Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010383.01.T01 | KAG4913629.1 | 92.958 | 71 | 5 | 0 | 22 | 92 | 10 | 80 | 3.18E-39 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010383.01.T01 | P46302 | 90.769 | 65 | 6 | 0 | 28 | 92 | 1 | 65 | 4.98E-35 | 117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010383.01.T01 | A0A151U3X1 | 95.522 | 67 | 3 | 0 | 26 | 92 | 3 | 69 | 4.21e-38 | 131 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048135.01 | MsG0280010383.01 | 0.879552 | 1.135472e-69 | 6.181287e-66 |
| MsG0080048971.01 | MsG0280010383.01 | 0.819676 | 1.024887e-52 | 7.939161e-50 |
| MsG0180000339.01 | MsG0280010383.01 | 0.811103 | 8.276926e-51 | 5.078390e-48 |
| MsG0180000456.01 | MsG0280010383.01 | 0.823816 | 1.129914e-53 | 9.834199e-51 |
| MsG0180000575.01 | MsG0280010383.01 | 0.870131 | 1.839427e-66 | 7.076046e-63 |
| MsG0180000614.01 | MsG0280010383.01 | 0.862508 | 4.823977e-64 | 1.416288e-60 |
| MsG0180000615.01 | MsG0280010383.01 | 0.864258 | 1.383656e-64 | 4.316877e-61 |
| MsG0180000743.01 | MsG0280010383.01 | 0.838182 | 3.346617e-57 | 4.447176e-54 |
| MsG0180002458.01 | MsG0280010383.01 | 0.807746 | 4.348835e-50 | 2.441763e-47 |
| MsG0180003117.01 | MsG0280010383.01 | 0.825854 | 3.735952e-54 | 3.446118e-51 |
| MsG0180003612.01 | MsG0280010383.01 | 0.840268 | 9.631249e-58 | 1.364644e-54 |
| MsG0180003793.01 | MsG0280010383.01 | 0.838907 | 2.176007e-57 | 2.956289e-54 |
| MsG0180004129.01 | MsG0280010383.01 | 0.846316 | 2.344814e-59 | 4.019675e-56 |
| MsG0180004130.01 | MsG0280010383.01 | 0.853579 | 2.176401e-61 | 4.725183e-58 |
| MsG0180004509.01 | MsG0280010383.01 | 0.861986 | 6.974336e-64 | 2.010237e-60 |
| MsG0180004854.01 | MsG0280010383.01 | 0.831094 | 2.027892e-55 | 2.178267e-52 |
| MsG0180005426.01 | MsG0280010383.01 | 0.853531 | 2.246407e-61 | 4.869101e-58 |
| MsG0180005659.01 | MsG0280010383.01 | 0.819490 | 1.130356e-52 | 8.711077e-50 |
| MsG0180005851.01 | MsG0280010383.01 | 0.815124 | 1.085448e-51 | 7.419184e-49 |
| MsG0180006082.01 | MsG0280010383.01 | 0.848449 | 6.088027e-60 | 1.117709e-56 |
| MsG0280006406.01 | MsG0280010383.01 | 0.805539 | 1.271128e-49 | 6.742291e-47 |
| MsG0280006424.01 | MsG0280010383.01 | 0.883557 | 4.057095e-71 | 2.584885e-67 |
| MsG0280006483.01 | MsG0280010383.01 | 0.803285 | 3.749141e-49 | 1.876594e-46 |
| MsG0280006819.01 | MsG0280010383.01 | 0.810041 | 1.403712e-50 | 8.374171e-48 |
| MsG0280006836.01 | MsG0280010383.01 | 0.834521 | 2.856406e-56 | 3.398443e-53 |
| MsG0280006993.01 | MsG0280010383.01 | 0.821189 | 4.608946e-53 | 3.723965e-50 |
| MsG0280007634.01 | MsG0280010383.01 | 0.844973 | 5.423209e-59 | 8.904760e-56 |
| MsG0280009372.01 | MsG0280010383.01 | 0.828434 | 9.008788e-55 | 8.953715e-52 |
| MsG0280009375.01 | MsG0280010383.01 | 0.845749 | 3.343899e-59 | 5.629342e-56 |
| MsG0280010383.01 | MsG0280010495.01 | 0.842501 | 2.488031e-58 | 3.779973e-55 |
| MsG0280010383.01 | MsG0280010801.01 | 0.812332 | 4.471437e-51 | 2.835100e-48 |
| MsG0280010383.01 | MsG0280010995.01 | 0.805209 | 1.491083e-49 | 7.842259e-47 |
| MsG0280010383.01 | MsG0280011308.01 | 0.832459 | 9.337755e-56 | 1.044357e-52 |
| MsG0280010383.01 | MsG0380011659.01 | 0.815136 | 1.079175e-51 | 7.378451e-49 |
| MsG0280010383.01 | MsG0380012073.01 | 0.818943 | 1.505481e-52 | 1.142872e-49 |
| MsG0280010383.01 | MsG0380012566.01 | 0.809508 | 1.828148e-50 | 1.075337e-47 |
| MsG0280010383.01 | MsG0380013178.01 | 0.806983 | 6.310016e-50 | 3.473254e-47 |
| MsG0280010383.01 | MsG0380015027.01 | 0.802782 | 4.765330e-49 | 2.354912e-46 |
| MsG0280010383.01 | MsG0380016067.01 | 0.809653 | 1.701122e-50 | 1.004548e-47 |
| MsG0280010383.01 | MsG0380017382.01 | 0.858044 | 1.079121e-62 | 2.717932e-59 |
| MsG0280010383.01 | MsG0480018477.01 | 0.842672 | 2.240722e-58 | 3.422141e-55 |
| MsG0280010383.01 | MsG0480020959.01 | 0.834685 | 2.598465e-56 | 3.106106e-53 |
| MsG0280010383.01 | MsG0480021006.01 | 0.839173 | 1.855893e-57 | 2.542033e-54 |
| MsG0280010383.01 | MsG0480021448.01 | 0.807631 | 4.600686e-50 | 2.575331e-47 |
| MsG0280010383.01 | MsG0480021453.01 | 0.825510 | 4.507508e-54 | 4.116778e-51 |
| MsG0280010383.01 | MsG0480023149.01 | 0.842630 | 2.300170e-58 | 3.508189e-55 |
| MsG0280010383.01 | MsG0480023399.01 | 0.868724 | 5.276900e-66 | 1.929125e-62 |
| MsG0280010383.01 | MsG0480023467.01 | 0.829903 | 3.967473e-55 | 4.116363e-52 |
| MsG0280010383.01 | MsG0480023968.01 | 0.850429 | 1.707500e-60 | 3.343921e-57 |
| MsG0280010383.01 | MsG0580024754.01 | 0.851135 | 1.081047e-60 | 2.166694e-57 |
| MsG0280010383.01 | MsG0580027043.01 | 0.855411 | 6.425881e-62 | 1.482296e-58 |
| MsG0280010383.01 | MsG0580029132.01 | 0.831313 | 1.791373e-55 | 1.936722e-52 |
| MsG0280010383.01 | MsG0680030285.01 | 0.806411 | 8.332789e-50 | 4.519673e-47 |
| MsG0280010383.01 | MsG0680031628.01 | 0.845583 | 3.709055e-59 | 6.209840e-56 |
| MsG0280010383.01 | MsG0680031763.01 | 0.816020 | 6.858328e-52 | 4.804560e-49 |
| MsG0280010383.01 | MsG0680032770.01 | 0.890214 | 1.205624e-73 | 1.004383e-69 |
| MsG0280010383.01 | MsG0680035848.01 | 0.823070 | 1.687950e-53 | 1.438446e-50 |
| MsG0280010383.01 | MsG0780036240.01 | 0.819962 | 8.817285e-53 | 6.885356e-50 |
| MsG0280010383.01 | MsG0780036546.01 | 0.855160 | 7.601065e-62 | 1.738547e-58 |
| MsG0280010383.01 | MsG0780036547.01 | 0.879688 | 1.016149e-69 | 5.561734e-66 |
| MsG0280010383.01 | MsG0780036822.01 | 0.844330 | 8.083333e-59 | 1.300564e-55 |
| MsG0280010383.01 | MsG0780038400.01 | 0.843505 | 1.344694e-58 | 2.108371e-55 |
| MsG0280010383.01 | MsG0780038587.01 | 0.809877 | 1.522394e-50 | 9.043015e-48 |
| MsG0280010383.01 | MsG0780040338.01 | 0.839677 | 1.372983e-57 | 1.909885e-54 |
| MsG0280010383.01 | MsG0780040782.01 | 0.849574 | 2.962743e-60 | 5.641082e-57 |
| MsG0280010383.01 | MsG0780040900.01 | 0.853030 | 3.127529e-61 | 6.665059e-58 |
| MsG0280010383.01 | MsG0780041223.01 | 0.829485 | 5.014980e-55 | 5.139528e-52 |
| MsG0280010383.01 | MsG0780041224.01 | 0.821053 | 4.954392e-53 | 3.988060e-50 |
| MsG0280010383.01 | MsG0780041295.01 | 0.822753 | 2.001302e-53 | 1.690265e-50 |
| MsG0280010383.01 | MsG0780041462.01 | 0.841404 | 4.851364e-58 | 7.121306e-55 |
| MsG0280010383.01 | MsG0780041519.01 | 0.843286 | 1.538600e-58 | 2.395888e-55 |
| MsG0280010383.01 | MsG0880041967.01 | 0.857544 | 1.518388e-62 | 3.761075e-59 |
| MsG0280010383.01 | MsG0880042125.01 | 0.813158 | 2.948461e-51 | 1.910720e-48 |
| MsG0280010383.01 | MsG0880044711.01 | 0.847326 | 1.241188e-59 | 2.198003e-56 |
| MsG0280010383.01 | MsG0880046177.01 | 0.811102 | 8.282130e-51 | 5.081428e-48 |
| MsG0280010383.01 | MsG0880046444.01 | 0.821141 | 4.728030e-53 | 3.814933e-50 |
| MsG0280010383.01 | MsG0880046575.01 | 0.874788 | 5.137380e-68 | 2.343007e-64 |
| MsG0280010383.01 | MsG0880046631.01 | 0.835087 | 2.058124e-56 | 2.490148e-53 |
| MsG0280010383.01 | MsG0880046879.01 | 0.873965 | 9.766855e-68 | 4.319565e-64 |
| MsG0280010383.01 | MsG0880047427.01 | 0.811097 | 8.302123e-51 | 5.093115e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0280010383.01 | MsG0480022041.01 | PPI |
| MsG0480021288.01 | MsG0280010383.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010383.01.T01 | MTR_6g013210 | 100.000 | 65 | 0 | 0 | 28 | 92 | 1 | 65 | 2.43e-41 | 130 |
| MsG0280010383.01.T01 | MTR_4g081180 | 72.826 | 92 | 16 | 3 | 7 | 92 | 126 | 214 | 1.53e-35 | 120 |
| MsG0280010383.01.T01 | MTR_6g013410 | 81.538 | 65 | 11 | 1 | 28 | 92 | 38 | 101 | 1.46e-30 | 104 |
| MsG0280010383.01.T01 | MTR_8g089765 | 71.667 | 60 | 17 | 0 | 28 | 87 | 1 | 60 | 2.16e-24 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010383.01.T01 | AT5G03850 | 90.769 | 65 | 5 | 1 | 28 | 92 | 1 | 64 | 4.11e-35 | 114 |
| MsG0280010383.01.T01 | AT3G10090 | 90.769 | 65 | 5 | 1 | 28 | 92 | 1 | 64 | 4.11e-35 | 114 |
| MsG0280010383.01.T01 | AT5G64140 | 89.231 | 65 | 6 | 1 | 28 | 92 | 1 | 64 | 3.23e-34 | 112 |
Find 29 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTGGACAATCCTTGATC+AGG | 0.417303 | 2:-68840030 | MsG0280010383.01.T01:CDS |
| GCTGTTGTTGTGAAAGTTAT+GGG | 0.420809 | 2:-68838094 | MsG0280010383.01.T01:CDS |
| AGGATGTCTCCCTCCCTAAC+TGG | 0.425936 | 2:+68837983 | None:intergenic |
| TGCTGTTGTTGTGAAAGTTA+TGG | 0.441002 | 2:-68838095 | MsG0280010383.01.T01:CDS |
| TTATGGGTCGTACTGGATCC+AGG | 0.451262 | 2:-68838078 | MsG0280010383.01.T01:CDS |
| AACCTGAGTGACTTGTCCCC+TGG | 0.461687 | 2:+68838060 | None:intergenic |
| GAATGTGAAGGGACCAGTTA+GGG | 0.464736 | 2:-68837996 | MsG0280010383.01.T01:CDS |
| GGAATGTGAAGGGACCAGTT+AGG | 0.473428 | 2:-68837997 | MsG0280010383.01.T01:CDS |
| GGGGAGACATATTCCGACTT+TGG | 0.485899 | 2:-68840009 | MsG0280010383.01.T01:intron |
| TCTCAGACTCGAGGAGGGTA+AGG | 0.488938 | 2:+68837963 | None:intergenic |
| GAATATGTCTCCCCTGATCA+AGG | 0.522079 | 2:+68840018 | MsG0280010382.01.T01:intron |
| GTGAAAGTTATGGGTCGTAC+TGG | 0.530087 | 2:-68838085 | MsG0280010383.01.T01:CDS |
| ACCTGGACAATCCTTGATCA+GGG | 0.533449 | 2:-68840029 | MsG0280010383.01.T01:CDS |
| TGAACTCAACATACCAAAGT+CGG | 0.549702 | 2:+68839996 | MsG0280010382.01.T01:intron |
| GAATTCCTCGCAATAGTACC+TGG | 0.552253 | 2:-68840046 | MsG0280010383.01.T01:CDS |
| CCCCTGATCAAGGATTGTCC+AGG | 0.575343 | 2:+68840028 | MsG0280010382.01.T01:intron |
| TGTGAAGGGACCAGTTAGGG+AGG | 0.582336 | 2:-68837993 | MsG0280010383.01.T01:CDS |
| ATCAGAATCGTCACATCATG+AGG | 0.584464 | 2:-68838018 | MsG0280010383.01.T01:CDS |
| TTGCTTCTCTCTCAGACTCG+AGG | 0.586554 | 2:+68837954 | None:intergenic |
| CTTCTCTCTCAGACTCGAGG+AGG | 0.606831 | 2:+68837957 | None:intergenic |
| TATGGGTCGTACTGGATCCA+GGG | 0.613108 | 2:-68838077 | MsG0280010383.01.T01:CDS |
| TCACATCATGAGGAATGTGA+AGG | 0.626309 | 2:-68838008 | MsG0280010383.01.T01:CDS |
| CACATCATGAGGAATGTGAA+GGG | 0.632733 | 2:-68838007 | MsG0280010383.01.T01:CDS |
| ATCCAGGGGACAAGTCACTC+AGG | 0.638739 | 2:-68838062 | MsG0280010383.01.T01:CDS |
| TTCTCTCTCAGACTCGAGGA+GGG | 0.644799 | 2:+68837958 | None:intergenic |
| GTGAAGGGACCAGTTAGGGA+GGG | 0.647685 | 2:-68837992 | MsG0280010383.01.T01:CDS |
| ATGGGTCGTACTGGATCCAG+GGG | 0.674814 | 2:-68838076 | MsG0280010383.01.T01:CDS |
| ATTGTCCAGGTACTATTGCG+AGG | 0.675328 | 2:+68840041 | MsG0280010382.01.T01:intron |
| CCTGGACAATCCTTGATCAG+GGG | 0.690809 | 2:-68840028 | MsG0280010383.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTTGATTTTTTCA+TGG | - | Chr2:68839093-68839112 | MsG0280010383.01.T01:intron | 10.0% |
| !! | AAATTATGATTTAAATAGTC+TGG | - | Chr2:68839734-68839753 | MsG0280010383.01.T01:intron | 15.0% |
| !! | ATTTGAACAAATTTAAGAAT+AGG | + | Chr2:68838128-68838147 | None:intergenic | 15.0% |
| !!! | ATAAATAAAGTTTTGTTGAA+GGG | + | Chr2:68838376-68838395 | None:intergenic | 15.0% |
| !!! | TATAAATAAAGTTTTGTTGA+AGG | + | Chr2:68838377-68838396 | None:intergenic | 15.0% |
| !! | AGTTAAAAAAGTCATTTCTA+AGG | + | Chr2:68839426-68839445 | None:intergenic | 20.0% |
| !! | ATAGAGGAATAACATTTATT+TGG | - | Chr2:68838810-68838829 | MsG0280010383.01.T01:intron | 20.0% |
| !! | GCTAAAAATATAGATCAATA+AGG | + | Chr2:68839028-68839047 | None:intergenic | 20.0% |
| !! | TAGAGGAATAACATTTATTT+GGG | - | Chr2:68838811-68838830 | MsG0280010383.01.T01:intron | 20.0% |
| !!! | ATCAACTTCACTTTATTTTT+TGG | + | Chr2:68839701-68839720 | MsG0280010382.01.T01:CDS | 20.0% |
| !!! | TAAATAAAGTTTTGTTGAAG+GGG | + | Chr2:68838375-68838394 | None:intergenic | 20.0% |
| !!! | TTTTAAACAAATTGCTTATG+TGG | + | Chr2:68838510-68838529 | None:intergenic | 20.0% |
| ! | AAATCTGAATAAGGAAAGTT+AGG | - | Chr2:68838891-68838910 | MsG0280010383.01.T01:intron | 25.0% |
| ! | AACTTTCCTTATTCAGATTT+GGG | + | Chr2:68838891-68838910 | None:intergenic | 25.0% |
| ! | AATCTGAATAAGGAAAGTTA+GGG | - | Chr2:68838892-68838911 | MsG0280010383.01.T01:intron | 25.0% |
| ! | ACACATTCACAATTGTTAAT+AGG | + | Chr2:68839859-68839878 | MsG0280010382.01.T01:intron | 25.0% |
| ! | CCAATATTAATTACTCTACA+TGG | + | Chr2:68838218-68838237 | None:intergenic | 25.0% |
| ! | CCATGTAGAGTAATTAATAT+TGG | - | Chr2:68838215-68838234 | MsG0280010383.01.T01:intron | 25.0% |
| ! | TAACTTTCCTTATTCAGATT+TGG | + | Chr2:68838892-68838911 | None:intergenic | 25.0% |
| ! | TATATACCCAAATCTGAATA+AGG | - | Chr2:68838882-68838901 | MsG0280010383.01.T01:intron | 25.0% |
| ! | TCAACATGATAGAAAAAAGA+AGG | - | Chr2:68838148-68838167 | MsG0280010383.01.T01:intron | 25.0% |
| ! | TTATTCCTCTATTCAGAAAA+TGG | + | Chr2:68838802-68838821 | None:intergenic | 25.0% |
| ! | TTGAGTTCAAAATACAAAGT+CGG | - | Chr2:68838025-68838044 | MsG0280010383.01.T01:CDS | 25.0% |
| ! | TTGATTGCTTATATTGTGTT+TGG | - | Chr2:68839650-68839669 | MsG0280010383.01.T01:intron | 25.0% |
| ! | TTGGGTATATATAGTAATGA+TGG | + | Chr2:68838873-68838892 | None:intergenic | 25.0% |
| !! | ACCAAAAAAGTACAAATTCA+AGG | - | Chr2:68838741-68838760 | MsG0280010383.01.T01:intron | 25.0% |
| !! | AGTAATGATGGTTAGATTTT+TGG | + | Chr2:68838861-68838880 | None:intergenic | 25.0% |
| !! | CCAAAAAAGTACAAATTCAA+GGG | - | Chr2:68838742-68838761 | MsG0280010383.01.T01:intron | 25.0% |
| !! | GTAATGATGGTTAGATTTTT+GGG | + | Chr2:68838860-68838879 | None:intergenic | 25.0% |
| !! | GTTTGATTTCAACAAATTCA+TGG | - | Chr2:68838071-68838090 | MsG0280010383.01.T01:CDS | 25.0% |
| !! | TGATTGCTATTAATTGTGTT+TGG | - | Chr2:68839457-68839476 | MsG0280010383.01.T01:intron | 25.0% |
| !! | TTTAAAATGTGTGAAAGATG+AGG | - | Chr2:68839277-68839296 | MsG0280010383.01.T01:intron | 25.0% |
| !! | TTTTCGAATAACAATCATGA+AGG | + | Chr2:68838352-68838371 | None:intergenic | 25.0% |
| !!! | GATAAAAAAGTGTTTTTCAG+TGG | - | Chr2:68839770-68839789 | MsG0280010383.01.T01:intron | 25.0% |
| !!! | GATTTTTTCATGGTTGATTT+AGG | - | Chr2:68839103-68839122 | MsG0280010383.01.T01:intron | 25.0% |
| !!! | TTTTTGGTATTAACCTTCAT+GGG | + | Chr2:68838729-68838748 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTATTAACCTTCA+TGG | + | Chr2:68838730-68838749 | None:intergenic | 25.0% |
| AAACAACTTAATCAGAAGAC+TGG | + | Chr2:68838055-68838074 | None:intergenic | 30.0% | |
| AGAATTTCTACAATGGTGAT+TGG | + | Chr2:68838185-68838204 | None:intergenic | 30.0% | |
| CCAACCCATAAATAAGAATA+AGG | - | Chr2:68838834-68838853 | MsG0280010383.01.T01:intron | 30.0% | |
| GTCGAGATGTAAGTAAAATA+TGG | + | Chr2:68838680-68838699 | None:intergenic | 30.0% | |
| TATTAACCTTCATGGGAAAA+GGG | + | Chr2:68838722-68838741 | None:intergenic | 30.0% | |
| ! | AATTACTCTACATGGATTGA+AGG | + | Chr2:68838210-68838229 | None:intergenic | 30.0% |
| ! | CCTTATTCTTATTTATGGGT+TGG | + | Chr2:68838837-68838856 | None:intergenic | 30.0% |
| ! | GAGGAATTCAATGTTTTGTA+TGG | + | Chr2:68837950-68837969 | None:intergenic | 30.0% |
| ! | TAAAATGGAAAGTGCAGAAT+CGG | + | Chr2:68838965-68838984 | None:intergenic | 30.0% |
| !! | CAAATTCATGGTTTTGCAAT+TGG | - | Chr2:68838083-68838102 | MsG0280010383.01.T01:CDS | 30.0% |
| !! | TGGGCCTTATTCTTATTTAT+GGG | + | Chr2:68838841-68838860 | None:intergenic | 30.0% |
| !! | TTGGGCCTTATTCTTATTTA+TGG | + | Chr2:68838842-68838861 | None:intergenic | 30.0% |
| !! | TTTTCATGGTTGATTTAGGT+TGG | - | Chr2:68839107-68839126 | MsG0280010383.01.T01:intron | 30.0% |
| !!! | CCCTTGAATTTGTACTTTTT+TGG | + | Chr2:68838745-68838764 | None:intergenic | 30.0% |
| !!! | TATTTTTTACCTTCCTAGCT+AGG | - | Chr2:68838414-68838433 | MsG0280010383.01.T01:intron | 30.0% |
| CAATTGTTAATAGGAGAGCA+AGG | + | Chr2:68839850-68839869 | MsG0280010382.01.T01:intron | 35.0% | |
| CATGAAGGAGATAAAGTTGT+TGG | + | Chr2:68838337-68838356 | None:intergenic | 35.0% | |
| CTTTACTAGACAATTGTGTG+AGG | + | Chr2:68838611-68838630 | None:intergenic | 35.0% | |
| GCTGTTGTTGTGAAAGTTAT+GGG | - | Chr2:68839913-68839932 | MsG0280010383.01.T01:intron | 35.0% | |
| GTATTAACCTTCATGGGAAA+AGG | + | Chr2:68838723-68838742 | None:intergenic | 35.0% | |
| GTGCATTTGTAGAAAGTCAA+TGG | + | Chr2:68838468-68838487 | None:intergenic | 35.0% | |
| TCAACAAATTAAGCTGAAGC+TGG | + | Chr2:68839362-68839381 | None:intergenic | 35.0% | |
| TGAACTCAACATACCAAAGT+CGG | + | Chr2:68838014-68838033 | None:intergenic | 35.0% | |
| TGCTGTTGTTGTGAAAGTTA+TGG | - | Chr2:68839912-68839931 | MsG0280010383.01.T01:intron | 35.0% | |
| ! | CTTGAAGTTGGTTGCTAAAA+TGG | + | Chr2:68838980-68838999 | None:intergenic | 35.0% |
| ! | GTGAACCATTTTCTGAATAG+AGG | - | Chr2:68838794-68838813 | MsG0280010383.01.T01:intron | 35.0% |
| ! | GTTGCTTCTTGTTATGTTGT+CGG | + | Chr2:68838289-68838308 | None:intergenic | 35.0% |
| ! | TCAGGTTAGAGTGAAGTTTT+TGG | - | Chr2:68839963-68839982 | MsG0280010383.01.T01:intron | 35.0% |
| !! | ATTCATGGTTTTGCAATTGG+AGG | - | Chr2:68838086-68838105 | MsG0280010383.01.T01:CDS | 35.0% |
| ATCAGAATCGTCACATCATG+AGG | - | Chr2:68839989-68840008 | MsG0280010383.01.T01:intron | 40.0% | |
| CACATCATGAGGAATGTGAA+GGG | - | Chr2:68840000-68840019 | MsG0280010383.01.T01:intron | 40.0% | |
| GAAGGCGAGAATTTCTACAA+TGG | + | Chr2:68838192-68838211 | None:intergenic | 40.0% | |
| GAGAGAAACGAACTTGAAGT+TGG | + | Chr2:68838992-68839011 | None:intergenic | 40.0% | |
| TCACATCATGAGGAATGTGA+AGG | - | Chr2:68839999-68840018 | MsG0280010383.01.T01:intron | 40.0% | |
| ACCTGGACAATCCTTGATCA+GGG | - | Chr2:68837978-68837997 | MsG0280010383.01.T01:CDS | 45.0% | |
| ATGTGTGTGTTTGAGCAGGA+TGG | - | Chr2:68839873-68839892 | MsG0280010383.01.T01:intron | 45.0% | |
| ATTGTCCAGGTACTATTGCG+AGG | + | Chr2:68837969-68837988 | None:intergenic | 45.0% | |
| GAATATGTCTCCCCTGATCA+AGG | + | Chr2:68837992-68838011 | None:intergenic | 45.0% | |
| GAATGTGAAGGGACCAGTTA+GGG | - | Chr2:68840011-68840030 | MsG0280010383.01.T01:CDS | 45.0% | |
| GAATTCCTCGCAATAGTACC+TGG | - | Chr2:68837961-68837980 | MsG0280010383.01.T01:CDS | 45.0% | |
| GTGAAAGTTATGGGTCGTAC+TGG | - | Chr2:68839922-68839941 | MsG0280010383.01.T01:intron | 45.0% | |
| GTGAATGTGTGTGTTTGAGC+AGG | - | Chr2:68839869-68839888 | MsG0280010383.01.T01:intron | 45.0% | |
| GTTGTACTTCCTAGCTAGGA+AGG | + | Chr2:68838426-68838445 | None:intergenic | 45.0% | |
| TACCTGGACAATCCTTGATC+AGG | - | Chr2:68837977-68837996 | MsG0280010383.01.T01:CDS | 45.0% | |
| TGGATGGTAGGAGACAAGAA+TGG | + | Chr2:68838249-68838268 | None:intergenic | 45.0% | |
| TGGTAGGAGACAAGAATGGT+TGG | + | Chr2:68838245-68838264 | None:intergenic | 45.0% | |
| ! | CCTAGCTAGGAAGTACAACA+AGG | - | Chr2:68838427-68838446 | MsG0280010383.01.T01:intron | 45.0% |
| ! | CCTTGTTGTACTTCCTAGCT+AGG | + | Chr2:68838430-68838449 | None:intergenic | 45.0% |
| ! | GCTTCTTGTTATGTTGTCGG+TGG | + | Chr2:68838286-68838305 | None:intergenic | 45.0% |
| ! | TCAAGACCCTTTTCCCATGA+AGG | - | Chr2:68838713-68838732 | MsG0280010383.01.T01:intron | 45.0% |
| !! | AAATAATGATTTATTAAATA+TGG | + | Chr2:68838587-68838606 | None:intergenic | 5.0% |
| !! | AATAATGATTTATTAAATAT+GGG | + | Chr2:68838586-68838605 | None:intergenic | 5.0% |
| !! | TCAAAATAAAAAAATTAATA+TGG | + | Chr2:68839085-68839104 | None:intergenic | 5.0% |
| CCTGGACAATCCTTGATCAG+GGG | - | Chr2:68837979-68837998 | MsG0280010383.01.T01:CDS | 50.0% | |
| GGAATGTGAAGGGACCAGTT+AGG | - | Chr2:68840010-68840029 | MsG0280010383.01.T01:CDS | 50.0% | |
| GGGGAGACATATTCCGACTT+TGG | - | Chr2:68837998-68838017 | MsG0280010383.01.T01:CDS | 50.0% | |
| TACCATCCACCGTTTAGCAG+AGG | - | Chr2:68838260-68838279 | MsG0280010383.01.T01:intron | 50.0% | |
| TATGGGTCGTACTGGATCCA+GGG | - | Chr2:68839930-68839949 | MsG0280010383.01.T01:intron | 50.0% | |
| TCTGCTAAACGGTGGATGGT+AGG | + | Chr2:68838261-68838280 | None:intergenic | 50.0% | |
| TTATGGGTCGTACTGGATCC+AGG | - | Chr2:68839929-68839948 | MsG0280010383.01.T01:intron | 50.0% | |
| TTCTCTCTCAGACTCGAGGA+GGG | + | Chr2:68840052-68840071 | MsG0280010382.01.T01:intron | 50.0% | |
| TTGCTTCTCTCTCAGACTCG+AGG | + | Chr2:68840056-68840075 | MsG0280010382.01.T01:intron | 50.0% | |
| AGGATGTCTCCCTCCCTAAC+TGG | + | Chr2:68840027-68840046 | MsG0280010382.01.T01:intron | 55.0% | |
| ATCCAGGGGACAAGTCACTC+AGG | - | Chr2:68839945-68839964 | MsG0280010383.01.T01:intron | 55.0% | |
| ATGGGTCGTACTGGATCCAG+GGG | - | Chr2:68839931-68839950 | MsG0280010383.01.T01:intron | 55.0% | |
| CCCCTGATCAAGGATTGTCC+AGG | + | Chr2:68837982-68838001 | None:intergenic | 55.0% | |
| CTTCTCTCTCAGACTCGAGG+AGG | + | Chr2:68840053-68840072 | MsG0280010382.01.T01:intron | 55.0% | |
| GCGAAGAAGCTAGCTGCGTA+TGG | + | Chr2:68838927-68838946 | None:intergenic | 55.0% | |
| GTGAAGGGACCAGTTAGGGA+GGG | - | Chr2:68840015-68840034 | MsG0280010383.01.T01:CDS | 55.0% | |
| TCTCAGACTCGAGGAGGGTA+AGG | + | Chr2:68840047-68840066 | MsG0280010382.01.T01:intron | 55.0% | |
| TGTCGGTGGCCTCTGCTAAA+CGG | + | Chr2:68838272-68838291 | None:intergenic | 55.0% | |
| TGTGAAGGGACCAGTTAGGG+AGG | - | Chr2:68840014-68840033 | MsG0280010383.01.T01:CDS | 55.0% | |
| ! | AACCTGAGTGACTTGTCCCC+TGG | + | Chr2:68839950-68839969 | MsG0280010382.01.T01:intron | 55.0% |
| ! | GGAAAGTGCAGAATCGGCGT+GGG | + | Chr2:68838959-68838978 | None:intergenic | 55.0% |
| ! | TGGAAAGTGCAGAATCGGCG+TGG | + | Chr2:68838960-68838979 | None:intergenic | 55.0% |
| GGCCTCTGCTAAACGGTGGA+TGG | + | Chr2:68838265-68838284 | None:intergenic | 60.0% | |
| CGGTGGCCTCTGCTAAACGG+TGG | + | Chr2:68838269-68838288 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 68837940 | 68840089 | 68837940 | ID=MsG0280010383.01;Name=MsG0280010383.01 |
| Chr2 | mRNA | 68837940 | 68840089 | 68837940 | ID=MsG0280010383.01.T01;Parent=MsG0280010383.01;Name=MsG0280010383.01.T01;_AED=0.50;_eAED=0.66;_QI=0|0|0|1|0|0|2|0|92 |
| Chr2 | exon | 68840010 | 68840089 | 68840010 | ID=MsG0280010383.01.T01:exon:14757;Parent=MsG0280010383.01.T01 |
| Chr2 | exon | 68837940 | 68838138 | 68837940 | ID=MsG0280010383.01.T01:exon:14756;Parent=MsG0280010383.01.T01 |
| Chr2 | CDS | 68840010 | 68840089 | 68840010 | ID=MsG0280010383.01.T01:cds;Parent=MsG0280010383.01.T01 |
| Chr2 | CDS | 68837940 | 68838138 | 68837940 | ID=MsG0280010383.01.T01:cds;Parent=MsG0280010383.01.T01 |
| Gene Sequence |
| Protein sequence |
