AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031353.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031353.01.T01 MTR_6g018770 94.576 885 48 0 1 885 1 885 0.0 1619
MsG0680031353.01.T01 MTR_7g082220 48.311 977 376 33 1 884 1 941 0.0 656
MsG0680031353.01.T01 MTR_4g008820 47.609 481 188 22 13 467 210 652 1.16e-82 280
MsG0680031353.01.T01 MTR_1g083850 29.775 178 110 6 708 877 577 747 6.19e-14 76.6
MsG0680031353.01.T01 MTR_7g112030 36.538 104 64 2 775 878 807 908 3.39e-13 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031353.01.T01 AT1G67040 30.332 933 487 40 1 877 1 826 9.39e-79 273
MsG0680031353.01.T01 AT1G67040 30.505 931 486 41 1 877 1 824 2.21e-78 272

Find 161 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAATATTGGTCGGGATTT+TGG 0.050967 6:-18806545 None:intergenic
ATCAGAAAATGAAGATTTAT+TGG 0.150712 6:-18803550 None:intergenic
CCAAAATCCCGACCAATATT+AGG 0.151126 6:+18806545 MsG0680031353.01.T01:three_prime_UTR
TTCTGTCACAATGCCGTTAT+TGG 0.209571 6:-18803931 None:intergenic
GATTCTTTGAAGAAGTTTAA+AGG 0.209979 6:+18803005 MsG0680031353.01.T01:CDS
AGAGGTCTCTTGGGATCTTT+TGG 0.225748 6:+18806482 MsG0680031353.01.T01:three_prime_UTR
ATGCATGAAAGCTGAGATTT+TGG 0.225793 6:+18806110 MsG0680031353.01.T01:CDS
ATCAATGCAGGTGATCTTTC+AGG 0.235614 6:-18804887 None:intergenic
TGAAGATGTGCTTCAAATTT+TGG 0.251852 6:+18806278 MsG0680031353.01.T01:CDS
TTCATTGCTGAATTGGTTCT+TGG 0.260531 6:+18805862 MsG0680031353.01.T01:CDS
AATTGCTGCCACAATTATTA+TGG 0.262329 6:+18806048 MsG0680031353.01.T01:CDS
CTTATTGTCGTTAATCTTAT+CGG 0.264377 6:-18804669 None:intergenic
TTTATTAGGTAGTGAAGTTT+TGG 0.269901 6:+18802286 None:intergenic
TAGTTCACCTCTTAAGAAAA+AGG 0.271508 6:+18804718 MsG0680031353.01.T01:CDS
CTTTGATTGTAGATTGCTAA+TGG 0.275356 6:+18803387 MsG0680031353.01.T01:intron
ACAAATCATGTTGGATTATT+CGG 0.275766 6:+18805445 MsG0680031353.01.T01:CDS
GATCTTAGAACCTGGTTTGC+AGG 0.281934 6:+18803857 MsG0680031353.01.T01:CDS
ATCAATTCGGTAAACAAGTT+TGG 0.298864 6:-18805764 None:intergenic
TGATGATGGTGAGGAGTCTT+TGG 0.307931 6:+18803575 MsG0680031353.01.T01:CDS
CCTTCATGTTTCAACCGTTC+AGG 0.309083 6:-18805682 None:intergenic
AATCAATCATGTTATAATTC+TGG 0.310463 6:+18803984 MsG0680031353.01.T01:CDS
ACCAAATGGAGTTGGGAATT+AGG 0.310684 6:-18803041 None:intergenic
TGAGTCACTCATTGGGAAAA+TGG 0.316669 6:+18806211 MsG0680031353.01.T01:CDS
GCCATTGAACATTTGATCAT+TGG 0.322320 6:-18804957 None:intergenic
TTTGATCATTGGAACATGTT+AGG 0.323969 6:-18804946 None:intergenic
TGCAAGCACATATATTCTTC+TGG 0.326935 6:-18804249 None:intergenic
CATCTGACATTAGAATTGTT+TGG 0.332968 6:-18804623 None:intergenic
CAAAATCCCGACCAATATTA+GGG 0.333462 6:+18806546 MsG0680031353.01.T01:three_prime_UTR
AGTTATCTTCATTGCTGAAT+TGG 0.339654 6:+18805855 MsG0680031353.01.T01:CDS
AACAGAAGCTGAAAGAATTA+AGG 0.344196 6:+18804828 MsG0680031353.01.T01:CDS
TTTCAATCGAAGCCAACTTA+AGG 0.361553 6:+18805987 MsG0680031353.01.T01:CDS
TGAGGGGTCGATGATGTCTT+TGG 0.362655 6:-18804778 None:intergenic
GGAAGATGCAAGAAAACATT+TGG 0.365373 6:-18803892 None:intergenic
GCCTAATTCCCAACTCCATT+TGG 0.368909 6:+18803040 MsG0680031353.01.T01:CDS
TTCAATCGAAGCCAACTTAA+GGG 0.371336 6:+18805988 MsG0680031353.01.T01:CDS
TCAGAACCTTGTCTGCTTGA+AGG 0.375714 6:-18804560 None:intergenic
TTTGCAATATCTTATCAATT+CGG 0.382071 6:-18805777 None:intergenic
TCATTTAACACAGGAAAGAT+AGG 0.389980 6:+18805727 MsG0680031353.01.T01:CDS
GAAGAGTCCGAGAATTTCTT+CGG 0.392103 6:+18803788 MsG0680031353.01.T01:CDS
CGCTGATGCTGAAGAGAAAT+CGG 0.398447 6:-18804099 None:intergenic
TTTGATTGTAGATTGCTAAT+GGG 0.399660 6:+18803388 MsG0680031353.01.T01:intron
CTCTAAGTTGTTCATGCAAC+AGG 0.400509 6:+18806379 MsG0680031353.01.T01:three_prime_UTR
AAGCTAGGTGGTGGTTGTAT+TGG 0.402353 6:+18802437 MsG0680031353.01.T01:CDS
GATTTATCTCTCTTTGAAGA+TGG 0.402536 6:-18803528 None:intergenic
ATCTCAGCTTTCATGCATAA+AGG 0.404055 6:-18806105 None:intergenic
AACTAAACCAAGTAATTGAT+TGG 0.409723 6:+18806184 MsG0680031353.01.T01:CDS
TTGGGAGATGAGTCACTCAT+TGG 0.418329 6:+18806203 MsG0680031353.01.T01:CDS
CTCTTTCCCGAAGAAATTCT+CGG 0.418867 6:-18803795 None:intergenic
TTGCATCTATCTGCCTTAGT+AGG 0.422024 6:-18804518 None:intergenic
CGAATAGAAATCCCTTAAGT+TGG 0.429969 6:-18805999 None:intergenic
TCATCTCCCAATCAATTACT+TGG 0.431669 6:-18806191 None:intergenic
CACATATATTCTTCTGGAAG+TGG 0.436122 6:-18804243 None:intergenic
CTGTTGCATGAACAACTTAG+AGG 0.436592 6:-18806378 None:intergenic
TTGGATAAGGTCTCCTACTA+AGG 0.440705 6:+18804505 MsG0680031353.01.T01:CDS
GCCTCAGAAGCTTCGGAAAA+CGG 0.442167 6:+18803632 MsG0680031353.01.T01:CDS
TTTGAGGCGGGTGTTGATAT+TGG 0.445664 6:+18806255 MsG0680031353.01.T01:CDS
AAGTCTTGTAGCTAGGTTGA+TGG 0.445700 6:+18803491 MsG0680031353.01.T01:CDS
CAAACCGCATGGAGGCTTAG+AGG 0.445930 6:+18804289 MsG0680031353.01.T01:CDS
TTACTCTAATAGAGGTCTCT+TGG 0.448695 6:+18806472 MsG0680031353.01.T01:three_prime_UTR
TAAGAACAATTTATAGAGCC+AGG 0.449521 6:-18805652 None:intergenic
AAGAGTCCGAGAATTTCTTC+GGG 0.450925 6:+18803789 MsG0680031353.01.T01:CDS
AGAAGAGCAGTGACTAGGTT+TGG 0.456776 6:+18803666 MsG0680031353.01.T01:CDS
AAAGCCTAAGTGGTCGAACT+TGG 0.464732 6:+18804486 MsG0680031353.01.T01:CDS
CTGTTTGTAGCCTGCAAACC+AGG 0.470209 6:-18803867 None:intergenic
TGTTCTTACCAAATGGAGTT+GGG 0.472016 6:-18803048 None:intergenic
GATGCAAATTTGATCTAGAA+AGG 0.476115 6:+18804534 MsG0680031353.01.T01:CDS
TTCTGGCATAGACAAGTCAT+TGG 0.478796 6:+18804001 MsG0680031353.01.T01:CDS
GATTAAGAAGTGGGAATGTA+TGG 0.479978 6:+18806152 MsG0680031353.01.T01:CDS
CAAGAGTGAGATTAAGAAGT+GGG 0.481067 6:+18806143 MsG0680031353.01.T01:CDS
TACTCTAATAGAGGTCTCTT+GGG 0.482656 6:+18806473 MsG0680031353.01.T01:three_prime_UTR
GATGCTTCCAAGACTGATCC+AGG 0.482842 6:-18805496 None:intergenic
TGAGCCTTCATCGAGACTAC+TGG 0.485738 6:-18805527 None:intergenic
AGAGGTGAACTAAAGGTAGA+TGG 0.486475 6:-18804707 None:intergenic
AGTCAAGGCCTCAGAAGCTT+CGG 0.491390 6:+18803625 MsG0680031353.01.T01:CDS
TTTCTTAAGAGGTGAACTAA+AGG 0.491409 6:-18804714 None:intergenic
TCCAATGATCAAATGTTCAA+TGG 0.495249 6:+18804956 MsG0680031353.01.T01:CDS
TCTCAGTCCTGGATCAGTCT+TGG 0.495904 6:+18805489 MsG0680031353.01.T01:CDS
CATAAAACTCGAACACAAGA+AGG 0.496476 6:+18804341 MsG0680031353.01.T01:CDS
ACTAAACCAAGTAATTGATT+GGG 0.497729 6:+18806185 MsG0680031353.01.T01:CDS
TAACGGCATTGTGACAGAAA+TGG 0.498435 6:+18803935 MsG0680031353.01.T01:CDS
TCAAAGTGTCCTACCAATAA+CGG 0.502704 6:+18803918 MsG0680031353.01.T01:CDS
GAAATTCTCGGACTCTTCAA+AGG 0.504286 6:-18803783 None:intergenic
ATGTTCTTACCAAATGGAGT+TGG 0.504634 6:-18803049 None:intergenic
GAAATTTCTTTGCATAGCAT+CGG 0.506095 6:-18805968 None:intergenic
ATTGGTAGGACACTTTGAAA+TGG 0.506348 6:-18803913 None:intergenic
TAAGTGGTCGAACTTGGATA+AGG 0.507158 6:+18804492 MsG0680031353.01.T01:CDS
ACCTAAAACTTCTTCTCTGA+GGG 0.509028 6:-18804795 None:intergenic
CTTGAATTGCGTTACAGTTG+CGG 0.509175 6:-18806625 None:intergenic
GCGAAAACATCTGAAACAAC+AGG 0.509948 6:-18804077 None:intergenic
CATGAGTTATGATCTTCTCC+TGG 0.522859 6:-18804178 None:intergenic
TGGGAGATGAGTCACTCATT+GGG 0.526532 6:+18806204 MsG0680031353.01.T01:CDS
TGATTGTGTTACTCTAATAG+AGG 0.528441 6:+18806464 MsG0680031353.01.T01:three_prime_UTR
AAGAAGAATAATCAAAAGCT+AGG 0.529032 6:+18802422 MsG0680031353.01.T01:CDS
TCTTCCAGTAGTCTCGATGA+AGG 0.531049 6:+18805523 MsG0680031353.01.T01:CDS
TCTGGCATAGACAAGTCATT+GGG 0.533419 6:+18804002 MsG0680031353.01.T01:CDS
TCTAATGTCAGATGTAAAAG+AGG 0.536571 6:+18804632 MsG0680031353.01.T01:CDS
AGTGATGATGCTAGTGTGAA+TGG 0.540323 6:+18802374 MsG0680031353.01.T01:CDS
AGTAGTCTCGATGAAGGCTC+AGG 0.544009 6:+18805529 MsG0680031353.01.T01:CDS
TCAAGAGTGAGATTAAGAAG+TGG 0.554941 6:+18806142 MsG0680031353.01.T01:CDS
AAGAAGTGGGAATGTATGGT+TGG 0.555304 6:+18806156 MsG0680031353.01.T01:CDS
CATGTTTCAACCGTTCAGGT+TGG 0.559219 6:-18805678 None:intergenic
TGTTTAAGTCATGGTGTGCA+TGG 0.560555 6:+18806073 MsG0680031353.01.T01:CDS
ACGAGAGAAGAGCAGTGACT+AGG 0.561080 6:+18803661 MsG0680031353.01.T01:CDS
CATGGAGGCTTAGAGGATGA+TGG 0.562488 6:+18804296 MsG0680031353.01.T01:CDS
AAGACTGACAGAGAGCAAGC+TGG 0.569053 6:+18805819 MsG0680031353.01.T01:CDS
TGTAGTTCTTCTCAGAAGCC+AGG 0.569110 6:+18804160 MsG0680031353.01.T01:CDS
AAACAAGTTTATTAGCGTGA+TGG 0.570139 6:-18803758 None:intergenic
AGTCTTGTAGCTAGGTTGAT+GGG 0.572119 6:+18803492 MsG0680031353.01.T01:CDS
ATCAACCTAGCTACAAGACT+TGG 0.573014 6:-18803489 None:intergenic
TATGATCATGATTTATGCTG+CGG 0.574182 6:+18806584 MsG0680031353.01.T01:three_prime_UTR
TGACAGAAATGGCTGGAACT+CGG 0.575576 6:+18803946 MsG0680031353.01.T01:CDS
AATAATCAAAAGCTAGGTGG+TGG 0.577202 6:+18802428 MsG0680031353.01.T01:CDS
AATGGTAATCATCTCAGTCC+TGG 0.577258 6:+18805478 MsG0680031353.01.T01:CDS
AATTCTTGAAGAATCAATGC+AGG 0.584695 6:-18804899 None:intergenic
GGCATTGTGACAGAAATGGC+TGG 0.587128 6:+18803939 MsG0680031353.01.T01:CDS
TTATCCAAGTTCGACCACTT+AGG 0.587530 6:-18804490 None:intergenic
AAGCACCAAGTCTTGTAGCT+AGG 0.588985 6:+18803484 MsG0680031353.01.T01:CDS
AGAAGAGACTAACCAGGAGG+AGG 0.589050 6:-18802530 None:intergenic
TTATTCGGAACCTCTTGCAA+TGG 0.593405 6:+18805460 MsG0680031353.01.T01:CDS
GAGATGATTACCATTGCAAG+AGG 0.593654 6:-18805470 None:intergenic
TAAACACACCATAATAATTG+TGG 0.593837 6:-18806056 None:intergenic
GTGGGAATGTATGGTTGGCA+TGG 0.594355 6:+18806161 MsG0680031353.01.T01:CDS
ATTATGGTGTGTTTAAGTCA+TGG 0.596620 6:+18806064 MsG0680031353.01.T01:CDS
CACCTAAAACTTCTTCTCTG+AGG 0.598854 6:-18804796 None:intergenic
TGTTTGAATCAAAGCCTAAG+TGG 0.598960 6:+18804476 MsG0680031353.01.T01:CDS
CGAATGCAAGGCATGAGTCA+AGG 0.602268 6:+18803610 MsG0680031353.01.T01:CDS
CCTGAACGGTTGAAACATGA+AGG 0.602964 6:+18805682 MsG0680031353.01.T01:CDS
GCTACTAAGATCTTAGAACC+TGG 0.603700 6:+18803849 MsG0680031353.01.T01:CDS
ACAACTAAAAGCACTGTGAG+TGG 0.605373 6:+18804437 MsG0680031353.01.T01:CDS
GTCACTAGGAACAATGAGGA+AGG 0.607114 6:+18805889 MsG0680031353.01.T01:CDS
TCCTGTGTTAAATGATGCTG+CGG 0.608805 6:-18805719 None:intergenic
AGATCAAAGCTACGAATGCA+AGG 0.611185 6:+18803598 MsG0680031353.01.T01:CDS
TGGTTCTTGGAAATGTCACT+AGG 0.612409 6:+18805875 MsG0680031353.01.T01:CDS
ATTGCTAATGGGAACAGTGG+AGG 0.612632 6:+18803399 MsG0680031353.01.T01:CDS
AGGAAACCTTCAAGCAGACA+AGG 0.614022 6:+18804554 MsG0680031353.01.T01:CDS
ATGCAAGAAATGAGAAGCTG+TGG 0.616016 6:-18805919 None:intergenic
GATTCATCGCGCAAACCGCA+TGG 0.616348 6:+18804278 MsG0680031353.01.T01:CDS
AAGAACAATTTATAGAGCCA+GGG 0.617947 6:-18805651 None:intergenic
GATTGATTCTGTATATCTTG+TGG 0.620065 6:-18803969 None:intergenic
GTTCTTACGACCAACCTGAA+CGG 0.622153 6:+18805668 MsG0680031353.01.T01:CDS
GTCACAATGCCGTTATTGGT+AGG 0.622935 6:-18803927 None:intergenic
ATAAAACTCGAACACAAGAA+GGG 0.626617 6:+18804342 MsG0680031353.01.T01:CDS
TTCTGATAGTGATGATGGTG+AGG 0.629680 6:+18803566 MsG0680031353.01.T01:CDS
TCCGCAGCATCATTTAACAC+AGG 0.629948 6:+18805718 MsG0680031353.01.T01:CDS
TAGATTGCTAATGGGAACAG+TGG 0.630457 6:+18803396 MsG0680031353.01.T01:intron
GTCATGGTGTGCATGGACAA+AGG 0.631811 6:+18806080 MsG0680031353.01.T01:CDS
AGAGTACATCTCGAAGCTCA+AGG 0.642881 6:+18803814 MsG0680031353.01.T01:CDS
CAGTGTGAGACAAATCATGT+TGG 0.649961 6:+18805436 MsG0680031353.01.T01:intron
GTTCAATGGCAAATGTCCGA+AGG 0.650827 6:+18804970 MsG0680031353.01.T01:CDS
AATGTCAGATGTAAAAGAGG+AGG 0.652424 6:+18804635 MsG0680031353.01.T01:CDS
AAGAATAATCAAAAGCTAGG+TGG 0.660457 6:+18802425 MsG0680031353.01.T01:CDS
CTGGCATAGACAAGTCATTG+GGG 0.665747 6:+18804003 MsG0680031353.01.T01:CDS
ACTTCTCGATGAACTCAACA+TGG 0.676926 6:+18805942 MsG0680031353.01.T01:CDS
AAATGTCACTAGGAACAATG+AGG 0.695218 6:+18805885 MsG0680031353.01.T01:CDS
TCATCGCGCAAACCGCATGG+AGG 0.697799 6:+18804281 MsG0680031353.01.T01:CDS
TCAGAAGCTTCGGAAAACGG+AGG 0.698643 6:+18803635 MsG0680031353.01.T01:CDS
AGACAAGGTTCTGATGCACA+AGG 0.700943 6:+18804569 MsG0680031353.01.T01:CDS
TAACGACAATAAGATGAACA+AGG 0.709510 6:+18804679 MsG0680031353.01.T01:CDS
TGGCATAGACAAGTCATTGG+GGG 0.718479 6:+18804004 MsG0680031353.01.T01:CDS
CCTAAAACTTCTTCTCTGAG+GGG 0.722704 6:-18804794 None:intergenic
TCATCCTCTAAGCCTCCATG+CGG 0.772619 6:-18804293 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAGAAAACAAAAGAAA+TGG - Chr6:18802829-18802848 None:intergenic 15.0%
!! TTTATTAAAAACCCTAATAT+TGG - Chr6:18806560-18806579 None:intergenic 15.0%
!!! AATATTAGGGTTTTTAATAA+AGG + Chr6:18806559-18806578 MsG0680031353.01.T01:three_prime_UTR 15.0%
!!! GTTTTTTGATATAGTTATTT+TGG + Chr6:18802315-18802334 MsG0680031353.01.T01:five_prime_UTR 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG + Chr6:18805221-18805240 MsG0680031353.01.T01:intron 15.0%
!!! TTGACTTATTTATCATTTTT+TGG + Chr6:18805095-18805114 MsG0680031353.01.T01:intron 15.0%
!! AATCAATCATGTTATAATTC+TGG + Chr6:18803984-18804003 MsG0680031353.01.T01:CDS 20.0%
!! ATCAGAAAATGAAGATTTAT+TGG - Chr6:18803553-18803572 None:intergenic 20.0%
!! GAATATAATCAATGTATTGA+TGG - Chr6:18805193-18805212 None:intergenic 20.0%
!! TTTGCAATATCTTATCAATT+CGG - Chr6:18805780-18805799 None:intergenic 20.0%
!!! CATTGATTATAATGAAGATA+AGG - Chr6:18805067-18805086 None:intergenic 20.0%
!!! TATTTTGGTGTTTTTTCATT+AGG + Chr6:18802330-18802349 MsG0680031353.01.T01:five_prime_UTR 20.0%
! AAATGTGAAAATTTCACATG+AGG + Chr6:18802906-18802925 MsG0680031353.01.T01:intron 25.0%
! AACTAAACCAAGTAATTGAT+TGG + Chr6:18806184-18806203 MsG0680031353.01.T01:CDS 25.0%
! AAGAAGAATAATCAAAAGCT+AGG + Chr6:18802422-18802441 MsG0680031353.01.T01:CDS 25.0%
! AATGTGAAAATTTCACATGA+GGG + Chr6:18802907-18802926 MsG0680031353.01.T01:intron 25.0%
! ACAAAATCTATGTATTCACA+CGG + Chr6:18803149-18803168 MsG0680031353.01.T01:intron 25.0%
! ACAAATCATGTTGGATTATT+CGG + Chr6:18805445-18805464 MsG0680031353.01.T01:CDS 25.0%
! ACTAAACCAAGTAATTGATT+GGG + Chr6:18806185-18806204 MsG0680031353.01.T01:CDS 25.0%
! ATATGTTGGATATTCGTTAT+GGG + Chr6:18805129-18805148 MsG0680031353.01.T01:intron 25.0%
! CAATAGTTATCAGTAAATGT+AGG + Chr6:18805029-18805048 MsG0680031353.01.T01:intron 25.0%
! CTACATTTACTGATAACTAT+TGG - Chr6:18805031-18805050 None:intergenic 25.0%
! CTTATTGTCGTTAATCTTAT+CGG - Chr6:18804672-18804691 None:intergenic 25.0%
! TAAACACACCATAATAATTG+TGG - Chr6:18806059-18806078 None:intergenic 25.0%
! TATATATCACTTATGAAGCT+CGG + Chr6:18802599-18802618 MsG0680031353.01.T01:intron 25.0%
! TATCATATGTTCTTACCAAA+TGG - Chr6:18803058-18803077 None:intergenic 25.0%
! TTAAAAACCCTAATATTGGT+CGG - Chr6:18806556-18806575 None:intergenic 25.0%
! TTTCAAATGCGAAAAAAAGT+GGG + Chr6:18803424-18803443 MsG0680031353.01.T01:CDS 25.0%
! TTTGATTGTAGATTGCTAAT+GGG + Chr6:18803388-18803407 MsG0680031353.01.T01:intron 25.0%
!! ATATCCAACATATGATTTGT+AGG - Chr6:18805122-18805141 None:intergenic 25.0%
!! GATTCTTTGAAGAAGTTTAA+AGG + Chr6:18803005-18803024 MsG0680031353.01.T01:CDS 25.0%
!! TGCAAAGTTTAGATTCTTTT+TGG + Chr6:18805794-18805813 MsG0680031353.01.T01:CDS 25.0%
!! TTGAAGATCTTGTAGATTTT+AGG + Chr6:18806313-18806332 MsG0680031353.01.T01:CDS 25.0%
!! TTTTCAAATGCGAAAAAAAG+TGG + Chr6:18803423-18803442 MsG0680031353.01.T01:CDS 25.0%
!!! CGGTATTTTAGAGTTTAAAA+AGG - Chr6:18803234-18803253 None:intergenic 25.0%
AAACAAGTTTATTAGCGTGA+TGG - Chr6:18803761-18803780 None:intergenic 30.0%
AACAGAAGCTGAAAGAATTA+AGG + Chr6:18804828-18804847 MsG0680031353.01.T01:CDS 30.0%
AACGGTCTAAATTTCAAACT+CGG - Chr6:18803254-18803273 None:intergenic 30.0%
AAGAACAATTTATAGAGCCA+GGG - Chr6:18805654-18805673 None:intergenic 30.0%
AAGAATAATCAAAAGCTAGG+TGG + Chr6:18802425-18802444 MsG0680031353.01.T01:CDS 30.0%
AATTCTTGAAGAATCAATGC+AGG - Chr6:18804902-18804921 None:intergenic 30.0%
AATTGCTGCCACAATTATTA+TGG + Chr6:18806048-18806067 MsG0680031353.01.T01:CDS 30.0%
AGTTATCTTCATTGCTGAAT+TGG + Chr6:18805855-18805874 MsG0680031353.01.T01:CDS 30.0%
ATAAAACTCGAACACAAGAA+GGG + Chr6:18804342-18804361 MsG0680031353.01.T01:CDS 30.0%
ATAAGCAACTACTCAAAAGA+AGG - Chr6:18803341-18803360 None:intergenic 30.0%
ATAGAAAGAGAAAATGCACA+TGG - Chr6:18805003-18805022 None:intergenic 30.0%
ATCAATTCGGTAAACAAGTT+TGG - Chr6:18805767-18805786 None:intergenic 30.0%
ATTAAGGTCTAGAGAAAAAG+AGG + Chr6:18804844-18804863 MsG0680031353.01.T01:CDS 30.0%
ATTATGGTGTGTTTAAGTCA+TGG + Chr6:18806064-18806083 MsG0680031353.01.T01:CDS 30.0%
CAAAAAGTGATCATGAGATT+AGG + Chr6:18804747-18804766 MsG0680031353.01.T01:CDS 30.0%
CATATGTTGGATATTCGTTA+TGG + Chr6:18805128-18805147 MsG0680031353.01.T01:intron 30.0%
CATCTGACATTAGAATTGTT+TGG - Chr6:18804626-18804645 None:intergenic 30.0%
CTTTGATTGTAGATTGCTAA+TGG + Chr6:18803387-18803406 MsG0680031353.01.T01:intron 30.0%
GAAATTTCTTTGCATAGCAT+CGG - Chr6:18805971-18805990 None:intergenic 30.0%
GATGCAAATTTGATCTAGAA+AGG + Chr6:18804534-18804553 MsG0680031353.01.T01:CDS 30.0%
GTAATTATATGTGTCAGTGT+CGG + Chr6:18802689-18802708 MsG0680031353.01.T01:intron 30.0%
TAAAAACCCTAATATTGGTC+GGG - Chr6:18806555-18806574 None:intergenic 30.0%
TAACGACAATAAGATGAACA+AGG + Chr6:18804679-18804698 MsG0680031353.01.T01:CDS 30.0%
TAAGAACAATTTATAGAGCC+AGG - Chr6:18805655-18805674 None:intergenic 30.0%
TAGTTCACCTCTTAAGAAAA+AGG + Chr6:18804718-18804737 MsG0680031353.01.T01:CDS 30.0%
TATGATCATGATTTATGCTG+CGG + Chr6:18806584-18806603 MsG0680031353.01.T01:three_prime_UTR 30.0%
TATGTTGGATATTCGTTATG+GGG + Chr6:18805130-18805149 MsG0680031353.01.T01:intron 30.0%
TCATTTAACACAGGAAAGAT+AGG + Chr6:18805727-18805746 MsG0680031353.01.T01:CDS 30.0%
TCCAATGATCAAATGTTCAA+TGG + Chr6:18804956-18804975 MsG0680031353.01.T01:CDS 30.0%
TCTAATGTCAGATGTAAAAG+AGG + Chr6:18804632-18804651 MsG0680031353.01.T01:CDS 30.0%
TTTCTTAAGAGGTGAACTAA+AGG - Chr6:18804717-18804736 None:intergenic 30.0%
TTTGATCATTGGAACATGTT+AGG - Chr6:18804949-18804968 None:intergenic 30.0%
! ACTACATCATTTTCATGAGA+CGG - Chr6:18804146-18804165 None:intergenic 30.0%
! GAACATATGATAATTTGTGC+TGG + Chr6:18803066-18803085 MsG0680031353.01.T01:intron 30.0%
! GATTGATTCTGTATATCTTG+TGG - Chr6:18803972-18803991 None:intergenic 30.0%
! GATTTATCTCTCTTTGAAGA+TGG - Chr6:18803531-18803550 None:intergenic 30.0%
! TGATTGTGTTACTCTAATAG+AGG + Chr6:18806464-18806483 MsG0680031353.01.T01:three_prime_UTR 30.0%
! TTTTCTCTCAGCTATTTGAT+TGG + Chr6:18802462-18802481 MsG0680031353.01.T01:CDS 30.0%
!! TCATTTTCTGATAGTGATGA+TGG + Chr6:18803561-18803580 MsG0680031353.01.T01:CDS 30.0%
!! TGTTCGAGTTTTATGTTTGA+AGG - Chr6:18804336-18804355 None:intergenic 30.0%
!! TTCTTTTGAGTAGTTGCTTA+TGG + Chr6:18803340-18803359 MsG0680031353.01.T01:intron 30.0%
!! TTTTATTTGAGCTTGTGCTT+TGG + Chr6:18805361-18805380 MsG0680031353.01.T01:intron 30.0%
AAATGTCACTAGGAACAATG+AGG + Chr6:18805885-18805904 MsG0680031353.01.T01:CDS 35.0%
AATAATCAAAAGCTAGGTGG+TGG + Chr6:18802428-18802447 MsG0680031353.01.T01:CDS 35.0%
AATGTCAGATGTAAAAGAGG+AGG + Chr6:18804635-18804654 MsG0680031353.01.T01:CDS 35.0%
ACCTAAAACTTCTTCTCTGA+GGG - Chr6:18804798-18804817 None:intergenic 35.0%
AGCTTTCTTATAGATTGCAG+CGG + Chr6:18803124-18803143 MsG0680031353.01.T01:intron 35.0%
AGTGACTATTGGATTGTGAT+CGG + Chr6:18803182-18803201 MsG0680031353.01.T01:intron 35.0%
ATCTCAGCTTTCATGCATAA+AGG - Chr6:18806108-18806127 None:intergenic 35.0%
ATGTTCTTACCAAATGGAGT+TGG - Chr6:18803052-18803071 None:intergenic 35.0%
ATGTTGGATATTCGTTATGG+GGG + Chr6:18805131-18805150 MsG0680031353.01.T01:intron 35.0%
CAAAATCCCGACCAATATTA+GGG + Chr6:18806546-18806565 MsG0680031353.01.T01:three_prime_UTR 35.0%
CAAGAGTGAGATTAAGAAGT+GGG + Chr6:18806143-18806162 MsG0680031353.01.T01:CDS 35.0%
CATAAAACTCGAACACAAGA+AGG + Chr6:18804341-18804360 MsG0680031353.01.T01:CDS 35.0%
CCATACATGCTTTCAATCTA+AGG - Chr6:18805159-18805178 None:intergenic 35.0%
CGAATAGAAATCCCTTAAGT+TGG - Chr6:18806002-18806021 None:intergenic 35.0%
GAGGGTCATATACAAATTTG+TGG + Chr6:18802925-18802944 MsG0680031353.01.T01:intron 35.0%
GAGTATAAGCAAAAGCTCTT+CGG - Chr6:18805308-18805327 None:intergenic 35.0%
GATTAAGAAGTGGGAATGTA+TGG + Chr6:18806152-18806171 MsG0680031353.01.T01:CDS 35.0%
GCCATTGAACATTTGATCAT+TGG - Chr6:18804960-18804979 None:intergenic 35.0%
GGAAGATGCAAGAAAACATT+TGG - Chr6:18803895-18803914 None:intergenic 35.0%
GTCAGTATTAATGTTGTGCT+TGG + Chr6:18805253-18805272 MsG0680031353.01.T01:intron 35.0%
TACTCTAATAGAGGTCTCTT+GGG + Chr6:18806473-18806492 MsG0680031353.01.T01:three_prime_UTR 35.0%
TAGATTAGAAGAGACTAACC+AGG - Chr6:18802539-18802558 None:intergenic 35.0%
TCAAGAGTGAGATTAAGAAG+TGG + Chr6:18806142-18806161 MsG0680031353.01.T01:CDS 35.0%
TCATCTCCCAATCAATTACT+TGG - Chr6:18806194-18806213 None:intergenic 35.0%
TGCAAGCACATATATTCTTC+TGG - Chr6:18804252-18804271 None:intergenic 35.0%
TGGTCCTACAAATCATATGT+TGG + Chr6:18805115-18805134 MsG0680031353.01.T01:intron 35.0%
TGGTCTTCAATTGAATTCCA+GGG + Chr6:18805617-18805636 MsG0680031353.01.T01:intron 35.0%
TGTTCTTACCAAATGGAGTT+GGG - Chr6:18803051-18803070 None:intergenic 35.0%
TGTTTGAATCAAAGCCTAAG+TGG + Chr6:18804476-18804495 MsG0680031353.01.T01:CDS 35.0%
TTACTCTAATAGAGGTCTCT+TGG + Chr6:18806472-18806491 MsG0680031353.01.T01:three_prime_UTR 35.0%
TTCAATCGAAGCCAACTTAA+GGG + Chr6:18805988-18806007 MsG0680031353.01.T01:CDS 35.0%
TTTCAATCGAAGCCAACTTA+AGG + Chr6:18805987-18806006 MsG0680031353.01.T01:CDS 35.0%
! ATGCATGAAAGCTGAGATTT+TGG + Chr6:18806110-18806129 MsG0680031353.01.T01:CDS 35.0%
! ATTGGTAGGACACTTTGAAA+TGG - Chr6:18803916-18803935 None:intergenic 35.0%
! CACATATATTCTTCTGGAAG+TGG - Chr6:18804246-18804265 None:intergenic 35.0%
! CCTTAGATTGAAAGCATGTA+TGG + Chr6:18805156-18805175 MsG0680031353.01.T01:intron 35.0%
! CTAATATTGGTCGGGATTTT+GGG - Chr6:18806547-18806566 None:intergenic 35.0%
! GATCTTGTAGATTTTAGGCA+TGG + Chr6:18806318-18806337 MsG0680031353.01.T01:CDS 35.0%
! GATGCTCTCTTTAGATTTTG+AGG + Chr6:18802774-18802793 MsG0680031353.01.T01:intron 35.0%
! GTCTCTTCCTTTTTCTTAAG+AGG - Chr6:18804728-18804747 None:intergenic 35.0%
! TCAAAGTGTCCTACCAATAA+CGG + Chr6:18803918-18803937 MsG0680031353.01.T01:CDS 35.0%
! TCAATGTATTGATGGCATGT+CGG - Chr6:18805185-18805204 None:intergenic 35.0%
! TTCATTGCTGAATTGGTTCT+TGG + Chr6:18805862-18805881 MsG0680031353.01.T01:CDS 35.0%
! TTGGTCTTCAATTGAATTCC+AGG + Chr6:18805616-18805635 MsG0680031353.01.T01:intron 35.0%
! TTTCGACATTGAAGCTTTTG+AGG + Chr6:18806239-18806258 MsG0680031353.01.T01:CDS 35.0%
!! GACATCATCCTTTGTTTCTA+CGG + Chr6:18805409-18805428 MsG0680031353.01.T01:intron 35.0%
!! TTTTGAGTAGTTGCTTATGG+TGG + Chr6:18803343-18803362 MsG0680031353.01.T01:intron 35.0%
!! TTTTTGTTGTGAACTGTGAC+AGG + Chr6:18802969-18802988 MsG0680031353.01.T01:intron 35.0%
AAAAAACTTCTTCCTCCTCC+TGG + Chr6:18802518-18802537 MsG0680031353.01.T01:CDS 40.0%
AAGAAGTGGGAATGTATGGT+TGG + Chr6:18806156-18806175 MsG0680031353.01.T01:CDS 40.0%
AAGAGTCCGAGAATTTCTTC+GGG + Chr6:18803789-18803808 MsG0680031353.01.T01:CDS 40.0%
AATGGTAATCATCTCAGTCC+TGG + Chr6:18805478-18805497 MsG0680031353.01.T01:CDS 40.0%
ACAGACACAAACATTGGACA+TGG + Chr6:18802624-18802643 MsG0680031353.01.T01:intron 40.0%
ACCAAAGACATTAAAGCGAG+AGG - Chr6:18805601-18805620 None:intergenic 40.0%
ACCAAATGGAGTTGGGAATT+AGG - Chr6:18803044-18803063 None:intergenic 40.0%
ACTATTGGATTGTGATCGGA+CGG + Chr6:18803186-18803205 MsG0680031353.01.T01:intron 40.0%
ACTGGTATCCGTAGAAACAA+AGG - Chr6:18805420-18805439 None:intergenic 40.0%
ACTTCTCGATGAACTCAACA+TGG + Chr6:18805942-18805961 MsG0680031353.01.T01:CDS 40.0%
AGAGGTGAACTAAAGGTAGA+TGG - Chr6:18804710-18804729 None:intergenic 40.0%
AGATCAAAGCTACGAATGCA+AGG + Chr6:18803598-18803617 MsG0680031353.01.T01:CDS 40.0%
ATCAACCTAGCTACAAGACT+TGG - Chr6:18803492-18803511 None:intergenic 40.0%
ATCAATGCAGGTGATCTTTC+AGG - Chr6:18804890-18804909 None:intergenic 40.0%
ATGCAAGAAATGAGAAGCTG+TGG - Chr6:18805922-18805941 None:intergenic 40.0%
ATTAGAAGAGACTAACCAGG+AGG - Chr6:18802536-18802555 None:intergenic 40.0%
ATTTGAGCTTGTGCTTTGGT+TGG + Chr6:18805365-18805384 MsG0680031353.01.T01:intron 40.0%
CACCTAAAACTTCTTCTCTG+AGG - Chr6:18804799-18804818 None:intergenic 40.0%
CAGTGTGAGACAAATCATGT+TGG + Chr6:18805436-18805455 MsG0680031353.01.T01:intron 40.0%
CATGAGTTATGATCTTCTCC+TGG - Chr6:18804181-18804200 None:intergenic 40.0%
CCAAAATCCCGACCAATATT+AGG + Chr6:18806545-18806564 MsG0680031353.01.T01:three_prime_UTR 40.0%
CCTAAAACTTCTTCTCTGAG+GGG - Chr6:18804797-18804816 None:intergenic 40.0%
CTCTAAGTTGTTCATGCAAC+AGG + Chr6:18806379-18806398 MsG0680031353.01.T01:three_prime_UTR 40.0%
CTCTTTCCCGAAGAAATTCT+CGG - Chr6:18803798-18803817 None:intergenic 40.0%
CTGATGCACAAGGAGAAAAA+AGG + Chr6:18804579-18804598 MsG0680031353.01.T01:CDS 40.0%
CTGTTGCATGAACAACTTAG+AGG - Chr6:18806381-18806400 None:intergenic 40.0%
GAAATTCTCGGACTCTTCAA+AGG - Chr6:18803786-18803805 None:intergenic 40.0%
GAAGAGTCCGAGAATTTCTT+CGG + Chr6:18803788-18803807 MsG0680031353.01.T01:CDS 40.0%
GAGATGATTACCATTGCAAG+AGG - Chr6:18805473-18805492 None:intergenic 40.0%
GAGCATACGTGCAAAAATTG+CGG + Chr6:18804026-18804045 MsG0680031353.01.T01:CDS 40.0%
GCTACTAAGATCTTAGAACC+TGG + Chr6:18803849-18803868 MsG0680031353.01.T01:CDS 40.0%
GTCTAGAGAAAAAGAGGAGT+TGG + Chr6:18804850-18804869 MsG0680031353.01.T01:CDS 40.0%
TAACGGCATTGTGACAGAAA+TGG + Chr6:18803935-18803954 MsG0680031353.01.T01:CDS 40.0%
TAAGTGGTCGAACTTGGATA+AGG + Chr6:18804492-18804511 MsG0680031353.01.T01:CDS 40.0%
TAGATTGCTAATGGGAACAG+TGG + Chr6:18803396-18803415 MsG0680031353.01.T01:intron 40.0%
TCCTCTCGCTTTAATGTCTT+TGG + Chr6:18805597-18805616 MsG0680031353.01.T01:intron 40.0%
TCCTGTGTTAAATGATGCTG+CGG - Chr6:18805722-18805741 None:intergenic 40.0%
TCGGATACAGACACAAACAT+TGG + Chr6:18802618-18802637 MsG0680031353.01.T01:intron 40.0%
TCTGGCATAGACAAGTCATT+GGG + Chr6:18804002-18804021 MsG0680031353.01.T01:CDS 40.0%
TGAGTCACTCATTGGGAAAA+TGG + Chr6:18806211-18806230 MsG0680031353.01.T01:CDS 40.0%
TGGTTCTTGGAAATGTCACT+AGG + Chr6:18805875-18805894 MsG0680031353.01.T01:CDS 40.0%
TGTTTAAGTCATGGTGTGCA+TGG + Chr6:18806073-18806092 MsG0680031353.01.T01:CDS 40.0%
TTATCCAAGTTCGACCACTT+AGG - Chr6:18804493-18804512 None:intergenic 40.0%
TTATTCGGAACCTCTTGCAA+TGG + Chr6:18805460-18805479 MsG0680031353.01.T01:CDS 40.0%
TTCTGGCATAGACAAGTCAT+TGG + Chr6:18804001-18804020 MsG0680031353.01.T01:CDS 40.0%
TTCTGTCACAATGCCGTTAT+TGG - Chr6:18803934-18803953 None:intergenic 40.0%
TTGCATCTATCTGCCTTAGT+AGG - Chr6:18804521-18804540 None:intergenic 40.0%
TTGGATAAGGTCTCCTACTA+AGG + Chr6:18804505-18804524 MsG0680031353.01.T01:CDS 40.0%
! AAGTCTTGTAGCTAGGTTGA+TGG + Chr6:18803491-18803510 MsG0680031353.01.T01:CDS 40.0%
! AGTGATGATGCTAGTGTGAA+TGG + Chr6:18802374-18802393 MsG0680031353.01.T01:CDS 40.0%
! CAACATGATTTGTCTCACAC+TGG - Chr6:18805438-18805457 None:intergenic 40.0%
! CCTAATATTGGTCGGGATTT+TGG - Chr6:18806548-18806567 None:intergenic 40.0%
! GAAAAAGAGGAGTTGGTTAC+TGG + Chr6:18804857-18804876 MsG0680031353.01.T01:CDS 40.0%
! GCGAAAACATCTGAAACAAC+AGG - Chr6:18804080-18804099 None:intergenic 40.0%
!! ACAACTAAAAGCACTGTGAG+TGG + Chr6:18804437-18804456 MsG0680031353.01.T01:CDS 40.0%
!! ACTTGAGGTTGGTAGTGTAA+AGG + Chr6:18802752-18802771 MsG0680031353.01.T01:intron 40.0%
!! AGTCTTGTAGCTAGGTTGAT+GGG + Chr6:18803492-18803511 MsG0680031353.01.T01:CDS 40.0%
!! TGGAAACTGATGAGAGTGTT+TGG + Chr6:18802945-18802964 MsG0680031353.01.T01:intron 40.0%
!! TTCTGATAGTGATGATGGTG+AGG + Chr6:18803566-18803585 MsG0680031353.01.T01:CDS 40.0%
!!! AGCTGAGATTTTGGTTCAAG+AGG + Chr6:18806119-18806138 MsG0680031353.01.T01:CDS 40.0%
!!! AGGAGGAGGAAGAAGTTTTT+TGG - Chr6:18802519-18802538 None:intergenic 40.0%
AAAGCCTAAGTGGTCGAACT+TGG + Chr6:18804486-18804505 MsG0680031353.01.T01:CDS 45.0%
AATGGCAAATGTCCGAAGGT+TGG + Chr6:18804974-18804993 MsG0680031353.01.T01:intron 45.0%
AGAAGAGCAGTGACTAGGTT+TGG + Chr6:18803666-18803685 MsG0680031353.01.T01:CDS 45.0%
AGAGTACATCTCGAAGCTCA+AGG + Chr6:18803814-18803833 MsG0680031353.01.T01:CDS 45.0%
AGCCATAGGTCAAGTTCGAA+CGG - Chr6:18803272-18803291 None:intergenic 45.0%
AGGAAACCTTCAAGCAGACA+AGG + Chr6:18804554-18804573 MsG0680031353.01.T01:CDS 45.0%
ATTGCTAATGGGAACAGTGG+AGG + Chr6:18803399-18803418 MsG0680031353.01.T01:CDS 45.0%
CATGTTTCAACCGTTCAGGT+TGG - Chr6:18805681-18805700 None:intergenic 45.0%
CCTGAACGGTTGAAACATGA+AGG + Chr6:18805682-18805701 MsG0680031353.01.T01:CDS 45.0%
CCTTCATGTTTCAACCGTTC+AGG - Chr6:18805685-18805704 None:intergenic 45.0%
CGCTGATGCTGAAGAGAAAT+CGG - Chr6:18804102-18804121 None:intergenic 45.0%
CTGGCATAGACAAGTCATTG+GGG + Chr6:18804003-18804022 MsG0680031353.01.T01:CDS 45.0%
GCCTAATTCCCAACTCCATT+TGG + Chr6:18803040-18803059 MsG0680031353.01.T01:CDS 45.0%
GTCAACACATCAGAAGCCAT+AGG - Chr6:18803286-18803305 None:intergenic 45.0%
GTCAACACGTCAGTGACTAT+TGG + Chr6:18803171-18803190 MsG0680031353.01.T01:intron 45.0%
GTCACAATGCCGTTATTGGT+AGG - Chr6:18803930-18803949 None:intergenic 45.0%
GTCACTAGGAACAATGAGGA+AGG + Chr6:18805889-18805908 MsG0680031353.01.T01:CDS 45.0%
GTTCAATGGCAAATGTCCGA+AGG + Chr6:18804970-18804989 MsG0680031353.01.T01:CDS 45.0%
GTTCTTACGACCAACCTGAA+CGG + Chr6:18805668-18805687 MsG0680031353.01.T01:CDS 45.0%
TAAGCTACGAACCACCAACA+CGG - Chr6:18805282-18805301 None:intergenic 45.0%
TAGTATCACGCACTTGAGGT+TGG + Chr6:18802741-18802760 MsG0680031353.01.T01:intron 45.0%
TCAGAACCTTGTCTGCTTGA+AGG - Chr6:18804563-18804582 None:intergenic 45.0%
TCCGCAGCATCATTTAACAC+AGG + Chr6:18805718-18805737 MsG0680031353.01.T01:CDS 45.0%
TCTTCCAGTAGTCTCGATGA+AGG + Chr6:18805523-18805542 MsG0680031353.01.T01:CDS 45.0%
TGACAGAAATGGCTGGAACT+CGG + Chr6:18803946-18803965 MsG0680031353.01.T01:CDS 45.0%
TGCACATGGAAACCAACCTT+CGG - Chr6:18804989-18805008 None:intergenic 45.0%
TGGCATAGACAAGTCATTGG+GGG + Chr6:18804004-18804023 MsG0680031353.01.T01:CDS 45.0%
TGGGAGATGAGTCACTCATT+GGG + Chr6:18806204-18806223 MsG0680031353.01.T01:CDS 45.0%
TGTAGTTCTTCTCAGAAGCC+AGG + Chr6:18804160-18804179 MsG0680031353.01.T01:CDS 45.0%
TTCGTAGTATCACGCACTTG+AGG + Chr6:18802737-18802756 MsG0680031353.01.T01:intron 45.0%
TTGGGAGATGAGTCACTCAT+TGG + Chr6:18806203-18806222 MsG0680031353.01.T01:CDS 45.0%
! AAGCACCAAGTCTTGTAGCT+AGG + Chr6:18803484-18803503 MsG0680031353.01.T01:CDS 45.0%
! AAGCTAGGTGGTGGTTGTAT+TGG + Chr6:18802437-18802456 MsG0680031353.01.T01:CDS 45.0%
! AGACAAGGTTCTGATGCACA+AGG + Chr6:18804569-18804588 MsG0680031353.01.T01:CDS 45.0%
! AGAGGTCTCTTGGGATCTTT+TGG + Chr6:18806482-18806501 MsG0680031353.01.T01:three_prime_UTR 45.0%
! CCCCTCAGAGAAGAAGTTTT+AGG + Chr6:18804794-18804813 MsG0680031353.01.T01:CDS 45.0%
! GATCTTAGAACCTGGTTTGC+AGG + Chr6:18803857-18803876 MsG0680031353.01.T01:CDS 45.0%
!! CGACATTGAAGCTTTTGAGG+CGG + Chr6:18806242-18806261 MsG0680031353.01.T01:CDS 45.0%
!! TGATGATGGTGAGGAGTCTT+TGG + Chr6:18803575-18803594 MsG0680031353.01.T01:CDS 45.0%
!! TTTGAGGCGGGTGTTGATAT+TGG + Chr6:18806255-18806274 MsG0680031353.01.T01:CDS 45.0%
!!! GACATTGAAGCTTTTGAGGC+GGG + Chr6:18806243-18806262 MsG0680031353.01.T01:CDS 45.0%
AAGACTGACAGAGAGCAAGC+TGG + Chr6:18805819-18805838 MsG0680031353.01.T01:CDS 50.0%
ACGAGAGAAGAGCAGTGACT+AGG + Chr6:18803661-18803680 MsG0680031353.01.T01:CDS 50.0%
AGAAGAGACTAACCAGGAGG+AGG - Chr6:18802533-18802552 None:intergenic 50.0%
AGTAGTCTCGATGAAGGCTC+AGG + Chr6:18805529-18805548 MsG0680031353.01.T01:CDS 50.0%
AGTCAAGGCCTCAGAAGCTT+CGG + Chr6:18803625-18803644 MsG0680031353.01.T01:CDS 50.0%
CATGGAGGCTTAGAGGATGA+TGG + Chr6:18804296-18804315 MsG0680031353.01.T01:CDS 50.0%
CGAATGCAAGGCATGAGTCA+AGG + Chr6:18803610-18803629 MsG0680031353.01.T01:CDS 50.0%
CTGTTTGTAGCCTGCAAACC+AGG - Chr6:18803870-18803889 None:intergenic 50.0%
GACCGTTCGAACTTGACCTA+TGG + Chr6:18803267-18803286 MsG0680031353.01.T01:intron 50.0%
GATGCTTCCAAGACTGATCC+AGG - Chr6:18805499-18805518 None:intergenic 50.0%
GCCTCAGAAGCTTCGGAAAA+CGG + Chr6:18803632-18803651 MsG0680031353.01.T01:CDS 50.0%
GGCATTGTGACAGAAATGGC+TGG + Chr6:18803939-18803958 MsG0680031353.01.T01:CDS 50.0%
GTCATGGTGTGCATGGACAA+AGG + Chr6:18806080-18806099 MsG0680031353.01.T01:CDS 50.0%
GTGGGAATGTATGGTTGGCA+TGG + Chr6:18806161-18806180 MsG0680031353.01.T01:CDS 50.0%
TCAGAAGCTTCGGAAAACGG+AGG + Chr6:18803635-18803654 MsG0680031353.01.T01:CDS 50.0%
TCATCCTCTAAGCCTCCATG+CGG - Chr6:18804296-18804315 None:intergenic 50.0%
TCTCAGTCCTGGATCAGTCT+TGG + Chr6:18805489-18805508 MsG0680031353.01.T01:CDS 50.0%
TGAGCCTTCATCGAGACTAC+TGG - Chr6:18805530-18805549 None:intergenic 50.0%
TGAGGGGTCGATGATGTCTT+TGG - Chr6:18804781-18804800 None:intergenic 50.0%
! CAGTGTCGGACATGTGTTCA+AGG + Chr6:18802703-18802722 MsG0680031353.01.T01:intron 50.0%
! TCCGTTTTCCGAAGCTTCTG+AGG - Chr6:18803636-18803655 None:intergenic 50.0%
CAAACCGCATGGAGGCTTAG+AGG + Chr6:18804289-18804308 MsG0680031353.01.T01:CDS 55.0%
CCAGGGTGAAAACAATGCCC+TGG - Chr6:18805637-18805656 None:intergenic 55.0%
GATTCATCGCGCAAACCGCA+TGG + Chr6:18804278-18804297 MsG0680031353.01.T01:CDS 55.0%
!! GTTGTGCTTGGTGTCCGTGT+TGG + Chr6:18805265-18805284 MsG0680031353.01.T01:intron 55.0%
!!! CCAGGGCATTGTTTTCACCC+TGG + Chr6:18805634-18805653 MsG0680031353.01.T01:intron 55.0%
TCATCGCGCAAACCGCATGG+AGG + Chr6:18804281-18804300 MsG0680031353.01.T01:CDS 60.0%
!! GTGCTTGGTGTCCGTGTTGG+TGG + Chr6:18805268-18805287 MsG0680031353.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 18802294 18806643 18802294 ID=MsG0680031353.01;Name=MsG0680031353.01
Chr6 mRNA 18802294 18806643 18802294 ID=MsG0680031353.01.T01;Parent=MsG0680031353.01;Name=MsG0680031353.01.T01;_AED=0.08;_eAED=0.08;_QI=77|1|1|1|1|1|5|293|885
Chr6 exon 18802294 18802539 18802294 ID=MsG0680031353.01.T01:exon:12534;Parent=MsG0680031353.01.T01
Chr6 exon 18802991 18803061 18802991 ID=MsG0680031353.01.T01:exon:12535;Parent=MsG0680031353.01.T01
Chr6 exon 18803399 18804991 18803399 ID=MsG0680031353.01.T01:exon:12536;Parent=MsG0680031353.01.T01
Chr6 exon 18805439 18805550 18805439 ID=MsG0680031353.01.T01:exon:12537;Parent=MsG0680031353.01.T01
Chr6 exon 18805638 18806643 18805638 ID=MsG0680031353.01.T01:exon:12538;Parent=MsG0680031353.01.T01
Chr6 five_prime_UTR 18802294 18802370 18802294 ID=MsG0680031353.01.T01:five_prime_utr;Parent=MsG0680031353.01.T01
Chr6 CDS 18802371 18802539 18802371 ID=MsG0680031353.01.T01:cds;Parent=MsG0680031353.01.T01
Chr6 CDS 18802991 18803061 18802991 ID=MsG0680031353.01.T01:cds;Parent=MsG0680031353.01.T01
Chr6 CDS 18803399 18804991 18803399 ID=MsG0680031353.01.T01:cds;Parent=MsG0680031353.01.T01
Chr6 CDS 18805439 18805550 18805439 ID=MsG0680031353.01.T01:cds;Parent=MsG0680031353.01.T01
Chr6 CDS 18805638 18806350 18805638 ID=MsG0680031353.01.T01:cds;Parent=MsG0680031353.01.T01
Chr6 three_prime_UTR 18806351 18806643 18806351 ID=MsG0680031353.01.T01:three_prime_utr;Parent=MsG0680031353.01.T01
Gene Sequence

>MsG0680031353.01.T01

ATGAGTGATGATGCTAGTGTGAATGGTTCTTCTTGTTTAGCAATAACTGAGAAGAAGAATAATCAAAAGCTAGGTGGTGGTTGTATTGGAATTTTCTCTCAGCTATTTGATTGGAATAGTAGACTCACAAAGAAGAGATTTTTCACCAAAAAACTTCTTCCTCCTCCTGGTAGTGCAAAACAAGATTCTTTGAAGAAGTTTAAAGGAGATGACAAAATGCCTAATTCCCAACTCCATTTGATTGCTAATGGGAACAGTGGAGGTTTTTCAAATGCGAAAAAAAGTGGGAATTGTGTTATAGAAGTAGAACAAAAGCATGAAATGAAAGCACCAAGTCTTGTAGCTAGGTTGATGGGTCTAGAATCAATTCCATCTTCAAAGAGAGATAAATCCAATAAATCTTCATTTTCTGATAGTGATGATGGTGAGGAGTCTTTGGAGATCAAAGCTACGAATGCAAGGCATGAGTCAAGGCCTCAGAAGCTTCGGAAAACGGAGGCGAACGAGAGAAGAGCAGTGACTAGGTTTGGTGCTGATGCATTGCAAATCAAGAGTGTTTTGTCACAAGTGAAAAGATATAATCATCATCGTCACAATCACCATCACGCTAATAAACTTGTTTCGCCTTTGAAGAGTCCGAGAATTTCTTCGGGAAAGAGTACATCTCGAAGCTCAAGGTTGATAGACGCAGCTACTAAGATCTTAGAACCTGGTTTGCAGGCTACAAACAGATCCAAATGTTTTCTTGCATCTTCCATTTCAAAGTGTCCTACCAATAACGGCATTGTGACAGAAATGGCTGGAACTCGGCCACAAGATATACAGAATCAATCATGTTATAATTCTGGCATAGACAAGTCATTGGGGGAGCATACGTGCAAAAATTGCGGCAATTCGCTTGATGTTGAGATCAGAAGACCTGTTGTTTCAGATGTTTTCGCCGATTTCTCTTCAGCATCAGCGAAAAACGAAAGATCATTCATACCGTCTCATGAAAATGATGTAGTTCTTCTCAGAAGCCAGGAGAAGATCATAACTCATGTTGATGATGATGTTAAAAAGAATGCTTATGCTTGTAATGAATCCACTTCCAGAAGAATATATGTGCTTGCAAAATGCGATTCATCGCGCAAACCGCATGGAGGCTTAGAGGATGATGGTGTATCGTCTTTTTCCTTCAAACATAAAACTCGAACACAAGAAGGGATGTTAAGCAATGAAAGAATATCATTTGAATCTAGAAATAGTAATATGCAAGAGAAGAGAGTCTCATCAGCTACAACTAAAAGCACTGTGAGTGGAAATAAAGACTTTGTTTGTTTGAATCAAAGCCTAAGTGGTCGAACTTGGATAAGGTCTCCTACTAAGGCAGATAGATGCAAATTTGATCTAGAAAGGAAACCTTCAAGCAGACAAGGTTCTGATGCACAAGGAGAAAAAAGGAAGAATTTTGACGCTTTCTCTCCAAACAATTCTAATGTCAGATGTAAAAGAGGAGGTTATCTAAAAACCGATAAGATTAACGACAATAAGATGAACAAGGTAGTACCATCTACCTTTAGTTCACCTCTTAAGAAAAAGGAAGAGACAAAAAGTGATCATGAGATTAGGACATGTTTCCAAAGACATCATCGACCCCTCAGAGAAGAAGTTTTAGGTGCTTTTCTAGAACAGAAGCTGAAAGAATTAAGGTCTAGAGAAAAAGAGGAGTTGGTTACTGGTGATCAACCTGAAAGATCACCTGCATTGATTCTTCAAGAATTGATATCTGTTCTGAATGCAAAGCACCTAACATGTTCCAATGATCAAATGTTCAATGGCAAATGTCCGAAGTGTGAGACAAATCATGTTGGATTATTCGGAACCTCTTGCAATGGTAATCATCTCAGTCCTGGATCAGTCTTGGAAGCATCTTTTTCTTCCAGTAGTCTCGATGAAGGCTCAGGGCATTGTTTTCACCCTGGCTCTATAAATTGTTCTTACGACCAACCTGAACGGTTGAAACATGAAGGCGAACTTTTCGATTCCGCAGCATCATTTAACACAGGAAAGATAGGTTGTAAGATACTGACCAAACTTGTTTACCGAATTGATAAGATATTGCAAAGTTTAGATTCTTTTTGGACAAGACTGACAGAGAGCAAGCTGGATCATATGAAAGAAGTTATCTTCATTGCTGAATTGGTTCTTGGAAATGTCACTAGGAACAATGAGGAAGGAGTGTTGCCACAGCTTCTCATTTCTTGCATACTTCTCGATGAACTCAACATGGCAACCGATGCTATGCAAAGAAATTTCAATCGAAGCCAACTTAAGGGATTTCTATTCGATTGTGTAATAGAGTATCTAGAATCAAATTGCTGCCACAATTATTATGGTGTGTTTAAGTCATGGTGTGCATGGACAAAGGCTCCTTTATGCATGAAAGCTGAGATTTTGGTTCAAGAGGTCAAGAGTGAGATTAAGAAGTGGGAATGTATGGTTGGCATGGAACTAAACCAAGTAATTGATTGGGAGATGAGTCACTCATTGGGAAAATGGACTGATTTCGACATTGAAGCTTTTGAGGCGGGTGTTGATATTGGTGAAGATGTGCTTCAAATTTTGGTCGATGAAATTGTTGAAGATCTTGTAGATTTTAGGCATGGTACTATTTGA
Protein sequence

>MsG0680031353.01.T01

MSDDASVNGSSCLAITEKKNNQKLGGGCIGIFSQLFDWNSRLTKKRFFTKKLLPPPGSAKQDSLKKFKGDDKMPNSQLHLIANGNSGGFSNAKKSGNCVIEVEQKHEMKAPSLVARLMGLESIPSSKRDKSNKSSFSDSDDGEESLEIKATNARHESRPQKLRKTEANERRAVTRFGADALQIKSVLSQVKRYNHHRHNHHHANKLVSPLKSPRISSGKSTSRSSRLIDAATKILEPGLQATNRSKCFLASSISKCPTNNGIVTEMAGTRPQDIQNQSCYNSGIDKSLGEHTCKNCGNSLDVEIRRPVVSDVFADFSSASAKNERSFIPSHENDVVLLRSQEKIITHVDDDVKKNAYACNESTSRRIYVLAKCDSSRKPHGGLEDDGVSSFSFKHKTRTQEGMLSNERISFESRNSNMQEKRVSSATTKSTVSGNKDFVCLNQSLSGRTWIRSPTKADRCKFDLERKPSSRQGSDAQGEKRKNFDAFSPNNSNVRCKRGGYLKTDKINDNKMNKVVPSTFSSPLKKKEETKSDHEIRTCFQRHHRPLREEVLGAFLEQKLKELRSREKEELVTGDQPERSPALILQELISVLNAKHLTCSNDQMFNGKCPKCETNHVGLFGTSCNGNHLSPGSVLEASFSSSSLDEGSGHCFHPGSINCSYDQPERLKHEGELFDSAASFNTGKIGCKILTKLVYRIDKILQSLDSFWTRLTESKLDHMKEVIFIAELVLGNVTRNNEEGVLPQLLISCILLDELNMATDAMQRNFNRSQLKGFLFDCVIEYLESNCCHNYYGVFKSWCAWTKAPLCMKAEILVQEVKSEIKKWECMVGMELNQVIDWEMSHSLGKWTDFDIEAFEAGVDIGEDVLQILVDEIVEDLVDFRHGTI*