AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002439.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002439.01.T01 MTR_1g050505 97.452 785 20 0 107 891 1 785 0.0 1581
MsG0180002439.01.T01 MTR_1g087380 67.544 798 228 6 103 891 18 793 0.0 1096
MsG0180002439.01.T01 MTR_7g108785 47.407 810 387 9 110 891 5 803 0.0 750
MsG0180002439.01.T01 MTR_4g006040 72.131 61 17 0 1 61 75 135 1.05e-21 95.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002439.01.T01 AT3G56640 68.939 792 238 3 106 891 1 790 0.0 1132
MsG0180002439.01.T01 AT4G02350 45.583 781 383 6 127 891 33 787 0.0 696
MsG0180002439.01.T01 AT4G02350 45.583 781 383 6 127 891 33 787 0.0 696

Find 223 sgRNAs with CRISPR-Local

Find 583 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAAATTCATTCAAATTTA+AGG 0.117638 1:-38403757 None:intergenic
ACCTTTGTATCTTGCTATTA+TGG 0.143857 1:+38399622 MsG0180002439.01.T01:CDS
TCAAATTGCTGGTTTCTTTA+TGG 0.144792 1:+38402237 MsG0180002439.01.T01:CDS
GATTCTCCAGATGGGATATT+TGG 0.196077 1:+38403534 MsG0180002439.01.T01:CDS
TTGTTCGGACTTGTTTAATT+AGG 0.200970 1:+38403734 MsG0180002439.01.T01:three_prime_UTR
TTATGACTGCCGGTGTTAAT+TGG 0.231440 1:+38403067 MsG0180002439.01.T01:CDS
GCTGAGGAACAATATATTTC+AGG 0.255826 1:+38401989 MsG0180002439.01.T01:CDS
AGGATTATGTCACTCTGTTT+GGG 0.257881 1:+38402407 MsG0180002439.01.T01:CDS
CACTATGGTATTCCTGTTAC+TGG 0.258361 1:+38399693 MsG0180002439.01.T01:CDS
TCCGCAACACTTCTTCTCTT+TGG 0.275227 1:-38401296 None:intergenic
AAGGATTATGTCACTCTGTT+TGG 0.278171 1:+38402406 MsG0180002439.01.T01:CDS
ACTTCATGAATCCTGGTATA+AGG 0.279524 1:+38403451 MsG0180002439.01.T01:CDS
TAACACCTCAACACACTTCT+TGG 0.279936 1:-38401669 None:intergenic
TGATGTTGTGAGGAAGTATT+TGG 0.301076 1:+38402768 MsG0180002439.01.T01:CDS
GGGGCTACTCTTAGACAATA+TGG 0.302702 1:+38402427 MsG0180002439.01.T01:CDS
GCGGTTAAGGTAACGACTTC+GGG 0.321297 1:-38396778 None:intergenic
AGGAGTTCTGCTAGAAATAT+CGG 0.331928 1:+38401896 MsG0180002439.01.T01:CDS
AAATATTCTTTCATTTGAAT+AGG 0.332375 1:+38403644 MsG0180002439.01.T01:three_prime_UTR
AATTCCCCTCCTTGCGGTTA+AGG 0.334548 1:-38396791 None:intergenic
ACACACCGCCCGTCACACTA+TGG 0.337988 1:+38396743 MsG0180002439.01.T01:CDS
CCATTCTGATTTGTCTCCTC+AGG 0.338976 1:-38403093 None:intergenic
ATGATGTTGGTCCTCTTGTT+AGG 0.341685 1:+38401360 MsG0180002439.01.T01:CDS
CTTTGTTTACCATGTTCAAT+AGG 0.343213 1:-38403032 None:intergenic
AATATTCTTTCATTTGAATA+GGG 0.344834 1:+38403645 MsG0180002439.01.T01:three_prime_UTR
GTATTACTCAATACAATTAA+TGG 0.346233 1:+38402820 MsG0180002439.01.T01:CDS
CAACTCTGTGCATGGCATCC+AGG 0.348870 1:-38403185 None:intergenic
ATCACCTTTGCACTTAAATC+TGG 0.355159 1:-38402976 None:intergenic
CTGCATTCAATACGTCAATA+AGG 0.371814 1:-38402798 None:intergenic
TGTTAGGCATGCCTTTGAAA+TGG 0.373690 1:+38401376 MsG0180002439.01.T01:CDS
ACGAATGGATGGTTCAAATA+AGG 0.376588 1:+38401876 MsG0180002439.01.T01:CDS
ACAGTTCTATTCTGCTGGTC+TGG 0.377334 1:+38403341 MsG0180002439.01.T01:CDS
ATCAACAGAGCCTTTGATAA+AGG 0.378042 1:-38402707 None:intergenic
CTGGGCTATTCCATCATCGC+TGG 0.381288 1:+38399712 MsG0180002439.01.T01:CDS
GATTACTTATCTCATGGTAT+TGG 0.382071 1:+38402727 MsG0180002439.01.T01:CDS
TGCCATCTGTGATAAATTCA+AGG 0.387690 1:+38403512 MsG0180002439.01.T01:CDS
TAAAATGACATCTGTGTTAG+AGG 0.392956 1:+38402339 MsG0180002439.01.T01:CDS
AGAGGAGCAGTTCTCCTCTA+TGG 0.398120 1:+38402357 MsG0180002439.01.T01:CDS
AGAAGAAGTGTTGCGGAGAA+TGG 0.398311 1:+38401302 MsG0180002439.01.T01:CDS
ATTAGTGTTTCTATATTGTT+CGG 0.401254 1:+38403719 MsG0180002439.01.T01:three_prime_UTR
CCTTAACCACAAAACTCATC+TGG 0.405198 1:-38401421 None:intergenic
GAACATCAACAGTTTGTTGC+CGG 0.408299 1:-38402525 None:intergenic
GAGGATTTGTCCCTTGCAAA+TGG 0.411506 1:+38401335 MsG0180002439.01.T01:CDS
TGCTGGTTTCTTTATGGTTG+AGG 0.414308 1:+38402243 MsG0180002439.01.T01:CDS
TACGGCGATGAATTCGTTCC+CGG 0.416367 1:+38396713 None:intergenic
GTTAGGCATGCCTTTGAAAT+GGG 0.417673 1:+38401377 MsG0180002439.01.T01:CDS
AGGGGTAAAATTTGTTGTGC+TGG 0.418877 1:-38403165 None:intergenic
CACATTGAGAAGAATGTTTG+CGG 0.419635 1:+38401845 MsG0180002439.01.T01:CDS
GAAAGCAGCCACTAGAGAAC+TGG 0.420473 1:-38403232 None:intergenic
TTCCCTCTCGAAAGCCACTA+TGG 0.423302 1:+38399678 MsG0180002439.01.T01:CDS
TGATGGAATAGCCCAGTAAC+AGG 0.425264 1:-38399705 None:intergenic
ATCTGGCGAAGAAGCCCCTC+TGG 0.428907 1:-38401404 None:intergenic
CTTCATGAATCCTGGTATAA+GGG 0.429853 1:+38403452 MsG0180002439.01.T01:CDS
AGAATCTTCGTCAAATTCTT+CGG 0.437081 1:-38402041 None:intergenic
AACTCTGTGCATGGCATCCA+GGG 0.439974 1:-38403184 None:intergenic
AGGAGGGGAATTCCGAAGGC+AGG 0.445047 1:+38396802 MsG0180002439.01.T01:CDS
GATAGAGTCCTCAGAACTGC+TGG 0.449546 1:+38402265 MsG0180002439.01.T01:CDS
GATATCAAACCCAGCGATGA+TGG 0.449574 1:-38399722 None:intergenic
CAACAAACTGTTGATGTTCT+CGG 0.449798 1:+38402529 MsG0180002439.01.T01:CDS
GTCTGGTAAGATTCAACAAA+AGG 0.453362 1:-38402205 None:intergenic
AATATCGGGCAAACAGCAAT+TGG 0.454039 1:+38401911 MsG0180002439.01.T01:CDS
CAGAACTGCTGGGGTCCTCC+TGG 0.454576 1:+38402276 MsG0180002439.01.T01:CDS
TCTAGGGATTCATGTGATCA+TGG 0.455365 1:+38401265 MsG0180002439.01.T01:intron
GCAAGGGATGCCACATAGTT+GGG 0.456841 1:-38402932 None:intergenic
GCTCTTCAAGCTTGACAAGA+AGG 0.458450 1:-38401595 None:intergenic
AGGCTTCCAAATATCCCATC+TGG 0.459405 1:-38403540 None:intergenic
GGAGAAAAGTTACTATGCAT+TGG 0.461116 1:+38403473 MsG0180002439.01.T01:CDS
GAGGAGAATGGTGCAACATA+TGG 0.463704 1:-38402652 None:intergenic
CAGTTCTATTCTGCTGGTCT+GGG 0.464232 1:+38403342 MsG0180002439.01.T01:CDS
ATCCTTGAATTTATCACAGA+TGG 0.464740 1:-38403514 None:intergenic
GGGCTACTCTTAGACAATAT+GGG 0.465026 1:+38402428 MsG0180002439.01.T01:CDS
GGCAAGGGATGCCACATAGT+TGG 0.468607 1:-38402933 None:intergenic
TGCGGTTAAGGTAACGACTT+CGG 0.469973 1:-38396779 None:intergenic
TGGATGCCATGCACAGAGTT+GGG 0.473385 1:+38403187 MsG0180002439.01.T01:CDS
GAACAATATATTTCAGGAGC+AGG 0.478659 1:+38401995 MsG0180002439.01.T01:CDS
CTTGCTGTCGATGAGCTTCG+TGG 0.479390 1:+38401497 MsG0180002439.01.T01:CDS
AAATTTGAATGAATTTCTCA+TGG 0.480494 1:+38403761 MsG0180002439.01.T01:three_prime_UTR
GGCATTCTTCCAACAGAAGC+TGG 0.481790 1:-38402504 None:intergenic
CGGGCGGTGTGTACAAGGCC+CGG 0.482578 1:-38396732 None:intergenic
CCGAAGGCAGGGCTAGTGAC+TGG 0.482833 1:+38396814 MsG0180002439.01.T01:CDS
TACAGGAATTCTTCTCTCTA+CGG 0.485568 1:-38401813 None:intergenic
TTTCAACTTGATCAGCTACC+AGG 0.486624 1:-38402294 None:intergenic
CCAGTCACTAGCCCTGCCTT+CGG 0.493075 1:-38396814 None:intergenic
GAGTTAAAGAGTCAACTTCA+TGG 0.494766 1:+38401539 MsG0180002439.01.T01:CDS
GTTGAGGTGTTAGAGCTTTG+CGG 0.497469 1:+38401680 MsG0180002439.01.T01:CDS
TCGGACGGAGGAAGGCTTGA+CGG 0.500914 1:-38399578 None:intergenic
CTGGATGCCATGCACAGAGT+TGG 0.503628 1:+38403186 MsG0180002439.01.T01:CDS
GCCCGTCACACTATGGGAGC+TGG 0.504327 1:+38396750 MsG0180002439.01.T01:CDS
GCCAGCTCCCATAGTGTGAC+GGG 0.506269 1:-38396751 None:intergenic
TTTGACGAACTGTTGCAATA+CGG 0.507034 1:-38401934 None:intergenic
CTTTGAAATGGGACGGCCAG+AGG 0.507915 1:+38401388 MsG0180002439.01.T01:CDS
TCTCTAGTGATAGTGTCAAA+AGG 0.510767 1:+38403253 MsG0180002439.01.T01:CDS
AGGATTTGTCCCTTGCAAAT+GGG 0.511180 1:+38401336 MsG0180002439.01.T01:CDS
GTCGGCCACACATCTTCTCC+TGG 0.511813 1:+38402381 MsG0180002439.01.T01:CDS
GTTGTGCTGAAGATATTTCA+AGG 0.513956 1:-38402183 None:intergenic
TGTGACGGGCGGTGTGTACA+AGG 0.514367 1:-38396737 None:intergenic
GCTGAGAACTTCATGAATCC+TGG 0.514543 1:+38403444 MsG0180002439.01.T01:CDS
AAAGGTGGTGGATGTGGTGG+TGG 0.516555 1:-38399605 None:intergenic
GGCCTTTCAATTGATCGGCA+AGG 0.518074 1:-38402949 None:intergenic
CTATGCATTGGATTACAAGA+AGG 0.518554 1:+38403485 MsG0180002439.01.T01:CDS
GATGAACAGTTCTATTCTGC+TGG 0.518652 1:+38403336 MsG0180002439.01.T01:CDS
GCCTTTCAATTGATCGGCAA+GGG 0.519139 1:-38402948 None:intergenic
CTGGGAGAAATTTACAATGA+AGG 0.520108 1:+38403360 MsG0180002439.01.T01:CDS
CGGTCAAGTTAACGAATGGA+TGG 0.520437 1:+38401865 MsG0180002439.01.T01:CDS
GGCCAGCTCCCATAGTGTGA+CGG 0.521476 1:-38396752 None:intergenic
GGTGCAACATATGGAAAAGC+AGG 0.523673 1:-38402643 None:intergenic
CTCTGGCCGTCCCATTTCAA+AGG 0.524280 1:-38401387 None:intergenic
TTGCGGAGAATGGTGATGGT+GGG 0.524383 1:+38401312 MsG0180002439.01.T01:CDS
TGGGCTATTCCATCATCGCT+GGG 0.525321 1:+38399713 MsG0180002439.01.T01:CDS
GCTGAGGCCTTTCAATTGAT+CGG 0.527520 1:-38402954 None:intergenic
TCTGTTGATTACTTATCTCA+TGG 0.527782 1:+38402721 MsG0180002439.01.T01:CDS
GGAGTTCTGCTAGAAATATC+GGG 0.528250 1:+38401897 MsG0180002439.01.T01:CDS
GCATATTTCCAGTTCTCTAG+TGG 0.529819 1:+38403224 MsG0180002439.01.T01:CDS
GAAGTACCACCAGCTTCTGT+TGG 0.532948 1:+38402495 MsG0180002439.01.T01:CDS
GGGCGGTGTGTACAAGGCCC+GGG 0.533426 1:-38396731 None:intergenic
TGCTGAAGATATTTCAAGGT+CGG 0.534645 1:-38402179 None:intergenic
CACACCGCCCGTCACACTAT+GGG 0.534716 1:+38396744 MsG0180002439.01.T01:CDS
AGCTTCTGTTGGAAGAATGC+CGG 0.536493 1:+38402506 MsG0180002439.01.T01:CDS
AAATTCAAGGATTCTCCAGA+TGG 0.538275 1:+38403525 MsG0180002439.01.T01:CDS
TTTGAAATGGGACGGCCAGA+GGG 0.541542 1:+38401389 MsG0180002439.01.T01:CDS
CAACATCATTCCCATTTGCA+AGG 0.541742 1:-38401346 None:intergenic
ATTTGAATAGGGTACAATTG+AGG 0.543345 1:+38403656 MsG0180002439.01.T01:three_prime_UTR
TGGATGTGGTGGTGGACGAT+CGG 0.543836 1:-38399597 None:intergenic
CCTTCACAGTATTCCTCTGA+AGG 0.547658 1:+38401778 MsG0180002439.01.T01:CDS
GAAGCTGGTGGTACTTCTCA+TGG 0.548105 1:-38402489 None:intergenic
TGTGGTGGTGGACGATCGGA+CGG 0.548537 1:-38399593 None:intergenic
TATTGCAACAGTTCGTCAAA+GGG 0.552393 1:+38401937 MsG0180002439.01.T01:CDS
GTTGCGGAGAATGGTGATGG+TGG 0.552497 1:+38401311 MsG0180002439.01.T01:CDS
CTCACAATGCGACACACATC+AGG 0.554021 1:-38402682 None:intergenic
GATGCTAGAACAGCAGAGAA+AGG 0.554326 1:+38401967 MsG0180002439.01.T01:CDS
TGCGGAGAATGGTGATGGTG+GGG 0.555273 1:+38401313 MsG0180002439.01.T01:CDS
TTTGCACTTAAATCTGGCTG+AGG 0.555275 1:-38402970 None:intergenic
AGATACAAAGGTGGTGGATG+TGG 0.556799 1:-38399611 None:intergenic
CGTTACCTTAACCGCAAGGA+GGG 0.557104 1:+38396786 MsG0180002439.01.T01:CDS
ATAGCAAGATACAAAGGTGG+TGG 0.557623 1:-38399617 None:intergenic
TACAAAGGTGGTGGATGTGG+TGG 0.557824 1:-38399608 None:intergenic
GTGGACGATCGGACGGAGGA+AGG 0.558076 1:-38399586 None:intergenic
ACCACTCCCAACTCTGTGCA+TGG 0.558654 1:-38403193 None:intergenic
CCTGAGGAGACAAATCAGAA+TGG 0.559457 1:+38403093 MsG0180002439.01.T01:CDS
AGGGAGTCTCGCCTACACTT+TGG 0.560258 1:+38402015 MsG0180002439.01.T01:CDS
ATAGAGTCCTCAGAACTGCT+GGG 0.560288 1:+38402266 MsG0180002439.01.T01:CDS
GGCATGCCTTTGAAATGGGA+CGG 0.560747 1:+38401381 MsG0180002439.01.T01:CDS
TCAGGTACCATGGAGGAGAA+TGG 0.560880 1:-38402664 None:intergenic
AAGTGCTAGAAAGAAATCAA+TGG 0.564131 1:+38403584 MsG0180002439.01.T01:CDS
GTATTGCAACAGTTCGTCAA+AGG 0.565832 1:+38401936 MsG0180002439.01.T01:CDS
CTTGGTAGAAGCAAGGCAGT+TGG 0.566725 1:+38403398 MsG0180002439.01.T01:CDS
ACGGCGATGAATTCGTTCCC+GGG 0.568514 1:+38396714 None:intergenic
TAAGGTAACGACTTCGGGCA+TGG 0.570077 1:-38396773 None:intergenic
TTTGCGGTCAAGTTAACGAA+TGG 0.570135 1:+38401861 MsG0180002439.01.T01:CDS
ATATGACAAGCACGATAAAG+AGG 0.572535 1:-38402085 None:intergenic
CTGATCAAGTTGAAACAATG+TGG 0.572599 1:+38402302 MsG0180002439.01.T01:CDS
AGACAATATGGGCATGACAT+TGG 0.572728 1:+38402439 MsG0180002439.01.T01:CDS
ATAGACAAGTTTATGACTGC+CGG 0.574025 1:+38403057 MsG0180002439.01.T01:CDS
GGAGAATGGTGATGGTGGGG+AGG 0.574140 1:+38401316 MsG0180002439.01.T01:CDS
ATAGTTGGGCTGCTTGTCGA+AGG 0.575484 1:-38402918 None:intergenic
AGAATTGCTTGGTAGAAGCA+AGG 0.577014 1:+38403391 MsG0180002439.01.T01:CDS
CTGGCTTTAAAATAGAATGA+AGG 0.578592 1:-38403146 None:intergenic
TCCCTTGCCGATCAATTGAA+AGG 0.579012 1:+38402947 MsG0180002439.01.T01:CDS
AGTATTCACGAAACTTCTCT+CGG 0.584288 1:-38402126 None:intergenic
ATTGTGAGATCCTTTATCAA+AGG 0.584314 1:+38402697 MsG0180002439.01.T01:CDS
CACACATCTTCTCCTGGTGA+AGG 0.584480 1:+38402387 MsG0180002439.01.T01:CDS
CGCAAGGAGGGGAATTCCGA+AGG 0.587255 1:+38396798 MsG0180002439.01.T01:CDS
AACAATATATTTCAGGAGCA+GGG 0.589178 1:+38401996 MsG0180002439.01.T01:CDS
CTTGCAAATGGGAATGATGT+TGG 0.589681 1:+38401347 MsG0180002439.01.T01:CDS
TGAATAGGGTACAATTGAGG+TGG 0.590973 1:+38403659 MsG0180002439.01.T01:three_prime_UTR
TGTTGCACCATTCTCCTCCA+TGG 0.591225 1:+38402657 MsG0180002439.01.T01:CDS
GGAGGGGAATTCCGAAGGCA+GGG 0.595288 1:+38396803 MsG0180002439.01.T01:CDS
CGACAAGCAGCCCAACTATG+TGG 0.597104 1:+38402922 MsG0180002439.01.T01:CDS
TGTAACAGTCAAGTTTCTGA+AGG 0.602302 1:+38401707 MsG0180002439.01.T01:CDS
CTTCGGAATTCCCCTCCTTG+CGG 0.602726 1:-38396797 None:intergenic
AACATCATTCCCATTTGCAA+GGG 0.603548 1:-38401345 None:intergenic
CGGTGTTAATTGGACTCCTG+AGG 0.606073 1:+38403077 MsG0180002439.01.T01:CDS
ACTATGGTATTCCTGTTACT+GGG 0.608522 1:+38399694 MsG0180002439.01.T01:CDS
AGAACAGCAGAGAAAGGCTG+AGG 0.608792 1:+38401973 MsG0180002439.01.T01:CDS
CACGAAGCTCATCGACAGCA+AGG 0.608904 1:-38401496 None:intergenic
ATGTGTGGCCGACTCCATAG+AGG 0.611530 1:-38402371 None:intergenic
GGAAAAGGAAGCTGAAATCG+AGG 0.612019 1:+38401442 MsG0180002439.01.T01:CDS
TGATCAAGTTGAAACAATGT+GGG 0.617908 1:+38402303 MsG0180002439.01.T01:CDS
TCCTCTGAAGGCTCTCAAAG+TGG 0.620998 1:+38401790 MsG0180002439.01.T01:CDS
TACCATAGTGGCTTTCGAGA+GGG 0.624725 1:-38399680 None:intergenic
AGCTCCCATAGTGTGACGGG+CGG 0.624802 1:-38396748 None:intergenic
TCCATAATAGCAAGATACAA+AGG 0.624851 1:-38399623 None:intergenic
AATTCAAGGATTCTCCAGAT+GGG 0.625722 1:+38403526 MsG0180002439.01.T01:CDS
CAGTAACAGGAATACCATAG+TGG 0.626322 1:-38399692 None:intergenic
ACCAAAGAGAAGAAGTGTTG+CGG 0.628477 1:+38401295 MsG0180002439.01.T01:CDS
TCAGCCAGATTTAAGTGCAA+AGG 0.629183 1:+38402972 MsG0180002439.01.T01:CDS
GGATTATGTCACTCTGTTTG+GGG 0.632995 1:+38402408 MsG0180002439.01.T01:CDS
TTGAAATGGGACGGCCAGAG+GGG 0.633318 1:+38401390 MsG0180002439.01.T01:CDS
TTACAGTGGCCTATTGAACA+TGG 0.634704 1:+38403023 MsG0180002439.01.T01:CDS
GGAGGACCCCAGCAGTTCTG+AGG 0.635860 1:-38402273 None:intergenic
TTATTCCGCATTGAAAACTG+TGG 0.636673 1:+38401736 MsG0180002439.01.T01:CDS
AGTGTTGCGGAGAATGGTGA+TGG 0.639304 1:+38401308 MsG0180002439.01.T01:CDS
GCGACACACATCAGGTACCA+TGG 0.639961 1:-38402674 None:intergenic
GCAGTTCTCCTCTATGGAGT+CGG 0.640898 1:+38402363 MsG0180002439.01.T01:CDS
CTCAGGAGTCCAATTAACAC+CGG 0.645970 1:-38403076 None:intergenic
TCAAAGGCATGCCTAACAAG+AGG 0.647185 1:-38401371 None:intergenic
ATACCATAGTGGCTTTCGAG+AGG 0.648271 1:-38399681 None:intergenic
TTCTTCGGCATCCAAAGTGT+AGG 0.648504 1:-38402026 None:intergenic
GTTACCTTAACCGCAAGGAG+GGG 0.648635 1:+38396787 MsG0180002439.01.T01:CDS
GCCACTTTGAGAGCCTTCAG+AGG 0.648980 1:-38401791 None:intergenic
GCCATGCACAGAGTTGGGAG+TGG 0.650464 1:+38403192 MsG0180002439.01.T01:CDS
CCTTCAGAGGAATACTGTGA+AGG 0.651136 1:-38401778 None:intergenic
TTACTCAATACAATTAATGG+TGG 0.652301 1:+38402823 MsG0180002439.01.T01:CDS
GGTGATCTTGAAAACGTCGA+GGG 0.652921 1:+38402993 MsG0180002439.01.T01:CDS
GAGTGACATAATCCTTCACC+AGG 0.654242 1:-38402399 None:intergenic
TCGAGGGACGCAGCTTACAG+TGG 0.655470 1:+38403009 MsG0180002439.01.T01:CDS
AAGTCGTTACCTTAACCGCA+AGG 0.659717 1:+38396782 MsG0180002439.01.T01:CDS
TAGAGTCCTCAGAACTGCTG+GGG 0.662834 1:+38402267 MsG0180002439.01.T01:CDS
CTTCACCAGGAGAAGATGTG+TGG 0.674846 1:-38402386 None:intergenic
TGAATGTCTTTGATGTTGTG+AGG 0.677996 1:+38402758 MsG0180002439.01.T01:CDS
AGGTGATCTTGAAAACGTCG+AGG 0.679596 1:+38402992 MsG0180002439.01.T01:CDS
ACTCTGTGCATGGCATCCAG+GGG 0.684981 1:-38403183 None:intergenic
TCGTTACCTTAACCGCAAGG+AGG 0.685415 1:+38396785 MsG0180002439.01.T01:CDS
ACTGGAGTGAAGTCAAAACA+AGG 0.687185 1:+38396832 MsG0180002439.01.T01:CDS
ATAATAGCAAGATACAAAGG+TGG 0.689966 1:-38399620 None:intergenic
GGTGGTGGACGATCGGACGG+AGG 0.692189 1:-38399590 None:intergenic
GACGGAGGAAGGCTTGACGG+AGG 0.702834 1:-38399575 None:intergenic
TTATTCTGTTAAGAAGAATG+TGG 0.707411 1:+38401628 MsG0180002439.01.T01:CDS
ATTCTTCCAACAGAAGCTGG+TGG 0.710384 1:-38402501 None:intergenic
AACAATGTGGGAGACAGCTG+TGG 0.714292 1:+38402315 MsG0180002439.01.T01:CDS
CAACTTGATCAGCTACCAGG+AGG 0.723111 1:-38402291 None:intergenic
GATGTGCAAGACTCATTACG+AGG 0.737166 1:+38401466 MsG0180002439.01.T01:CDS
AATGTCCAAGAAGTGTGTTG+AGG 0.745587 1:+38401664 MsG0180002439.01.T01:CDS
ACACACATCAGGTACCATGG+AGG 0.775847 1:-38402671 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTAAAAAAAATAATTA+TGG + Chr1:38398428-38398447 MsG0180002439.01.T01:intron 0.0%
!! AAAAAAATAATTATGGATAA+TGG + Chr1:38398435-38398454 MsG0180002439.01.T01:intron 10.0%
!! TATATATATATATATGAAAG+AGG - Chr1:38397638-38397657 None:intergenic 10.0%
!!! ATTATTTGTTTTTTAATGTT+TGG + Chr1:38398703-38398722 MsG0180002439.01.T01:intron 10.0%
!!! TCTATTTGTTTTTTAAAAAA+TGG + Chr1:38398575-38398594 MsG0180002439.01.T01:intron 10.0%
!! AAATATTCTTTCATTTGAAT+AGG + Chr1:38403644-38403663 MsG0180002439.01.T01:three_prime_UTR 15.0%
!! AATATTCTTTCATTTGAATA+GGG + Chr1:38403645-38403664 MsG0180002439.01.T01:three_prime_UTR 15.0%
!! ATTAATAGTGTTTATAAAAG+TGG - Chr1:38397783-38397802 None:intergenic 15.0%
!! TTAATAGTGTTTATAAAAGT+GGG - Chr1:38397782-38397801 None:intergenic 15.0%
!! TTTGATATCTAATAAATTTG+TGG + Chr1:38399736-38399755 MsG0180002439.01.T01:intron 15.0%
!!! AAGATTATGAATTTTTAAAG+AGG - Chr1:38398376-38398395 None:intergenic 15.0%
!!! ATAATTTGTTAAAACAATTG+CGG + Chr1:38398501-38398520 MsG0180002439.01.T01:intron 15.0%
!!! ATATTTATTTTTGTAGTTGA+AGG + Chr1:38400520-38400539 MsG0180002439.01.T01:intron 15.0%
!!! TTCCTTGTTTAAAATAAAAA+TGG + Chr1:38397001-38397020 MsG0180002439.01.T01:intron 15.0%
!!! TTGTTTATTTTTGTTGAATT+TGG + Chr1:38401240-38401259 MsG0180002439.01.T01:intron 15.0%
!!! TTTTATTTAGTTATAGAACA+TGG - Chr1:38397962-38397981 None:intergenic 15.0%
!! AAACTAATGAGTCATTATTA+AGG + Chr1:38399207-38399226 MsG0180002439.01.T01:intron 20.0%
!! AAATTGCATATTGGTAAAAT+AGG + Chr1:38400494-38400513 MsG0180002439.01.T01:intron 20.0%
!! AAATTTGAATGAATTTCTCA+TGG + Chr1:38403761-38403780 MsG0180002439.01.T01:three_prime_UTR 20.0%
!! AATCAAAATGATCATGAATT+GGG - Chr1:38400235-38400254 None:intergenic 20.0%
!! AATTGCATATTGGTAAAATA+GGG + Chr1:38400495-38400514 MsG0180002439.01.T01:intron 20.0%
!! ACATTATAATTACACAACAA+TGG + Chr1:38401045-38401064 MsG0180002439.01.T01:intron 20.0%
!! AGACTTAAATGAAATTACTA+AGG - Chr1:38401003-38401022 None:intergenic 20.0%
!! GAGAAATTCATTCAAATTTA+AGG - Chr1:38403760-38403779 None:intergenic 20.0%
!! GTATTACTCAATACAATTAA+TGG + Chr1:38402820-38402839 MsG0180002439.01.T01:CDS 20.0%
!! TAATAGTGTTTATAAAAGTG+GGG - Chr1:38397781-38397800 None:intergenic 20.0%
!! TGGCTTAAAAACAAATATTA+TGG + Chr1:38398595-38398614 MsG0180002439.01.T01:intron 20.0%
!!! ATTAGTGTTTCTATATTGTT+CGG + Chr1:38403719-38403738 MsG0180002439.01.T01:three_prime_UTR 20.0%
!!! ATTTTACCAATATGCAATTT+TGG - Chr1:38400494-38400513 None:intergenic 20.0%
!!! CAACAATTTTAGATTGTTAA+TGG - Chr1:38396973-38396992 None:intergenic 20.0%
!!! CACCATTTTTATTTTAAACA+AGG - Chr1:38397006-38397025 None:intergenic 20.0%
!!! CATACATTAGAAGTTAATTT+TGG + Chr1:38398041-38398060 MsG0180002439.01.T01:intron 20.0%
!!! CATTAACAATCTAAAATTGT+TGG + Chr1:38396971-38396990 MsG0180002439.01.T01:intron 20.0%
!!! GAAAGTACAAAATCTTATAT+AGG + Chr1:38399136-38399155 MsG0180002439.01.T01:intron 20.0%
!!! TAATTTTAGTCTCTTATATG+TGG + Chr1:38398959-38398978 MsG0180002439.01.T01:intron 20.0%
!!! TTCTATTTTCTATTTTCTGA+TGG + Chr1:38401160-38401179 MsG0180002439.01.T01:intron 20.0%
!!! TTGTTTTTTAATGTTTGGAT+GGG + Chr1:38398708-38398727 MsG0180002439.01.T01:intron 20.0%
!!! TTTGGTTTGTTATTGTTTTA+AGG + Chr1:38400123-38400142 MsG0180002439.01.T01:intron 20.0%
!!! TTTGTTTTTTAATGTTTGGA+TGG + Chr1:38398707-38398726 MsG0180002439.01.T01:intron 20.0%
!!! TTTTAAACAAAAAATGCCAA+TGG - Chr1:38398995-38399014 None:intergenic 20.0%
! AAATACAAATCGTAACAACT+AGG - Chr1:38400105-38400124 None:intergenic 25.0%
! AAATATTATGGAACTATCCA+TGG + Chr1:38398607-38398626 MsG0180002439.01.T01:intron 25.0%
! AAATCACTATAGTTGTATGT+TGG + Chr1:38401198-38401217 MsG0180002439.01.T01:intron 25.0%
! AAGGTAAACAAGCAATTAAT+GGG + Chr1:38401068-38401087 MsG0180002439.01.T01:intron 25.0%
! AAGTACTATATGTACTCTTA+GGG + Chr1:38400154-38400173 MsG0180002439.01.T01:intron 25.0%
! AATTGTAGGATGAATAGAAT+GGG + Chr1:38398786-38398805 MsG0180002439.01.T01:intron 25.0%
! ACTCATAAGATTATTATCCT+AGG + Chr1:38397045-38397064 MsG0180002439.01.T01:intron 25.0%
! AGAAAACCAAAATTGCATAT+TGG + Chr1:38400485-38400504 MsG0180002439.01.T01:intron 25.0%
! ATAGAGAAGTTAATCGTAAA+TGG - Chr1:38400933-38400952 None:intergenic 25.0%
! ATATATCCCTTATCAGTATA+TGG + Chr1:38397512-38397531 MsG0180002439.01.T01:intron 25.0%
! ATCATACTACATTTATGAAG+TGG - Chr1:38400331-38400350 None:intergenic 25.0%
! ATTCATAATCTTGTGCATAA+TGG + Chr1:38398384-38398403 MsG0180002439.01.T01:intron 25.0%
! CAATCAAAATGATCATGAAT+TGG - Chr1:38400236-38400255 None:intergenic 25.0%
! CATTCATTCATTCATTCATT+CGG + Chr1:38400735-38400754 MsG0180002439.01.T01:intron 25.0%
! CCTCAATAGAAAAAGAAAAA+CGG + Chr1:38397568-38397587 MsG0180002439.01.T01:intron 25.0%
! TAATATAGTACCTGTGAAAT+TGG - Chr1:38399865-38399884 None:intergenic 25.0%
! TACAAACTTGAACTCAAATA+AGG - Chr1:38399810-38399829 None:intergenic 25.0%
! TATAATTACACAACAATGGA+AGG + Chr1:38401049-38401068 MsG0180002439.01.T01:intron 25.0%
! TATTACAAGTAAGAGACTTA+TGG + Chr1:38399880-38399899 MsG0180002439.01.T01:intron 25.0%
! TCAAAGAAAGAAAAGAAGAA+TGG + Chr1:38398100-38398119 MsG0180002439.01.T01:intron 25.0%
! TGAATGAATGAATGAATGAA+TGG - Chr1:38400737-38400756 None:intergenic 25.0%
! TTACTCAATACAATTAATGG+TGG + Chr1:38402823-38402842 MsG0180002439.01.T01:CDS 25.0%
! TTATTCTGTTAAGAAGAATG+TGG + Chr1:38401628-38401647 MsG0180002439.01.T01:CDS 25.0%
!! AAAGTACTATATGTACTCTT+AGG + Chr1:38400153-38400172 MsG0180002439.01.T01:intron 25.0%
!! AATACTCACTCTGATTTTTA+AGG + Chr1:38398855-38398874 MsG0180002439.01.T01:intron 25.0%
!! ACAACTGTAACAAATTTTCA+CGG + Chr1:38398463-38398482 MsG0180002439.01.T01:intron 25.0%
!! ACATTAGAAGTTAATTTTGG+TGG + Chr1:38398044-38398063 MsG0180002439.01.T01:intron 25.0%
!! AGTTGTTACGATTTGTATTT+TGG + Chr1:38400105-38400124 MsG0180002439.01.T01:intron 25.0%
!! TCAATGTGCAATTTTATTAC+AGG - Chr1:38401833-38401852 None:intergenic 25.0%
!! TGTCATATTCATGATTTTCT+AGG + Chr1:38402100-38402119 MsG0180002439.01.T01:CDS 25.0%
!! TTTGTTGAATTTGGTTTCTA+GGG + Chr1:38401249-38401268 MsG0180002439.01.T01:intron 25.0%
!! TTTTCTATTTTCTGATGGAA+AGG + Chr1:38401165-38401184 MsG0180002439.01.T01:intron 25.0%
!!! ACTCATTAGTTTTAGAAGAT+TGG - Chr1:38399199-38399218 None:intergenic 25.0%
!!! GCACACGTATTTATTTTTTT+GGG + Chr1:38398643-38398662 MsG0180002439.01.T01:intron 25.0%
!!! TAAATTTGTGGCTGTTTTTT+TGG + Chr1:38399748-38399767 MsG0180002439.01.T01:intron 25.0%
!!! TGCACACGTATTTATTTTTT+TGG + Chr1:38398642-38398661 MsG0180002439.01.T01:intron 25.0%
!!! TTATTTTAACCTACATGTGT+TGG - Chr1:38397912-38397931 None:intergenic 25.0%
!!! TTATTTTTGTAGTTGAAGGA+AGG + Chr1:38400524-38400543 MsG0180002439.01.T01:intron 25.0%
!!! TTTTGTTGAATTTGGTTTCT+AGG + Chr1:38401248-38401267 MsG0180002439.01.T01:intron 25.0%
AAATAATCACAGAAGAGAGA+GGG - Chr1:38400796-38400815 None:intergenic 30.0%
AACAACTAGGCTAAAATCTT+CGG - Chr1:38400092-38400111 None:intergenic 30.0%
AACAATATATTTCAGGAGCA+GGG + Chr1:38401996-38402015 MsG0180002439.01.T01:CDS 30.0%
AACAGAATCAAATAGACCAT+TGG + Chr1:38397980-38397999 MsG0180002439.01.T01:intron 30.0%
AAGAAAGAAAAGAAGAATGG+TGG + Chr1:38398103-38398122 MsG0180002439.01.T01:intron 30.0%
AAGTGCTAGAAAGAAATCAA+TGG + Chr1:38403584-38403603 MsG0180002439.01.T01:CDS 30.0%
AATGCTAAAATTATTGTGCC+AGG + Chr1:38399035-38399054 MsG0180002439.01.T01:intron 30.0%
ACAACTCTAACAAATTTCCA+CGG + Chr1:38398536-38398555 MsG0180002439.01.T01:intron 30.0%
AGAATCTTCGTCAAATTCTT+CGG - Chr1:38402044-38402063 None:intergenic 30.0%
AGTACTATATGTACTCTTAG+GGG + Chr1:38400155-38400174 MsG0180002439.01.T01:intron 30.0%
ATAATAGCAAGATACAAAGG+TGG - Chr1:38399623-38399642 None:intergenic 30.0%
ATAGAAAGTTGGATCTACAT+TGG - Chr1:38397430-38397449 None:intergenic 30.0%
ATCCTTGAATTTATCACAGA+TGG - Chr1:38403517-38403536 None:intergenic 30.0%
ATGCTAAAATTATTGTGCCA+GGG + Chr1:38399036-38399055 MsG0180002439.01.T01:intron 30.0%
ATTGTGAGATCCTTTATCAA+AGG + Chr1:38402697-38402716 MsG0180002439.01.T01:CDS 30.0%
ATTTGAATAGGGTACAATTG+AGG + Chr1:38403656-38403675 MsG0180002439.01.T01:three_prime_UTR 30.0%
ATTTGGGGATTACAACAATT+TGG - Chr1:38399388-38399407 None:intergenic 30.0%
CAATTTGAGCAAAAAATGTC+TGG - Chr1:38402225-38402244 None:intergenic 30.0%
GAAGGTAAACAAGCAATTAA+TGG + Chr1:38401067-38401086 MsG0180002439.01.T01:intron 30.0%
GAATTGTAGGATGAATAGAA+TGG + Chr1:38398785-38398804 MsG0180002439.01.T01:intron 30.0%
GACCCATTTCTTAATACATA+CGG - Chr1:38398922-38398941 None:intergenic 30.0%
GACCGTATGTATTAAGAAAT+GGG + Chr1:38398917-38398936 MsG0180002439.01.T01:intron 30.0%
GATTACTTATCTCATGGTAT+TGG + Chr1:38402727-38402746 MsG0180002439.01.T01:CDS 30.0%
GATTGTTAGGATAATGAGTT+CGG - Chr1:38399915-38399934 None:intergenic 30.0%
GTGAGTATTTCCTTATCATT+TGG - Chr1:38398844-38398863 None:intergenic 30.0%
TAAAATGACATCTGTGTTAG+AGG + Chr1:38402339-38402358 MsG0180002439.01.T01:CDS 30.0%
TAGTTAAACAAAAAACACGC+CGG + Chr1:38400608-38400627 MsG0180002439.01.T01:intron 30.0%
TCCATAATAGCAAGATACAA+AGG - Chr1:38399626-38399645 None:intergenic 30.0%
TCTTTCTGTAAATCTTCCAA+TGG - Chr1:38397999-38398018 None:intergenic 30.0%
TGGGGTTGAAATCATATTAA+GGG - Chr1:38399368-38399387 None:intergenic 30.0%
TTGGGGTTGAAATCATATTA+AGG - Chr1:38399369-38399388 None:intergenic 30.0%
TTTAATGTTTGGATGGGTAA+GGG + Chr1:38398714-38398733 MsG0180002439.01.T01:intron 30.0%
TTTAGTTATAGAACATGGTG+CGG - Chr1:38397957-38397976 None:intergenic 30.0%
TTTGGGGATTACAACAATTT+GGG - Chr1:38399387-38399406 None:intergenic 30.0%
! AATTTTGTCACATGATGAGA+AGG - Chr1:38399947-38399966 None:intergenic 30.0%
! ATATAACTAGACGCTAGTTT+AGG + Chr1:38398233-38398252 MsG0180002439.01.T01:intron 30.0%
! ATTGATTTCATAGTTATCCG+TGG - Chr1:38398556-38398575 None:intergenic 30.0%
! CATCATATACACATTTTTCG+TGG - Chr1:38399105-38399124 None:intergenic 30.0%
! CTTTGTTTACCATGTTCAAT+AGG - Chr1:38403035-38403054 None:intergenic 30.0%
! GCTTAGCATTTTTATTAGCA+AGG - Chr1:38403563-38403582 None:intergenic 30.0%
! TAATACTTTTCTGGGTTGTT+TGG + Chr1:38396903-38396922 MsG0180002439.01.T01:intron 30.0%
! TACTAATCTTTTTCCGAAGT+TGG + Chr1:38400011-38400030 MsG0180002439.01.T01:intron 30.0%
! TCGCTTCTTTAAGTTTATTG+AGG - Chr1:38396946-38396965 None:intergenic 30.0%
! TCTGTTGATTACTTATCTCA+TGG + Chr1:38402721-38402740 MsG0180002439.01.T01:CDS 30.0%
! TCTTTGATTTCATCCAACTT+CGG - Chr1:38400027-38400046 None:intergenic 30.0%
! TGTTGGTTAATCTCTTGAAA+TGG + Chr1:38401215-38401234 MsG0180002439.01.T01:intron 30.0%
! TTGTTCGGACTTGTTTAATT+AGG + Chr1:38403734-38403753 MsG0180002439.01.T01:three_prime_UTR 30.0%
! TTTAAGTTTATTGAGGTGTG+AGG - Chr1:38396939-38396958 None:intergenic 30.0%
! TTTTAATGTTTGGATGGGTA+AGG + Chr1:38398713-38398732 MsG0180002439.01.T01:intron 30.0%
! TTTTCAATGCGGAATAAAAC+TGG - Chr1:38401733-38401752 None:intergenic 30.0%
!! ACCTTTGTATCTTGCTATTA+TGG + Chr1:38399622-38399641 MsG0180002439.01.T01:CDS 30.0%
!! ACGACTTTAGTTCTATCAAT+GGG + Chr1:38397843-38397862 MsG0180002439.01.T01:intron 30.0%
!! CCGTTTTTCTTTTTCTATTG+AGG - Chr1:38397571-38397590 None:intergenic 30.0%
!! CTGGCTTTAAAATAGAATGA+AGG - Chr1:38403149-38403168 None:intergenic 30.0%
!! GTGCAAATTTGTTATATCCA+TGG - Chr1:38398627-38398646 None:intergenic 30.0%
!! TCAAATTGCTGGTTTCTTTA+TGG + Chr1:38402237-38402256 MsG0180002439.01.T01:CDS 30.0%
!! TGATCAAGTTGAAACAATGT+GGG + Chr1:38402303-38402322 MsG0180002439.01.T01:CDS 30.0%
!!! AATTTTAAGTTACAGCAGGT+TGG + Chr1:38401566-38401585 MsG0180002439.01.T01:CDS 30.0%
!!! ACATTTTTTGCTCAAATTGC+TGG + Chr1:38402226-38402245 MsG0180002439.01.T01:CDS 30.0%
!!! AGGTAGTTTTAAGAATTGCT+TGG + Chr1:38403380-38403399 MsG0180002439.01.T01:CDS 30.0%
!!! ATTCCTTTTTTATCGACACT+TGG - Chr1:38402570-38402589 None:intergenic 30.0%
!!! GGTTTTATTGTTTTGCTGTT+TGG + Chr1:38399769-38399788 MsG0180002439.01.T01:intron 30.0%
AAAAAAGGGAAAGAGAGAGA+TGG + Chr1:38397133-38397152 MsG0180002439.01.T01:intron 35.0%
AAAAAGGGAAAGAGAGAGAT+GGG + Chr1:38397134-38397153 MsG0180002439.01.T01:intron 35.0%
AAAAATCACAGGCTCTTTCA+AGG - Chr1:38402897-38402916 None:intergenic 35.0%
AAAAATGGTGAAGTGACAAG+TGG + Chr1:38397016-38397035 MsG0180002439.01.T01:intron 35.0%
AAATTCAAGGATTCTCCAGA+TGG + Chr1:38403525-38403544 MsG0180002439.01.T01:CDS 35.0%
AACATCATTCCCATTTGCAA+GGG - Chr1:38401348-38401367 None:intergenic 35.0%
AAGATTGAGTTCAATGAGTC+AGG - Chr1:38400367-38400386 None:intergenic 35.0%
AAGGATTATGTCACTCTGTT+TGG + Chr1:38402406-38402425 MsG0180002439.01.T01:CDS 35.0%
AAGGTAATTGCGTGATTGTT+AGG - Chr1:38399928-38399947 None:intergenic 35.0%
AATGTGTGTGCTCTATCATA+CGG + Chr1:38397800-38397819 MsG0180002439.01.T01:intron 35.0%
AATTCAAGGATTCTCCAGAT+GGG + Chr1:38403526-38403545 MsG0180002439.01.T01:CDS 35.0%
ACGAATGGATGGTTCAAATA+AGG + Chr1:38401876-38401895 MsG0180002439.01.T01:CDS 35.0%
ACTATGGTATTCCTGTTACT+GGG + Chr1:38399694-38399713 MsG0180002439.01.T01:CDS 35.0%
ACTTCATGAATCCTGGTATA+AGG + Chr1:38403451-38403470 MsG0180002439.01.T01:CDS 35.0%
AGAACTAAAGTCGTGTGAAT+TGG - Chr1:38397837-38397856 None:intergenic 35.0%
AGAAGAACTATAAACAGCAC+CGG + Chr1:38398167-38398186 MsG0180002439.01.T01:intron 35.0%
AGATAGTTCAATGTGCTCAT+CGG + Chr1:38397284-38397303 MsG0180002439.01.T01:intron 35.0%
AGATTGAGTTCAATGAGTCA+GGG - Chr1:38400366-38400385 None:intergenic 35.0%
AGCACATTGAACTATCTATG+TGG - Chr1:38397281-38397300 None:intergenic 35.0%
AGCCAACAATATTTGTATGG+AGG + Chr1:38398894-38398913 MsG0180002439.01.T01:intron 35.0%
AGCTGTCCATATACTGATAA+GGG - Chr1:38397521-38397540 None:intergenic 35.0%
AGGAGTTCTGCTAGAAATAT+CGG + Chr1:38401896-38401915 MsG0180002439.01.T01:CDS 35.0%
AGGATTATGTCACTCTGTTT+GGG + Chr1:38402407-38402426 MsG0180002439.01.T01:CDS 35.0%
AGTATTCACGAAACTTCTCT+CGG - Chr1:38402129-38402148 None:intergenic 35.0%
ATAGACAAGTTTATGACTGC+CGG + Chr1:38403057-38403076 MsG0180002439.01.T01:CDS 35.0%
ATATGACAAGCACGATAAAG+AGG - Chr1:38402088-38402107 None:intergenic 35.0%
ATCAACAGAGCCTTTGATAA+AGG - Chr1:38402710-38402729 None:intergenic 35.0%
ATCACCTTTGCACTTAAATC+TGG - Chr1:38402979-38402998 None:intergenic 35.0%
ATTCACATAAGTGGGTAGTT+TGG + Chr1:38397748-38397767 MsG0180002439.01.T01:intron 35.0%
CAACAAACTGTTGATGTTCT+CGG + Chr1:38402529-38402548 MsG0180002439.01.T01:CDS 35.0%
CACATTGAGAAGAATGTTTG+CGG + Chr1:38401845-38401864 MsG0180002439.01.T01:CDS 35.0%
CTATGCATTGGATTACAAGA+AGG + Chr1:38403485-38403504 MsG0180002439.01.T01:CDS 35.0%
CTGCATTCAATACGTCAATA+AGG - Chr1:38402801-38402820 None:intergenic 35.0%
CTGGGAGAAATTTACAATGA+AGG + Chr1:38403360-38403379 MsG0180002439.01.T01:CDS 35.0%
CTTCATGAATCCTGGTATAA+GGG + Chr1:38403452-38403471 MsG0180002439.01.T01:CDS 35.0%
GAAATAATCACAGAAGAGAG+AGG - Chr1:38400797-38400816 None:intergenic 35.0%
GAACAATATATTTCAGGAGC+AGG + Chr1:38401995-38402014 MsG0180002439.01.T01:CDS 35.0%
GAATAGAATGGGTATGTCAT+AGG + Chr1:38398797-38398816 MsG0180002439.01.T01:intron 35.0%
GAGTTAAAGAGTCAACTTCA+TGG + Chr1:38401539-38401558 MsG0180002439.01.T01:CDS 35.0%
GATCGGATAACATGAATTGT+AGG + Chr1:38398772-38398791 MsG0180002439.01.T01:intron 35.0%
GCCAACAATATTTGTATGGA+GGG + Chr1:38398895-38398914 MsG0180002439.01.T01:intron 35.0%
GCTGAGGAACAATATATTTC+AGG + Chr1:38401989-38402008 MsG0180002439.01.T01:CDS 35.0%
GGACCGTATGTATTAAGAAA+TGG + Chr1:38398916-38398935 MsG0180002439.01.T01:intron 35.0%
GGAGAAAAGTTACTATGCAT+TGG + Chr1:38403473-38403492 MsG0180002439.01.T01:CDS 35.0%
GGCGACAAGAAACAAAAAAA+GGG + Chr1:38397119-38397138 MsG0180002439.01.T01:intron 35.0%
GGTGGAATCAAAGCAAAAAA+GGG + Chr1:38398062-38398081 MsG0180002439.01.T01:intron 35.0%
GGTTGAAATCATATTAAGGG+TGG - Chr1:38399365-38399384 None:intergenic 35.0%
GTACTATATGTACTCTTAGG+GGG + Chr1:38400156-38400175 MsG0180002439.01.T01:intron 35.0%
GTATTAAGAAATGGGTCAAG+TGG + Chr1:38398925-38398944 MsG0180002439.01.T01:intron 35.0%
GTCTGGTAAGATTCAACAAA+AGG - Chr1:38402208-38402227 None:intergenic 35.0%
GTGGAATCAAAGCAAAAAAG+GGG + Chr1:38398063-38398082 MsG0180002439.01.T01:intron 35.0%
GTGTATAATTCGAGCAGAAT+AGG - Chr1:38400957-38400976 None:intergenic 35.0%
GTTGTGCTGAAGATATTTCA+AGG - Chr1:38402186-38402205 None:intergenic 35.0%
GTTGTTATGAGCAAGGATAT+TGG - Chr1:38400409-38400428 None:intergenic 35.0%
TACAAGTAAGAGACTTATGG+CGG + Chr1:38399883-38399902 MsG0180002439.01.T01:intron 35.0%
TACAGGAATTCTTCTCTCTA+CGG - Chr1:38401816-38401835 None:intergenic 35.0%
TACTATATGTACTCTTAGGG+GGG + Chr1:38400157-38400176 MsG0180002439.01.T01:intron 35.0%
TAGCTGTCCATATACTGATA+AGG - Chr1:38397522-38397541 None:intergenic 35.0%
TATTGCAACAGTTCGTCAAA+GGG + Chr1:38401937-38401956 MsG0180002439.01.T01:CDS 35.0%
TCCCTCCATACAAATATTGT+TGG - Chr1:38398899-38398918 None:intergenic 35.0%
TCCTCTTCATCTGTTTCAAT+CGG + Chr1:38399295-38399314 MsG0180002439.01.T01:intron 35.0%
TGAATGTCTTTGATGTTGTG+AGG + Chr1:38402758-38402777 MsG0180002439.01.T01:CDS 35.0%
TGATTTCATGGGGATGATTT+GGG - Chr1:38399404-38399423 None:intergenic 35.0%
TGCCATCTGTGATAAATTCA+AGG + Chr1:38403512-38403531 MsG0180002439.01.T01:CDS 35.0%
TGCTGAAGATATTTCAAGGT+CGG - Chr1:38402182-38402201 None:intergenic 35.0%
TGGTGGAATCAAAGCAAAAA+AGG + Chr1:38398061-38398080 MsG0180002439.01.T01:intron 35.0%
TGTAACAGTCAAGTTTCTGA+AGG + Chr1:38401707-38401726 MsG0180002439.01.T01:CDS 35.0%
TTATCAACGAGTATCTAGCA+CGG - Chr1:38398261-38398280 None:intergenic 35.0%
TTATTCCGCATTGAAAACTG+TGG + Chr1:38401736-38401755 MsG0180002439.01.T01:CDS 35.0%
TTCATTCATTCATTCGGCAA+CGG + Chr1:38400745-38400764 MsG0180002439.01.T01:intron 35.0%
TTGGATGAAATCAAAGACTG+TGG + Chr1:38400030-38400049 MsG0180002439.01.T01:intron 35.0%
TTGGGGATTACAACAATTTG+GGG - Chr1:38399386-38399405 None:intergenic 35.0%
TTGTCGAAGGAAAAAATCAC+AGG - Chr1:38402908-38402927 None:intergenic 35.0%
TTTGACGAACTGTTGCAATA+CGG - Chr1:38401937-38401956 None:intergenic 35.0%
! ACCAACACTGAAATCGATTT+GGG - Chr1:38399485-38399504 None:intergenic 35.0%
! AGGGAGAACTAATACTTTTC+TGG + Chr1:38396894-38396913 MsG0180002439.01.T01:intron 35.0%
! ATTAGTTCTCCCTGAAAATG+AGG - Chr1:38396887-38396906 None:intergenic 35.0%
! CAAATCCACAGTTTTCAATG+CGG - Chr1:38401744-38401763 None:intergenic 35.0%
! CTATTTTCTGATGGAAAGGA+GGG + Chr1:38401169-38401188 MsG0180002439.01.T01:intron 35.0%
! CTTGTACTGATCTCAAACTA+TGG + Chr1:38400198-38400217 MsG0180002439.01.T01:intron 35.0%
! GGGAGAACTAATACTTTTCT+GGG + Chr1:38396895-38396914 MsG0180002439.01.T01:intron 35.0%
! GTGGTTTTCTTCTTCTATTG+TGG + Chr1:38403678-38403697 MsG0180002439.01.T01:three_prime_UTR 35.0%
! TAACTTTTCTCCCTTATACC+AGG - Chr1:38403465-38403484 None:intergenic 35.0%
! TCTATTTTCTGATGGAAAGG+AGG + Chr1:38401168-38401187 MsG0180002439.01.T01:intron 35.0%
! TCTCTAGTGATAGTGTCAAA+AGG + Chr1:38403253-38403272 MsG0180002439.01.T01:CDS 35.0%
!! CAAACTTTGGCTTTGAAGTA+TGG + Chr1:38398203-38398222 MsG0180002439.01.T01:intron 35.0%
!! CACGACTTTAGTTCTATCAA+TGG + Chr1:38397842-38397861 MsG0180002439.01.T01:intron 35.0%
!! CTGATCAAGTTGAAACAATG+TGG + Chr1:38402302-38402321 MsG0180002439.01.T01:CDS 35.0%
!! GAGTTTTGTGGTTAAGGAAA+AGG + Chr1:38401427-38401446 MsG0180002439.01.T01:CDS 35.0%
!! TGACCAAGTGTCGATAAAAA+AGG + Chr1:38402564-38402583 MsG0180002439.01.T01:CDS 35.0%
!! TGATGTTGTGAGGAAGTATT+TGG + Chr1:38402768-38402787 MsG0180002439.01.T01:CDS 35.0%
!!! ACTCTGATTTTTAAGGCTAG+AGG + Chr1:38398862-38398881 MsG0180002439.01.T01:intron 35.0%
!!! ATTTTTAAGGCTAGAGGCAA+TGG + Chr1:38398868-38398887 MsG0180002439.01.T01:intron 35.0%
!!! CGACAATTTTAAGTTACAGC+AGG + Chr1:38401562-38401581 MsG0180002439.01.T01:CDS 35.0%
!!! TATTGTTTTGCTGTTTGGCT+TGG + Chr1:38399774-38399793 MsG0180002439.01.T01:intron 35.0%
AAAAGGGAAAGAGAGAGATG+GGG + Chr1:38397135-38397154 MsG0180002439.01.T01:intron 40.0%
AAGAACTGCCATAACACAGA+GGG - Chr1:38399550-38399569 None:intergenic 40.0%
AATATCGGGCAAACAGCAAT+TGG + Chr1:38401911-38401930 MsG0180002439.01.T01:CDS 40.0%
ACCGATTGAAACAGATGAAG+AGG - Chr1:38399299-38399318 None:intergenic 40.0%
ACTGGAGTGAAGTCAAAACA+AGG + Chr1:38396832-38396851 MsG0180002439.01.T01:CDS 40.0%
AGAATTGCTTGGTAGAAGCA+AGG + Chr1:38403391-38403410 MsG0180002439.01.T01:CDS 40.0%
AGACAATATGGGCATGACAT+TGG + Chr1:38402439-38402458 MsG0180002439.01.T01:CDS 40.0%
AGGATTTGTCCCTTGCAAAT+GGG + Chr1:38401336-38401355 MsG0180002439.01.T01:CDS 40.0%
AGGCTAAAATCTTCGGCATA+TGG - Chr1:38400085-38400104 None:intergenic 40.0%
AGTGAGAGTGAAGAGAAGAA+AGG - Chr1:38400857-38400876 None:intergenic 40.0%
ATAGCAAGATACAAAGGTGG+TGG - Chr1:38399620-38399639 None:intergenic 40.0%
ATATGAATTCTCGAGAGGAG+AGG - Chr1:38397496-38397515 None:intergenic 40.0%
ATGATGTTGGTCCTCTTGTT+AGG + Chr1:38401360-38401379 MsG0180002439.01.T01:CDS 40.0%
ATGTGGTTCGAACTATCCAT+TGG + Chr1:38398976-38398995 MsG0180002439.01.T01:intron 40.0%
CAACATCATTCCCATTTGCA+AGG - Chr1:38401349-38401368 None:intergenic 40.0%
CACAACGACACAATTATCAG+GGG - Chr1:38397236-38397255 None:intergenic 40.0%
CACTATGGTATTCCTGTTAC+TGG + Chr1:38399693-38399712 MsG0180002439.01.T01:CDS 40.0%
CAGTAACAGGAATACCATAG+TGG - Chr1:38399695-38399714 None:intergenic 40.0%
CCAACTTTCTATTCACTCGT+GGG + Chr1:38397438-38397457 MsG0180002439.01.T01:intron 40.0%
CCTTAACCACAAAACTCATC+TGG - Chr1:38401424-38401443 None:intergenic 40.0%
CGGAGCCAACAATATTTGTA+TGG + Chr1:38398891-38398910 MsG0180002439.01.T01:intron 40.0%
CTGATCTCAAACTATGGATG+AGG + Chr1:38400204-38400223 MsG0180002439.01.T01:intron 40.0%
CTTGCAAATGGGAATGATGT+TGG + Chr1:38401347-38401366 MsG0180002439.01.T01:CDS 40.0%
GACCAACACTGAAATCGATT+TGG - Chr1:38399486-38399505 None:intergenic 40.0%
GATGAACAGTTCTATTCTGC+TGG + Chr1:38403336-38403355 MsG0180002439.01.T01:CDS 40.0%
GATTCTCCAGATGGGATATT+TGG + Chr1:38403534-38403553 MsG0180002439.01.T01:CDS 40.0%
GATTTCATGGGGATGATTTG+GGG - Chr1:38399403-38399422 None:intergenic 40.0%
GCACAACGACACAATTATCA+GGG - Chr1:38397237-38397256 None:intergenic 40.0%
GCATATTTCCAGTTCTCTAG+TGG + Chr1:38403224-38403243 MsG0180002439.01.T01:CDS 40.0%
GCTCACTCATTCACATAAGT+GGG + Chr1:38397740-38397759 MsG0180002439.01.T01:intron 40.0%
GGAGTTCTGCTAGAAATATC+GGG + Chr1:38401897-38401916 MsG0180002439.01.T01:CDS 40.0%
GGATTATGTCACTCTGTTTG+GGG + Chr1:38402408-38402427 MsG0180002439.01.T01:CDS 40.0%
GGGATATATGAATTCTCGAG+AGG - Chr1:38397501-38397520 None:intergenic 40.0%
GGGCGACAAGAAACAAAAAA+AGG + Chr1:38397118-38397137 MsG0180002439.01.T01:intron 40.0%
GGGCTACTCTTAGACAATAT+GGG + Chr1:38402428-38402447 MsG0180002439.01.T01:CDS 40.0%
GGTAAAACAGTGGAGATGAT+CGG + Chr1:38398755-38398774 MsG0180002439.01.T01:intron 40.0%
GTATTGCAACAGTTCGTCAA+AGG + Chr1:38401936-38401955 MsG0180002439.01.T01:CDS 40.0%
GTCTGTGAAGATACGTTGTT+AGG - Chr1:38397598-38397617 None:intergenic 40.0%
GTGATTTCATGGGGATGATT+TGG - Chr1:38399405-38399424 None:intergenic 40.0%
TAACACCTCAACACACTTCT+TGG - Chr1:38401672-38401691 None:intergenic 40.0%
TAGAATGGGTATGTCATAGG+AGG + Chr1:38398800-38398819 MsG0180002439.01.T01:intron 40.0%
TCAGCCAGATTTAAGTGCAA+AGG + Chr1:38402972-38402991 MsG0180002439.01.T01:CDS 40.0%
TCATATTAAGGGTGGAGCAA+TGG - Chr1:38399357-38399376 None:intergenic 40.0%
TCCAACTTTCTATTCACTCG+TGG + Chr1:38397437-38397456 MsG0180002439.01.T01:intron 40.0%
TCCAGAAGAACCAATTTCAC+AGG + Chr1:38399852-38399871 MsG0180002439.01.T01:intron 40.0%
TCTAGGGATTCATGTGATCA+TGG + Chr1:38401265-38401284 MsG0180002439.01.T01:intron 40.0%
TGAATAGGGTACAATTGAGG+TGG + Chr1:38403659-38403678 MsG0180002439.01.T01:three_prime_UTR 40.0%
TGTAGTTGAAGGAAGGAAGT+AGG + Chr1:38400531-38400550 MsG0180002439.01.T01:intron 40.0%
TTACAGTGGCCTATTGAACA+TGG + Chr1:38403023-38403042 MsG0180002439.01.T01:CDS 40.0%
TTGAAACCAAACTTCTCCTC+AGG + Chr1:38397376-38397395 MsG0180002439.01.T01:intron 40.0%
TTTCAACTTGATCAGCTACC+AGG - Chr1:38402297-38402316 None:intergenic 40.0%
TTTGCACTTAAATCTGGCTG+AGG - Chr1:38402973-38402992 None:intergenic 40.0%
TTTGCGGTCAAGTTAACGAA+TGG + Chr1:38401861-38401880 MsG0180002439.01.T01:CDS 40.0%
! AAGCCAAAGTTTGAAGCCAA+AGG - Chr1:38398196-38398215 None:intergenic 40.0%
! AATGTCCAAGAAGTGTGTTG+AGG + Chr1:38401664-38401683 MsG0180002439.01.T01:CDS 40.0%
! ACCTGTGAAATTGGTTCTTC+TGG - Chr1:38399856-38399875 None:intergenic 40.0%
! ACTGGATCACCTCATTTTCA+GGG + Chr1:38396875-38396894 MsG0180002439.01.T01:intron 40.0%
! AGAAGTTTGGTTTCAAACCC+CGG - Chr1:38397372-38397391 None:intergenic 40.0%
! AGAGAGCACGTTTATGACTT+TGG - Chr1:38399077-38399096 None:intergenic 40.0%
! AGCACAACAAATTTTACCCC+TGG + Chr1:38403167-38403186 MsG0180002439.01.T01:CDS 40.0%
! ATTTGGGGTTGAACGAGATT+TGG - Chr1:38399436-38399455 None:intergenic 40.0%
! CAACCTTTGGCTTCAAACTT+TGG + Chr1:38398190-38398209 MsG0180002439.01.T01:intron 40.0%
! CTATCAACTTGTTTCGACCT+AGG - Chr1:38397065-38397084 None:intergenic 40.0%
! GACATGTGTTGTTATGAGCA+AGG - Chr1:38400416-38400435 None:intergenic 40.0%
! GTCGAAAATGGGGTTTGTTT+GGG - Chr1:38400828-38400847 None:intergenic 40.0%
! TGTTAGGCATGCCTTTGAAA+TGG + Chr1:38401376-38401395 MsG0180002439.01.T01:CDS 40.0%
! TTATGACTGCCGGTGTTAAT+TGG + Chr1:38403067-38403086 MsG0180002439.01.T01:CDS 40.0%
! TTTGGGGTTGAACGAGATTT+GGG - Chr1:38399435-38399454 None:intergenic 40.0%
!! AAAGGTACCTGGTCGAAAAT+GGG - Chr1:38400839-38400858 None:intergenic 40.0%
!! ACCAAAGAGAAGAAGTGTTG+CGG + Chr1:38401295-38401314 MsG0180002439.01.T01:CDS 40.0%
!! AGGGGTAAAATTTGTTGTGC+TGG - Chr1:38403168-38403187 None:intergenic 40.0%
!! CAACACTGAAATCGATTTGG+GGG - Chr1:38399483-38399502 None:intergenic 40.0%
!! CCAACACTGAAATCGATTTG+GGG - Chr1:38399484-38399503 None:intergenic 40.0%
!! CCAGATGAGTTTTGTGGTTA+AGG + Chr1:38401421-38401440 MsG0180002439.01.T01:CDS 40.0%
!! CTAGGTCGAAACAAGTTGAT+AGG + Chr1:38397063-38397082 MsG0180002439.01.T01:intron 40.0%
!! GAACATCAACAGTTTGTTGC+CGG - Chr1:38402528-38402547 None:intergenic 40.0%
!! GATGAGAGCACCAAATGATA+AGG + Chr1:38398831-38398850 MsG0180002439.01.T01:intron 40.0%
!! GTTAGGCATGCCTTTGAAAT+GGG + Chr1:38401377-38401396 MsG0180002439.01.T01:CDS 40.0%
!! TATGTCATAGGAGGTGTTCA+AGG + Chr1:38398809-38398828 MsG0180002439.01.T01:intron 40.0%
!! TCTCTCGCTTTTGACATAGT+GGG + Chr1:38397160-38397179 MsG0180002439.01.T01:intron 40.0%
!! TGCTGGTTTCTTTATGGTTG+AGG + Chr1:38402243-38402262 MsG0180002439.01.T01:CDS 40.0%
!! TTCTCTCGCTTTTGACATAG+TGG + Chr1:38397159-38397178 MsG0180002439.01.T01:intron 40.0%
!! TTGCACACATCGACTTTGAA+TGG - Chr1:38399984-38400003 None:intergenic 40.0%
AAACCAAACTTCTCCTCAGG+AGG + Chr1:38397379-38397398 MsG0180002439.01.T01:intron 45.0%
AAGTCGTTACCTTAACCGCA+AGG + Chr1:38396782-38396801 MsG0180002439.01.T01:CDS 45.0%
ACAGTTCTATTCTGCTGGTC+TGG + Chr1:38403341-38403360 MsG0180002439.01.T01:CDS 45.0%
ACATGGTGAAGGTGATTGAG+AGG - Chr1:38399329-38399348 None:intergenic 45.0%
ACCACTGTTCCAACACATGT+AGG + Chr1:38397900-38397919 MsG0180002439.01.T01:intron 45.0%
ACCTACATGTGTTGGAACAG+TGG - Chr1:38397904-38397923 None:intergenic 45.0%
AGAACTGCCATAACACAGAG+GGG - Chr1:38399549-38399568 None:intergenic 45.0%
AGAGGTGATCTCGTAGTTCT+TGG - Chr1:38397620-38397639 None:intergenic 45.0%
AGCTTCTGTTGGAAGAATGC+CGG + Chr1:38402506-38402525 MsG0180002439.01.T01:CDS 45.0%
AGGCTTCCAAATATCCCATC+TGG - Chr1:38403543-38403562 None:intergenic 45.0%
AGGTGATCTTGAAAACGTCG+AGG + Chr1:38402992-38403011 MsG0180002439.01.T01:CDS 45.0%
ATACCATAGTGGCTTTCGAG+AGG - Chr1:38399684-38399703 None:intergenic 45.0%
ATAGAGTCCTCAGAACTGCT+GGG + Chr1:38402266-38402285 MsG0180002439.01.T01:CDS 45.0%
ATGAGTCAGGGAGGTTCAAA+AGG - Chr1:38400354-38400373 None:intergenic 45.0%
ATGTTTGGATGGGTAAGGGT+TGG + Chr1:38398718-38398737 MsG0180002439.01.T01:intron 45.0%
ATTCTTCCAACAGAAGCTGG+TGG - Chr1:38402504-38402523 None:intergenic 45.0%
CAATGGACGTGCTCAAAAAG+CGG + Chr1:38403601-38403620 MsG0180002439.01.T01:CDS 45.0%
CAATGGATACGACATGGTGA+AGG - Chr1:38399340-38399359 None:intergenic 45.0%
CACAGACAGCAGTACTGTTT+GGG - Chr1:38400673-38400692 None:intergenic 45.0%
CCCACGAGTGAATAGAAAGT+TGG - Chr1:38397441-38397460 None:intergenic 45.0%
CCTGAGGAGACAAATCAGAA+TGG + Chr1:38403093-38403112 MsG0180002439.01.T01:CDS 45.0%
CCTTCACAGTATTCCTCTGA+AGG + Chr1:38401778-38401797 MsG0180002439.01.T01:CDS 45.0%
CCTTCAGAGGAATACTGTGA+AGG - Chr1:38401781-38401800 None:intergenic 45.0%
CGCTCACTCATTCACATAAG+TGG + Chr1:38397739-38397758 MsG0180002439.01.T01:intron 45.0%
CGGTCAAGTTAACGAATGGA+TGG + Chr1:38401865-38401884 MsG0180002439.01.T01:CDS 45.0%
CGTACTTCTCCTGTTTGAAC+CGG + Chr1:38397350-38397369 MsG0180002439.01.T01:intron 45.0%
CTCAGGAGTCCAATTAACAC+CGG - Chr1:38403079-38403098 None:intergenic 45.0%
GAACAGTGGTCTAAATCGAG+TGG - Chr1:38397890-38397909 None:intergenic 45.0%
GAAGAACTGCCATAACACAG+AGG - Chr1:38399551-38399570 None:intergenic 45.0%
GAGGAGAATGGTGCAACATA+TGG - Chr1:38402655-38402674 None:intergenic 45.0%
GAGGATTTGTCCCTTGCAAA+TGG + Chr1:38401335-38401354 MsG0180002439.01.T01:CDS 45.0%
GAGTGACATAATCCTTCACC+AGG - Chr1:38402402-38402421 None:intergenic 45.0%
GATATCAAACCCAGCGATGA+TGG - Chr1:38399725-38399744 None:intergenic 45.0%
GATGCTAGAACAGCAGAGAA+AGG + Chr1:38401967-38401986 MsG0180002439.01.T01:CDS 45.0%
GATGTGCAAGACTCATTACG+AGG + Chr1:38401466-38401485 MsG0180002439.01.T01:CDS 45.0%
GCCTTTCAATTGATCGGCAA+GGG - Chr1:38402951-38402970 None:intergenic 45.0%
GCTCTTCAAGCTTGACAAGA+AGG - Chr1:38401598-38401617 None:intergenic 45.0%
GCTGAGAACTTCATGAATCC+TGG + Chr1:38403444-38403463 MsG0180002439.01.T01:CDS 45.0%
GCTGAGGCCTTTCAATTGAT+CGG - Chr1:38402957-38402976 None:intergenic 45.0%
GGAAAAGGAAGCTGAAATCG+AGG + Chr1:38401442-38401461 MsG0180002439.01.T01:CDS 45.0%
GGCACAACGACACAATTATC+AGG - Chr1:38397238-38397257 None:intergenic 45.0%
GGGAAGAAGGTGATTTCATG+GGG - Chr1:38399414-38399433 None:intergenic 45.0%
GGGGAAGAAGGTGATTTCAT+GGG - Chr1:38399415-38399434 None:intergenic 45.0%
GGGGCTACTCTTAGACAATA+TGG + Chr1:38402427-38402446 MsG0180002439.01.T01:CDS 45.0%
GGTCTAAATCGAGTGGAAGT+TGG - Chr1:38397883-38397902 None:intergenic 45.0%
GGTGATCTTGAAAACGTCGA+GGG + Chr1:38402993-38403012 MsG0180002439.01.T01:CDS 45.0%
GGTGCAACATATGGAAAAGC+AGG - Chr1:38402646-38402665 None:intergenic 45.0%
GTACTTCTCCTGTTTGAACC+GGG + Chr1:38397351-38397370 MsG0180002439.01.T01:intron 45.0%
TACCATAGTGGCTTTCGAGA+GGG - Chr1:38399683-38399702 None:intergenic 45.0%
TACTTCTCCTGTTTGAACCG+GGG + Chr1:38397352-38397371 MsG0180002439.01.T01:intron 45.0%
TATCCTCCTGAGGAGAAGTT+TGG - Chr1:38397385-38397404 None:intergenic 45.0%
TATCTCTCGAGCACAGGTTT+AGG + Chr1:38397540-38397559 MsG0180002439.01.T01:intron 45.0%
TCAAAACAAGGTAGCCGTAC+TGG + Chr1:38396844-38396863 MsG0180002439.01.T01:intron 45.0%
TCACAGACAGCAGTACTGTT+TGG - Chr1:38400674-38400693 None:intergenic 45.0%
TCATCCAAGGCACATTAGCA+TGG + Chr1:38397327-38397346 MsG0180002439.01.T01:intron 45.0%
TCCCTTGCCGATCAATTGAA+AGG + Chr1:38402947-38402966 MsG0180002439.01.T01:CDS 45.0%
TCCGCAACACTTCTTCTCTT+TGG - Chr1:38401299-38401318 None:intergenic 45.0%
TGAACGAGATTTGGGGAAGA+AGG - Chr1:38399427-38399446 None:intergenic 45.0%
TGATGGAATAGCCCAGTAAC+AGG - Chr1:38399708-38399727 None:intergenic 45.0%
TGCGGTTAAGGTAACGACTT+CGG - Chr1:38396782-38396801 None:intergenic 45.0%
TGGGGAAGAAGGTGATTTCA+TGG - Chr1:38399416-38399435 None:intergenic 45.0%
TGTTTGGATGGGTAAGGGTT+GGG + Chr1:38398719-38398738 MsG0180002439.01.T01:intron 45.0%
TTCTATTCACTCGTGGGATC+CGG + Chr1:38397444-38397463 MsG0180002439.01.T01:intron 45.0%
TTCTCCTCAGGAGGATACAT+GGG + Chr1:38397388-38397407 MsG0180002439.01.T01:intron 45.0%
TTCTTCGGCATCCAAAGTGT+AGG - Chr1:38402029-38402048 None:intergenic 45.0%
TTGAGTTCAATGAGTCAGGG+AGG - Chr1:38400363-38400382 None:intergenic 45.0%
TTGGGGTTGAACGAGATTTG+GGG - Chr1:38399434-38399453 None:intergenic 45.0%
TTTAACTACCTTGTGACCGC+CGG + Chr1:38399514-38399533 MsG0180002439.01.T01:intron 45.0%
TTTCAAACCCCGGTTCAAAC+AGG - Chr1:38397362-38397381 None:intergenic 45.0%
! AACAAACCCCATTTTCGACC+AGG + Chr1:38400829-38400848 MsG0180002439.01.T01:intron 45.0%
! AAGGTACCTGGTCGAAAATG+GGG - Chr1:38400838-38400857 None:intergenic 45.0%
! AGTTTGAAGCCAAAGGTTGC+CGG - Chr1:38398189-38398208 None:intergenic 45.0%
! CAGTTCTATTCTGCTGGTCT+GGG + Chr1:38403342-38403361 MsG0180002439.01.T01:CDS 45.0%
! CCATTCTGATTTGTCTCCTC+AGG - Chr1:38403096-38403115 None:intergenic 45.0%
! CCCCAAATCGATTTCAGTGT+TGG + Chr1:38399481-38399500 MsG0180002439.01.T01:intron 45.0%
! CGTCTAGCGCTGTTCTTTTT+AGG - Chr1:38398139-38398158 None:intergenic 45.0%
! GAAAATGGGGTTTGTTTGGG+TGG - Chr1:38400825-38400844 None:intergenic 45.0%
! GACTGGATCACCTCATTTTC+AGG + Chr1:38396874-38396893 MsG0180002439.01.T01:intron 45.0%
! GATAATTGTGTCGTTGTGCC+TGG + Chr1:38397238-38397257 MsG0180002439.01.T01:intron 45.0%
! GGTCGAAAATGGGGTTTGTT+TGG - Chr1:38400829-38400848 None:intergenic 45.0%
! GTTGAGGTGTTAGAGCTTTG+CGG + Chr1:38401680-38401699 MsG0180002439.01.T01:CDS 45.0%
! TCAAAGGCATGCCTAACAAG+AGG - Chr1:38401374-38401393 None:intergenic 45.0%
! TCTTCGCCAGATGAGTTTTG+TGG + Chr1:38401415-38401434 MsG0180002439.01.T01:CDS 45.0%
! TGGTGGTGAAGGTAAAACAG+TGG + Chr1:38398745-38398764 MsG0180002439.01.T01:intron 45.0%
! TTTAAGGCTAGAGGCAATGG+CGG + Chr1:38398871-38398890 MsG0180002439.01.T01:intron 45.0%
!! AGAAGAAGTGTTGCGGAGAA+TGG + Chr1:38401302-38401321 MsG0180002439.01.T01:CDS 45.0%
!! AGATACAAAGGTGGTGGATG+TGG - Chr1:38399614-38399633 None:intergenic 45.0%
!! GAAAGGTACCTGGTCGAAAA+TGG - Chr1:38400840-38400859 None:intergenic 45.0%
!! GTGAAGAGAAGAAAGGTACC+TGG - Chr1:38400850-38400869 None:intergenic 45.0%
!! TGAAATCGATTTGGGGGTGA+GGG - Chr1:38399477-38399496 None:intergenic 45.0%
!!! TTAAATTAAATTTTGTAAAA+TGG - Chr1:38398410-38398429 None:intergenic 5.0%
AACAAGGTAGCCGTACTGGA+AGG + Chr1:38396848-38396867 MsG0180002439.01.T01:intron 50.0%
AACAATGTGGGAGACAGCTG+TGG + Chr1:38402315-38402334 MsG0180002439.01.T01:CDS 50.0%
AACTCTGTGCATGGCATCCA+GGG - Chr1:38403187-38403206 None:intergenic 50.0%
AATTCCCCTCCTTGCGGTTA+AGG - Chr1:38396794-38396813 None:intergenic 50.0%
ACACACATCAGGTACCATGG+AGG - Chr1:38402674-38402693 None:intergenic 50.0%
ACACACATTCGCAAATGCGC+CGG - Chr1:38400630-38400649 None:intergenic 50.0%
AGAACAGCAGAGAAAGGCTG+AGG + Chr1:38401973-38401992 MsG0180002439.01.T01:CDS 50.0%
AGAGGAGCAGTTCTCCTCTA+TGG + Chr1:38402357-38402376 MsG0180002439.01.T01:CDS 50.0%
AGCTCCCTAAACCCTAGCAA+AGG - Chr1:38399262-38399281 None:intergenic 50.0%
AGTGTTGCGGAGAATGGTGA+TGG + Chr1:38401308-38401327 MsG0180002439.01.T01:CDS 50.0%
ATAGTTGGGCTGCTTGTCGA+AGG - Chr1:38402921-38402940 None:intergenic 50.0%
CAACTTGATCAGCTACCAGG+AGG - Chr1:38402294-38402313 None:intergenic 50.0%
CACACATCTTCTCCTGGTGA+AGG + Chr1:38402387-38402406 MsG0180002439.01.T01:CDS 50.0%
CCACCCTTTGCTAGGGTTTA+GGG + Chr1:38399255-38399274 MsG0180002439.01.T01:intron 50.0%
CCTGAGATGTGGATCATCCA+AGG + Chr1:38397314-38397333 MsG0180002439.01.T01:intron 50.0%
CCTTGGATGATCCACATCTC+AGG - Chr1:38397317-38397336 None:intergenic 50.0%
CGCATTTGCGAATGTGTGTC+GGG + Chr1:38400631-38400650 MsG0180002439.01.T01:intron 50.0%
CGTGCTCAAAAAGCGGCTTA+AGG + Chr1:38403608-38403627 MsG0180002439.01.T01:CDS 50.0%
CGTTACCTTAACCGCAAGGA+GGG + Chr1:38396786-38396805 MsG0180002439.01.T01:CDS 50.0%
CTCACAATGCGACACACATC+AGG - Chr1:38402685-38402704 None:intergenic 50.0%
CTTCACCAGGAGAAGATGTG+TGG - Chr1:38402389-38402408 None:intergenic 50.0%
CTTCTCCTCAGGAGGATACA+TGG + Chr1:38397387-38397406 MsG0180002439.01.T01:intron 50.0%
CTTGGTAGAAGCAAGGCAGT+TGG + Chr1:38403398-38403417 MsG0180002439.01.T01:CDS 50.0%
GAAAGCAGCCACTAGAGAAC+TGG - Chr1:38403235-38403254 None:intergenic 50.0%
GAAGCTGGTGGTACTTCTCA+TGG - Chr1:38402492-38402511 None:intergenic 50.0%
GAGCTAATAGCCCGTTGTGT+GGG - Chr1:38397199-38397218 None:intergenic 50.0%
GATAGAGTCCTCAGAACTGC+TGG + Chr1:38402265-38402284 MsG0180002439.01.T01:CDS 50.0%
GATGATCCACATCTCAGGTC+AGG - Chr1:38397312-38397331 None:intergenic 50.0%
GCAAGGGATGCCACATAGTT+GGG - Chr1:38402935-38402954 None:intergenic 50.0%
GCAGTTCTCCTCTATGGAGT+CGG + Chr1:38402363-38402382 MsG0180002439.01.T01:CDS 50.0%
GCGCATTTGCGAATGTGTGT+CGG + Chr1:38400630-38400649 MsG0180002439.01.T01:intron 50.0%
GCGGTTAAGGTAACGACTTC+GGG - Chr1:38396781-38396800 None:intergenic 50.0%
GCTCCCTAAACCCTAGCAAA+GGG - Chr1:38399261-38399280 None:intergenic 50.0%
GGCATTCTTCCAACAGAAGC+TGG - Chr1:38402507-38402526 None:intergenic 50.0%
GGCCTTTCAATTGATCGGCA+AGG - Chr1:38402952-38402971 None:intergenic 50.0%
GGCGAGGTGGGACAAAAAAA+GGG - Chr1:38397093-38397112 None:intergenic 50.0%
GGCGGTCACAAGGTAGTTAA+AGG - Chr1:38399515-38399534 None:intergenic 50.0%
GGTGTCTTGAGTTTGATCCC+TGG - Chr1:38399056-38399075 None:intergenic 50.0%
GGTGTTTCCCCTCTGTGTTA+TGG + Chr1:38399539-38399558 MsG0180002439.01.T01:intron 50.0%
GTGGAGCAATGGATACGACA+TGG - Chr1:38399346-38399365 None:intergenic 50.0%
GTTACCTTAACCGCAAGGAG+GGG + Chr1:38396787-38396806 MsG0180002439.01.T01:CDS 50.0%
TAAGGTAACGACTTCGGGCA+TGG - Chr1:38396776-38396795 None:intergenic 50.0%
TACGCCATGCTAATGTGCCT+TGG - Chr1:38397334-38397353 None:intergenic 50.0%
TAGAGTCCTCAGAACTGCTG+GGG + Chr1:38402267-38402286 MsG0180002439.01.T01:CDS 50.0%
TCAGGTACCATGGAGGAGAA+TGG - Chr1:38402667-38402686 None:intergenic 50.0%
TCCACCCTTTGCTAGGGTTT+AGG + Chr1:38399254-38399273 MsG0180002439.01.T01:intron 50.0%
TCGTTACCTTAACCGCAAGG+AGG + Chr1:38396785-38396804 MsG0180002439.01.T01:CDS 50.0%
TCTATTCACTCGTGGGATCC+GGG + Chr1:38397445-38397464 MsG0180002439.01.T01:intron 50.0%
TCTCCTCAGGAGGATACATG+GGG + Chr1:38397389-38397408 MsG0180002439.01.T01:intron 50.0%
TGAGCTAATAGCCCGTTGTG+TGG - Chr1:38397200-38397219 None:intergenic 50.0%
TGCTAGGGTTTAGGGAGCTA+TGG + Chr1:38399263-38399282 MsG0180002439.01.T01:intron 50.0%
TGGATGCCATGCACAGAGTT+GGG + Chr1:38403187-38403206 MsG0180002439.01.T01:CDS 50.0%
TGGGCTATTCCATCATCGCT+GGG + Chr1:38399713-38399732 MsG0180002439.01.T01:CDS 50.0%
TGTTGCACCATTCTCCTCCA+TGG + Chr1:38402657-38402676 MsG0180002439.01.T01:CDS 50.0%
TTCCCTCTCGAAAGCCACTA+TGG + Chr1:38399678-38399697 MsG0180002439.01.T01:CDS 50.0%
TTGCGAATGTGTGTCGGGTT+GGG + Chr1:38400636-38400655 MsG0180002439.01.T01:intron 50.0%
TTTGCGAATGTGTGTCGGGT+TGG + Chr1:38400635-38400654 MsG0180002439.01.T01:intron 50.0%
! CGGTGTTAATTGGACTCCTG+AGG + Chr1:38403077-38403096 MsG0180002439.01.T01:CDS 50.0%
! CTCGAGCACAGGTTTAGGTT+TGG + Chr1:38397545-38397564 MsG0180002439.01.T01:intron 50.0%
! GAAGTACCACCAGCTTCTGT+TGG + Chr1:38402495-38402514 MsG0180002439.01.T01:CDS 50.0%
! TCCTCTGAAGGCTCTCAAAG+TGG + Chr1:38401790-38401809 MsG0180002439.01.T01:CDS 50.0%
! TTGTTTCTTGTCGCCCCACT+GGG - Chr1:38397114-38397133 None:intergenic 50.0%
! TTTGAAATGGGACGGCCAGA+GGG + Chr1:38401389-38401408 MsG0180002439.01.T01:CDS 50.0%
! TTTGTTTCTTGTCGCCCCAC+TGG - Chr1:38397115-38397134 None:intergenic 50.0%
!! ACAACGGGCTATTAGCTCAG+TGG + Chr1:38397201-38397220 MsG0180002439.01.T01:intron 50.0%
!! CTGAAATCGATTTGGGGGTG+AGG - Chr1:38399478-38399497 None:intergenic 50.0%
!! GGCATGCCTTTGAAATGGGA+CGG + Chr1:38401381-38401400 MsG0180002439.01.T01:CDS 50.0%
!! TAAACAGCACCGGCAACCTT+TGG + Chr1:38398177-38398196 MsG0180002439.01.T01:intron 50.0%
!! TACAAAGGTGGTGGATGTGG+TGG - Chr1:38399611-38399630 None:intergenic 50.0%
!! TTGCGGAGAATGGTGATGGT+GGG + Chr1:38401312-38401331 MsG0180002439.01.T01:CDS 50.0%
!! TTTGACATAGTGGGCCCCTA+CGG + Chr1:38397169-38397188 MsG0180002439.01.T01:intron 50.0%
ACCACTCCCAACTCTGTGCA+TGG - Chr1:38403196-38403215 None:intergenic 55.0%
ACCCTAGCAAAGGGTGGAAG+CGG - Chr1:38399252-38399271 None:intergenic 55.0%
ACCGCTTCCACCCTTTGCTA+GGG + Chr1:38399248-38399267 MsG0180002439.01.T01:intron 55.0%
ACTCTGTGCATGGCATCCAG+GGG - Chr1:38403186-38403205 None:intergenic 55.0%
AGGGAGTCTCGCCTACACTT+TGG + Chr1:38402015-38402034 MsG0180002439.01.T01:CDS 55.0%
ATGGAGGCGGCGAGCTATTT+GGG - Chr1:38399452-38399471 None:intergenic 55.0%
CAACTCTGTGCATGGCATCC+AGG - Chr1:38403188-38403207 None:intergenic 55.0%
CACAGAGGGGAAACACCAAC+CGG - Chr1:38399536-38399555 None:intergenic 55.0%
CACGAAGCTCATCGACAGCA+AGG - Chr1:38401499-38401518 None:intergenic 55.0%
CCCTAAACCCTAGCAAAGGG+TGG - Chr1:38399258-38399277 None:intergenic 55.0%
CGACAAGCAGCCCAACTATG+TGG + Chr1:38402922-38402941 MsG0180002439.01.T01:CDS 55.0%
CTCTGGCCGTCCCATTTCAA+AGG - Chr1:38401390-38401409 None:intergenic 55.0%
CTGGATGCCATGCACAGAGT+TGG + Chr1:38403186-38403205 MsG0180002439.01.T01:CDS 55.0%
CTGGGCTATTCCATCATCGC+TGG + Chr1:38399712-38399731 MsG0180002439.01.T01:CDS 55.0%
CTTCGGAATTCCCCTCCTTG+CGG - Chr1:38396800-38396819 None:intergenic 55.0%
GACAGCTATCTCTCGAGCAC+AGG + Chr1:38397534-38397553 MsG0180002439.01.T01:intron 55.0%
GAGGATACATGGGGCGATTC+AGG + Chr1:38397398-38397417 MsG0180002439.01.T01:intron 55.0%
GATGGGTAAGGGTTGGGAGA+TGG + Chr1:38398725-38398744 MsG0180002439.01.T01:intron 55.0%
GCGACACACATCAGGTACCA+TGG - Chr1:38402677-38402696 None:intergenic 55.0%
GGCAAGGGATGCCACATAGT+TGG - Chr1:38402936-38402955 None:intergenic 55.0%
GGGCGAGGTGGGACAAAAAA+AGG - Chr1:38397094-38397113 None:intergenic 55.0%
TCCAGTCGCACCTTCCAGTA+CGG - Chr1:38396861-38396880 None:intergenic 55.0%
TCGTTGTGCCTGGACTGTGA+GGG + Chr1:38397248-38397267 MsG0180002439.01.T01:intron 55.0%
TGGAAGCGGTGCAAGGACTT+GGG - Chr1:38399238-38399257 None:intergenic 55.0%
TTGAAATGGGACGGCCAGAG+GGG + Chr1:38401390-38401409 MsG0180002439.01.T01:CDS 55.0%
! ATGTGTGGCCGACTCCATAG+AGG - Chr1:38402374-38402393 None:intergenic 55.0%
! CTTGCTGTCGATGAGCTTCG+TGG + Chr1:38401497-38401516 MsG0180002439.01.T01:CDS 55.0%
! GCCACTTTGAGAGCCTTCAG+AGG - Chr1:38401794-38401813 None:intergenic 55.0%
! GCTGTCTGTGAGTGCTGCTA+GGG + Chr1:38400683-38400702 MsG0180002439.01.T01:intron 55.0%
! TGCTGTCTGTGAGTGCTGCT+AGG + Chr1:38400682-38400701 MsG0180002439.01.T01:intron 55.0%
!! AAAGGTGGTGGATGTGGTGG+TGG - Chr1:38399608-38399627 None:intergenic 55.0%
!! CTTTGAAATGGGACGGCCAG+AGG + Chr1:38401388-38401407 MsG0180002439.01.T01:CDS 55.0%
!! GTTGCGGAGAATGGTGATGG+TGG + Chr1:38401311-38401330 MsG0180002439.01.T01:CDS 55.0%
!! TGCGGAGAATGGTGATGGTG+GGG + Chr1:38401313-38401332 MsG0180002439.01.T01:CDS 55.0%
!! TGGATGTGGTGGTGGACGAT+CGG - Chr1:38399600-38399619 None:intergenic 55.0%
!! TTGACATAGTGGGCCCCTAC+GGG + Chr1:38397170-38397189 MsG0180002439.01.T01:intron 55.0%
AACACCAACCGGCGGTCACA+AGG - Chr1:38399525-38399544 None:intergenic 60.0%
ACACACCGCCCGTCACACTA+TGG + Chr1:38396743-38396762 MsG0180002439.01.T01:CDS 60.0%
ACTACCTTGTGACCGCCGGT+TGG + Chr1:38399518-38399537 MsG0180002439.01.T01:intron 60.0%
AGAGGGGAAACACCAACCGG+CGG - Chr1:38399533-38399552 None:intergenic 60.0%
AGGAGGGGAATTCCGAAGGC+AGG + Chr1:38396802-38396821 MsG0180002439.01.T01:CDS 60.0%
ATCTGGCGAAGAAGCCCCTC+TGG - Chr1:38401407-38401426 None:intergenic 60.0%
ATTCACTCGTGGGATCCGGG+CGG + Chr1:38397448-38397467 MsG0180002439.01.T01:intron 60.0%
CAAAGGGTGGAAGCGGTGCA+AGG - Chr1:38399245-38399264 None:intergenic 60.0%
CACACCGCCCGTCACACTAT+GGG + Chr1:38396744-38396763 MsG0180002439.01.T01:CDS 60.0%
CACCGCTTCCACCCTTTGCT+AGG + Chr1:38399247-38399266 MsG0180002439.01.T01:intron 60.0%
CCAGTCACTAGCCCTGCCTT+CGG - Chr1:38396817-38396836 None:intergenic 60.0%
CCTACGGGAAGCCCACACAA+CGG + Chr1:38397185-38397204 MsG0180002439.01.T01:intron 60.0%
CGAGAGGAGAGGAGCCATGA+TGG - Chr1:38397485-38397504 None:intergenic 60.0%
CGCAAGGAGGGGAATTCCGA+AGG + Chr1:38396798-38396817 MsG0180002439.01.T01:CDS 60.0%
CGTTGTGTGGGCTTCCCGTA+GGG - Chr1:38397187-38397206 None:intergenic 60.0%
CTACGGGAAGCCCACACAAC+GGG + Chr1:38397186-38397205 MsG0180002439.01.T01:intron 60.0%
GATGGAGGCGGCGAGCTATT+TGG - Chr1:38399453-38399472 None:intergenic 60.0%
GCCAGCTCCCATAGTGTGAC+GGG - Chr1:38396754-38396773 None:intergenic 60.0%
GCCATGCACAGAGTTGGGAG+TGG + Chr1:38403192-38403211 MsG0180002439.01.T01:CDS 60.0%
GGAAGCGGTGCAAGGACTTG+GGG - Chr1:38399237-38399256 None:intergenic 60.0%
GGAGGGGAATTCCGAAGGCA+GGG + Chr1:38396803-38396822 MsG0180002439.01.T01:CDS 60.0%
GGCCAGCTCCCATAGTGTGA+CGG - Chr1:38396755-38396774 None:intergenic 60.0%
GGGTAAGGGTTGGGAGATGG+TGG + Chr1:38398728-38398747 MsG0180002439.01.T01:intron 60.0%
GTCGGCCACACATCTTCTCC+TGG + Chr1:38402381-38402400 MsG0180002439.01.T01:CDS 60.0%
GTCGTTGTGCCTGGACTGTG+AGG + Chr1:38397247-38397266 MsG0180002439.01.T01:intron 60.0%
GTGGAAGCGGTGCAAGGACT+TGG - Chr1:38399239-38399258 None:intergenic 60.0%
GTTGTGTGGGCTTCCCGTAG+GGG - Chr1:38397186-38397205 None:intergenic 60.0%
TCGAGGGACGCAGCTTACAG+TGG + Chr1:38403009-38403028 MsG0180002439.01.T01:CDS 60.0%
TCGCCCCATGTATCCTCCTG+AGG - Chr1:38397395-38397414 None:intergenic 60.0%
TCGGACGGAGGAAGGCTTGA+CGG - Chr1:38399581-38399600 None:intergenic 60.0%
TGGAGGCGGCGAGCTATTTG+GGG - Chr1:38399451-38399470 None:intergenic 60.0%
TTTGTCCCACCTCGCCCAGT+GGG + Chr1:38397097-38397116 MsG0180002439.01.T01:intron 60.0%
! AGCTCCCATAGTGTGACGGG+CGG - Chr1:38396751-38396770 None:intergenic 60.0%
! GGGTTGGGAGATGGTGGTGA+AGG + Chr1:38398734-38398753 MsG0180002439.01.T01:intron 60.0%
! TTTTGTCCCACCTCGCCCAG+TGG + Chr1:38397096-38397115 MsG0180002439.01.T01:intron 60.0%
!! GGAGAATGGTGATGGTGGGG+AGG + Chr1:38401316-38401335 MsG0180002439.01.T01:CDS 60.0%
!! TGTGACGGGCGGTGTGTACA+AGG - Chr1:38396740-38396759 None:intergenic 60.0%
!! TGTGGTGGTGGACGATCGGA+CGG - Chr1:38399596-38399615 None:intergenic 60.0%
CAGAACTGCTGGGGTCCTCC+TGG + Chr1:38402276-38402295 MsG0180002439.01.T01:CDS 65.0%
CCGTTGTGTGGGCTTCCCGT+AGG - Chr1:38397188-38397207 None:intergenic 65.0%
GACGGAGGAAGGCTTGACGG+AGG - Chr1:38399578-38399597 None:intergenic 65.0%
GCCCGTCACACTATGGGAGC+TGG + Chr1:38396750-38396769 MsG0180002439.01.T01:CDS 65.0%
GCTGAGAGCCCTCACAGTCC+AGG - Chr1:38397259-38397278 None:intergenic 65.0%
GGAGGACCCCAGCAGTTCTG+AGG - Chr1:38402276-38402295 None:intergenic 65.0%
GTGGACGATCGGACGGAGGA+AGG - Chr1:38399589-38399608 None:intergenic 65.0%
TCGGCGCCTGACCTGAGATG+TGG + Chr1:38397303-38397322 MsG0180002439.01.T01:intron 65.0%
TTGTCCCACCTCGCCCAGTG+GGG + Chr1:38397098-38397117 MsG0180002439.01.T01:intron 65.0%
TTTGGGGGTGAGGGCGATGG+AGG - Chr1:38399468-38399487 None:intergenic 65.0%
! CCGAAGGCAGGGCTAGTGAC+TGG + Chr1:38396814-38396833 MsG0180002439.01.T01:CDS 65.0%
! CGATTTGGGGGTGAGGGCGA+TGG - Chr1:38399471-38399490 None:intergenic 65.0%
! GCCGTACTGGAAGGTGCGAC+TGG + Chr1:38396857-38396876 MsG0180002439.01.T01:intron 65.0%
CGGGCGGTGTGTACAAGGCC+CGG - Chr1:38396735-38396754 None:intergenic 70.0%
CGGTCCAGGGGGGACCATCA+TGG + Chr1:38397468-38397487 MsG0180002439.01.T01:intron 70.0%
GGAGCCATGATGGTCCCCCC+TGG - Chr1:38397475-38397494 None:intergenic 70.0%
GGGCGGTGTGTACAAGGCCC+GGG - Chr1:38396734-38396753 None:intergenic 70.0%
TCTTGTCGCCCCACTGGGCG+AGG - Chr1:38397109-38397128 None:intergenic 70.0%
!! GGTGGTGGACGATCGGACGG+AGG - Chr1:38399593-38399612 None:intergenic 70.0%
ATGGTCCCCCCTGGACCGCC+CGG - Chr1:38397466-38397485 None:intergenic 75.0%
CGTGGGATCCGGGCGGTCCA+GGG + Chr1:38397455-38397474 MsG0180002439.01.T01:intron 75.0%
GGGGGTGAGGGCGATGGAGG+CGG - Chr1:38399465-38399484 None:intergenic 75.0%
GTCGCCCCACTGGGCGAGGT+GGG - Chr1:38397105-38397124 None:intergenic 75.0%
GTGGGATCCGGGCGGTCCAG+GGG + Chr1:38397456-38397475 MsG0180002439.01.T01:intron 75.0%
TCGTGGGATCCGGGCGGTCC+AGG + Chr1:38397454-38397473 MsG0180002439.01.T01:intron 75.0%
TGGGATCCGGGCGGTCCAGG+GGG + Chr1:38397457-38397476 MsG0180002439.01.T01:intron 75.0%
TGTCGCCCCACTGGGCGAGG+TGG - Chr1:38397106-38397125 None:intergenic 75.0%
! GGGATCCGGGCGGTCCAGGG+GGG + Chr1:38397458-38397477 MsG0180002439.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 38396720 38403794 38396720 ID=MsG0180002439.01;Name=MsG0180002439.01
Chr1 mRNA 38396720 38403794 38396720 ID=MsG0180002439.01.T01;Parent=MsG0180002439.01;Name=MsG0180002439.01.T01;_AED=0.31;_eAED=0.35;_QI=0|0|0.33|0.66|1|1|3|153|891
Chr1 exon 38401270 38403794 38401270 ID=MsG0180002439.01.T01:exon:12871;Parent=MsG0180002439.01.T01
Chr1 exon 38399565 38399734 38399565 ID=MsG0180002439.01.T01:exon:12870;Parent=MsG0180002439.01.T01
Chr1 exon 38396720 38396853 38396720 ID=MsG0180002439.01.T01:exon:12869;Parent=MsG0180002439.01.T01
Chr1 CDS 38396720 38396853 38396720 ID=MsG0180002439.01.T01:cds;Parent=MsG0180002439.01.T01
Chr1 CDS 38399565 38399734 38399565 ID=MsG0180002439.01.T01:cds;Parent=MsG0180002439.01.T01
Chr1 CDS 38401270 38403641 38401270 ID=MsG0180002439.01.T01:cds;Parent=MsG0180002439.01.T01
Chr1 three_prime_UTR 38403642 38403794 38403642 ID=MsG0180002439.01.T01:three_prime_utr;Parent=MsG0180002439.01.T01
Gene Sequence

>MsG0180002439.01.T01

ATGAATTCGTTCCCGGGCCTTGTACACACCGCCCGTCACACTATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGAATTCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCAAAACAAGTTCTTCTGCACCTCCGTCAAGCCTTCCTCCGTCCGATCGTCCACCACCACATCCACCACCTTTGTATCTTGCTATTATGGATGTAATCTCAATCATTGAAACATCAATTGAGCTTCCCTCTCGAAAGCCACTATGGTATTCCTGTTACTGGGCTATTCCATCATCGCTGGGGATTCATGTGATCATGGATTTAAAACCAAAGAGAAGAAGTGTTGCGGAGAATGGTGATGGTGGGGAGGATTTGTCCCTTGCAAATGGGAATGATGTTGGTCCTCTTGTTAGGCATGCCTTTGAAATGGGACGGCCAGAGGGGCTTCTTCGCCAGATGAGTTTTGTGGTTAAGGAAAAGGAAGCTGAAATCGAGGAGATGTGCAAGACTCATTACGAGGAGTTCATCCTTGCTGTCGATGAGCTTCGTGGAGTGTTGTTTGATGCTGAAGAGTTAAAGAGTCAACTTCATGGCGACAATTTTAAGTTACAGCAGGTTGGCAGTGACCTTCTTGTCAAGCTTGAAGAGCTTCTTGAGTGTTATTCTGTTAAGAAGAATGTGGCTGAAGCTGTAAAAATGTCCAAGAAGTGTGTTGAGGTGTTAGAGCTTTGCGGAAAGTGTAACAGTCAAGTTTCTGAAGGCCAGTTTTATTCCGCATTGAAAACTGTGGATTTGCTTGAGAAAAGTTACCTTCACAGTATTCCTCTGAAGGCTCTCAAAGTGGCCGTAGAGAGAAGAATTCCTGTAATAAAATTGCACATTGAGAAGAATGTTTGCGGTCAAGTTAACGAATGGATGGTTCAAATAAGGAGTTCTGCTAGAAATATCGGGCAAACAGCAATTGGCCGTATTGCAACAGTTCGTCAAAGGGATGACGAGATGCTAGAACAGCAGAGAAAGGCTGAGGAACAATATATTTCAGGAGCAGGGAGTCTCGCCTACACTTTGGATGCCGAAGAATTTGACGAAGATTCTGTTATCAAGTTTGATCTTACACCTCTTTATCGTGCTTGTCATATTCATGATTTTCTAGGAATCCGAGAGAAGTTTCGTGAATACTACTATACTAACAGATTGTTACAACTGAATTCCGACCTTGAAATATCTTCAGCACAACCTTTTGTTGAATCTTACCAGACATTTTTTGCTCAAATTGCTGGTTTCTTTATGGTTGAGGATAGAGTCCTCAGAACTGCTGGGGTCCTCCTGGTAGCTGATCAAGTTGAAACAATGTGGGAGACAGCTGTGGCTAAAATGACATCTGTGTTAGAGGAGCAGTTCTCCTCTATGGAGTCGGCCACACATCTTCTCCTGGTGAAGGATTATGTCACTCTGTTTGGGGCTACTCTTAGACAATATGGGCATGACATTGGCACACTTCTTGATGTGCTAGATAGCAGCCATGAGAAGTACCACCAGCTTCTGTTGGAAGAATGCCGGCAACAAACTGTTGATGTTCTCGGCAATGACTCATATGACCAAGTGTCGATAAAAAAGGAATCTGACTATGAGAATGTTGTTCTTTCATTTCATCTTCAAACATCAGATATTATGCCTGCTTTTCCATATGTTGCACCATTCTCCTCCATGGTACCTGATGTGTGTCGCATTGTGAGATCCTTTATCAAAGGCTCTGTTGATTACTTATCTCATGGTATTGGTATGCATATGAATGTCTTTGATGTTGTGAGGAAGTATTTGGACAAGTTCCTTATTGACGTATTGAATGCAGTATTACTCAATACAATTAATGGTGGCAACATCGCTGTAACTCAAGTTATGCAGATTGCTACAAACATAGCTGTCCTTGAAAGAGCCTGTGATTTTTTCCTTCGACAAGCAGCCCAACTATGTGGCATCCCTTGCCGATCAATTGAAAGGCCTCAGCCAGATTTAAGTGCAAAGGTGATCTTGAAAACGTCGAGGGACGCAGCTTACAGTGGCCTATTGAACATGGTAAACAAAGAAATAGACAAGTTTATGACTGCCGGTGTTAATTGGACTCCTGAGGAGACAAATCAGAATGGAAATGACTACATACATGAAGTGATCATTTACCTTCATTCTATTTTAAAGCCAGCACAACAAATTTTACCCCTGGATGCCATGCACAGAGTTGGGAGTGGTGTTTTTGAGCATATTTCCAGTTCTCTAGTGGCTGCTTTCTCTAGTGATAGTGTCAAAAGGTTTAATGCAAATGCTGTTATAAACATCGAATATGATCTTCAGATCATAGAAAATTTTGCAGATGAACAGTTCTATTCTGCTGGTCTGGGAGAAATTTACAATGAAGGTAGTTTTAAGAATTGCTTGGTAGAAGCAAGGCAGTTGGTTAATCTTTTGCTAAGTAGTCAAGCTGAGAACTTCATGAATCCTGGTATAAGGGAGAAAAGTTACTATGCATTGGATTACAAGAAGGTTTCTGCCATCTGTGATAAATTCAAGGATTCTCCAGATGGGATATTTGGAAGCCTTGCTAATAAAAATGCTAAGCAAAGTGCTAGAAAGAAATCAATGGACGTGCTCAAAAAGCGGCTTAAGGATTTCAGTTGA
Protein sequence

>MsG0180002439.01.T01

MNSFPGLVHTARHTMGAGHARSRYLNRKEGNSEGRASDWSEVKTSSSAPPSSLPPSDRPPPHPPPLYLAIMDVISIIETSIELPSRKPLWYSCYWAIPSSLGIHVIMDLKPKRRSVAENGDGGEDLSLANGNDVGPLVRHAFEMGRPEGLLRQMSFVVKEKEAEIEEMCKTHYEEFILAVDELRGVLFDAEELKSQLHGDNFKLQQVGSDLLVKLEELLECYSVKKNVAEAVKMSKKCVEVLELCGKCNSQVSEGQFYSALKTVDLLEKSYLHSIPLKALKVAVERRIPVIKLHIEKNVCGQVNEWMVQIRSSARNIGQTAIGRIATVRQRDDEMLEQQRKAEEQYISGAGSLAYTLDAEEFDEDSVIKFDLTPLYRACHIHDFLGIREKFREYYYTNRLLQLNSDLEISSAQPFVESYQTFFAQIAGFFMVEDRVLRTAGVLLVADQVETMWETAVAKMTSVLEEQFSSMESATHLLLVKDYVTLFGATLRQYGHDIGTLLDVLDSSHEKYHQLLLEECRQQTVDVLGNDSYDQVSIKKESDYENVVLSFHLQTSDIMPAFPYVAPFSSMVPDVCRIVRSFIKGSVDYLSHGIGMHMNVFDVVRKYLDKFLIDVLNAVLLNTINGGNIAVTQVMQIATNIAVLERACDFFLRQAAQLCGIPCRSIERPQPDLSAKVILKTSRDAAYSGLLNMVNKEIDKFMTAGVNWTPEETNQNGNDYIHEVIIYLHSILKPAQQILPLDAMHRVGSGVFEHISSSLVAAFSSDSVKRFNANAVINIEYDLQIIENFADEQFYSAGLGEIYNEGSFKNCLVEARQLVNLLLSSQAENFMNPGIREKSYYALDYKKVSAICDKFKDSPDGIFGSLANKNAKQSARKKSMDVLKKRLKDFS*