Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003117.01.T01 | XP_013467694.1 | 100 | 207 | 0 | 0 | 1 | 207 | 33 | 239 | 1.37E-149 | 425 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003117.01.T01 | O65731 | 94.388 | 196 | 10 | 1 | 13 | 207 | 2 | 197 | 3.66E-134 | 377 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003117.01.T01 | A0A072VJE7 | 100.000 | 207 | 0 | 0 | 1 | 207 | 33 | 239 | 6.55e-150 | 425 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048135.01 | MsG0180003117.01 | 0.833297 | 5.782523e-56 | 6.631309e-53 |
MsG0080048428.01 | MsG0180003117.01 | 0.803240 | 3.830883e-49 | 1.915327e-46 |
MsG0080048971.01 | MsG0180003117.01 | 0.843999 | 9.919627e-59 | 1.579583e-55 |
MsG0180000139.01 | MsG0180003117.01 | 0.888682 | 4.755627e-73 | 3.720546e-69 |
MsG0180000339.01 | MsG0180003117.01 | 0.844504 | 7.258681e-59 | 1.174302e-55 |
MsG0180000614.01 | MsG0180003117.01 | 0.828975 | 6.668436e-55 | 6.731915e-52 |
MsG0180001141.01 | MsG0180003117.01 | 0.814955 | 1.183574e-51 | 8.053018e-49 |
MsG0180002023.01 | MsG0180003117.01 | 0.820584 | 6.349461e-53 | 5.044082e-50 |
MsG0180002458.01 | MsG0180003117.01 | 0.847032 | 1.494018e-59 | 2.621117e-56 |
MsG0180003073.01 | MsG0180003117.01 | 0.814662 | 1.374377e-51 | 9.277660e-49 |
MsG0180003097.01 | MsG0180003117.01 | 0.837903 | 3.949450e-57 | 5.204067e-54 |
MsG0180003117.01 | MsG0180003612.01 | 0.843239 | 1.583267e-58 | 2.461536e-55 |
MsG0180003117.01 | MsG0180003651.01 | 0.832171 | 1.100854e-55 | 1.220674e-52 |
MsG0180003117.01 | MsG0180003793.01 | 0.868024 | 8.876344e-66 | 3.163321e-62 |
MsG0180003117.01 | MsG0180004129.01 | 0.887349 | 1.542694e-72 | 1.143044e-68 |
MsG0180003117.01 | MsG0180004130.01 | 0.896177 | 4.738758e-76 | 5.068818e-72 |
MsG0180003117.01 | MsG0180004463.01 | 0.852165 | 5.520375e-61 | 1.143543e-57 |
MsG0180003117.01 | MsG0180004481.01 | 0.836210 | 1.069318e-56 | 1.338606e-53 |
MsG0180003117.01 | MsG0180004482.01 | 0.846627 | 1.928568e-59 | 3.339864e-56 |
MsG0180003117.01 | MsG0180004509.01 | 0.839585 | 1.450695e-57 | 2.012362e-54 |
MsG0180003117.01 | MsG0180004548.01 | 0.846274 | 2.406868e-59 | 4.120574e-56 |
MsG0180003117.01 | MsG0180004656.01 | 0.814950 | 1.186497e-51 | 8.071675e-49 |
MsG0180003117.01 | MsG0180004854.01 | 0.836185 | 1.085192e-56 | 1.357423e-53 |
MsG0180003117.01 | MsG0180005426.01 | 0.884305 | 2.148032e-71 | 1.410315e-67 |
MsG0180003117.01 | MsG0180005659.01 | 0.904431 | 1.236108e-79 | 1.911688e-75 |
MsG0180003117.01 | MsG0180005763.01 | 0.819399 | 1.185474e-52 | 9.112336e-50 |
MsG0180003117.01 | MsG0180005851.01 | 0.871704 | 5.578618e-67 | 2.272100e-63 |
MsG0180003117.01 | MsG0180005957.01 | 0.845243 | 4.586531e-59 | 7.595681e-56 |
MsG0180003117.01 | MsG0180006082.01 | 0.807370 | 5.224145e-50 | 2.904606e-47 |
MsG0180003117.01 | MsG0280006406.01 | 0.892081 | 2.205358e-74 | 1.985095e-70 |
MsG0180003117.01 | MsG0280006424.01 | 0.813855 | 2.072240e-51 | 1.368610e-48 |
MsG0180003117.01 | MsG0280006819.01 | 0.816811 | 4.562437e-52 | 3.265954e-49 |
MsG0180003117.01 | MsG0280006836.01 | 0.806678 | 7.318979e-50 | 3.996834e-47 |
MsG0180003117.01 | MsG0280006993.01 | 0.858659 | 7.077760e-63 | 1.819881e-59 |
MsG0180003117.01 | MsG0280007164.01 | 0.800659 | 1.299506e-48 | 6.084911e-46 |
MsG0180003117.01 | MsG0280007222.01 | 0.828074 | 1.100604e-54 | 1.082425e-51 |
MsG0180003117.01 | MsG0280007690.01 | 0.843996 | 9.936268e-59 | 1.582066e-55 |
MsG0180003117.01 | MsG0280008118.01 | 0.842227 | 2.941403e-58 | 4.429937e-55 |
MsG0180003117.01 | MsG0280008239.01 | 0.800086 | 1.699640e-48 | 7.843616e-46 |
MsG0180003117.01 | MsG0280008283.01 | 0.878068 | 3.784949e-69 | 1.948280e-65 |
MsG0180003117.01 | MsG0280009141.01 | 0.811027 | 8.597512e-51 | 5.264835e-48 |
MsG0180003117.01 | MsG0280009230.01 | 0.861816 | 7.862327e-64 | 2.252890e-60 |
MsG0180003117.01 | MsG0280009372.01 | 0.851647 | 7.743191e-61 | 1.577759e-57 |
MsG0180003117.01 | MsG0280009375.01 | 0.910445 | 1.858537e-82 | 3.795957e-78 |
MsG0180003117.01 | MsG0280009716.01 | 0.839771 | 1.297778e-57 | 1.810611e-54 |
MsG0180003117.01 | MsG0280010383.01 | 0.825854 | 3.735952e-54 | 3.446118e-51 |
MsG0180003117.01 | MsG0280010495.01 | 0.811348 | 7.321436e-51 | 4.521020e-48 |
MsG0180003117.01 | MsG0280010776.01 | 0.834947 | 2.232086e-56 | 2.689726e-53 |
MsG0180003117.01 | MsG0280010801.01 | 0.815778 | 7.765496e-52 | 5.404374e-49 |
MsG0180003117.01 | MsG0280010995.01 | 0.819718 | 1.002731e-52 | 7.776835e-50 |
MsG0180003117.01 | MsG0280011387.01 | 0.879383 | 1.303208e-69 | 7.051604e-66 |
MsG0180003117.01 | MsG0380012073.01 | 0.820607 | 6.273799e-53 | 4.987028e-50 |
MsG0180003117.01 | MsG0380012108.01 | 0.877016 | 8.812235e-69 | 4.363451e-65 |
MsG0180003117.01 | MsG0380012310.01 | 0.815158 | 1.066736e-51 | 7.298000e-49 |
MsG0180003117.01 | MsG0380012566.01 | 0.835851 | 1.318886e-56 | 1.632863e-53 |
MsG0180003117.01 | MsG0380013178.01 | 0.856427 | 3.241276e-62 | 7.734079e-59 |
MsG0180003117.01 | MsG0380014577.01 | 0.813725 | 2.213591e-51 | 1.456872e-48 |
MsG0180003117.01 | MsG0380015027.01 | 0.831837 | 1.330777e-55 | 1.461495e-52 |
MsG0180003117.01 | MsG0380015164.01 | 0.802050 | 6.742973e-49 | 3.270538e-46 |
MsG0180003117.01 | MsG0380016688.01 | 0.814970 | 1.174752e-51 | 7.996211e-49 |
MsG0180003117.01 | MsG0380017788.01 | 0.852327 | 4.965309e-61 | 1.033904e-57 |
MsG0180003117.01 | MsG0380017857.01 | 0.839442 | 1.581021e-57 | 2.183668e-54 |
MsG0180003117.01 | MsG0480018163.01 | 0.800477 | 1.415191e-48 | 6.595810e-46 |
MsG0180003117.01 | MsG0480018252.01 | 0.836074 | 1.158099e-56 | 1.443589e-53 |
MsG0180003117.01 | MsG0480018477.01 | 0.859203 | 4.866086e-63 | 1.274832e-59 |
MsG0180003117.01 | MsG0480018894.01 | 0.831058 | 2.070207e-55 | 2.221358e-52 |
MsG0180003117.01 | MsG0480020959.01 | 0.862373 | 5.307615e-64 | 1.550914e-60 |
MsG0180003117.01 | MsG0480021006.01 | 0.875723 | 2.460902e-68 | 1.161435e-64 |
MsG0180003117.01 | MsG0480021164.01 | 0.831371 | 1.733543e-55 | 1.877478e-52 |
MsG0180003117.01 | MsG0480021393.01 | 0.818331 | 2.072764e-52 | 1.546989e-49 |
MsG0180003117.01 | MsG0480021904.01 | 0.889549 | 2.192137e-73 | 1.776802e-69 |
MsG0180003117.01 | MsG0480022035.01 | 0.820090 | 8.240180e-53 | 6.458193e-50 |
MsG0180003117.01 | MsG0480022164.01 | 0.805416 | 1.348857e-49 | 7.132158e-47 |
MsG0180003117.01 | MsG0480022252.01 | 0.854518 | 1.167133e-61 | 2.613607e-58 |
MsG0180003117.01 | MsG0480022549.01 | 0.806216 | 9.159533e-50 | 4.943775e-47 |
MsG0180003117.01 | MsG0480022791.01 | 0.836068 | 1.161941e-56 | 1.448108e-53 |
MsG0180003117.01 | MsG0480023149.01 | 0.848948 | 4.425221e-60 | 8.256837e-57 |
MsG0180003117.01 | MsG0480023968.01 | 0.863627 | 2.174636e-64 | 6.636280e-61 |
MsG0180003117.01 | MsG0580024165.01 | 0.802499 | 5.449461e-49 | 2.673516e-46 |
MsG0180003117.01 | MsG0580024390.01 | 0.866323 | 3.101337e-65 | 1.041080e-61 |
MsG0180003117.01 | MsG0580024544.01 | 0.829289 | 5.593461e-55 | 5.701041e-52 |
MsG0180003117.01 | MsG0580024961.01 | 0.801197 | 1.008615e-48 | 4.787587e-46 |
MsG0180003117.01 | MsG0580025400.01 | 0.864924 | 8.563945e-65 | 2.735249e-61 |
MsG0180003117.01 | MsG0580025421.01 | 0.833812 | 4.301976e-56 | 5.010384e-53 |
MsG0180003117.01 | MsG0580027043.01 | 0.848392 | 6.312937e-60 | 1.156785e-56 |
MsG0180003117.01 | MsG0580029132.01 | 0.816157 | 6.390788e-52 | 4.493834e-49 |
MsG0180003117.01 | MsG0580029283.01 | 0.805152 | 1.532379e-49 | 8.047778e-47 |
MsG0180003117.01 | MsG0680030285.01 | 0.834514 | 2.868920e-56 | 3.412579e-53 |
MsG0180003117.01 | MsG0680030414.01 | 0.842127 | 3.126666e-58 | 4.694498e-55 |
MsG0180003117.01 | MsG0680030721.01 | 0.804328 | 2.276960e-49 | 1.170691e-46 |
MsG0180003117.01 | MsG0680031628.01 | 0.835422 | 1.693293e-56 | 2.069712e-53 |
MsG0180003117.01 | MsG0680032430.01 | 0.807989 | 3.859398e-50 | 2.180795e-47 |
MsG0180003117.01 | MsG0680032770.01 | 0.811671 | 6.230745e-51 | 3.880360e-48 |
MsG0180003117.01 | MsG0680035704.01 | 0.805805 | 1.118098e-49 | 5.971444e-47 |
MsG0180003117.01 | MsG0680035854.01 | 0.819585 | 1.074922e-52 | 8.306193e-50 |
MsG0180003117.01 | MsG0780036240.01 | 0.883212 | 5.432135e-71 | 3.412256e-67 |
MsG0180003117.01 | MsG0780036547.01 | 0.822690 | 2.069807e-53 | 1.744924e-50 |
MsG0180003117.01 | MsG0780036705.01 | 0.807882 | 4.067928e-50 | 2.292014e-47 |
MsG0180003117.01 | MsG0780036813.01 | 0.819578 | 1.078780e-52 | 8.334417e-50 |
MsG0180003117.01 | MsG0780036822.01 | 0.800857 | 1.183671e-48 | 5.570615e-46 |
MsG0180003117.01 | MsG0780036964.01 | 0.806375 | 8.481877e-50 | 4.596273e-47 |
MsG0180003117.01 | MsG0780038400.01 | 0.868052 | 8.696049e-66 | 3.102233e-62 |
MsG0180003117.01 | MsG0780038443.01 | 0.808564 | 2.911311e-50 | 1.670074e-47 |
MsG0180003117.01 | MsG0780038587.01 | 0.818888 | 1.549779e-52 | 1.174628e-49 |
MsG0180003117.01 | MsG0780038645.01 | 0.806147 | 9.473541e-50 | 5.103946e-47 |
MsG0180003117.01 | MsG0780040338.01 | 0.849054 | 4.135626e-60 | 7.743699e-57 |
MsG0180003117.01 | MsG0780040900.01 | 0.800630 | 1.316720e-48 | 6.161044e-46 |
MsG0180003117.01 | MsG0780041137.01 | 0.811552 | 6.611187e-51 | 4.104761e-48 |
MsG0180003117.01 | MsG0780041223.01 | 0.841714 | 4.018933e-58 | 5.955565e-55 |
MsG0180003117.01 | MsG0780041224.01 | 0.811782 | 5.894229e-51 | 3.681781e-48 |
MsG0180003117.01 | MsG0780041402.01 | 0.827850 | 1.245647e-54 | 1.217091e-51 |
MsG0180003117.01 | MsG0780041462.01 | 0.809380 | 1.946997e-50 | 1.141420e-47 |
MsG0180003117.01 | MsG0780041519.01 | 0.849408 | 3.296465e-60 | 6.242886e-57 |
MsG0180003117.01 | MsG0780041688.01 | 0.826980 | 2.014359e-54 | 1.918802e-51 |
MsG0180003117.01 | MsG0880042129.01 | 0.810399 | 1.175164e-50 | 7.076159e-48 |
MsG0180003117.01 | MsG0880042294.01 | 0.816555 | 5.204989e-52 | 3.699965e-49 |
MsG0180003117.01 | MsG0880042314.01 | 0.814144 | 1.789416e-51 | 1.191136e-48 |
MsG0180003117.01 | MsG0880042581.01 | 0.863957 | 1.717116e-64 | 5.300755e-61 |
MsG0180003117.01 | MsG0880043592.01 | 0.816062 | 6.711474e-52 | 4.707178e-49 |
MsG0180003117.01 | MsG0880044711.01 | 0.812804 | 3.525118e-51 | 2.262842e-48 |
MsG0180003117.01 | MsG0880046122.01 | 0.803906 | 2.787000e-49 | 1.417568e-46 |
MsG0180003117.01 | MsG0880046177.01 | 0.812167 | 4.857973e-51 | 3.066281e-48 |
MsG0180003117.01 | MsG0880046321.01 | 0.841324 | 5.092308e-58 | 7.455108e-55 |
MsG0180003117.01 | MsG0880046328.01 | 0.855183 | 7.486734e-62 | 1.713607e-58 |
MsG0180003117.01 | MsG0880046444.01 | 0.801774 | 7.682701e-49 | 3.700198e-46 |
MsG0180003117.01 | MsG0880046575.01 | 0.923548 | 2.298227e-89 | 9.253172e-85 |
MsG0180003117.01 | MsG0880046879.01 | 0.816707 | 4.812378e-52 | 3.435040e-49 |
MsG0180003117.01 | MsG0880046933.01 | 0.854906 | 9.011050e-62 | 2.043771e-58 |
MsG0180003117.01 | MsG0880047120.01 | 0.821614 | 3.676599e-53 | 3.005780e-50 |
MsG0180003117.01 | MsG0880047286.01 | 0.830382 | 3.030055e-55 | 3.187267e-52 |
MsG0180003117.01 | MsG0880047427.01 | 0.853593 | 2.156246e-61 | 4.683546e-58 |
MsG0180003117.01 | MsG0880047428.01 | 0.817143 | 3.842317e-52 | 2.775628e-49 |
MsG0180003117.01 | MsG0880047448.01 | 0.865172 | 7.161299e-65 | 2.308076e-61 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0180003117.01 | MsG0180003115.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003117.01.T01 | MTR_1g054310 | 100.000 | 207 | 0 | 0 | 1 | 207 | 33 | 239 | 1.66e-153 | 425 |
MsG0180003117.01.T01 | MTR_7g107380 | 97.000 | 200 | 4 | 1 | 8 | 207 | 9 | 206 | 9.40e-143 | 396 |
MsG0180003117.01.T01 | MTR_0515s0010 | 89.744 | 78 | 8 | 0 | 44 | 121 | 3 | 80 | 6.35e-48 | 152 |
MsG0180003117.01.T01 | MTR_0306s0010 | 89.744 | 78 | 8 | 0 | 44 | 121 | 3 | 80 | 6.35e-48 | 152 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003117.01.T01 | AT2G37270 | 92.105 | 190 | 14 | 1 | 19 | 207 | 18 | 207 | 3.37e-130 | 365 |
MsG0180003117.01.T01 | AT2G37270 | 92.105 | 190 | 14 | 1 | 19 | 207 | 18 | 207 | 3.37e-130 | 365 |
MsG0180003117.01.T01 | AT3G11940 | 90.000 | 190 | 18 | 1 | 19 | 207 | 18 | 207 | 3.02e-128 | 360 |
MsG0180003117.01.T01 | AT3G11940 | 90.000 | 190 | 18 | 1 | 19 | 207 | 18 | 207 | 3.02e-128 | 360 |
MsG0180003117.01.T01 | ATCG01240 | 34.532 | 139 | 78 | 5 | 71 | 207 | 22 | 149 | 9.79e-11 | 58.5 |
MsG0180003117.01.T01 | ATCG00900 | 34.532 | 139 | 78 | 5 | 71 | 207 | 22 | 149 | 9.79e-11 | 58.5 |
Find 60 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAATTTGAATGATGGTTTA+TGG | 0.240046 | 1:+56861777 | MsG0180003117.01.T01:three_prime_UTR |
CAGATTACTGATTTGTCTCT+TGG | 0.294356 | 1:+56858972 | MsG0180003117.01.T01:intron |
CCATAAAACTTCATTAAATA+AGG | 0.324325 | 1:-56861640 | None:intergenic |
GATACTCGAAGAAGCGATTC+AGG | 0.345165 | 1:+56859051 | MsG0180003117.01.T01:CDS |
CAATGACCTGAATCGGGTTC+TGG | 0.354972 | 1:-56859202 | None:intergenic |
AGCTTGACTTCGATCAGGTT+TGG | 0.359219 | 1:-56858565 | None:intergenic |
CTGGAGCTTCGATGACGTTC+AGG | 0.377509 | 1:+56858597 | MsG0180003117.01.T01:CDS |
TGGAACATATGTTGCATGTT+TGG | 0.388336 | 1:-56859015 | None:intergenic |
AGATTACTGATTTGTCTCTT+GGG | 0.391228 | 1:+56858973 | MsG0180003117.01.T01:intron |
GGATCTGAAACGACTGCAAC+AGG | 0.391313 | 1:-56858544 | None:intergenic |
AACTGACCAGAACCCGATTC+AGG | 0.391358 | 1:+56859196 | MsG0180003117.01.T01:CDS |
TAATTTGAATGATGGTTTAT+GGG | 0.394565 | 1:+56861778 | MsG0180003117.01.T01:three_prime_UTR |
GCATCAACAATGACCTGAAT+CGG | 0.397413 | 1:-56859209 | None:intergenic |
TAATATGATAATTTGAATGA+TGG | 0.400451 | 1:+56861770 | MsG0180003117.01.T01:three_prime_UTR |
AATTGTCTTAATATTTCTAA+AGG | 0.421513 | 1:-56861349 | None:intergenic |
GAAAGAAGCTTATGGCAGTT+AGG | 0.436208 | 1:+56859138 | MsG0180003117.01.T01:CDS |
CGTGAAGATGCAACTCGTAT+TGG | 0.440985 | 1:+56861228 | MsG0180003117.01.T01:CDS |
TTGTTGATGCTGTCGTCAAC+AGG | 0.441734 | 1:+56859222 | MsG0180003117.01.T01:CDS |
AAGACTGAAGCTGCTGAGAA+TGG | 0.444567 | 1:-56858392 | None:intergenic |
GCCATCTATCTTCTAACTAC+TGG | 0.451088 | 1:+56861312 | MsG0180003117.01.T01:CDS |
GAACTTATTAATGCAGCAAA+AGG | 0.453667 | 1:+56861390 | MsG0180003117.01.T01:CDS |
GAACAATGGAAAGAAGCTTA+TGG | 0.464147 | 1:+56859130 | MsG0180003117.01.T01:CDS |
ACCAGTAGTTAGAAGATAGA+TGG | 0.466476 | 1:-56861313 | None:intergenic |
TGAAGAGCTTGACTTCGATC+AGG | 0.472581 | 1:-56858570 | None:intergenic |
GTTGCTAAGGCAAATCGTTA+AGG | 0.480990 | 1:+56861572 | MsG0180003117.01.T01:CDS |
GCAACTCGTATTGGTTCTGC+TGG | 0.481223 | 1:+56861237 | MsG0180003117.01.T01:CDS |
CAGCAAAAGGATCATCCAAC+AGG | 0.484289 | 1:+56861403 | MsG0180003117.01.T01:CDS |
GATTACTGATTTGTCTCTTG+GGG | 0.496398 | 1:+56858974 | MsG0180003117.01.T01:intron |
TAAGGAGCTTGTGGCAGCAT+TGG | 0.502599 | 1:+56861590 | MsG0180003117.01.T01:exon |
AAGTCAAGCTCTTCAACCGC+TGG | 0.503610 | 1:+56858578 | MsG0180003117.01.T01:CDS |
TGCTGAGAATGGAGAAGGTA+TGG | 0.510821 | 1:-56858381 | None:intergenic |
TTGTCTCTTGGGGATTACAT+TGG | 0.513322 | 1:+56858984 | MsG0180003117.01.T01:CDS |
TGAAATTGAAAGAGTTGCTA+AGG | 0.514135 | 1:+56861559 | MsG0180003117.01.T01:CDS |
GGCTTGATTCACACGACGAA+GGG | 0.519901 | 1:-56861292 | None:intergenic |
TGCTGGAGTTGTAAGAAGAC+AGG | 0.532743 | 1:+56861254 | MsG0180003117.01.T01:CDS |
ACATATGTTCCACACACTGC+TGG | 0.537649 | 1:+56859026 | MsG0180003117.01.T01:CDS |
TTAGTGAGCCTCTCAACAAT+GGG | 0.543323 | 1:-56859086 | None:intergenic |
CATCAACAATGACCTGAATC+GGG | 0.560268 | 1:-56859208 | None:intergenic |
CTAACTCTCTCATGATGCAT+GGG | 0.561374 | 1:+56859105 | MsG0180003117.01.T01:CDS |
GTTAGTGAGCCTCTCAACAA+TGG | 0.562680 | 1:-56859087 | None:intergenic |
ACTAACTCTCTCATGATGCA+TGG | 0.563337 | 1:+56859104 | MsG0180003117.01.T01:CDS |
AACCGTGATTGTGGTGGATG+CGG | 0.564962 | 1:-56858419 | None:intergenic |
ATGATGCATGGGAGGAACAA+TGG | 0.566550 | 1:+56859116 | MsG0180003117.01.T01:CDS |
AGTTGTAAGAAGACAGGCTG+TGG | 0.574582 | 1:+56861260 | MsG0180003117.01.T01:CDS |
TAACAAATGAATAATCTCCA+TGG | 0.584701 | 1:-56859174 | None:intergenic |
TGCCGCATCCACCACAATCA+CGG | 0.590840 | 1:+56858417 | MsG0180003117.01.T01:five_prime_UTR |
CTCAGTGTCCCATTGTTGAG+AGG | 0.591866 | 1:+56859078 | MsG0180003117.01.T01:CDS |
GCAAATCGTTAAGGAGCTTG+TGG | 0.593014 | 1:+56861581 | MsG0180003117.01.T01:exon |
TTCTTCAATGACATCAGCCA+TGG | 0.596830 | 1:-56858521 | None:intergenic |
GAAGCTGCTGAGAATGGAGA+AGG | 0.604330 | 1:-56858386 | None:intergenic |
TAGGATCATTAAGCATGCCA+TGG | 0.604935 | 1:+56859157 | MsG0180003117.01.T01:CDS |
GAGTATCTACCAGCAGTGTG+TGG | 0.639793 | 1:-56859035 | None:intergenic |
CAACGATAAAACAAAATCTG+AGG | 0.644709 | 1:-56861615 | None:intergenic |
ACTCTCTCATGATGCATGGG+AGG | 0.648954 | 1:+56859108 | MsG0180003117.01.T01:CDS |
TGAACGAACCGTGATTGTGG+TGG | 0.652757 | 1:-56858425 | None:intergenic |
AAATGAACGAACCGTGATTG+TGG | 0.654236 | 1:-56858428 | None:intergenic |
GAACGTCATCGAAGCTCCAG+CGG | 0.655762 | 1:-56858594 | None:intergenic |
TGGCTTGATTCACACGACGA+AGG | 0.656812 | 1:-56861293 | None:intergenic |
GCTTGATTCACACGACGAAG+GGG | 0.665666 | 1:-56861291 | None:intergenic |
ATACGAGTTGCATCTTCACG+AGG | 0.709806 | 1:-56861225 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTTAAACAAAAAATTAAC+TGG | - | Chr1:56859453-56859472 | None:intergenic | 10.0% |
!!! | TCTTTTTTTAAATTTTTTTC+TGG | + | Chr1:56859700-56859719 | MsG0180003117.01.T01:intron | 10.0% |
!! | AATTATGAAACAGTAATATT+TGG | - | Chr1:56861151-56861170 | None:intergenic | 15.0% |
!! | AATTGAAAATAAAAATGAAC+TGG | - | Chr1:56860557-56860576 | None:intergenic | 15.0% |
!! | ATTGAAAATAAAAATGAACT+GGG | - | Chr1:56860556-56860575 | None:intergenic | 15.0% |
!! | TAAATTCTAATTAGACATAT+TGG | + | Chr1:56859467-56859486 | MsG0180003117.01.T01:intron | 15.0% |
!! | TAATATGATAATTTGAATGA+TGG | + | Chr1:56861770-56861789 | MsG0180003117.01.T01:three_prime_UTR | 15.0% |
!!! | AATTGTCTTAATATTTCTAA+AGG | - | Chr1:56861352-56861371 | None:intergenic | 15.0% |
!!! | CAATGATTTTTTTTATTTTC+TGG | + | Chr1:56859325-56859344 | MsG0180003117.01.T01:intron | 15.0% |
!!! | CTTATTTAATGAAGTTTTAT+GGG | + | Chr1:56861641-56861660 | MsG0180003117.01.T01:three_prime_UTR | 15.0% |
!!! | GATATTTTTTTTTGTGTTTT+TGG | + | Chr1:56858767-56858786 | MsG0180003117.01.T01:intron | 15.0% |
!!! | GTTTTTTTAGTTCAATTAAT+TGG | + | Chr1:56858745-56858764 | MsG0180003117.01.T01:intron | 15.0% |
!!! | TAATATTAACTTTATTTAGC+TGG | - | Chr1:56860344-56860363 | None:intergenic | 15.0% |
!!! | TAATATTTCTATGTTTTTGA+TGG | + | Chr1:56859604-56859623 | MsG0180003117.01.T01:intron | 15.0% |
!!! | TATCATATTATAACTTTTGA+AGG | - | Chr1:56861760-56861779 | None:intergenic | 15.0% |
!! | AAAAAATTAACTGGAATGAT+AGG | - | Chr1:56859444-56859463 | None:intergenic | 20.0% |
!! | AAAAATGTAGTGATTAATGT+TGG | + | Chr1:56858929-56858948 | MsG0180003117.01.T01:intron | 20.0% |
!! | AATCATAATTTCATTCATTG+AGG | - | Chr1:56860871-56860890 | None:intergenic | 20.0% |
!! | AGTAATATTTGTTTCATAAC+AGG | - | Chr1:56861102-56861121 | None:intergenic | 20.0% |
!! | ATAATTTGAATGATGGTTTA+TGG | + | Chr1:56861777-56861796 | MsG0180003117.01.T01:three_prime_UTR | 20.0% |
!! | CATAAATAAACAATTGCAAT+TGG | + | Chr1:56859918-56859937 | MsG0180003117.01.T01:intron | 20.0% |
!! | CCATAAAACTTCATTAAATA+AGG | - | Chr1:56861643-56861662 | None:intergenic | 20.0% |
!! | GTTATCATAAATAAACACTT+TGG | + | Chr1:56859578-56859597 | MsG0180003117.01.T01:intron | 20.0% |
!! | TAATTATTGTGATTGTGATT+AGG | + | Chr1:56859673-56859692 | MsG0180003117.01.T01:intron | 20.0% |
!! | TAATTTGAATGATGGTTTAT+GGG | + | Chr1:56861778-56861797 | MsG0180003117.01.T01:three_prime_UTR | 20.0% |
!! | TAGAAATCAATCAGAAATAT+GGG | + | Chr1:56860200-56860219 | MsG0180003117.01.T01:intron | 20.0% |
!! | TTAGAAATCAATCAGAAATA+TGG | + | Chr1:56860199-56860218 | MsG0180003117.01.T01:intron | 20.0% |
!! | TTCAATTTATAACAAGACTT+TGG | + | Chr1:56860570-56860589 | MsG0180003117.01.T01:intron | 20.0% |
!!! | ATGAATAATTTGTTTCCTAT+TGG | + | Chr1:56860472-56860491 | MsG0180003117.01.T01:intron | 20.0% |
!!! | ATGAATATTTGTTTTCCTAT+TGG | + | Chr1:56860094-56860113 | MsG0180003117.01.T01:intron | 20.0% |
!!! | CCTTATTTAATGAAGTTTTA+TGG | + | Chr1:56861640-56861659 | MsG0180003117.01.T01:three_prime_UTR | 20.0% |
!!! | CTGTTTCATAATTTTGAATT+TGG | + | Chr1:56861158-56861177 | MsG0180003117.01.T01:intron | 20.0% |
!!! | TTTTATTTTCTGGTTTGATA+TGG | + | Chr1:56859335-56859354 | MsG0180003117.01.T01:intron | 20.0% |
! | ATCAAAACTCATGAAATGTA+AGG | - | Chr1:56860690-56860709 | None:intergenic | 25.0% |
! | ATGAATATTTGTTTCCCTAT+TGG | + | Chr1:56859744-56859763 | MsG0180003117.01.T01:intron | 25.0% |
! | ATTCTCGTGTATTTATTGTT+TGG | + | Chr1:56860050-56860069 | MsG0180003117.01.T01:intron | 25.0% |
! | ATTTGATGTTAAACCTACTT+TGG | + | Chr1:56860726-56860745 | MsG0180003117.01.T01:intron | 25.0% |
! | CATTACTAACGAAACATAAA+GGG | - | Chr1:56859509-56859528 | None:intergenic | 25.0% |
! | GAAACATAAAAGTTCATTAC+TGG | - | Chr1:56859828-56859847 | None:intergenic | 25.0% |
! | TAAAACAAATTGCATCATTC+TGG | - | Chr1:56859778-56859797 | None:intergenic | 25.0% |
! | TAACAAATGAATAATCTCCA+TGG | - | Chr1:56859177-56859196 | None:intergenic | 25.0% |
! | TCATTACTAACGAAACATAA+AGG | - | Chr1:56859510-56859529 | None:intergenic | 25.0% |
! | TGATATGTAAATAACAACCT+CGG | - | Chr1:56860986-56861005 | None:intergenic | 25.0% |
! | TGTTTAACTGTTGCAATTTA+TGG | + | Chr1:56861026-56861045 | MsG0180003117.01.T01:intron | 25.0% |
! | TTCTGTGATATCAGATTATT+TGG | + | Chr1:56858822-56858841 | MsG0180003117.01.T01:intron | 25.0% |
!!! | AATTTGGATCTGATTTGTTT+TGG | + | Chr1:56861174-56861193 | MsG0180003117.01.T01:intron | 25.0% |
!!! | ATGAATTTTTGTTTCCCTAT+TGG | + | Chr1:56859369-56859388 | MsG0180003117.01.T01:intron | 25.0% |
!!! | GATGTTTTTATGTACTTGTT+TGG | + | Chr1:56860420-56860439 | MsG0180003117.01.T01:intron | 25.0% |
AAACGAAGAATGAGAAACAA+TGG | - | Chr1:56858491-56858510 | None:intergenic | 30.0% | |
AATACAAAATGCCATCATTC+TGG | - | Chr1:56860128-56860147 | None:intergenic | 30.0% | |
AATACAATTTGCCATCATTC+TGG | - | Chr1:56860506-56860525 | None:intergenic | 30.0% | |
AGAAACAATGGATACAGAAA+AGG | - | Chr1:56858479-56858498 | None:intergenic | 30.0% | |
CAACCACTTACAGTAATATT+TGG | - | Chr1:56860930-56860949 | None:intergenic | 30.0% | |
CAACGATAAAACAAAATCTG+AGG | - | Chr1:56861618-56861637 | None:intergenic | 30.0% | |
CACGAGATGAAAAAAATTCA+TGG | - | Chr1:56861469-56861488 | None:intergenic | 30.0% | |
CTATGCTTAAAAACCAAAGT+AGG | - | Chr1:56860742-56860761 | None:intergenic | 30.0% | |
GAACTTATTAATGCAGCAAA+AGG | + | Chr1:56861390-56861409 | MsG0180003117.01.T01:CDS | 30.0% | |
TAAAAATGAACTGGGAGATA+AGG | - | Chr1:56860548-56860567 | None:intergenic | 30.0% | |
TGAAATTGAAAGAGTTGCTA+AGG | + | Chr1:56861559-56861578 | MsG0180003117.01.T01:CDS | 30.0% | |
TTACTGGAATGATATGAGAA+TGG | - | Chr1:56859812-56859831 | None:intergenic | 30.0% | |
TTAGATACAAACAAATGACC+TGG | - | Chr1:56860179-56860198 | None:intergenic | 30.0% | |
TTCGTTAGTAATGATTGTTG+AGG | + | Chr1:56859516-56859535 | MsG0180003117.01.T01:intron | 30.0% | |
! | AATGATGGTTTATGGGTTTT+TGG | + | Chr1:56861785-56861804 | MsG0180003117.01.T01:three_prime_UTR | 30.0% |
! | ACAGTTAAACACAACACTTT+TGG | - | Chr1:56861017-56861036 | None:intergenic | 30.0% |
! | ATGATTGGTTATTTCCCTAT+TGG | + | Chr1:56860794-56860813 | MsG0180003117.01.T01:intron | 30.0% |
! | ATTTGTAAAAGCATACCTGT+TGG | - | Chr1:56861421-56861440 | None:intergenic | 30.0% |
! | CAGTTAAACACAACACTTTT+GGG | - | Chr1:56861016-56861035 | None:intergenic | 30.0% |
! | TATGAATTGTGGATTGTTGA+TGG | + | Chr1:56859245-56859264 | MsG0180003117.01.T01:intron | 30.0% |
! | TTGCAATTTTCTTATCAAGC+AGG | + | Chr1:56860375-56860394 | MsG0180003117.01.T01:intron | 30.0% |
!! | AGATTACTGATTTGTCTCTT+GGG | + | Chr1:56858973-56858992 | MsG0180003117.01.T01:intron | 30.0% |
!! | ATTTATTGTTTGGCTTGGAA+TGG | + | Chr1:56860060-56860079 | MsG0180003117.01.T01:intron | 30.0% |
!!! | TATTTTCTGGTTTGATATGG+AGG | + | Chr1:56859338-56859357 | MsG0180003117.01.T01:intron | 30.0% |
AACAAATGACCTGGAATGTT+AGG | - | Chr1:56860170-56860189 | None:intergenic | 35.0% | |
ACCAGTAGTTAGAAGATAGA+TGG | - | Chr1:56861316-56861335 | None:intergenic | 35.0% | |
AGAACAGTGACAATTGTAGT+TGG | + | Chr1:56860760-56860779 | MsG0180003117.01.T01:intron | 35.0% | |
ATACATAAATGCCATCATCC+AGG | - | Chr1:56860828-56860847 | None:intergenic | 35.0% | |
ATGACTAGTAATGACTGTTG+AGG | + | Chr1:56859855-56859874 | MsG0180003117.01.T01:intron | 35.0% | |
CGTGTATTTATTGTTTGGCT+TGG | + | Chr1:56860055-56860074 | MsG0180003117.01.T01:intron | 35.0% | |
GAACAATGGAAAGAAGCTTA+TGG | + | Chr1:56859130-56859149 | MsG0180003117.01.T01:CDS | 35.0% | |
GACATGTCAAGAAAAGCAAA+AGG | - | Chr1:56861080-56861099 | None:intergenic | 35.0% | |
GCACCAAATATTACTGTAAG+TGG | + | Chr1:56860924-56860943 | MsG0180003117.01.T01:intron | 35.0% | |
GTGTACGCAAACAAAAATCT+AGG | - | Chr1:56861676-56861695 | None:intergenic | 35.0% | |
TAACTGGAATGATAGGAGAA+TGG | - | Chr1:56859437-56859456 | None:intergenic | 35.0% | |
TATGGTATGTGATAAACCCT+AGG | - | Chr1:56858366-56858385 | None:intergenic | 35.0% | |
TGGAACATATGTTGCATGTT+TGG | - | Chr1:56859018-56859037 | None:intergenic | 35.0% | |
TTGGAGAATGACATGATGAT+TGG | + | Chr1:56860779-56860798 | MsG0180003117.01.T01:intron | 35.0% | |
! | GTGTTTGTGAACTTTTTGTC+TGG | + | Chr1:56859979-56859998 | MsG0180003117.01.T01:intron | 35.0% |
! | TGTGAACTTTTTGTCTGGTT+TGG | + | Chr1:56859984-56860003 | MsG0180003117.01.T01:intron | 35.0% |
!! | CAGATTACTGATTTGTCTCT+TGG | + | Chr1:56858972-56858991 | MsG0180003117.01.T01:intron | 35.0% |
!! | GAAGGTTGATAATCAAACAC+AGG | - | Chr1:56861742-56861761 | None:intergenic | 35.0% |
!! | GATTACTGATTTGTCTCTTG+GGG | + | Chr1:56858974-56858993 | MsG0180003117.01.T01:intron | 35.0% |
!! | TCTATGTTTTTGATGGCTGT+AGG | + | Chr1:56859611-56859630 | MsG0180003117.01.T01:intron | 35.0% |
!! | TTCTGGTTTGATATCGAGAA+TGG | + | Chr1:56859717-56859736 | MsG0180003117.01.T01:intron | 35.0% |
!!! | ACTTTTTGTCTGGTTTGGAA+TGG | + | Chr1:56859989-56860008 | MsG0180003117.01.T01:intron | 35.0% |
AAATGAACGAACCGTGATTG+TGG | - | Chr1:56858431-56858450 | None:intergenic | 40.0% | |
AAATGAACTGGGAGATAAGG+TGG | - | Chr1:56860545-56860564 | None:intergenic | 40.0% | |
ACAATTTGCCATCATTCTGG+CGG | - | Chr1:56860503-56860522 | None:intergenic | 40.0% | |
ACTAACTCTCTCATGATGCA+TGG | + | Chr1:56859104-56859123 | MsG0180003117.01.T01:CDS | 40.0% | |
ACTCTTGCAGTCAAACCAAT+AGG | - | Chr1:56859387-56859406 | None:intergenic | 40.0% | |
ATCCAGGCAATCAATCCAAT+AGG | - | Chr1:56860812-56860831 | None:intergenic | 40.0% | |
ATTCTGGCAGTCAAACCAAT+AGG | - | Chr1:56859762-56859781 | None:intergenic | 40.0% | |
CATCAACAATGACCTGAATC+GGG | - | Chr1:56859211-56859230 | None:intergenic | 40.0% | |
CCAACAACATCTTCTGCAAA+GGG | - | Chr1:56860646-56860665 | None:intergenic | 40.0% | |
CGAAGATTCGAAGAAACTGA+AGG | - | Chr1:56858454-56858473 | None:intergenic | 40.0% | |
CTAACTCTCTCATGATGCAT+GGG | + | Chr1:56859105-56859124 | MsG0180003117.01.T01:CDS | 40.0% | |
CTCTTGCAGTCAAACCAATA+GGG | - | Chr1:56859386-56859405 | None:intergenic | 40.0% | |
GAAAGAAGCTTATGGCAGTT+AGG | + | Chr1:56859138-56859157 | MsG0180003117.01.T01:CDS | 40.0% | |
GCATCAACAATGACCTGAAT+CGG | - | Chr1:56859212-56859231 | None:intergenic | 40.0% | |
GCCATCTATCTTCTAACTAC+TGG | + | Chr1:56861312-56861331 | MsG0180003117.01.T01:CDS | 40.0% | |
GTTGCTAAGGCAAATCGTTA+AGG | + | Chr1:56861572-56861591 | MsG0180003117.01.T01:CDS | 40.0% | |
TAGGATCATTAAGCATGCCA+TGG | + | Chr1:56859157-56859176 | MsG0180003117.01.T01:CDS | 40.0% | |
TATGTACTTGTTTGGCACTC+TGG | + | Chr1:56860428-56860447 | MsG0180003117.01.T01:intron | 40.0% | |
TCCAACAACATCTTCTGCAA+AGG | - | Chr1:56860647-56860666 | None:intergenic | 40.0% | |
TCCAGGCAATCAATCCAATA+GGG | - | Chr1:56860811-56860830 | None:intergenic | 40.0% | |
TCGTCAACAGGTATGAATTG+TGG | + | Chr1:56859234-56859253 | MsG0180003117.01.T01:intron | 40.0% | |
TTAGTGAGCCTCTCAACAAT+GGG | - | Chr1:56859089-56859108 | None:intergenic | 40.0% | |
TTCTGGCAGTCAAACCAATA+GGG | - | Chr1:56859761-56859780 | None:intergenic | 40.0% | |
TTCTTCAATGACATCAGCCA+TGG | - | Chr1:56858524-56858543 | None:intergenic | 40.0% | |
TTGTCTCTTGGGGATTACAT+TGG | + | Chr1:56858984-56859003 | MsG0180003117.01.T01:CDS | 40.0% | |
!! | CGCTTGTGTCATTTGTATAG+TGG | + | Chr1:56861201-56861220 | MsG0180003117.01.T01:intron | 40.0% |
!! | TATTGTTTGGCTTGGAATGG+AGG | + | Chr1:56860063-56860082 | MsG0180003117.01.T01:intron | 40.0% |
!! | TTCTGGTTTGATATGGAGGA+TGG | + | Chr1:56859342-56859361 | MsG0180003117.01.T01:intron | 40.0% |
!!! | TTTTGTCTGGTTTGGAATGG+TGG | + | Chr1:56859992-56860011 | MsG0180003117.01.T01:intron | 40.0% |
AAGACTGAAGCTGCTGAGAA+TGG | - | Chr1:56858395-56858414 | None:intergenic | 45.0% | |
ACATATGTTCCACACACTGC+TGG | + | Chr1:56859026-56859045 | MsG0180003117.01.T01:CDS | 45.0% | |
AGCTTGACTTCGATCAGGTT+TGG | - | Chr1:56858568-56858587 | None:intergenic | 45.0% | |
AGTTGTAAGAAGACAGGCTG+TGG | + | Chr1:56861260-56861279 | MsG0180003117.01.T01:CDS | 45.0% | |
ATACGAGTTGCATCTTCACG+AGG | - | Chr1:56861228-56861247 | None:intergenic | 45.0% | |
ATGATGCATGGGAGGAACAA+TGG | + | Chr1:56859116-56859135 | MsG0180003117.01.T01:CDS | 45.0% | |
ATGGAAGACTGCATGTGTAC+AGG | - | Chr1:56861450-56861469 | None:intergenic | 45.0% | |
ATTCTGGCGGTCAAACCAAT+AGG | - | Chr1:56860490-56860509 | None:intergenic | 45.0% | |
CAGCAAAAGGATCATCCAAC+AGG | + | Chr1:56861403-56861422 | MsG0180003117.01.T01:CDS | 45.0% | |
CCCTTTGCAGAAGATGTTGT+TGG | + | Chr1:56860643-56860662 | MsG0180003117.01.T01:intron | 45.0% | |
CGGAAAATACACAGCTAGCA+TGG | - | Chr1:56860966-56860985 | None:intergenic | 45.0% | |
CGTGAAGATGCAACTCGTAT+TGG | + | Chr1:56861228-56861247 | MsG0180003117.01.T01:CDS | 45.0% | |
GACCATTCTCCTAACATTCC+AGG | + | Chr1:56860158-56860177 | MsG0180003117.01.T01:intron | 45.0% | |
GACCTGGAATGTTAGGAGAA+TGG | - | Chr1:56860163-56860182 | None:intergenic | 45.0% | |
GATACTCGAAGAAGCGATTC+AGG | + | Chr1:56859051-56859070 | MsG0180003117.01.T01:CDS | 45.0% | |
GCAAATCGTTAAGGAGCTTG+TGG | + | Chr1:56861581-56861600 | MsG0180003117.01.T01:exon | 45.0% | |
GTTAGTGAGCCTCTCAACAA+TGG | - | Chr1:56859090-56859109 | None:intergenic | 45.0% | |
TCCCTATTGGATTGATTGCC+TGG | + | Chr1:56860807-56860826 | MsG0180003117.01.T01:intron | 45.0% | |
TGAAGAGCTTGACTTCGATC+AGG | - | Chr1:56858573-56858592 | None:intergenic | 45.0% | |
TGCTGAGAATGGAGAAGGTA+TGG | - | Chr1:56858384-56858403 | None:intergenic | 45.0% | |
TGCTGGAGTTGTAAGAAGAC+AGG | + | Chr1:56861254-56861273 | MsG0180003117.01.T01:CDS | 45.0% | |
TGGATTGATTGCCTGGATGA+TGG | + | Chr1:56860814-56860833 | MsG0180003117.01.T01:intron | 45.0% | |
TGGTTTGACTGCCAGAATGA+TGG | + | Chr1:56859764-56859783 | MsG0180003117.01.T01:intron | 45.0% | |
TTCGTTTCTCTATGCAGCCA+TGG | + | Chr1:56858504-56858523 | MsG0180003117.01.T01:intron | 45.0% | |
TTGTTGATGCTGTCGTCAAC+AGG | + | Chr1:56859222-56859241 | MsG0180003117.01.T01:CDS | 45.0% | |
! | TGCTAGCTGTGTATTTTCCG+AGG | + | Chr1:56860966-56860985 | MsG0180003117.01.T01:intron | 45.0% |
!! | CTCTGGCTTGATTTGTAGGA+TGG | + | Chr1:56860445-56860464 | MsG0180003117.01.T01:intron | 45.0% |
!!! | GGTTTATGGGTTTTTGGCCT+AGG | + | Chr1:56861791-56861810 | MsG0180003117.01.T01:three_prime_UTR | 45.0% |
!!! | TTTTTTTTACATAAATTAAT+TGG | + | Chr1:56858882-56858901 | MsG0180003117.01.T01:intron | 5.0% |
AACTGACCAGAACCCGATTC+AGG | + | Chr1:56859196-56859215 | MsG0180003117.01.T01:CDS | 50.0% | |
AAGTCAAGCTCTTCAACCGC+TGG | + | Chr1:56858578-56858597 | MsG0180003117.01.T01:CDS | 50.0% | |
ACTCTCTCATGATGCATGGG+AGG | + | Chr1:56859108-56859127 | MsG0180003117.01.T01:CDS | 50.0% | |
CAATGACCTGAATCGGGTTC+TGG | - | Chr1:56859205-56859224 | None:intergenic | 50.0% | |
CTCAGTGTCCCATTGTTGAG+AGG | + | Chr1:56859078-56859097 | MsG0180003117.01.T01:CDS | 50.0% | |
GAACTGGGAGATAAGGTGGA+TGG | - | Chr1:56860541-56860560 | None:intergenic | 50.0% | |
GAAGCTGCTGAGAATGGAGA+AGG | - | Chr1:56858389-56858408 | None:intergenic | 50.0% | |
GAGTATCTACCAGCAGTGTG+TGG | - | Chr1:56859038-56859057 | None:intergenic | 50.0% | |
GCTTGATTCACACGACGAAG+GGG | - | Chr1:56861294-56861313 | None:intergenic | 50.0% | |
GGCTTGATTCACACGACGAA+GGG | - | Chr1:56861295-56861314 | None:intergenic | 50.0% | |
TAAGGAGCTTGTGGCAGCAT+TGG | + | Chr1:56861590-56861609 | MsG0180003117.01.T01:exon | 50.0% | |
TGAACGAACCGTGATTGTGG+TGG | - | Chr1:56858428-56858447 | None:intergenic | 50.0% | |
TGGCTTGATTCACACGACGA+AGG | - | Chr1:56861296-56861315 | None:intergenic | 50.0% | |
TGGTTTGACCGCCAGAATGA+TGG | + | Chr1:56860492-56860511 | MsG0180003117.01.T01:intron | 50.0% | |
! | GGATCTGAAACGACTGCAAC+AGG | - | Chr1:56858547-56858566 | None:intergenic | 50.0% |
!! | AACCGTGATTGTGGTGGATG+CGG | - | Chr1:56858422-56858441 | None:intergenic | 50.0% |
!! | GCAACTCGTATTGGTTCTGC+TGG | + | Chr1:56861237-56861256 | MsG0180003117.01.T01:CDS | 50.0% |
!! | GGCACTCTGGCTTGATTTGT+AGG | + | Chr1:56860441-56860460 | MsG0180003117.01.T01:intron | 50.0% |
!! | GTTTGGCTTGGAATGGAGGA+TGG | + | Chr1:56860067-56860086 | MsG0180003117.01.T01:intron | 50.0% |
CTGGAGCTTCGATGACGTTC+AGG | + | Chr1:56858597-56858616 | MsG0180003117.01.T01:CDS | 55.0% | |
GAACGTCATCGAAGCTCCAG+CGG | - | Chr1:56858597-56858616 | None:intergenic | 55.0% | |
TGCCGCATCCACCACAATCA+CGG | + | Chr1:56858417-56858436 | MsG0180003117.01.T01:five_prime_UTR | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 56858366 | 56861810 | 56858366 | ID=MsG0180003117.01;Name=MsG0180003117.01 |
Chr1 | mRNA | 56858366 | 56861810 | 56858366 | ID=MsG0180003117.01.T01;Parent=MsG0180003117.01;Name=MsG0180003117.01.T01;_AED=0.44;_eAED=0.44;_QI=75|1|1|1|0.6|0.33|6|197|207 |
Chr1 | exon | 56858366 | 56858438 | 56858366 | ID=MsG0180003117.01.T01:exon:15630;Parent=MsG0180003117.01.T01 |
Chr1 | exon | 56858521 | 56858618 | 56858521 | ID=MsG0180003117.01.T01:exon:15631;Parent=MsG0180003117.01.T01 |
Chr1 | exon | 56858975 | 56859243 | 56858975 | ID=MsG0180003117.01.T01:exon:15632;Parent=MsG0180003117.01.T01 |
Chr1 | exon | 56861221 | 56861424 | 56861221 | ID=MsG0180003117.01.T01:exon:15633;Parent=MsG0180003117.01.T01 |
Chr1 | exon | 56861538 | 56861741 | 56861538 | ID=MsG0180003117.01.T01:exon:15634;Parent=MsG0180003117.01.T01 |
Chr1 | exon | 56861763 | 56861810 | 56861763 | ID=MsG0180003117.01.T01:exon:15635;Parent=MsG0180003117.01.T01 |
Chr1 | five_prime_UTR | 56858366 | 56858438 | 56858366 | ID=MsG0180003117.01.T01:five_prime_utr;Parent=MsG0180003117.01.T01 |
Chr1 | five_prime_UTR | 56858521 | 56858522 | 56858521 | ID=MsG0180003117.01.T01:five_prime_utr;Parent=MsG0180003117.01.T01 |
Chr1 | CDS | 56858523 | 56858618 | 56858523 | ID=MsG0180003117.01.T01:cds;Parent=MsG0180003117.01.T01 |
Chr1 | CDS | 56858975 | 56859243 | 56858975 | ID=MsG0180003117.01.T01:cds;Parent=MsG0180003117.01.T01 |
Chr1 | CDS | 56861221 | 56861424 | 56861221 | ID=MsG0180003117.01.T01:cds;Parent=MsG0180003117.01.T01 |
Chr1 | CDS | 56861538 | 56861592 | 56861538 | ID=MsG0180003117.01.T01:cds;Parent=MsG0180003117.01.T01 |
Chr1 | three_prime_UTR | 56861593 | 56861741 | 56861593 | ID=MsG0180003117.01.T01:three_prime_utr;Parent=MsG0180003117.01.T01 |
Chr1 | three_prime_UTR | 56861763 | 56861810 | 56861763 | ID=MsG0180003117.01.T01:three_prime_utr;Parent=MsG0180003117.01.T01 |
Gene Sequence |
Protein sequence |