2:65296617-65296636 MsG0280010142.01.T01:CDS 40.0%
TGCCATTATTCCTACTTCTG+CGG - Chr2:65296233-65296252 MsG0280010142.01.T01:CDS 40.0%
TTAGGTGTAGCTGGTGTATT+CGG - Chr2:65296590-65296609 MsG0280010142.01.T01:CDS 40.0%
TTGATCTACCCAATTGGTCA+AGG - Chr2:65296467-65296486 MsG0280010142.01.T01:CDS 40.0%
TTTCACATGTTAGGTGTAGC+TGG - Chr2:65296581-65296600 MsG0280010142.01.T01:CDS 40.0%
! AAAGTACCAGAGATTCCTAG+AGG + Chr2:65296512-65296531 None:intergenic 40.0%
! GTTTGCACTTTTACCCGATA+TGG - Chr2:65296262-65296281 MsG0280010142.01.T01:CDS 40.0%
! TTTTCAGATGGTATGCCTCT+AGG - Chr2:65296494-65296513 MsG0280010142.01.T01:CDS 40.0%
!! ACTTGGTGTAGCTTGTTACA+TGG - Chr2:65296352-65296371 MsG0280010142.01.T01:CDS 40.0%
!! CATAGTGCTGATACCTAATG+CGG + Chr2:65296852-65296871 None:intergenic 40.0%
!! CTTGGTGTAGCTTGTTACAT+GGG - Chr2:65296353-65296372 MsG0280010142.01.T01:CDS 40.0%
!! TGGGAACTTAGTTTTCGTCT+GGG - Chr2:65296383-65296402 MsG0280010142.01.T01:CDS 40.0%
ACGCGATAGCGAAAACCTAT+GGG - Chr2:65296014-65296033 MsG0280010142.01.T01:CDS 45.0%
AGCCGCAGAAGTAGGAATAA+TGG + Chr2:65296238-65296257 None:intergenic 45.0%
ATTCCTACTTCTGCGGCTAT+CGG - Chr2:65296240-65296259 MsG0280010142.01.T01:CDS 45.0%
CGCATTAGGTATCAGCACTA+TGG - Chr2:65296850-65296869 MsG0280010142.01.T01:CDS 45.0%
CTTCCATACCAAGGTTAGCA+CGG + Chr2:65296961-65296980 None:intergenic 45.0%
GAAGTTGCGGTCAATAAGGT+AGG + Chr2:65296111-65296130 None:intergenic 45.0%
GTCGAGGCTCCATCTATAAA+TGG - Chr2:65297028-65297047 MsG0280010142.01.T01:CDS 45.0%
TAACCGTGCTAACCTTGGTA+TGG - Chr2:65296955-65296974 MsG0280010142.01.T01:CDS 45.0%
TTGTTACATGGGTCGTGAGT+GGG - Chr2:65296364-65296383 MsG0280010142.01.T01:CDS 45.0%
! AAGCTGCATCCGTTGATGAA+TGG - Chr2:65296286-65296305 MsG0280010142.01.T01:CDS 45.0%
! AGGTTACAGATTCGGTCAAG+AGG - Chr2:65296697-65296716 MsG0280010142.01.T01:intron 45.0%
! GGTATCTGGTTTACCGCATT+AGG - Chr2:65296836-65296855 MsG0280010142.01.T01:CDS 45.0%
! GGTCAAGGAAGCTTTTCAGA+TGG - Chr2:65296482-65296501 MsG0280010142.01.T01:CDS 45.0%
! GTAAAGACGGTTTTCAGTGC+TGG + Chr2:65296061-65296080 None:intergenic 45.0%
! GTAGCGGCTCATGGTTATTT+TGG - Chr2:65296737-65296756 MsG0280010142.01.T01:intron 45.0%
!! GTGGGAACTTAGTTTTCGTC+TGG - Chr2:65296382-65296401 MsG0280010142.01.T01:CDS 45.0%
AAACCGATAGCCGCAGAAGT+AGG + Chr2:65296246-65296265 None:intergenic 50.0%
ACGGATGCAGCTTCCCATAT+CGG + Chr2:65296279-65296298 None:intergenic 50.0%
AGTTACAGAAGCGACCCCAT+AGG + Chr2:65296032-65296051 None:intergenic 50.0%
CGCGATAGCGAAAACCTATG+GGG - Chr2:65296015-65296034 MsG0280010142.01.T01:CDS 50.0%
CTTGGCCTGTAGTAGGTATC+TGG - Chr2:65296822-65296841 MsG0280010142.01.T01:CDS 50.0%
CTTGTTACATGGGTCGTGAG+TGG - Chr2:65296363-65296382 MsG0280010142.01.T01:CDS 50.0%
GACGCGATAGCGAAAACCTA+TGG - Chr2:65296013-65296032 MsG0280010142.01.T01:CDS 50.0%
GCCCCTCCAGTAGATATTGA+TGG - Chr2:65296156-65296175 MsG0280010142.01.T01:CDS 50.0%
GGTATTCGTGAGCCTGTTTC+TGG - Chr2:65296177-65296196 MsG0280010142.01.T01:CDS 50.0%
TAGTGCTATGCACGGTTCCT+TGG - Chr2:65296625-65296644 MsG0280010142.01.T01:CDS 50.0%
TATGGGGTCGCTTCTGTAAC+TGG - Chr2:65296031-65296050 MsG0280010142.01.T01:CDS 50.0%
! GGTATGCCTCTAGGAATCTC+TGG - Chr2:65296503-65296522 MsG0280010142.01.T01:CDS 50.0%
ACTGCAGTAGCAGCTGCAAC+AGG + Chr2:65296443-65296462 None:intergenic 55.0%
CGGATGCAGCTTCCCATATC+GGG + Chr2:65296278-65296297 None:intergenic 55.0%
CTACTACAGGCCAAGCAGCT+AGG + Chr2:65296817-65296836 None:intergenic 55.0%
CTAGCTGCTTGGCCTGTAGT+AGG - Chr2:65296815-65296834 MsG0280010142.01.T01:CDS 55.0%
CTTCCCTCTAGACCTAGCTG+CGG - Chr2:65297006-65297025 MsG0280010142.01.T01:CDS 55.0%
GGTGTAGCTGGTGTATTCGG+CGG - Chr2:65296593-65296612 MsG0280010142.01.T01:CDS 55.0%
CGACCGCAGCTAGGTCTAGA+GGG + Chr2:65297012-65297031 None:intergenic 60.0%
TCGACCGCAGCTAGGTCTAG+AGG + Chr2:65297013-65297032 None:intergenic 60.0%
TCTAGACCTAGCTGCGGTCG+AGG - Chr2:65297012-65297031 MsG0280010142.01.T01:CDS 60.0%
TTCGTCTGGGTATGCGCCCT+TGG - Chr2:65296396-65296415 MsG0280010142.01.T01:CDS 60.0%
ATGGAGCCTCGACCGCAGCT+AGG + Chr2:65297021-65297040 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 65295994 65297054 65295994 ID=MsG0280010142.01;Name=MsG0280010142.01
Chr2 mRNA 65295994 65297054 65295994 ID=MsG0280010142.01.T01;Parent=MsG0280010142.01;Name=MsG0280010142.01.T01;_AED=0.45;_eAED=0.46;_QI=0|0|0|1|1|1|2|0|319
Chr2 exon 65296787 65297054 65296787 ID=MsG0280010142.01.T01:exon:18042;Parent=MsG0280010142.01.T01
Chr2 exon 65295994 65296685 65295994 ID=MsG0280010142.01.T01:exon:18041;Parent=MsG0280010142.01.T01
Chr2 CDS 65296787 65297054 65296787 ID=MsG0280010142.01.T01:cds;Parent=MsG0280010142.01.T01
Chr2 CDS 65295994 65296685 65295994 ID=MsG0280010142.01.T01:cds;Parent=MsG0280010142.01.T01
Gene Sequence

>MsG0280010142.01.T01

ATGACTGCAATTTTAGAGAGACGCGATAGCGAAAACCTATGGGGTCGCTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATCGCAGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCGGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCATTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTTAACCAATCAGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCGGTCGAGGCTCCATCTATAAATGGATAA

Protein sequence

>MsG0280010142.01.T01

MTAILERRDSENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING*