Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036546.01.T01 | XP_013447569.1 | 91.139 | 79 | 7 | 0 | 15 | 93 | 46 | 124 | 1.51E-41 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036546.01.T01 | Q9FNR1 | 66.216 | 74 | 25 | 0 | 15 | 88 | 46 | 119 | 3.79E-30 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036546.01.T01 | A0A072U714 | 91.139 | 79 | 7 | 0 | 15 | 93 | 46 | 124 | 7.21e-42 | 150 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048135.01 | MsG0780036546.01 | 0.857208 | 1.909025e-62 | 4.675353e-59 |
| MsG0180000456.01 | MsG0780036546.01 | 0.800555 | 1.364272e-48 | 6.371248e-46 |
| MsG0180000575.01 | MsG0780036546.01 | 0.829293 | 5.581662e-55 | 5.689655e-52 |
| MsG0180000614.01 | MsG0780036546.01 | 0.871655 | 5.791744e-67 | 2.354812e-63 |
| MsG0180000615.01 | MsG0780036546.01 | 0.840517 | 8.288708e-58 | 1.183609e-54 |
| MsG0180000743.01 | MsG0780036546.01 | 0.887954 | 9.061834e-73 | 6.881223e-69 |
| MsG0180002458.01 | MsG0780036546.01 | 0.839995 | 1.134978e-57 | 1.594842e-54 |
| MsG0180003793.01 | MsG0780036546.01 | 0.816801 | 4.586246e-52 | 3.282016e-49 |
| MsG0180004130.01 | MsG0780036546.01 | 0.822386 | 2.435159e-53 | 2.035389e-50 |
| MsG0180004509.01 | MsG0780036546.01 | 0.819890 | 9.156996e-53 | 7.136224e-50 |
| MsG0180004854.01 | MsG0780036546.01 | 0.811638 | 6.333755e-51 | 3.941075e-48 |
| MsG0180005426.01 | MsG0780036546.01 | 0.808128 | 3.606004e-50 | 2.045093e-47 |
| MsG0180005851.01 | MsG0780036546.01 | 0.815658 | 8.257230e-52 | 5.727638e-49 |
| MsG0280006422.01 | MsG0780036546.01 | 0.848274 | 6.801702e-60 | 1.241655e-56 |
| MsG0280010776.01 | MsG0780036546.01 | 0.809611 | 1.737003e-50 | 1.024632e-47 |
| MsG0380011659.01 | MsG0780036546.01 | 0.852467 | 4.528680e-61 | 9.471211e-58 |
| MsG0380012073.01 | MsG0780036546.01 | 0.812726 | 3.666641e-51 | 2.349102e-48 |
| MsG0380012108.01 | MsG0780036546.01 | 0.840602 | 7.876458e-58 | 1.127616e-54 |
| MsG0380012566.01 | MsG0780036546.01 | 0.831358 | 1.746212e-55 | 1.890482e-52 |
| MsG0380013178.01 | MsG0780036546.01 | 0.807437 | 5.058086e-50 | 2.817142e-47 |
| MsG0380014647.01 | MsG0780036546.01 | 0.827565 | 1.458050e-54 | 1.412745e-51 |
| MsG0680031628.01 | MsG0780036546.01 | 0.815065 | 1.119073e-51 | 7.636817e-49 |
| MsG0680032770.01 | MsG0780036546.01 | 0.811094 | 8.313425e-51 | 5.099652e-48 |
| MsG0480021448.01 | MsG0780036546.01 | 0.829912 | 3.947895e-55 | 4.096969e-52 |
| MsG0480021451.01 | MsG0780036546.01 | 0.825731 | 3.995318e-54 | 3.672253e-51 |
| MsG0480021453.01 | MsG0780036546.01 | 0.860503 | 1.974618e-63 | 5.409521e-60 |
| MsG0480021750.01 | MsG0780036546.01 | 0.804731 | 1.876308e-49 | 9.748486e-47 |
| MsG0480021994.01 | MsG0780036546.01 | 0.807023 | 6.187333e-50 | 3.409275e-47 |
| MsG0480022795.01 | MsG0780036546.01 | 0.812581 | 3.944166e-51 | 2.517281e-48 |
| MsG0480022913.01 | MsG0780036546.01 | 0.846455 | 2.149482e-59 | 3.702125e-56 |
| MsG0480023149.01 | MsG0780036546.01 | 0.802631 | 5.120149e-49 | 2.520405e-46 |
| MsG0480023399.01 | MsG0780036546.01 | 0.851103 | 1.103389e-60 | 2.209071e-57 |
| MsG0480023771.01 | MsG0780036546.01 | 0.806661 | 7.381995e-50 | 4.029408e-47 |
| MsG0480023968.01 | MsG0780036546.01 | 0.860059 | 2.688615e-63 | 7.255428e-60 |
| MsG0580024754.01 | MsG0780036546.01 | 0.800914 | 1.152540e-48 | 5.431962e-46 |
| MsG0580025756.01 | MsG0780036546.01 | 0.805013 | 1.638142e-49 | 8.572510e-47 |
| MsG0380015027.01 | MsG0780036546.01 | 0.850511 | 1.619463e-60 | 3.179500e-57 |
| MsG0380016559.01 | MsG0780036546.01 | 0.828197 | 1.027481e-54 | 1.014170e-51 |
| MsG0380016560.01 | MsG0780036546.01 | 0.823521 | 1.324478e-53 | 1.143117e-50 |
| MsG0380016860.01 | MsG0780036546.01 | 0.806447 | 8.191328e-50 | 4.447026e-47 |
| MsG0380017382.01 | MsG0780036546.01 | 0.841584 | 4.348324e-58 | 6.418554e-55 |
| MsG0380017866.01 | MsG0780036546.01 | 0.806322 | 8.702406e-50 | 4.709455e-47 |
| MsG0480018110.01 | MsG0780036546.01 | 0.807767 | 4.304539e-50 | 2.418103e-47 |
| MsG0580027043.01 | MsG0780036546.01 | 0.819080 | 1.401059e-52 | 1.067486e-49 |
| MsG0680030285.01 | MsG0780036546.01 | 0.818317 | 2.087791e-52 | 1.557562e-49 |
| MsG0280006483.01 | MsG0780036546.01 | 0.828330 | 9.547494e-55 | 9.459437e-52 |
| MsG0280006993.01 | MsG0780036546.01 | 0.810999 | 8.716760e-51 | 5.334288e-48 |
| MsG0280010383.01 | MsG0780036546.01 | 0.855160 | 7.601065e-62 | 1.738547e-58 |
| MsG0780036546.01 | MsG0780036547.01 | 0.879622 | 1.072113e-69 | 5.853059e-66 |
| MsG0780036546.01 | MsG0780038400.01 | 0.838548 | 2.694237e-57 | 3.620747e-54 |
| MsG0780036546.01 | MsG0780039844.01 | 0.823452 | 1.374813e-53 | 1.184170e-50 |
| MsG0780036546.01 | MsG0780039848.01 | 0.817579 | 3.064980e-52 | 2.240658e-49 |
| MsG0780036546.01 | MsG0780041223.01 | 0.837845 | 4.087183e-57 | 5.376521e-54 |
| MsG0780036546.01 | MsG0780041224.01 | 0.810738 | 9.930048e-51 | 6.033882e-48 |
| MsG0780036546.01 | MsG0780041295.01 | 0.820152 | 7.976378e-53 | 6.261878e-50 |
| MsG0780036546.01 | MsG0780041462.01 | 0.815713 | 8.027304e-52 | 5.576554e-49 |
| MsG0780036546.01 | MsG0880041967.01 | 0.819401 | 1.183908e-52 | 9.100934e-50 |
| MsG0780036546.01 | MsG0880042131.01 | 0.800733 | 1.255113e-48 | 5.887907e-46 |
| MsG0780036546.01 | MsG0880046126.01 | 0.822780 | 1.972855e-53 | 1.667453e-50 |
| MsG0780036546.01 | MsG0880046575.01 | 0.839477 | 1.548309e-57 | 2.140741e-54 |
| MsG0780036546.01 | MsG0880046631.01 | 0.817725 | 2.841368e-52 | 2.085653e-49 |
| MsG0780036546.01 | MsG0880047427.01 | 0.834737 | 2.520487e-56 | 3.017612e-53 |
| MsG0780036546.01 | MsG0880047448.01 | 0.818965 | 1.488610e-52 | 1.130717e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036546.01.T01 | MTR_7g013730 | 91.139 | 79 | 7 | 0 | 15 | 93 | 46 | 124 | 1.83e-45 | 150 |
| MsG0780036546.01.T01 | MTR_4g109540 | 83.117 | 77 | 13 | 0 | 14 | 90 | 55 | 131 | 5.46e-39 | 134 |
| MsG0780036546.01.T01 | MTR_4g109540 | 82.895 | 76 | 13 | 0 | 15 | 90 | 48 | 123 | 1.76e-38 | 133 |
| MsG0780036546.01.T01 | MTR_7g013740 | 66.355 | 107 | 22 | 1 | 15 | 121 | 46 | 138 | 2.95e-35 | 121 |
| MsG0780036546.01.T01 | MTR_3g025880 | 67.089 | 79 | 26 | 0 | 15 | 93 | 50 | 128 | 7.94e-33 | 122 |
| MsG0780036546.01.T01 | MTR_3g014000 | 65.169 | 89 | 20 | 2 | 15 | 96 | 40 | 124 | 1.76e-32 | 114 |
| MsG0780036546.01.T01 | MTR_4g070080 | 54.930 | 71 | 32 | 0 | 15 | 85 | 12 | 82 | 4.95e-23 | 89.4 |
| MsG0780036546.01.T01 | MTR_4g070080 | 54.930 | 71 | 32 | 0 | 15 | 85 | 12 | 82 | 1.16e-22 | 89.4 |
| MsG0780036546.01.T01 | MTR_3g080130 | 46.053 | 76 | 41 | 0 | 15 | 90 | 42 | 117 | 5.45e-21 | 84.3 |
| MsG0780036546.01.T01 | MTR_4g070190 | 52.113 | 71 | 34 | 0 | 15 | 85 | 14 | 84 | 1.18e-20 | 84.3 |
| MsG0780036546.01.T01 | MTR_4g070140 | 49.296 | 71 | 36 | 0 | 15 | 85 | 14 | 84 | 6.12e-20 | 82.8 |
| MsG0780036546.01.T01 | MTR_3g084040 | 50.467 | 107 | 38 | 2 | 15 | 121 | 42 | 133 | 9.75e-20 | 81.3 |
| MsG0780036546.01.T01 | MTR_3g084040 | 61.017 | 59 | 22 | 1 | 15 | 73 | 42 | 99 | 4.55e-19 | 78.2 |
| MsG0780036546.01.T01 | MTR_3g075500 | 45.570 | 79 | 43 | 0 | 14 | 92 | 211 | 289 | 6.45e-19 | 82.0 |
| MsG0780036546.01.T01 | MTR_4g104470 | 46.835 | 79 | 42 | 0 | 15 | 93 | 222 | 300 | 1.88e-18 | 81.3 |
| MsG0780036546.01.T01 | MTR_7g105260 | 42.500 | 80 | 46 | 0 | 15 | 94 | 38 | 117 | 4.68e-18 | 76.6 |
| MsG0780036546.01.T01 | MTR_1g064230 | 42.683 | 82 | 47 | 0 | 12 | 93 | 199 | 280 | 2.02e-17 | 78.2 |
| MsG0780036546.01.T01 | MTR_4g081520 | 41.772 | 79 | 46 | 0 | 14 | 92 | 56 | 134 | 2.69e-16 | 72.4 |
| MsG0780036546.01.T01 | MTR_1g045510 | 45.714 | 70 | 38 | 0 | 16 | 85 | 211 | 280 | 9.41e-15 | 70.9 |
| MsG0780036546.01.T01 | MTR_1g045510 | 35.526 | 76 | 48 | 1 | 16 | 91 | 120 | 194 | 1.52e-11 | 62.0 |
| MsG0780036546.01.T01 | MTR_7g099940 | 44.000 | 75 | 42 | 0 | 14 | 88 | 40 | 114 | 1.58e-14 | 67.4 |
| MsG0780036546.01.T01 | MTR_6g477870 | 38.158 | 76 | 47 | 0 | 14 | 89 | 100 | 175 | 1.58e-14 | 68.6 |
| MsG0780036546.01.T01 | MTR_7g106440 | 50.000 | 68 | 34 | 0 | 25 | 92 | 228 | 295 | 2.98e-14 | 69.7 |
| MsG0780036546.01.T01 | MTR_5g044970 | 39.759 | 83 | 50 | 0 | 15 | 97 | 16 | 98 | 3.44e-14 | 67.4 |
| MsG0780036546.01.T01 | MTR_3g055990 | 44.595 | 74 | 39 | 1 | 15 | 88 | 12 | 83 | 5.28e-14 | 69.3 |
| MsG0780036546.01.T01 | MTR_3g055990 | 44.595 | 74 | 39 | 1 | 15 | 88 | 12 | 83 | 5.34e-14 | 69.3 |
| MsG0780036546.01.T01 | MTR_3g029580 | 43.478 | 69 | 39 | 0 | 15 | 83 | 38 | 106 | 6.83e-14 | 65.9 |
| MsG0780036546.01.T01 | MTR_4g063560 | 37.500 | 72 | 45 | 0 | 14 | 85 | 38 | 109 | 8.67e-14 | 64.7 |
| MsG0780036546.01.T01 | MTR_4g081510 | 41.892 | 74 | 43 | 0 | 15 | 88 | 50 | 123 | 7.84e-13 | 63.9 |
| MsG0780036546.01.T01 | MTR_5g097580 | 44.595 | 74 | 39 | 1 | 15 | 88 | 12 | 83 | 1.28e-12 | 65.5 |
| MsG0780036546.01.T01 | MTR_1g056520 | 40.299 | 67 | 40 | 0 | 25 | 91 | 223 | 289 | 1.35e-12 | 65.1 |
| MsG0780036546.01.T01 | MTR_5g097580 | 44.595 | 74 | 39 | 1 | 15 | 88 | 12 | 83 | 1.42e-12 | 65.5 |
| MsG0780036546.01.T01 | MTR_2g026180 | 40.541 | 74 | 42 | 1 | 15 | 88 | 10 | 81 | 2.88e-12 | 64.3 |
| MsG0780036546.01.T01 | MTR_6g477870 | 38.462 | 65 | 35 | 1 | 14 | 78 | 100 | 159 | 4.41e-12 | 61.6 |
| MsG0780036546.01.T01 | MTR_4g124940 | 40.278 | 72 | 43 | 0 | 16 | 87 | 138 | 209 | 6.21e-12 | 63.5 |
| MsG0780036546.01.T01 | MTR_3g075500 | 43.333 | 60 | 34 | 0 | 14 | 73 | 211 | 270 | 7.06e-12 | 62.8 |
| MsG0780036546.01.T01 | MTR_8g022050 | 38.889 | 72 | 44 | 0 | 16 | 87 | 154 | 225 | 9.54e-12 | 62.8 |
| MsG0780036546.01.T01 | MTR_7g117495 | 39.474 | 76 | 45 | 1 | 15 | 90 | 24 | 98 | 1.09e-11 | 62.0 |
| MsG0780036546.01.T01 | MTR_7g117495 | 39.474 | 76 | 45 | 1 | 15 | 90 | 24 | 98 | 1.57e-11 | 61.6 |
| MsG0780036546.01.T01 | MTR_1g036430 | 41.892 | 74 | 41 | 2 | 16 | 89 | 169 | 240 | 2.55e-11 | 62.0 |
| MsG0780036546.01.T01 | MTR_1g092860 | 35.366 | 82 | 52 | 1 | 15 | 96 | 198 | 278 | 2.65e-11 | 61.2 |
| MsG0780036546.01.T01 | MTR_6g004810 | 37.864 | 103 | 60 | 3 | 15 | 114 | 139 | 240 | 3.28e-11 | 61.2 |
| MsG0780036546.01.T01 | MTR_3g092490 | 34.568 | 81 | 52 | 1 | 15 | 95 | 32 | 111 | 4.41e-11 | 59.3 |
| MsG0780036546.01.T01 | MTR_4g117350 | 33.696 | 92 | 57 | 1 | 1 | 92 | 63 | 150 | 6.08e-11 | 58.5 |
| MsG0780036546.01.T01 | MTR_7g118120 | 34.211 | 76 | 50 | 0 | 15 | 90 | 110 | 185 | 6.45e-11 | 60.5 |
| MsG0780036546.01.T01 | MTR_1g073690 | 36.486 | 74 | 45 | 1 | 15 | 88 | 12 | 83 | 7.04e-11 | 60.5 |
| MsG0780036546.01.T01 | MTR_3g109090 | 37.500 | 72 | 45 | 0 | 16 | 87 | 136 | 207 | 8.06e-11 | 60.1 |
| MsG0780036546.01.T01 | MTR_3g109090 | 37.500 | 72 | 45 | 0 | 16 | 87 | 152 | 223 | 8.10e-11 | 60.1 |
| MsG0780036546.01.T01 | MTR_3g092490 | 34.568 | 81 | 52 | 1 | 15 | 95 | 32 | 111 | 9.69e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036546.01.T01 | AT1G74230 | 72.603 | 73 | 19 | 1 | 15 | 87 | 40 | 111 | 3.43e-31 | 114 |
| MsG0780036546.01.T01 | AT5G61030 | 66.216 | 74 | 25 | 0 | 15 | 88 | 46 | 119 | 3.86e-31 | 115 |
| MsG0780036546.01.T01 | AT5G61030 | 66.216 | 74 | 25 | 0 | 15 | 88 | 46 | 119 | 3.86e-31 | 115 |
| MsG0780036546.01.T01 | AT3G23830 | 57.333 | 75 | 32 | 0 | 15 | 89 | 41 | 115 | 1.32e-26 | 98.6 |
| MsG0780036546.01.T01 | AT3G23830 | 57.333 | 75 | 32 | 0 | 15 | 89 | 41 | 115 | 1.32e-26 | 98.6 |
| MsG0780036546.01.T01 | AT4G13850 | 56.000 | 75 | 33 | 0 | 15 | 89 | 41 | 115 | 5.37e-25 | 94.4 |
| MsG0780036546.01.T01 | AT4G13850 | 56.000 | 75 | 33 | 0 | 15 | 89 | 41 | 115 | 7.45e-25 | 94.4 |
| MsG0780036546.01.T01 | AT4G13850 | 56.000 | 75 | 33 | 0 | 15 | 89 | 41 | 115 | 9.44e-25 | 94.4 |
| MsG0780036546.01.T01 | AT4G13850 | 56.000 | 75 | 33 | 0 | 15 | 89 | 41 | 115 | 1.07e-24 | 94.4 |
| MsG0780036546.01.T01 | AT5G06210 | 47.727 | 88 | 46 | 0 | 15 | 102 | 40 | 127 | 7.71e-23 | 89.4 |
| MsG0780036546.01.T01 | AT4G39260 | 46.988 | 83 | 42 | 1 | 15 | 97 | 12 | 92 | 5.74e-21 | 82.8 |
| MsG0780036546.01.T01 | AT2G21660 | 52.113 | 71 | 34 | 0 | 15 | 85 | 14 | 84 | 1.03e-20 | 84.3 |
| MsG0780036546.01.T01 | AT2G21660 | 52.113 | 71 | 34 | 0 | 15 | 85 | 14 | 84 | 1.53e-20 | 84.3 |
| MsG0780036546.01.T01 | AT4G39260 | 47.887 | 71 | 37 | 0 | 15 | 85 | 12 | 82 | 6.49e-19 | 78.6 |
| MsG0780036546.01.T01 | AT4G39260 | 47.887 | 71 | 37 | 0 | 15 | 85 | 12 | 82 | 1.81e-18 | 78.6 |
| MsG0780036546.01.T01 | AT3G08000 | 50.000 | 76 | 38 | 0 | 15 | 90 | 47 | 122 | 2.04e-18 | 77.8 |
| MsG0780036546.01.T01 | AT4G24770 | 45.946 | 74 | 40 | 0 | 16 | 89 | 251 | 324 | 1.45e-17 | 79.0 |
| MsG0780036546.01.T01 | AT4G24770 | 45.946 | 74 | 40 | 0 | 16 | 89 | 251 | 324 | 1.45e-17 | 79.0 |
| MsG0780036546.01.T01 | AT5G50250 | 44.737 | 76 | 42 | 0 | 15 | 90 | 213 | 288 | 5.47e-17 | 77.0 |
| MsG0780036546.01.T01 | AT4G13860 | 52.941 | 68 | 32 | 0 | 16 | 83 | 10 | 77 | 7.36e-17 | 72.0 |
| MsG0780036546.01.T01 | AT5G59865 | 45.946 | 74 | 40 | 0 | 15 | 88 | 32 | 105 | 7.50e-17 | 72.8 |
| MsG0780036546.01.T01 | AT3G26420 | 44.444 | 72 | 40 | 0 | 15 | 86 | 13 | 84 | 8.69e-16 | 73.2 |
| MsG0780036546.01.T01 | AT2G37220 | 43.421 | 76 | 41 | 1 | 16 | 91 | 211 | 284 | 1.31e-15 | 73.2 |
| MsG0780036546.01.T01 | AT4G13860 | 55.932 | 59 | 26 | 0 | 25 | 83 | 2 | 60 | 2.11e-15 | 67.8 |
| MsG0780036546.01.T01 | AT2G27330 | 38.750 | 80 | 49 | 0 | 4 | 83 | 16 | 95 | 5.05e-15 | 68.2 |
| MsG0780036546.01.T01 | AT3G52380 | 50.746 | 67 | 33 | 0 | 25 | 91 | 235 | 301 | 1.79e-14 | 70.5 |
| MsG0780036546.01.T01 | AT3G52380 | 41.429 | 70 | 41 | 0 | 16 | 85 | 123 | 192 | 2.24e-12 | 64.7 |
| MsG0780036546.01.T01 | AT5G55550 | 47.297 | 74 | 37 | 1 | 15 | 88 | 12 | 83 | 2.31e-14 | 70.5 |
| MsG0780036546.01.T01 | AT5G55550 | 47.297 | 74 | 37 | 1 | 15 | 88 | 12 | 83 | 2.31e-14 | 70.5 |
| MsG0780036546.01.T01 | AT5G55550 | 47.297 | 74 | 37 | 1 | 15 | 88 | 12 | 83 | 2.31e-14 | 70.5 |
| MsG0780036546.01.T01 | AT5G55550 | 47.297 | 74 | 37 | 1 | 15 | 88 | 12 | 83 | 2.31e-14 | 70.5 |
| MsG0780036546.01.T01 | AT5G55550 | 47.297 | 74 | 37 | 1 | 15 | 88 | 12 | 83 | 2.31e-14 | 70.5 |
| MsG0780036546.01.T01 | AT5G55550 | 47.297 | 74 | 37 | 1 | 15 | 88 | 12 | 83 | 2.83e-14 | 70.5 |
| MsG0780036546.01.T01 | AT5G55550 | 47.297 | 74 | 37 | 1 | 15 | 88 | 12 | 83 | 2.83e-14 | 70.5 |
| MsG0780036546.01.T01 | AT5G55550 | 47.297 | 74 | 37 | 1 | 15 | 88 | 12 | 83 | 2.83e-14 | 70.5 |
| MsG0780036546.01.T01 | AT5G55550 | 47.297 | 74 | 37 | 1 | 15 | 88 | 12 | 83 | 2.83e-14 | 70.5 |
| MsG0780036546.01.T01 | AT5G47320 | 43.836 | 73 | 41 | 0 | 15 | 87 | 37 | 109 | 3.96e-14 | 68.2 |
| MsG0780036546.01.T01 | AT5G04280 | 42.500 | 80 | 42 | 1 | 15 | 94 | 13 | 88 | 3.99e-14 | 69.3 |
| MsG0780036546.01.T01 | AT3G53460 | 40.506 | 79 | 45 | 1 | 16 | 94 | 264 | 340 | 4.61e-14 | 69.3 |
| MsG0780036546.01.T01 | AT3G53460 | 40.506 | 79 | 45 | 1 | 16 | 94 | 264 | 340 | 4.61e-14 | 69.3 |
| MsG0780036546.01.T01 | AT3G53460 | 40.506 | 79 | 45 | 1 | 16 | 94 | 264 | 340 | 4.61e-14 | 69.3 |
| MsG0780036546.01.T01 | AT4G39260 | 48.214 | 56 | 29 | 0 | 15 | 70 | 12 | 67 | 4.66e-14 | 65.5 |
| MsG0780036546.01.T01 | AT3G53460 | 40.506 | 79 | 45 | 1 | 16 | 94 | 285 | 361 | 5.28e-14 | 69.3 |
| MsG0780036546.01.T01 | AT2G21690 | 41.026 | 78 | 45 | 1 | 15 | 91 | 13 | 90 | 5.37e-14 | 65.5 |
| MsG0780036546.01.T01 | AT3G46020 | 42.105 | 76 | 42 | 1 | 20 | 93 | 18 | 93 | 8.00e-14 | 64.7 |
| MsG0780036546.01.T01 | AT4G26650 | 44.595 | 74 | 39 | 1 | 15 | 88 | 21 | 92 | 8.02e-14 | 68.9 |
| MsG0780036546.01.T01 | AT4G26650 | 44.595 | 74 | 39 | 1 | 15 | 88 | 18 | 89 | 8.07e-14 | 68.9 |
| MsG0780036546.01.T01 | AT1G18630 | 43.434 | 99 | 51 | 1 | 15 | 113 | 42 | 135 | 3.15e-13 | 64.3 |
| MsG0780036546.01.T01 | AT5G55550 | 50.000 | 66 | 31 | 1 | 15 | 80 | 12 | 75 | 3.42e-13 | 67.4 |
| MsG0780036546.01.T01 | AT5G55550 | 50.000 | 66 | 31 | 1 | 15 | 80 | 12 | 75 | 3.47e-13 | 67.4 |
| MsG0780036546.01.T01 | AT2G37510 | 39.506 | 81 | 49 | 0 | 3 | 83 | 28 | 108 | 3.74e-13 | 63.9 |
| MsG0780036546.01.T01 | AT3G07810 | 40.541 | 74 | 42 | 1 | 15 | 88 | 12 | 83 | 5.45e-13 | 66.6 |
| MsG0780036546.01.T01 | AT1G13690 | 38.554 | 83 | 51 | 0 | 15 | 97 | 19 | 101 | 5.82e-13 | 64.3 |
| MsG0780036546.01.T01 | AT3G07810 | 40.541 | 74 | 42 | 1 | 15 | 88 | 12 | 83 | 6.42e-13 | 66.6 |
| MsG0780036546.01.T01 | AT3G14100 | 38.272 | 81 | 49 | 1 | 8 | 87 | 142 | 222 | 7.61e-13 | 66.2 |
| MsG0780036546.01.T01 | AT2G46780 | 36.364 | 99 | 55 | 3 | 15 | 106 | 28 | 125 | 8.94e-13 | 65.9 |
| MsG0780036546.01.T01 | AT2G46780 | 36.364 | 99 | 55 | 3 | 15 | 106 | 28 | 125 | 8.94e-13 | 65.9 |
| MsG0780036546.01.T01 | AT1G22330 | 37.143 | 105 | 56 | 3 | 15 | 118 | 23 | 118 | 1.07e-12 | 65.1 |
| MsG0780036546.01.T01 | AT1G76460 | 40.000 | 80 | 46 | 2 | 15 | 93 | 30 | 108 | 2.47e-12 | 63.9 |
| MsG0780036546.01.T01 | AT5G54580 | 41.333 | 75 | 44 | 0 | 14 | 88 | 61 | 135 | 2.67e-12 | 62.0 |
| MsG0780036546.01.T01 | AT1G60650 | 37.374 | 99 | 56 | 2 | 15 | 111 | 18 | 112 | 3.19e-12 | 63.9 |
| MsG0780036546.01.T01 | AT1G60650 | 37.374 | 99 | 56 | 2 | 15 | 111 | 18 | 112 | 3.19e-12 | 63.9 |
| MsG0780036546.01.T01 | AT1G54080 | 37.037 | 81 | 50 | 1 | 8 | 87 | 146 | 226 | 4.14e-12 | 63.9 |
| MsG0780036546.01.T01 | AT3G20930 | 36.047 | 86 | 49 | 1 | 15 | 94 | 288 | 373 | 5.72e-12 | 63.5 |
| MsG0780036546.01.T01 | AT1G60000 | 40.845 | 71 | 42 | 0 | 15 | 85 | 183 | 253 | 9.51e-12 | 62.4 |
| MsG0780036546.01.T01 | AT5G59860 | 39.241 | 79 | 43 | 1 | 13 | 91 | 75 | 148 | 9.54e-12 | 60.5 |
| MsG0780036546.01.T01 | AT2G33410 | 40.541 | 74 | 42 | 1 | 15 | 88 | 12 | 83 | 1.10e-11 | 62.8 |
| MsG0780036546.01.T01 | AT1G73530 | 34.211 | 76 | 50 | 0 | 14 | 89 | 82 | 157 | 2.20e-11 | 60.1 |
| MsG0780036546.01.T01 | AT1G17370 | 38.272 | 81 | 49 | 1 | 8 | 87 | 137 | 217 | 2.82e-11 | 61.6 |
| MsG0780036546.01.T01 | AT1G17370 | 38.272 | 81 | 49 | 1 | 8 | 87 | 137 | 217 | 3.12e-11 | 61.6 |
| MsG0780036546.01.T01 | AT2G19380 | 35.802 | 81 | 49 | 2 | 15 | 95 | 414 | 491 | 6.01e-11 | 60.8 |
Find 85 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGGTGGTGGGTGGTTTA+TGG | 0.198558 | 7:-9586601 | MsG0780036546.01.T01:CDS |
| ATTCAGCAGCAACTCTAATT+TGG | 0.204920 | 7:-9586380 | MsG0780036546.01.T01:CDS |
| ACAGGCAGGTCCCGAGGTTT+TGG | 0.269411 | 7:-9587525 | MsG0780036546.01.T01:CDS |
| CCTGGTTATCCATGGCTTGC+AGG | 0.291915 | 7:+9587463 | None:intergenic |
| GGCTATGGCGGTGGTGGCGG+TGG | 0.313581 | 7:-9586567 | MsG0780036546.01.T01:CDS |
| GGTGGTGGTGGCGGAAATTA+TGG | 0.318069 | 7:-9586519 | MsG0780036546.01.T01:CDS |
| GGTGGCGGTGGTGGAAATTA+TGG | 0.324580 | 7:-9586555 | MsG0780036546.01.T01:CDS |
| GGTGGCTATGGCGGTGGTGG+CGG | 0.348194 | 7:-9586570 | MsG0780036546.01.T01:CDS |
| GAAAGGGCACGTCCTGGATT+TGG | 0.363001 | 7:-9586618 | MsG0780036546.01.T01:CDS |
| CGCTATGGAGAAGTTCTTGA+TGG | 0.365325 | 7:-9588339 | MsG0780036546.01.T01:intron |
| TTCAGCAGCAACTCTAATTT+GGG | 0.367310 | 7:-9586379 | MsG0780036546.01.T01:CDS |
| AGCAACTCTAATTTGGGATA+TGG | 0.368185 | 7:-9586373 | MsG0780036546.01.T01:CDS |
| TGGTGGGTGGTTTATGGCGG+CGG | 0.384799 | 7:-9586595 | MsG0780036546.01.T01:CDS |
| TTCGTTGTTTGGCTTCAATT+TGG | 0.389630 | 7:-9586147 | MsG0780036546.01.T01:three_prime_UTR |
| ATTATCATGGATCGTGAAAC+AGG | 0.392250 | 7:-9587543 | MsG0780036546.01.T01:CDS |
| TGGGTGGTTTATGGCGGCGG+GGG | 0.400859 | 7:-9586592 | MsG0780036546.01.T01:CDS |
| TATGGCGGTGGTGGCGGTGG+TGG | 0.409908 | 7:-9586564 | MsG0780036546.01.T01:CDS |
| GGCGGTGGCTATGGTGGTGG+TGG | 0.412717 | 7:-9586531 | MsG0780036546.01.T01:CDS |
| AATTATGGTGGCGGTGGCTA+TGG | 0.434778 | 7:-9586540 | MsG0780036546.01.T01:CDS |
| GCTATACTGGTGGCCATGTC+GGG | 0.440508 | 7:-9586426 | MsG0780036546.01.T01:CDS |
| GGTGGGTGGTTTATGGCGGC+GGG | 0.440619 | 7:-9586594 | MsG0780036546.01.T01:CDS |
| GGTGGCTATGGTGGTGGTGG+CGG | 0.440709 | 7:-9586528 | MsG0780036546.01.T01:CDS |
| CACGTCCTGGATTTGGTGGT+GGG | 0.445796 | 7:-9586611 | MsG0780036546.01.T01:CDS |
| CTTCTCCTATTCCGTCATCC+TGG | 0.452476 | 7:+9586344 | None:intergenic |
| TGGTGCCCCGACAGCTATAC+TGG | 0.453141 | 7:-9586439 | MsG0780036546.01.T01:CDS |
| TCAGATTGATCATTGTTCTC+TGG | 0.454360 | 7:+9586281 | None:intergenic |
| TGGTTGTCACAGGAACTTCA+TGG | 0.455403 | 7:-9586669 | MsG0780036546.01.T01:intron |
| GCACGTCCTGGATTTGGTGG+TGG | 0.456754 | 7:-9586612 | MsG0780036546.01.T01:CDS |
| AGGAGAAGGTAAGAATGAAT+TGG | 0.459435 | 7:-9586329 | MsG0780036546.01.T01:three_prime_UTR |
| TCTTTCAGCAAAGATTATCA+TGG | 0.471143 | 7:-9587556 | MsG0780036546.01.T01:intron |
| GGGTGGTTTATGGCGGCGGG+GGG | 0.478420 | 7:-9586591 | MsG0780036546.01.T01:CDS |
| TGGCCACCAGTATAGCTGTC+GGG | 0.495258 | 7:+9586433 | None:intergenic |
| TATGGTGGTGGTGGTACATA+TGG | 0.495451 | 7:-9586501 | MsG0780036546.01.T01:CDS |
| ATCCATGGCTTGCAGGGCAG+AGG | 0.505179 | 7:+9587470 | None:intergenic |
| GGTGGCGGTGGCTATGGTGG+TGG | 0.511997 | 7:-9586534 | MsG0780036546.01.T01:CDS |
| AGCTATACTGGTGGCCATGT+CGG | 0.512380 | 7:-9586427 | MsG0780036546.01.T01:CDS |
| AGCCACCAGGATGACGGAAT+AGG | 0.512460 | 7:-9586349 | MsG0780036546.01.T01:exon |
| CGCAATGATTATAACAGTAG+TGG | 0.517265 | 7:-9586477 | MsG0780036546.01.T01:CDS |
| GCTACAGAAAGGGCACGTCC+TGG | 0.522628 | 7:-9586624 | MsG0780036546.01.T01:CDS |
| CTGGTTATCCATGGCTTGCA+GGG | 0.522966 | 7:+9587464 | None:intergenic |
| TTCGAAGAGCGAGTAAATTG+TGG | 0.527436 | 7:-9586202 | MsG0780036546.01.T01:three_prime_UTR |
| AACCACCCACCACCAAATCC+AGG | 0.528094 | 7:+9586606 | None:intergenic |
| TATGGTGGCGGTGGCTATGG+TGG | 0.530534 | 7:-9586537 | MsG0780036546.01.T01:CDS |
| GTGGGTGGTTTATGGCGGCG+GGG | 0.534411 | 7:-9586593 | MsG0780036546.01.T01:CDS |
| CCTGCAAGCCATGGATAACC+AGG | 0.536544 | 7:-9587463 | MsG0780036546.01.T01:intron |
| GTCGGGACTACTTATGCAGC+TGG | 0.539987 | 7:-9586409 | MsG0780036546.01.T01:CDS |
| CAATTTACTCGCTCTTCGAA+AGG | 0.540990 | 7:+9586205 | None:intergenic |
| AAATATCTGACCTCACCTAC+GGG | 0.541274 | 7:+9586244 | None:intergenic |
| CTTTCTAGGATTGTTTGCAA+TGG | 0.544145 | 7:-9586086 | MsG0780036546.01.T01:three_prime_UTR |
| GGCACATGGTTGTTATCTAA+CGG | 0.545472 | 7:+9586302 | None:intergenic |
| AGTGAACTATGCTACAGAAA+GGG | 0.549793 | 7:-9586634 | MsG0780036546.01.T01:CDS |
| GGCGGAAATTATGGTGGTGG+TGG | 0.550547 | 7:-9586510 | MsG0780036546.01.T01:CDS |
| TCATGGATCGTGAAACAGGC+AGG | 0.555548 | 7:-9587539 | MsG0780036546.01.T01:CDS |
| TGGTGGTGGGTGGTTTATGG+CGG | 0.558734 | 7:-9586598 | MsG0780036546.01.T01:CDS |
| AGGGCACGTCCTGGATTTGG+TGG | 0.560582 | 7:-9586615 | MsG0780036546.01.T01:CDS |
| GTCCTGGATTTGGTGGTGGG+TGG | 0.560844 | 7:-9586608 | MsG0780036546.01.T01:CDS |
| ATCCTCTGCCCTGCAAGCCA+TGG | 0.561128 | 7:-9587472 | MsG0780036546.01.T01:CDS |
| AGTTATGAAGCCAAAACCTC+GGG | 0.561538 | 7:+9587515 | None:intergenic |
| GGTGGCGGAAATTATGGTGG+TGG | 0.561564 | 7:-9586513 | MsG0780036546.01.T01:CDS |
| AAAATATCTGACCTCACCTA+CGG | 0.565624 | 7:+9586243 | None:intergenic |
| GATCATTGTTCTCTGGCACA+TGG | 0.570782 | 7:+9586288 | None:intergenic |
| GGTGGTGGCGGAAATTATGG+TGG | 0.577570 | 7:-9586516 | MsG0780036546.01.T01:CDS |
| ATGGCCACCAGTATAGCTGT+CGG | 0.577701 | 7:+9586432 | None:intergenic |
| GGTGGAAATTATGGTGGCGG+TGG | 0.579466 | 7:-9586546 | MsG0780036546.01.T01:CDS |
| GAGTGAACTATGCTACAGAA+AGG | 0.582117 | 7:-9586635 | MsG0780036546.01.T01:CDS |
| TGATAATACCTGGTTATCCA+TGG | 0.583626 | 7:+9587455 | None:intergenic |
| TATGGTAGCCACCAGGATGA+CGG | 0.586796 | 7:-9586355 | MsG0780036546.01.T01:CDS |
| GGTGGTGGAAATTATGGTGG+CGG | 0.594867 | 7:-9586549 | MsG0780036546.01.T01:CDS |
| CATAACTTTCGCAACTAGCG+AGG | 0.595409 | 7:-9587499 | MsG0780036546.01.T01:CDS |
| CTGCATAAGTAGTCCCGACA+TGG | 0.604557 | 7:+9586413 | None:intergenic |
| AAGTTATGAAGCCAAAACCT+CGG | 0.608782 | 7:+9587514 | None:intergenic |
| CGTGAAACAGGCAGGTCCCG+AGG | 0.612383 | 7:-9587531 | MsG0780036546.01.T01:CDS |
| CAGGATGACGGAATAGGAGA+AGG | 0.614651 | 7:-9586343 | MsG0780036546.01.T01:exon |
| GGCGGTGGTGGAAATTATGG+TGG | 0.619217 | 7:-9586552 | MsG0780036546.01.T01:CDS |
| CTGACTATAAATAATAAAGT+CGG | 0.622741 | 7:+9586022 | None:intergenic |
| GGCCACCAGTATAGCTGTCG+GGG | 0.632101 | 7:+9586434 | None:intergenic |
| CTCCTATTCCGTCATCCTGG+TGG | 0.633150 | 7:+9586347 | None:intergenic |
| TATGCTGAGACCCGTAGGTG+AGG | 0.642366 | 7:-9586254 | MsG0780036546.01.T01:three_prime_UTR |
| TGTCACAGGAACTTCATGGT+CGG | 0.655084 | 7:-9586665 | MsG0780036546.01.T01:intron |
| TTTGGGATATGGTAGCCACC+AGG | 0.660216 | 7:-9586362 | MsG0780036546.01.T01:CDS |
| ATGACTATGCTGAGACCCGT+AGG | 0.661801 | 7:-9586259 | MsG0780036546.01.T01:three_prime_UTR |
| TGCCCCGACAGCTATACTGG+TGG | 0.667109 | 7:-9586436 | MsG0780036546.01.T01:CDS |
| GGGACTACTTATGCAGCTGG+TGG | 0.685565 | 7:-9586406 | MsG0780036546.01.T01:CDS |
| AGTAGTGGAAGCTATGCAAG+TGG | 0.688222 | 7:-9586462 | MsG0780036546.01.T01:CDS |
| AGTGGAAGCTATGCAAGTGG+TGG | 0.727125 | 7:-9586459 | MsG0780036546.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTTCTAACTTATTT+CGG | + | Chr7:9587134-9587153 | None:intergenic | 10.0% |
| !!! | TATTTGTACAATTTTTTATA+TGG | - | Chr7:9587633-9587652 | MsG0780036546.01.T01:intron | 10.0% |
| !! | TAATAGTCATATAAAAAAAG+CGG | - | Chr7:9586785-9586804 | MsG0780036546.01.T01:intron | 15.0% |
| !! | TCAATTTGAATTTATGATAA+TGG | + | Chr7:9587492-9587511 | None:intergenic | 15.0% |
| !! | TCTTGAAGAATATATTTAAA+AGG | - | Chr7:9587238-9587257 | MsG0780036546.01.T01:intron | 15.0% |
| !!! | TAATTAGAAATTCAAACTTT+TGG | + | Chr7:9586444-9586463 | None:intergenic | 15.0% |
| !!! | TTTAATTTTAAAGAAAAGTC+CGG | - | Chr7:9586515-9586534 | MsG0780036546.01.T01:CDS | 15.0% |
| !! | AAAAGGAAATTCTTTCAAAA+TGG | - | Chr7:9587255-9587274 | MsG0780036546.01.T01:intron | 20.0% |
| !! | AAAATTGTACAAATAGAAGT+TGG | + | Chr7:9587628-9587647 | None:intergenic | 20.0% |
| !! | AAAGGAAATTCTTTCAAAAT+GGG | - | Chr7:9587256-9587275 | MsG0780036546.01.T01:intron | 20.0% |
| !! | AAATTGAAATATAACGACTT+GGG | - | Chr7:9587505-9587524 | MsG0780036546.01.T01:CDS | 20.0% |
| !! | AATGCTTAACAATGATAATT+TGG | + | Chr7:9587391-9587410 | None:intergenic | 20.0% |
| !! | ATATAAAATAAGCATCATAC+TGG | + | Chr7:9586249-9586268 | None:intergenic | 20.0% |
| !! | CTCTATCAATCATATATAAA+AGG | + | Chr7:9586724-9586743 | None:intergenic | 20.0% |
| !! | CTGACTATAAATAATAAAGT+CGG | + | Chr7:9588418-9588437 | None:intergenic | 20.0% |
| !! | TTAGAAAATAAATGCATATG+TGG | - | Chr7:9587141-9587160 | MsG0780036546.01.T01:intron | 20.0% |
| !!! | ATTATTTTTGAATACTCAGT+CGG | + | Chr7:9587299-9587318 | None:intergenic | 20.0% |
| !!! | GTATGATGCTTATTTTATAT+AGG | - | Chr7:9586249-9586268 | MsG0780036546.01.T01:three_prime_UTR | 20.0% |
| !!! | TATTTTTACCAAATTATCCT+TGG | - | Chr7:9587448-9587467 | MsG0780036546.01.T01:intron | 20.0% |
| !!! | TCAAATTTTAATCATAATGC+AGG | - | Chr7:9586029-9586048 | MsG0780036546.01.T01:three_prime_UTR | 20.0% |
| ! | AAAATCGCTCAAAATAAAGT+GGG | - | Chr7:9586647-9586666 | MsG0780036546.01.T01:CDS | 25.0% |
| ! | AACCTGATATGATGAAAAAT+TGG | + | Chr7:9586150-9586169 | None:intergenic | 25.0% |
| ! | ATAATCATCATTTATTGCTG+TGG | + | Chr7:9586561-9586580 | None:intergenic | 25.0% |
| ! | ATTCAGATACAATTTACAAG+TGG | + | Chr7:9586197-9586216 | None:intergenic | 25.0% |
| ! | ATTTCGGCTAAATAAATGTA+AGG | + | Chr7:9587118-9587137 | None:intergenic | 25.0% |
| ! | CAAATTGAAATATAACGACT+TGG | - | Chr7:9587504-9587523 | MsG0780036546.01.T01:CDS | 25.0% |
| ! | TAAAATCGCTCAAAATAAAG+TGG | - | Chr7:9586646-9586665 | MsG0780036546.01.T01:CDS | 25.0% |
| ! | TGAAAGAACATTAAAATGAG+AGG | + | Chr7:9586868-9586887 | None:intergenic | 25.0% |
| ! | TGTAAAAATAAGAGCTTTCT+AGG | - | Chr7:9588337-9588356 | MsG0780036546.01.T01:intron | 25.0% |
| ! | TTGCTTGTTTCACAAATTTA+AGG | - | Chr7:9587327-9587346 | MsG0780036546.01.T01:intron | 25.0% |
| ! | TTGTAGCATCTAAATTATGT+TGG | - | Chr7:9587748-9587767 | MsG0780036546.01.T01:intron | 25.0% |
| ! | TTTCGGCTAAATAAATGTAA+GGG | + | Chr7:9587117-9587136 | None:intergenic | 25.0% |
| !! | ATGCATATAGTATTAGTTTG+AGG | - | Chr7:9587532-9587551 | MsG0780036546.01.T01:CDS | 25.0% |
| !! | TACCAATTTTTCATCATATC+AGG | - | Chr7:9586145-9586164 | MsG0780036546.01.T01:three_prime_UTR | 25.0% |
| !! | TGATAATGTGACAATTATTG+TGG | - | Chr7:9587569-9587588 | MsG0780036546.01.T01:intron | 25.0% |
| !! | TGCATATAGTATTAGTTTGA+GGG | - | Chr7:9587533-9587552 | MsG0780036546.01.T01:CDS | 25.0% |
| !!! | TATAGGCTTTAATAGACTTT+TGG | - | Chr7:9586266-9586285 | MsG0780036546.01.T01:three_prime_UTR | 25.0% |
| !!! | TTATTTTTGAATACTCAGTC+GGG | + | Chr7:9587298-9587317 | None:intergenic | 25.0% |
| !!! | TTCAAACTTTTGGTGTTTTT+TGG | + | Chr7:9586434-9586453 | None:intergenic | 25.0% |
| AAATCGCTCAAAATAAAGTG+GGG | - | Chr7:9586648-9586667 | MsG0780036546.01.T01:CDS | 30.0% | |
| AAATTATCCTTGGTAAGCAT+TGG | - | Chr7:9587458-9587477 | MsG0780036546.01.T01:intron | 30.0% | |
| AATGCTTACCAAGGATAATT+TGG | + | Chr7:9587459-9587478 | None:intergenic | 30.0% | |
| ACCATTATCATGATGAAAGA+TGG | - | Chr7:9587420-9587439 | MsG0780036546.01.T01:intron | 30.0% | |
| ATCAGAAAGGGAAAAACATA+AGG | - | Chr7:9586620-9586639 | MsG0780036546.01.T01:CDS | 30.0% | |
| GGGGAATATCAAAACATAAA+GGG | + | Chr7:9586323-9586342 | None:intergenic | 30.0% | |
| GTGTCAATTTGAGGAAAATT+CGG | - | Chr7:9586583-9586602 | MsG0780036546.01.T01:CDS | 30.0% | |
| TAGTCATATAAAAAAAGCGG+CGG | - | Chr7:9586788-9586807 | MsG0780036546.01.T01:intron | 30.0% | |
| TATGTGGCTGTAATATCATA+AGG | - | Chr7:9587157-9587176 | MsG0780036546.01.T01:intron | 30.0% | |
| TCAGAAAGGGAAAAACATAA+GGG | - | Chr7:9586621-9586640 | MsG0780036546.01.T01:CDS | 30.0% | |
| TCATGAAAACTGATAATACC+TGG | + | Chr7:9586995-9587014 | None:intergenic | 30.0% | |
| TCCATCTTTCATCATGATAA+TGG | + | Chr7:9587424-9587443 | None:intergenic | 30.0% | |
| TCTTTCAGCAAAGATTATCA+TGG | - | Chr7:9586881-9586900 | MsG0780036546.01.T01:intron | 30.0% | |
| TGATTATCAGTGTCAATTTG+AGG | - | Chr7:9586574-9586593 | MsG0780036546.01.T01:CDS | 30.0% | |
| TGGGGAATATCAAAACATAA+AGG | + | Chr7:9586324-9586343 | None:intergenic | 30.0% | |
| ! | AAACACCTTTTGTTCATACA+AGG | - | Chr7:9587060-9587079 | MsG0780036546.01.T01:intron | 30.0% |
| ! | ATGTTTTTCCCTTTCTGATT+TGG | + | Chr7:9586619-9586638 | None:intergenic | 30.0% |
| ! | TAAATTATGTTGGTTGTCAC+AGG | - | Chr7:9587758-9587777 | MsG0780036546.01.T01:intron | 30.0% |
| ! | TTTTGCAAACCTCAAAATGT+TGG | - | Chr7:9587716-9587735 | MsG0780036546.01.T01:intron | 30.0% |
| !! | TAGAGTGCTTAACTTTGTTT+TGG | - | Chr7:9586739-9586758 | MsG0780036546.01.T01:intron | 30.0% |
| AAAAGGCTTAGTTGCACTTT+GGG | + | Chr7:9586707-9586726 | None:intergenic | 35.0% | |
| AAAATATCTGACCTCACCTA+CGG | + | Chr7:9588197-9588216 | None:intergenic | 35.0% | |
| AAGTTATGAAGCCAAAACCT+CGG | + | Chr7:9586926-9586945 | None:intergenic | 35.0% | |
| AATCGCTCAAAATAAAGTGG+GGG | - | Chr7:9586649-9586668 | MsG0780036546.01.T01:CDS | 35.0% | |
| AATCGCTTAACTGTGATACT+TGG | - | Chr7:9586677-9586696 | MsG0780036546.01.T01:intron | 35.0% | |
| AGGAGAAGGTAAGAATGAAT+TGG | - | Chr7:9588108-9588127 | MsG0780036546.01.T01:intron | 35.0% | |
| AGTGAACTATGCTACAGAAA+GGG | - | Chr7:9587803-9587822 | MsG0780036546.01.T01:intron | 35.0% | |
| ATGTGACAATTATTGTGGCA+CGG | - | Chr7:9587574-9587593 | MsG0780036546.01.T01:intron | 35.0% | |
| ATTATCATGGATCGTGAAAC+AGG | - | Chr7:9586894-9586913 | MsG0780036546.01.T01:intron | 35.0% | |
| ATTCAGCAGCAACTCTAATT+TGG | - | Chr7:9588057-9588076 | MsG0780036546.01.T01:intron | 35.0% | |
| CAACTCCTTGTATGAACAAA+AGG | + | Chr7:9587068-9587087 | None:intergenic | 35.0% | |
| CAATTTGAGGAAAATTCGGA+TGG | - | Chr7:9586587-9586606 | MsG0780036546.01.T01:CDS | 35.0% | |
| CGCAATGATTATAACAGTAG+TGG | - | Chr7:9587960-9587979 | MsG0780036546.01.T01:intron | 35.0% | |
| CTAAAAGTCACCAATTCACA+TGG | - | Chr7:9587035-9587054 | MsG0780036546.01.T01:intron | 35.0% | |
| TAAAAGGCTTAGTTGCACTT+TGG | + | Chr7:9586708-9586727 | None:intergenic | 35.0% | |
| TCAGATTGATCATTGTTCTC+TGG | + | Chr7:9588159-9588178 | None:intergenic | 35.0% | |
| TCCAACTTTCATAGTTAGTG+TGG | - | Chr7:9586381-9586400 | MsG0780036546.01.T01:CDS | 35.0% | |
| TGATAATACCTGGTTATCCA+TGG | + | Chr7:9586985-9587004 | None:intergenic | 35.0% | |
| TTCAGCAGCAACTCTAATTT+GGG | - | Chr7:9588058-9588077 | MsG0780036546.01.T01:intron | 35.0% | |
| TTCATTTGCTCTCATCTGTA+CGG | - | Chr7:9586469-9586488 | MsG0780036546.01.T01:CDS | 35.0% | |
| ! | AGCAACTCTAATTTGGGATA+TGG | - | Chr7:9588064-9588083 | MsG0780036546.01.T01:intron | 35.0% |
| ! | AGGTGTTTTACCATGTGAAT+TGG | + | Chr7:9587048-9587067 | None:intergenic | 35.0% |
| ! | CTTTTGTTCATACAAGGAGT+TGG | - | Chr7:9587066-9587085 | MsG0780036546.01.T01:intron | 35.0% |
| ! | GAAACATTGCCAACATTTTG+AGG | + | Chr7:9587728-9587747 | None:intergenic | 35.0% |
| ! | GTATCACAGTTAAGCGATTT+TGG | + | Chr7:9586676-9586695 | None:intergenic | 35.0% |
| ! | GTTTTCAGAACTTCGTTGTT+TGG | - | Chr7:9588279-9588298 | MsG0780036546.01.T01:intron | 35.0% |
| ! | TTCGTTGTTTGGCTTCAATT+TGG | - | Chr7:9588290-9588309 | MsG0780036546.01.T01:intron | 35.0% |
| !! | CTTTCTAGGATTGTTTGCAA+TGG | - | Chr7:9588351-9588370 | MsG0780036546.01.T01:CDS | 35.0% |
| AAATATCTGACCTCACCTAC+GGG | + | Chr7:9588196-9588215 | None:intergenic | 40.0% | |
| AGTTATGAAGCCAAAACCTC+GGG | + | Chr7:9586925-9586944 | None:intergenic | 40.0% | |
| ATCGCTCAAAATAAAGTGGG+GGG | - | Chr7:9586650-9586669 | MsG0780036546.01.T01:CDS | 40.0% | |
| ATGTCCCCTTAGTGCAAATT+TGG | + | Chr7:9586349-9586368 | None:intergenic | 40.0% | |
| CAATTTACTCGCTCTTCGAA+AGG | + | Chr7:9588235-9588254 | None:intergenic | 40.0% | |
| CATAGCGAGAAAAAGCTTCT+CGG | + | Chr7:9586085-9586104 | None:intergenic | 40.0% | |
| CATCCCAAATTTGCACTAAG+GGG | - | Chr7:9586342-9586361 | MsG0780036546.01.T01:exon | 40.0% | |
| CCATCCCAAATTTGCACTAA+GGG | - | Chr7:9586341-9586360 | MsG0780036546.01.T01:exon | 40.0% | |
| GAATACACCAATGCTTACCA+AGG | + | Chr7:9587468-9587487 | None:intergenic | 40.0% | |
| GAGTGAACTATGCTACAGAA+AGG | - | Chr7:9587802-9587821 | MsG0780036546.01.T01:intron | 40.0% | |
| GCCACACTAACTATGAAAGT+TGG | + | Chr7:9586385-9586404 | None:intergenic | 40.0% | |
| GGAGACTACCAAATCAGAAA+GGG | - | Chr7:9586608-9586627 | MsG0780036546.01.T01:CDS | 40.0% | |
| GGCACATGGTTGTTATCTAA+CGG | + | Chr7:9588138-9588157 | None:intergenic | 40.0% | |
| TCATTTGCTCTCATCTGTAC+GGG | - | Chr7:9586470-9586489 | MsG0780036546.01.T01:CDS | 40.0% | |
| TGGAGACTACCAAATCAGAA+AGG | - | Chr7:9586607-9586626 | MsG0780036546.01.T01:CDS | 40.0% | |
| TGTCCCCTTAGTGCAAATTT+GGG | + | Chr7:9586348-9586367 | None:intergenic | 40.0% | |
| TTCGAAGAGCGAGTAAATTG+TGG | - | Chr7:9588235-9588254 | MsG0780036546.01.T01:intron | 40.0% | |
| TTGTTCATACAAGGAGTTGG+AGG | - | Chr7:9587069-9587088 | MsG0780036546.01.T01:intron | 40.0% | |
| ! | CCTTAGTGCAAATTTGGGAT+GGG | + | Chr7:9586343-9586362 | None:intergenic | 40.0% |
| ! | CTTAGTGCAAATTTGGGATG+GGG | + | Chr7:9586342-9586361 | None:intergenic | 40.0% |
| ! | GTGTTGTGATTGTGCGATTT+TGG | - | Chr7:9586297-9586316 | MsG0780036546.01.T01:three_prime_UTR | 40.0% |
| !!! | CATCTGTACGGGTTGATTTT+TGG | - | Chr7:9586481-9586500 | MsG0780036546.01.T01:CDS | 40.0% |
| ATCCAACTCTGATCGTCAAC+CGG | + | Chr7:9586537-9586556 | None:intergenic | 45.0% | |
| ATCGCACAATCACAACACTC+TGG | + | Chr7:9586295-9586314 | None:intergenic | 45.0% | |
| CATAACTTTCGCAACTAGCG+AGG | - | Chr7:9586938-9586957 | MsG0780036546.01.T01:intron | 45.0% | |
| CCCATCCCAAATTTGCACTA+AGG | - | Chr7:9586340-9586359 | MsG0780036546.01.T01:exon | 45.0% | |
| CCCTTAGTGCAAATTTGGGA+TGG | + | Chr7:9586344-9586363 | None:intergenic | 45.0% | |
| CGCTATGGAGAAGTTCTTGA+TGG | - | Chr7:9586098-9586117 | MsG0780036546.01.T01:three_prime_UTR | 45.0% | |
| CGCTTAACTGTGATACTTGG+AGG | - | Chr7:9586680-9586699 | MsG0780036546.01.T01:intron | 45.0% | |
| GACAATTATTGTGGCACGGA+GGG | - | Chr7:9587578-9587597 | MsG0780036546.01.T01:intron | 45.0% | |
| GATCATTGTTCTCTGGCACA+TGG | + | Chr7:9588152-9588171 | None:intergenic | 45.0% | |
| TCGCACAATCACAACACTCT+GGG | + | Chr7:9586294-9586313 | None:intergenic | 45.0% | |
| TGACAATTATTGTGGCACGG+AGG | - | Chr7:9587577-9587596 | MsG0780036546.01.T01:intron | 45.0% | |
| TGGTTGTCACAGGAACTTCA+TGG | - | Chr7:9587768-9587787 | MsG0780036546.01.T01:intron | 45.0% | |
| TGTCACAGGAACTTCATGGT+CGG | - | Chr7:9587772-9587791 | MsG0780036546.01.T01:intron | 45.0% | |
| ! | AGTAGTGGAAGCTATGCAAG+TGG | - | Chr7:9587975-9587994 | MsG0780036546.01.T01:intron | 45.0% |
| !! | ATTTGGTGGTGGGTGGTTTA+TGG | - | Chr7:9587836-9587855 | MsG0780036546.01.T01:intron | 45.0% |
| !! | CGAGAAGCTTTTTCTCGCTA+TGG | - | Chr7:9586083-9586102 | MsG0780036546.01.T01:three_prime_UTR | 45.0% |
| !! | TATGGTGGTGGTGGTACATA+TGG | - | Chr7:9587936-9587955 | MsG0780036546.01.T01:intron | 45.0% |
| AGCTATACTGGTGGCCATGT+CGG | - | Chr7:9588010-9588029 | MsG0780036546.01.T01:intron | 50.0% | |
| AGTGGAAGCTATGCAAGTGG+TGG | - | Chr7:9587978-9587997 | MsG0780036546.01.T01:intron | 50.0% | |
| ATGACTATGCTGAGACCCGT+AGG | - | Chr7:9588178-9588197 | MsG0780036546.01.T01:intron | 50.0% | |
| ATGGCCACCAGTATAGCTGT+CGG | + | Chr7:9588008-9588027 | None:intergenic | 50.0% | |
| CGCACAATCACAACACTCTG+GGG | + | Chr7:9586293-9586312 | None:intergenic | 50.0% | |
| CTGCATAAGTAGTCCCGACA+TGG | + | Chr7:9588027-9588046 | None:intergenic | 50.0% | |
| CTTCTCCTATTCCGTCATCC+TGG | + | Chr7:9588096-9588115 | None:intergenic | 50.0% | |
| GCACAATCACAACACTCTGG+GGG | + | Chr7:9586292-9586311 | None:intergenic | 50.0% | |
| TATGGTAGCCACCAGGATGA+CGG | - | Chr7:9588082-9588101 | MsG0780036546.01.T01:intron | 50.0% | |
| TCATGGATCGTGAAACAGGC+AGG | - | Chr7:9586898-9586917 | MsG0780036546.01.T01:intron | 50.0% | |
| ! | CTGGTTATCCATGGCTTGCA+GGG | + | Chr7:9586976-9586995 | None:intergenic | 50.0% |
| ! | TTTGGGATATGGTAGCCACC+AGG | - | Chr7:9588075-9588094 | MsG0780036546.01.T01:intron | 50.0% |
| !! | AATTATGGTGGCGGTGGCTA+TGG | - | Chr7:9587897-9587916 | MsG0780036546.01.T01:intron | 50.0% |
| !! | CAGGATGACGGAATAGGAGA+AGG | - | Chr7:9588094-9588113 | MsG0780036546.01.T01:intron | 50.0% |
| !! | GGTGGTGGAAATTATGGTGG+CGG | - | Chr7:9587888-9587907 | MsG0780036546.01.T01:intron | 50.0% |
| AACCACCCACCACCAAATCC+AGG | + | Chr7:9587834-9587853 | None:intergenic | 55.0% | |
| CCTGCAAGCCATGGATAACC+AGG | - | Chr7:9586974-9586993 | MsG0780036546.01.T01:intron | 55.0% | |
| CTCCTATTCCGTCATCCTGG+TGG | + | Chr7:9588093-9588112 | None:intergenic | 55.0% | |
| GCTATACTGGTGGCCATGTC+GGG | - | Chr7:9588011-9588030 | MsG0780036546.01.T01:intron | 55.0% | |
| GGGACTACTTATGCAGCTGG+TGG | - | Chr7:9588031-9588050 | MsG0780036546.01.T01:intron | 55.0% | |
| GTCCGGTTGACGATCAGAGT+TGG | - | Chr7:9586532-9586551 | MsG0780036546.01.T01:CDS | 55.0% | |
| GTCGGGACTACTTATGCAGC+TGG | - | Chr7:9588028-9588047 | MsG0780036546.01.T01:intron | 55.0% | |
| TATGCTGAGACCCGTAGGTG+AGG | - | Chr7:9588183-9588202 | MsG0780036546.01.T01:intron | 55.0% | |
| TGGCCACCAGTATAGCTGTC+GGG | + | Chr7:9588007-9588026 | None:intergenic | 55.0% | |
| ! | CCTGGTTATCCATGGCTTGC+AGG | + | Chr7:9586977-9586996 | None:intergenic | 55.0% |
| ! | GAAAGGGCACGTCCTGGATT+TGG | - | Chr7:9587819-9587838 | MsG0780036546.01.T01:intron | 55.0% |
| !! | AGCCACCAGGATGACGGAAT+AGG | - | Chr7:9588088-9588107 | MsG0780036546.01.T01:intron | 55.0% |
| !! | CACGTCCTGGATTTGGTGGT+GGG | - | Chr7:9587826-9587845 | MsG0780036546.01.T01:intron | 55.0% |
| !! | GGCGGAAATTATGGTGGTGG+TGG | - | Chr7:9587927-9587946 | MsG0780036546.01.T01:intron | 55.0% |
| !! | GGCGGTGGTGGAAATTATGG+TGG | - | Chr7:9587885-9587904 | MsG0780036546.01.T01:intron | 55.0% |
| !! | GGTGGAAATTATGGTGGCGG+TGG | - | Chr7:9587891-9587910 | MsG0780036546.01.T01:intron | 55.0% |
| !! | GGTGGCGGAAATTATGGTGG+TGG | - | Chr7:9587924-9587943 | MsG0780036546.01.T01:intron | 55.0% |
| !! | GGTGGCGGTGGTGGAAATTA+TGG | - | Chr7:9587882-9587901 | MsG0780036546.01.T01:intron | 55.0% |
| !! | GGTGGTGGCGGAAATTATGG+TGG | - | Chr7:9587921-9587940 | MsG0780036546.01.T01:intron | 55.0% |
| !! | GGTGGTGGTGGCGGAAATTA+TGG | - | Chr7:9587918-9587937 | MsG0780036546.01.T01:intron | 55.0% |
| !! | TGGTGGTGGGTGGTTTATGG+CGG | - | Chr7:9587839-9587858 | MsG0780036546.01.T01:intron | 55.0% |
| AGGGCACGTCCTGGATTTGG+TGG | - | Chr7:9587822-9587841 | MsG0780036546.01.T01:intron | 60.0% | |
| ATCCTCTGCCCTGCAAGCCA+TGG | - | Chr7:9586965-9586984 | MsG0780036546.01.T01:intron | 60.0% | |
| GGCCACCAGTATAGCTGTCG+GGG | + | Chr7:9588006-9588025 | None:intergenic | 60.0% | |
| TGCCCCGACAGCTATACTGG+TGG | - | Chr7:9588001-9588020 | MsG0780036546.01.T01:intron | 60.0% | |
| TGGTGCCCCGACAGCTATAC+TGG | - | Chr7:9587998-9588017 | MsG0780036546.01.T01:intron | 60.0% | |
| ! | ACAGGCAGGTCCCGAGGTTT+TGG | - | Chr7:9586912-9586931 | MsG0780036546.01.T01:intron | 60.0% |
| ! | ATCCATGGCTTGCAGGGCAG+AGG | + | Chr7:9586970-9586989 | None:intergenic | 60.0% |
| ! | GCTACAGAAAGGGCACGTCC+TGG | - | Chr7:9587813-9587832 | MsG0780036546.01.T01:intron | 60.0% |
| ! | TGGTGGGTGGTTTATGGCGG+CGG | - | Chr7:9587842-9587861 | MsG0780036546.01.T01:intron | 60.0% |
| !! | GCACGTCCTGGATTTGGTGG+TGG | - | Chr7:9587825-9587844 | MsG0780036546.01.T01:intron | 60.0% |
| !! | GTCCTGGATTTGGTGGTGGG+TGG | - | Chr7:9587829-9587848 | MsG0780036546.01.T01:intron | 60.0% |
| !! | TATGGTGGCGGTGGCTATGG+TGG | - | Chr7:9587900-9587919 | MsG0780036546.01.T01:intron | 60.0% |
| CGTGAAACAGGCAGGTCCCG+AGG | - | Chr7:9586906-9586925 | MsG0780036546.01.T01:intron | 65.0% | |
| GGTGGGTGGTTTATGGCGGC+GGG | - | Chr7:9587843-9587862 | MsG0780036546.01.T01:intron | 65.0% | |
| GTGGGTGGTTTATGGCGGCG+GGG | - | Chr7:9587844-9587863 | MsG0780036546.01.T01:intron | 65.0% | |
| TGGGTGGTTTATGGCGGCGG+GGG | - | Chr7:9587845-9587864 | MsG0780036546.01.T01:intron | 65.0% | |
| !! | GGTGGCTATGGTGGTGGTGG+CGG | - | Chr7:9587909-9587928 | MsG0780036546.01.T01:intron | 65.0% |
| GGGTGGTTTATGGCGGCGGG+GGG | - | Chr7:9587846-9587865 | MsG0780036546.01.T01:intron | 70.0% | |
| TGGTTTATGGCGGCGGGGGG+TGG | - | Chr7:9587849-9587868 | MsG0780036546.01.T01:intron | 70.0% | |
| ! | GGTGGCGGTGGCTATGGTGG+TGG | - | Chr7:9587903-9587922 | MsG0780036546.01.T01:intron | 70.0% |
| ! | GGTGGCTATGGCGGTGGTGG+CGG | - | Chr7:9587867-9587886 | MsG0780036546.01.T01:intron | 70.0% |
| !! | GGCGGTGGCTATGGTGGTGG+TGG | - | Chr7:9587906-9587925 | MsG0780036546.01.T01:intron | 70.0% |
| !! | TATGGCGGTGGTGGCGGTGG+TGG | - | Chr7:9587873-9587892 | MsG0780036546.01.T01:intron | 70.0% |
| ATGGCGGCGGGGGGTGGCTA+TGG | - | Chr7:9587855-9587874 | MsG0780036546.01.T01:intron | 75.0% | |
| GGGGGTGGCTATGGCGGTGG+TGG | - | Chr7:9587864-9587883 | MsG0780036546.01.T01:intron | 75.0% | |
| !! | GGCTATGGCGGTGGTGGCGG+TGG | - | Chr7:9587870-9587889 | MsG0780036546.01.T01:intron | 75.0% |
| ! | GCGGCGGGGGGTGGCTATGG+CGG | - | Chr7:9587858-9587877 | MsG0780036546.01.T01:intron | 80.0% |
| ! | GCGGGGGGTGGCTATGGCGG+TGG | - | Chr7:9587861-9587880 | MsG0780036546.01.T01:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 9586008 | 9588451 | 9586008 | ID=MsG0780036546.01;Name=MsG0780036546.01 |
| Chr7 | mRNA | 9586008 | 9588451 | 9586008 | ID=MsG0780036546.01.T01;Parent=MsG0780036546.01;Name=MsG0780036546.01.T01;_AED=0.48;_eAED=0.50;_QI=0|1|0.66|1|1|1|3|342|182 |
| Chr7 | exon | 9586008 | 9586679 | 9586008 | ID=MsG0780036546.01.T01:exon:1868;Parent=MsG0780036546.01.T01 |
| Chr7 | exon | 9587464 | 9587570 | 9587464 | ID=MsG0780036546.01.T01:exon:1867;Parent=MsG0780036546.01.T01 |
| Chr7 | exon | 9588340 | 9588451 | 9588340 | ID=MsG0780036546.01.T01:exon:1866;Parent=MsG0780036546.01.T01 |
| Chr7 | CDS | 9588340 | 9588451 | 9588340 | ID=MsG0780036546.01.T01:cds;Parent=MsG0780036546.01.T01 |
| Chr7 | CDS | 9587464 | 9587570 | 9587464 | ID=MsG0780036546.01.T01:cds;Parent=MsG0780036546.01.T01 |
| Chr7 | CDS | 9586350 | 9586679 | 9586350 | ID=MsG0780036546.01.T01:cds;Parent=MsG0780036546.01.T01 |
| Chr7 | three_prime_UTR | 9586008 | 9586349 | 9586008 | ID=MsG0780036546.01.T01:three_prime_utr;Parent=MsG0780036546.01.T01 |
| Gene Sequence |
| Protein sequence |
