AlfalfaGEDB | MsG0380013892.01

M. sativa cultivar ZhongmuNo.1 / MsG0380013892.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013892.01.T01	KAG4204298.1	98.78	82	1	0	1	82	1	82	1.28E-52	168

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013892.01.T01	Q3BAI2	97.561	82	2	0	1	82	10	91	2.41E-55	168

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013892.01.T01	A0A2I0V9T3	98.780	82	1	0	1	82	1	82	6.12e-53	168
MsG0380013892.01.T01	A0A5N6N5S8	98.780	82	1	0	1	82	311	392	3.40e-50	173

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047967.01	MsG0380013892.01	0.818973	1.481848e-52	1.125877e-49
MsG0080048633.01	MsG0380013892.01	-0.818625	1.778063e-52	1.337758e-49
MsG0080048652.01	MsG0380013892.01	-0.836052	1.173245e-56	1.461475e-53
MsG0080048691.01	MsG0380013892.01	0.807555	4.772636e-50	2.666348e-47
MsG0080048692.01	MsG0380013892.01	0.890698	7.787041e-74	6.619954e-70
MsG0080048693.01	MsG0380013892.01	0.861816	7.864952e-64	2.253623e-60
MsG0080048694.01	MsG0380013892.01	0.915476	5.624778e-85	1.471855e-80
MsG0080048695.01	MsG0380013892.01	0.914750	1.329010e-84	3.356232e-80
MsG0080048697.01	MsG0380013892.01	0.874559	6.144044e-68	2.777668e-64
MsG0080048698.01	MsG0380013892.01	0.817075	3.980103e-52	2.869821e-49
MsG0080048699.01	MsG0380013892.01	0.852968	3.258075e-61	6.928321e-58
MsG0080048948.01	MsG0380013892.01	0.822665	2.098113e-53	1.767511e-50
MsG0080049019.01	MsG0380013892.01	0.810370	1.192355e-50	7.174303e-48
MsG0080049076.01	MsG0380013892.01	0.893014	9.316144e-75	8.723772e-71
MsG0180001072.01	MsG0380013892.01	0.811137	8.137622e-51	4.997411e-48
MsG0180001108.01	MsG0380013892.01	-0.801089	1.061438e-48	5.024918e-46
MsG0180001507.01	MsG0380013892.01	0.897561	1.247561e-76	1.417608e-72
MsG0180001925.01	MsG0380013892.01	0.854331	1.321550e-61	2.940973e-58
MsG0180002099.01	MsG0380013892.01	0.813410	2.595845e-51	1.693968e-48
MsG0180002214.01	MsG0380013892.01	0.818394	2.005794e-52	1.499675e-49
MsG0180002439.01	MsG0380013892.01	0.954812	1.269710e-112	3.680954e-107
MsG0180002546.01	MsG0380013892.01	0.829102	6.211551e-55	6.294666e-52
MsG0180004124.01	MsG0380013892.01	0.843475	1.369929e-58	2.145834e-55
MsG0180004125.01	MsG0380013892.01	0.838258	3.199939e-57	4.262060e-54
MsG0180004186.01	MsG0380013892.01	-0.824794	6.652825e-54	5.954198e-51
MsG0180004226.01	MsG0380013892.01	0.813634	2.317269e-51	1.521343e-48
MsG0180004300.01	MsG0380013892.01	-0.836400	9.566511e-57	1.204210e-53
MsG0180004507.01	MsG0380013892.01	0.810952	8.925111e-51	5.454818e-48
MsG0180004553.01	MsG0380013892.01	0.817983	2.484185e-52	1.836270e-49
MsG0180004559.01	MsG0380013892.01	-0.805628	1.217676e-49	6.473785e-47
MsG0180004586.01	MsG0380013892.01	0.841153	5.648644e-58	8.226073e-55
MsG0180004761.01	MsG0380013892.01	0.845572	3.736149e-59	6.252890e-56
MsG0180005791.01	MsG0380013892.01	0.824736	6.866225e-54	6.134907e-51
MsG0180006226.01	MsG0380013892.01	0.800695	1.277591e-48	5.987542e-46
MsG0280010695.01	MsG0380013892.01	0.843534	1.320942e-58	2.072937e-55
MsG0380013448.01	MsG0380013892.01	0.818111	2.324888e-52	1.724599e-49
MsG0380013888.01	MsG0380013892.01	0.807826	4.181098e-50	2.352411e-47
MsG0380013890.01	MsG0380013892.01	0.920685	9.349576e-88	3.213072e-83
MsG0380013891.01	MsG0380013892.01	0.878802	2.090201e-69	1.106197e-65
MsG0380013892.01	MsG0380013921.01	0.833908	4.070014e-56	4.754243e-53
MsG0380013892.01	MsG0380013925.01	0.815430	9.280686e-52	6.397279e-49
MsG0380013892.01	MsG0380013926.01	0.828398	9.192174e-55	9.126440e-52
MsG0380013892.01	MsG0380013928.01	0.901191	3.439943e-78	4.595791e-74
MsG0380013892.01	MsG0380013929.01	0.810641	1.042110e-50	6.315868e-48
MsG0380013892.01	MsG0380013931.01	0.804372	2.229288e-49	1.147509e-46
MsG0380013892.01	MsG0380013934.01	0.802544	5.334116e-49	2.619998e-46
MsG0380013892.01	MsG0380013940.01	0.904749	8.865082e-80	1.390697e-75
MsG0380013892.01	MsG0380013941.01	0.823154	1.614013e-53	1.378621e-50
MsG0380013892.01	MsG0380013942.01	0.857528	1.535429e-62	3.801126e-59
MsG0380013892.01	MsG0380013943.01	0.905962	2.464668e-80	4.086406e-76
MsG0380013892.01	MsG0380013945.01	0.890140	1.289168e-73	1.070714e-69
MsG0380013892.01	MsG0380013951.01	0.840842	6.813437e-58	9.828033e-55
MsG0380013892.01	MsG0380013953.01	0.901470	2.593611e-78	3.509501e-74
MsG0380013892.01	MsG0380013954.01	0.856227	3.709446e-62	8.791358e-59
MsG0380013892.01	MsG0380013956.01	0.856953	2.269164e-62	5.509370e-59
MsG0380013892.01	MsG0380013957.01	0.896033	5.436920e-76	5.778061e-72
MsG0380013892.01	MsG0380013961.01	0.829137	6.091716e-55	6.179695e-52
MsG0380013892.01	MsG0380013962.01	0.835609	1.519278e-56	1.867313e-53
MsG0380013892.01	MsG0380013966.01	0.876943	9.334336e-69	4.610254e-65
MsG0380013892.01	MsG0380013967.01	0.895512	8.935783e-76	9.300332e-72
MsG0380013892.01	MsG0380013968.01	0.842030	3.315986e-58	4.963305e-55
MsG0380013892.01	MsG0380013969.01	0.800944	1.136403e-48	5.359944e-46
MsG0380013892.01	MsG0380013971.01	0.882121	1.358236e-70	8.172033e-67
MsG0380013892.01	MsG0380013975.01	0.883428	4.523226e-71	2.866157e-67
MsG0380013892.01	MsG0380013977.01	0.893024	9.231930e-75	8.648367e-71
MsG0380013892.01	MsG0380013984.01	0.892286	1.826685e-74	1.658406e-70
MsG0380013892.01	MsG0380013985.01	0.906343	1.642141e-80	2.769880e-76
MsG0380013892.01	MsG0380013986.01	0.971937	5.898699e-134	6.672376e-128
MsG0380013892.01	MsG0380013997.01	0.965773	4.841995e-125	3.156013e-119
MsG0380013892.01	MsG0380013999.01	0.831860	1.313592e-55	1.443641e-52
MsG0380013892.01	MsG0380014005.01	0.882305	1.164262e-70	7.056670e-67
MsG0380013892.01	MsG0380014006.01	0.905766	3.033033e-80	4.978365e-76
MsG0380013892.01	MsG0380014016.01	0.951206	3.326728e-109	7.464030e-104
MsG0380013892.01	MsG0380014017.01	0.841584	4.349705e-58	6.420523e-55
MsG0380013892.01	MsG0380014018.01	0.844028	9.741631e-59	1.552774e-55
MsG0380013892.01	MsG0380014020.01	0.835597	1.530004e-56	1.879794e-53
MsG0380013892.01	MsG0380014021.01	0.835440	1.676238e-56	2.049888e-53
MsG0380013892.01	MsG0380014023.01	0.855112	7.846691e-62	1.791816e-58
MsG0380013892.01	MsG0380014024.01	0.844423	7.628870e-59	1.231068e-55
MsG0380013892.01	MsG0380014026.01	0.851635	7.805691e-61	1.589903e-57
MsG0380013892.01	MsG0380014029.01	0.909225	7.208413e-82	1.388001e-77
MsG0380013892.01	MsG0380014031.01	0.802791	4.744024e-49	2.344954e-46
MsG0380013892.01	MsG0380014032.01	0.886086	4.643759e-72	3.269558e-68
MsG0380013892.01	MsG0380014033.01	0.876918	9.523951e-69	4.700286e-65
MsG0380013892.01	MsG0380014051.01	0.838194	3.324199e-57	4.419062e-54
MsG0380013892.01	MsG0380014057.01	0.822385	2.436799e-53	2.036683e-50
MsG0380013892.01	MsG0380014410.01	-0.821092	4.851749e-53	3.909561e-50
MsG0380013892.01	MsG0380014754.01	-0.815059	1.122404e-51	7.658255e-49
MsG0380013892.01	MsG0380015348.01	0.814581	1.432025e-51	9.646074e-49
MsG0380013892.01	MsG0380015985.01	0.819114	1.376684e-52	1.049917e-49
MsG0380013892.01	MsG0380016008.01	-0.836894	7.160399e-57	9.148572e-54
MsG0380013892.01	MsG0380016018.01	-0.825663	4.144972e-54	3.802486e-51
MsG0380013892.01	MsG0380016424.01	0.805372	1.377860e-49	7.277263e-47
MsG0380013892.01	MsG0380016790.01	0.805253	1.459726e-49	7.685681e-47
MsG0380013892.01	MsG0380016931.01	0.800202	1.609590e-48	7.449790e-46
MsG0380013892.01	MsG0380016934.01	0.809162	2.168390e-50	1.263808e-47
MsG0380013892.01	MsG0380016935.01	0.821349	4.234110e-53	3.436144e-50
MsG0380013892.01	MsG0380017007.01	0.834682	2.601944e-56	3.110063e-53
MsG0380013892.01	MsG0380017231.01	-0.829846	4.096145e-55	4.243245e-52
MsG0380013892.01	MsG0380017405.01	0.823390	1.421248e-53	1.221941e-50
MsG0380013892.01	MsG0380017406.01	0.827590	1.438098e-54	1.394351e-51
MsG0380013892.01	MsG0380017962.01	0.805143	1.538904e-49	8.080271e-47
MsG0380013892.01	MsG0480018296.01	0.855572	5.766224e-62	1.337139e-58
MsG0380013892.01	MsG0480018788.01	0.817894	2.602466e-52	1.919054e-49
MsG0380013892.01	MsG0480019028.01	0.957729	1.341323e-115	4.739440e-110
MsG0380013892.01	MsG0480019038.01	-0.803190	3.923357e-49	1.959104e-46
MsG0380013892.01	MsG0480020051.01	0.892626	1.334236e-74	1.229666e-70
MsG0380013892.01	MsG0480020052.01	0.950202	2.676631e-108	5.614463e-103
MsG0380013892.01	MsG0480021205.01	0.801164	1.024293e-48	4.858121e-46
MsG0380013892.01	MsG0480021331.01	0.813700	2.241615e-51	1.474310e-48
MsG0380013892.01	MsG0480021912.01	0.815687	8.135427e-52	5.647633e-49
MsG0380013892.01	MsG0480022459.01	0.813799	2.131619e-51	1.405726e-48
MsG0380013892.01	MsG0480022591.01	0.808398	3.159217e-50	1.804501e-47
MsG0380013892.01	MsG0480023195.01	-0.854938	8.817723e-62	2.002074e-58
MsG0380013892.01	MsG0480023324.01	-0.807928	3.977863e-50	2.243943e-47
MsG0380013892.01	MsG0580024442.01	0.817970	2.501222e-52	1.848206e-49
MsG0380013892.01	MsG0580024493.01	0.805217	1.484736e-49	7.810620e-47
MsG0380013892.01	MsG0580024570.01	0.837883	3.996829e-57	5.263538e-54
MsG0380013892.01	MsG0580025105.01	0.813663	2.283500e-51	1.500374e-48
MsG0380013892.01	MsG0580025486.01	0.802506	5.432423e-49	2.665663e-46
MsG0380013892.01	MsG0580025572.01	-0.807720	4.403421e-50	2.470714e-47
MsG0380013892.01	MsG0580025573.01	-0.800015	1.757283e-48	8.094843e-46
MsG0380013892.01	MsG0580025620.01	-0.826315	2.902744e-54	2.712720e-51
MsG0380013892.01	MsG0580025822.01	-0.801547	8.550706e-49	4.094733e-46
MsG0380013892.01	MsG0580027641.01	-0.856269	3.605767e-62	8.557542e-59
MsG0380013892.01	MsG0580027677.01	0.900068	1.059576e-77	1.347416e-73
MsG0380013892.01	MsG0580029583.01	-0.811239	7.734085e-51	4.762298e-48
MsG0380013892.01	MsG0580029792.01	0.801316	9.538833e-49	4.541388e-46
MsG0380013892.01	MsG0680030439.01	0.845980	2.894698e-59	4.909723e-56
MsG0380013892.01	MsG0680030545.01	-0.818830	1.596889e-52	1.208372e-49
MsG0380013892.01	MsG0680030635.01	0.815861	7.441021e-52	5.189852e-49
MsG0380013892.01	MsG0680030961.01	-0.828074	1.100266e-54	1.082122e-51
MsG0380013892.01	MsG0680031178.01	-0.801835	7.466248e-49	3.601570e-46
MsG0380013892.01	MsG0680031813.01	0.811934	5.460665e-51	3.424720e-48
MsG0380013892.01	MsG0680035870.01	0.804569	2.028668e-49	1.049510e-46
MsG0380013892.01	MsG0780036068.01	0.815545	8.749053e-52	6.049921e-49
MsG0380013892.01	MsG0780038047.01	0.821571	3.762008e-53	3.071981e-50
MsG0380013892.01	MsG0780038197.01	0.846293	2.378383e-59	4.074351e-56
MsG0380013892.01	MsG0780038198.01	0.810119	1.350663e-50	8.073909e-48
MsG0380013892.01	MsG0780038810.01	-0.835188	1.940200e-56	2.354892e-53
MsG0380013892.01	MsG0780039821.01	0.812432	4.253193e-51	2.703933e-48
MsG0380013892.01	MsG0780039838.01	0.810317	1.224108e-50	7.355037e-48
MsG0380013892.01	MsG0780040060.01	-0.811333	7.380013e-51	4.555326e-48
MsG0380013892.01	MsG0780040121.01	0.813879	2.047230e-51	1.353023e-48
MsG0380013892.01	MsG0780040878.01	-0.812441	4.232737e-51	2.691689e-48
MsG0380013892.01	MsG0780041079.01	-0.811743	6.009292e-51	3.749871e-48
MsG0380013892.01	MsG0780041637.01	0.803608	3.214475e-49	1.622433e-46
MsG0380013892.01	MsG0780041720.01	0.803875	2.829301e-49	1.437905e-46
MsG0380013892.01	MsG0780041783.01	0.814744	1.317972e-51	8.916771e-49
MsG0380013892.01	MsG0880042291.01	0.858402	8.445466e-63	2.152803e-59
MsG0380013892.01	MsG0880043069.01	0.801731	7.839761e-49	3.771699e-46
MsG0380013892.01	MsG0880043948.01	-0.817292	3.557223e-52	2.580110e-49
MsG0380013892.01	MsG0880043983.01	-0.871545	6.299339e-67	2.550923e-63
MsG0380013892.01	MsG0880044688.01	-0.810904	9.140640e-51	5.579111e-48
MsG0380013892.01	MsG0880045097.01	0.802309	5.962899e-49	2.911542e-46
MsG0380013892.01	MsG0880045273.01	0.810955	8.909032e-51	5.445402e-48
MsG0380013892.01	MsG0880045274.01	0.826618	2.457303e-54	2.316346e-51
MsG0380013892.01	MsG0880045385.01	0.812789	3.552082e-51	2.279297e-48
MsG0380013892.01	MsG0880045630.01	0.853229	2.742932e-61	5.885705e-58
MsG0380013892.01	MsG0880046150.01	0.812238	4.687647e-51	2.964595e-48
MsG0380013892.01	MsG0880046167.01	0.800991	1.111628e-48	5.249552e-46
MsG0380013892.01	MsG0880046174.01	0.804299	2.308814e-49	1.186189e-46
MsG0380013892.01	MsG0880046219.01	0.814449	1.531822e-51	1.028146e-48
MsG0380013892.01	MsG0880046469.01	0.806671	7.345920e-50	4.010758e-47
MsG0380013892.01	MsG0880047318.01	0.804779	1.833463e-49	9.537406e-47
MsG0280007233.01	MsG0380013892.01	0.809054	2.287288e-50	1.329216e-47
MsG0280007759.01	MsG0380013892.01	-0.807767	4.303617e-50	2.417621e-47
MsG0280007760.01	MsG0380013892.01	-0.807558	4.767775e-50	2.663753e-47
MsG0280007786.01	MsG0380013892.01	-0.816332	5.841710e-52	4.127515e-49
MsG0280008820.01	MsG0380013892.01	0.816507	5.336191e-52	3.788140e-49
MsG0280009541.01	MsG0380013892.01	0.809973	1.451858e-50	8.645766e-48
MsG0280009742.01	MsG0380013892.01	0.816930	4.288877e-52	3.080315e-49
MsG0280009864.01	MsG0380013892.01	0.801942	7.097626e-49	3.432964e-46
MsG0280009971.01	MsG0380013892.01	-0.805806	1.117481e-49	5.968347e-47
MsG0280010142.01	MsG0380013892.01	0.908857	1.080846e-81	2.046490e-77
MsG0280010143.01	MsG0380013892.01	0.853797	1.884001e-61	4.119599e-58
MsG0280010144.01	MsG0380013892.01	0.843429	1.409339e-58	2.204481e-55
MsG0280010145.01	MsG0380013892.01	0.850085	2.132760e-60	4.129842e-57

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013892.01.T01	MTR_4g451295	100.000	82	0	0	1	82	221	302	5.31e-55	172
MsG0380013892.01.T01	MTR_5g080940	97.531	81	2	0	1	81	291	371	1.77e-50	164
MsG0380013892.01.T01	MTR_4g006070	100.000	64	0	0	18	81	235	298	9.19e-40	134
MsG0380013892.01.T01	MTR_1g039020	94.545	55	3	0	28	82	8	62	4.38e-33	108
MsG0380013892.01.T01	MTR_4g076920	100.000	46	0	0	20	65	132	177	1.11e-26	97.4
MsG0380013892.01.T01	MTR_4g122520	60.417	48	17	1	36	81	5	52	3.72e-13	58.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 41 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCACGAAAGGCGTAACGATC+TGG	0.311741	3:+47530003	None:intergenic
CACCAACTTCCTTAACCTTC+CGG	0.362818	3:-47529878	MsG0380013892.01.T01:CDS
TTCACCGGGGCTTCGGTCGC+CGG	0.371598	3:-47529918	MsG0380013892.01.T01:CDS
CAAAGTCGTAAGACCATGTA+TGG	0.380055	3:+47529835	None:intergenic
GCCGCCGTTCACCGGGGCTT+CGG	0.397671	3:-47529925	MsG0380013892.01.T01:CDS
TGCCCAGTGCCGGAAGGTTA+AGG	0.409134	3:+47529869	None:intergenic
CTTCCTTAACCTTCCGGCAC+TGG	0.422146	3:-47529872	MsG0380013892.01.T01:CDS
TAGTTACGGCCGCCGTTCAC+CGG	0.432611	3:-47529933	MsG0380013892.01.T01:CDS
GGCTGACGCCTGCCCAGTGC+CGG	0.435469	3:+47529859	None:intergenic
TTAACCTTCCGGCACTGGGC+AGG	0.436659	3:-47529867	MsG0380013892.01.T01:CDS
AGTTACGGCCGCCGTTCACC+GGG	0.437053	3:-47529932	MsG0380013892.01.T01:CDS
TCGCCGGCTTCCCTGTCATC+AGG	0.453580	3:-47529902	MsG0380013892.01.T01:CDS
GAAGCCGGCGACCGAAGCCC+CGG	0.461073	3:+47529914	None:intergenic
TACATGGTCTTACGACTTTG+CGG	0.476001	3:-47529832	MsG0380013892.01.T01:CDS
TGCCGGAAGGTTAAGGAAGT+TGG	0.485164	3:+47529876	None:intergenic
ACAAGGAATTTCGCTACCTT+AGG	0.488888	3:-47529963	MsG0380013892.01.T01:CDS
CACGAAAGGCGTAACGATCT+GGG	0.491297	3:+47530004	None:intergenic
GAAGTTGGTGACCTGATGAC+AGG	0.495416	3:+47529891	None:intergenic
AGGTAGCGAAATTCCTTGTC+GGG	0.495901	3:+47529967	None:intergenic
TTCCTTAACCTTCCGGCACT+GGG	0.504342	3:-47529871	MsG0380013892.01.T01:CDS
GCGACCGAAGCCCCGGTGAA+CGG	0.505900	3:+47529921	None:intergenic
CACTGTCTCGGAGAGAGGCT+CGG	0.506062	3:+47530027	None:intergenic
AAGGTAGCGAAATTCCTTGT+CGG	0.511527	3:+47529966	None:intergenic
TAACGATCTGGGCACTGTCT+CGG	0.513539	3:+47530015	None:intergenic
GATCGTTACGCCTTTCGTGC+GGG	0.516913	3:-47530000	MsG0380013892.01.T01:CDS
TGACCTGATGACAGGGAAGC+CGG	0.518242	3:+47529899	None:intergenic
CCTTAGGACCGTTATAGTTA+CGG	0.519214	3:-47529947	MsG0380013892.01.T01:CDS
CTGGGCACTGTCTCGGAGAG+AGG	0.542198	3:+47530022	None:intergenic
AAAGTCGTAAGACCATGTAT+GGG	0.556989	3:+47529836	None:intergenic
ACCGAAGCCCCGGTGAACGG+CGG	0.564471	3:+47529924	None:intergenic
AGATCGTTACGCCTTTCGTG+CGG	0.565799	3:-47530001	MsG0380013892.01.T01:CDS
GACGCCTGCCCAGTGCCGGA+AGG	0.568365	3:+47529863	None:intergenic
CCGTAACTATAACGGTCCTA+AGG	0.574485	3:+47529947	None:intergenic
TAAGTTCCGACCCGCACGAA+AGG	0.581321	3:+47529990	None:intergenic
AACGGCGGCCGTAACTATAA+CGG	0.599287	3:+47529939	None:intergenic
GTTACGCCTTTCGTGCGGGT+CGG	0.605304	3:-47529996	MsG0380013892.01.T01:CDS
AAGTCGTAAGACCATGTATG+GGG	0.621859	3:+47529837	None:intergenic
AAGTTGGTGACCTGATGACA+GGG	0.627282	3:+47529892	None:intergenic
GGGTCGGAACTTACCCGACA+AGG	0.655880	3:-47529980	MsG0380013892.01.T01:CDS
AGTCGTAAGACCATGTATGG+GGG	0.686647	3:+47529838	None:intergenic
GTTACGGCCGCCGTTCACCG+GGG	0.732311	3:-47529931	MsG0380013892.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAAGTCGTAAGACCATGTAT+GGG	+	Chr3:47530019-47530038	None:intergenic	35.0%
	AAGGTAGCGAAATTCCTTGT+CGG	+	Chr3:47529889-47529908	None:intergenic	40.0%
	AAGTCGTAAGACCATGTATG+GGG	+	Chr3:47530018-47530037	None:intergenic	40.0%
	ACAAGGAATTTCGCTACCTT+AGG	-	Chr3:47529889-47529908	MsG0380013892.01.T01:CDS	40.0%
	CAAAGTCGTAAGACCATGTA+TGG	+	Chr3:47530020-47530039	None:intergenic	40.0%
	CCTTAGGACCGTTATAGTTA+CGG	-	Chr3:47529905-47529924	MsG0380013892.01.T01:CDS	40.0%
!	TACATGGTCTTACGACTTTG+CGG	-	Chr3:47530020-47530039	MsG0380013892.01.T01:CDS	40.0%
	AGGTAGCGAAATTCCTTGTC+GGG	+	Chr3:47529888-47529907	None:intergenic	45.0%
	AGTCGTAAGACCATGTATGG+GGG	+	Chr3:47530017-47530036	None:intergenic	45.0%
	CACCAACTTCCTTAACCTTC+CGG	-	Chr3:47529974-47529993	MsG0380013892.01.T01:CDS	45.0%
	CCGTAACTATAACGGTCCTA+AGG	+	Chr3:47529908-47529927	None:intergenic	45.0%
!	TTTGCGGAGACCTGTGTTTT+TGG	-	Chr3:47530036-47530055	MsG0380013892.01.T01:CDS	45.0%
!!	AAGTTGGTGACCTGATGACA+GGG	+	Chr3:47529963-47529982	None:intergenic	45.0%
	AACGGCGGCCGTAACTATAA+CGG	+	Chr3:47529916-47529935	None:intergenic	50.0%
	AGATCGTTACGCCTTTCGTG+CGG	-	Chr3:47529851-47529870	MsG0380013892.01.T01:CDS	50.0%
	TGCCGGAAGGTTAAGGAAGT+TGG	+	Chr3:47529979-47529998	None:intergenic	50.0%
	TTCCTTAACCTTCCGGCACT+GGG	-	Chr3:47529981-47530000	MsG0380013892.01.T01:CDS	50.0%
!	CACGAAAGGCGTAACGATCT+GGG	+	Chr3:47529851-47529870	None:intergenic	50.0%
!	TAACGATCTGGGCACTGTCT+CGG	+	Chr3:47529840-47529859	None:intergenic	50.0%
!!	GAAGTTGGTGACCTGATGAC+AGG	+	Chr3:47529964-47529983	None:intergenic	50.0%
	CTTCCTTAACCTTCCGGCAC+TGG	-	Chr3:47529980-47529999	MsG0380013892.01.T01:CDS	55.0%
	GATCGTTACGCCTTTCGTGC+GGG	-	Chr3:47529852-47529871	MsG0380013892.01.T01:CDS	55.0%
	TAAGTTCCGACCCGCACGAA+AGG	+	Chr3:47529865-47529884	None:intergenic	55.0%
	TGACCTGATGACAGGGAAGC+CGG	+	Chr3:47529956-47529975	None:intergenic	55.0%
!	GCACGAAAGGCGTAACGATC+TGG	+	Chr3:47529852-47529871	None:intergenic	55.0%
	CACTGTCTCGGAGAGAGGCT+CGG	+	Chr3:47529828-47529847	None:intergenic	60.0%
	GGGTCGGAACTTACCCGACA+AGG	-	Chr3:47529872-47529891	MsG0380013892.01.T01:CDS	60.0%
	GTTACGCCTTTCGTGCGGGT+CGG	-	Chr3:47529856-47529875	MsG0380013892.01.T01:CDS	60.0%
	TAGTTACGGCCGCCGTTCAC+CGG	-	Chr3:47529919-47529938	MsG0380013892.01.T01:CDS	60.0%
!	TGCCCAGTGCCGGAAGGTTA+AGG	+	Chr3:47529986-47530005	None:intergenic	60.0%
!	TTAACCTTCCGGCACTGGGC+AGG	-	Chr3:47529985-47530004	MsG0380013892.01.T01:CDS	60.0%
	AGTTACGGCCGCCGTTCACC+GGG	-	Chr3:47529920-47529939	MsG0380013892.01.T01:CDS	65.0%
	CAGGCGTCAGCCCCCATACA+TGG	-	Chr3:47530004-47530023	MsG0380013892.01.T01:CDS	65.0%
!	CTGGGCACTGTCTCGGAGAG+AGG	+	Chr3:47529833-47529852	None:intergenic	65.0%
!!	TCGCCGGCTTCCCTGTCATC+AGG	-	Chr3:47529950-47529969	MsG0380013892.01.T01:CDS	65.0%
	ACCGAAGCCCCGGTGAACGG+CGG	+	Chr3:47529931-47529950	None:intergenic	70.0%
	GCGACCGAAGCCCCGGTGAA+CGG	+	Chr3:47529934-47529953	None:intergenic	70.0%
	GTTACGGCCGCCGTTCACCG+GGG	-	Chr3:47529921-47529940	MsG0380013892.01.T01:CDS	70.0%
	TTCACCGGGGCTTCGGTCGC+CGG	-	Chr3:47529934-47529953	MsG0380013892.01.T01:CDS	70.0%
	GAAGCCGGCGACCGAAGCCC+CGG	+	Chr3:47529941-47529960	None:intergenic	75.0%
	GCCGCCGTTCACCGGGGCTT+CGG	-	Chr3:47529927-47529946	MsG0380013892.01.T01:CDS	75.0%
	GGCTGACGCCTGCCCAGTGC+CGG	+	Chr3:47529996-47530015	None:intergenic	75.0%
!	GACGCCTGCCCAGTGCCGGA+AGG	+	Chr3:47529992-47530011	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	47529813	47530061	47529813	ID=MsG0380013892.01;Name=MsG0380013892.01
Chr3	mRNA	47529813	47530061	47529813	ID=MsG0380013892.01.T01;Parent=MsG0380013892.01;Name=MsG0380013892.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|82
Chr3	exon	47529813	47530061	47529813	ID=MsG0380013892.01.T01:exon:26403;Parent=MsG0380013892.01.T01
Chr3	CDS	47529813	47530061	47529813	ID=MsG0380013892.01.T01:cds;Parent=MsG0380013892.01.T01

Gene Sequence	>MsG0380013892.01.T01 ATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGGTCACCAACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAA
Protein sequence	>MsG0380013892.01.T01 MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLNLPALGRRQPPYMVLRLCGDLCFW*