AlfalfaGEDB | MsG0880043034.01

M. sativa cultivar ZhongmuNo.1 / MsG0880043034.01

KEGG: K11253
GO: GO:0000786 GO:0003677 GO:0046982
PFAM: PF00125

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880043034.01.T01	XP_013444661.1	51.795	195	22	6	1	193	1	125	3.50E-40	143

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880043034.01.T01	Q8RVQ9	39.85	133	34	6	64	193	84	173	1.31E-14	71.6

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880043034.01.T01	G8A083	51.795	195	22	6	1	193	1	125	1.67e-40	143

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047814.01	MsG0880043034.01	0.812467	4.178389e-51	2.658918e-48
MsG0080048113.01	MsG0880043034.01	0.808823	2.562597e-50	1.480044e-47
MsG0080048291.01	MsG0880043034.01	0.806275	8.901985e-50	4.811937e-47
MsG0080048856.01	MsG0880043034.01	0.840215	9.946052e-58	1.407046e-54
MsG0080049140.01	MsG0880043034.01	0.841638	4.209705e-58	6.224237e-55
MsG0180000139.01	MsG0880043034.01	0.811632	6.352455e-51	3.952201e-48
MsG0180000145.01	MsG0880043034.01	0.809324	2.001975e-50	1.171872e-47
MsG0180000178.01	MsG0880043034.01	0.802805	4.713526e-49	2.330716e-46
MsG0180000324.01	MsG0880043034.01	0.812471	4.168734e-51	2.653080e-48
MsG0180000334.01	MsG0880043034.01	0.805158	1.527622e-49	8.024166e-47
MsG0180000353.01	MsG0880043034.01	0.818800	1.622735e-52	1.226832e-49
MsG0180000470.01	MsG0880043034.01	0.802737	4.867547e-49	2.402676e-46
MsG0180000557.01	MsG0880043034.01	0.805869	1.083916e-49	5.798570e-47
MsG0180000836.01	MsG0880043034.01	0.807836	4.160839e-50	2.341639e-47
MsG0180001892.01	MsG0880043034.01	0.814578	1.434922e-51	9.664518e-49
MsG0180002895.01	MsG0880043034.01	0.800444	1.436923e-48	6.691804e-46
MsG0180003361.01	MsG0880043034.01	0.817452	3.273175e-52	2.384758e-49
MsG0180003371.01	MsG0880043034.01	0.808994	2.356288e-50	1.367087e-47
MsG0180003669.01	MsG0880043034.01	0.803852	2.860034e-49	1.452665e-46
MsG0180003786.01	MsG0880043034.01	0.811365	7.261370e-51	4.486089e-48
MsG0180003920.01	MsG0880043034.01	0.878454	2.772803e-69	1.448862e-65
MsG0180003943.01	MsG0880043034.01	0.838364	3.004968e-57	4.015678e-54
MsG0180004049.01	MsG0880043034.01	0.843228	1.594217e-58	2.477671e-55
MsG0180004099.01	MsG0880043034.01	0.836385	9.654719e-57	1.214780e-53
MsG0180004463.01	MsG0880043034.01	0.813837	2.090758e-51	1.380194e-48
MsG0180004482.01	MsG0880043034.01	0.802244	6.150772e-49	2.998149e-46
MsG0180004711.01	MsG0880043034.01	0.819613	1.059324e-52	8.191369e-50
MsG0180004743.01	MsG0880043034.01	0.819552	1.093645e-52	8.442734e-50
MsG0180004754.01	MsG0880043034.01	0.850396	1.744868e-60	3.413365e-57
MsG0180004975.01	MsG0880043034.01	0.814971	1.173863e-51	7.990569e-49
MsG0180005024.01	MsG0880043034.01	0.814414	1.559411e-51	1.045747e-48
MsG0180005025.01	MsG0880043034.01	0.805599	1.234718e-49	6.559337e-47
MsG0180005049.01	MsG0880043034.01	0.801240	9.886377e-49	4.697899e-46
MsG0180005575.01	MsG0880043034.01	0.838116	3.482000e-57	4.617848e-54
MsG0180005664.01	MsG0880043034.01	0.812958	3.262415e-51	2.102798e-48
MsG0180006000.01	MsG0880043034.01	0.845874	3.092236e-59	5.226916e-56
MsG0180006024.01	MsG0880043034.01	0.811844	5.711862e-51	3.573794e-48
MsG0280006405.01	MsG0880043034.01	0.804661	1.940873e-49	1.006501e-46
MsG0780040307.01	MsG0880043034.01	0.804555	2.042414e-49	1.056227e-46
MsG0780040841.01	MsG0880043034.01	0.829224	5.802722e-55	5.902213e-52
MsG0780040926.01	MsG0880043034.01	0.829330	5.468647e-55	5.580159e-52
MsG0780041535.01	MsG0880043034.01	0.864131	1.516141e-64	4.708831e-61
MsG0880041860.01	MsG0880043034.01	0.802301	5.986644e-49	2.922496e-46
MsG0880041896.01	MsG0880043034.01	0.816243	6.114784e-52	4.309865e-49
MsG0880041986.01	MsG0880043034.01	0.825073	5.717657e-54	5.157970e-51
MsG0880042547.01	MsG0880043034.01	0.801866	7.354393e-49	3.550626e-46
MsG0880042836.01	MsG0880043034.01	0.814128	1.803974e-51	1.200289e-48
MsG0880042939.01	MsG0880043034.01	0.828120	1.072666e-54	1.056399e-51
MsG0880042961.01	MsG0880043034.01	0.846356	2.286415e-59	3.924983e-56
MsG0880043034.01	MsG0880043479.01	0.814823	1.265905e-51	8.582731e-49
MsG0880043034.01	MsG0880043480.01	0.806666	7.362730e-50	4.019422e-47
MsG0880043034.01	MsG0880043491.01	0.821621	3.663466e-53	2.995655e-50
MsG0880043034.01	MsG0880043516.01	0.815973	7.025225e-52	4.915037e-49
MsG0880043034.01	MsG0880043547.01	0.807932	3.970133e-50	2.239874e-47
MsG0880043034.01	MsG0880043592.01	0.816981	4.178831e-52	3.005559e-49
MsG0880043034.01	MsG0880043614.01	0.827435	1.567043e-54	1.512753e-51
MsG0880043034.01	MsG0880044079.01	0.808815	2.573284e-50	1.485885e-47
MsG0880043034.01	MsG0880044565.01	0.819542	1.099892e-52	8.488648e-50
MsG0880043034.01	MsG0880044574.01	0.811568	6.560053e-51	4.074676e-48
MsG0880043034.01	MsG0880044782.01	0.835028	2.129966e-56	2.572661e-53
MsG0880043034.01	MsG0880045145.01	0.845248	4.570343e-59	7.570505e-56
MsG0880043034.01	MsG0880045372.01	0.810842	9.425343e-51	5.743292e-48
MsG0880043034.01	MsG0880045506.01	0.871959	4.591870e-67	1.887203e-63
MsG0880043034.01	MsG0880045838.01	0.807506	4.889942e-50	2.728520e-47
MsG0880043034.01	MsG0880046012.01	0.837785	4.234879e-57	5.560735e-54
MsG0880043034.01	MsG0880046645.01	0.808395	3.163167e-50	1.806633e-47
MsG0880043034.01	MsG0880046803.01	0.800065	1.716323e-48	7.916460e-46
MsG0880043034.01	MsG0880047120.01	0.819778	9.712117e-53	7.545398e-50
MsG0880043034.01	MsG0880047192.01	0.817985	2.482367e-52	1.835039e-49
MsG0880043034.01	MsG0880047226.01	0.836114	1.131091e-56	1.411647e-53
MsG0880043034.01	MsG0880047470.01	0.815844	7.506676e-52	5.233104e-49
MsG0880043034.01	MsG0880047472.01	0.852285	5.103818e-61	1.061396e-57
MsG0880043034.01	MsG0880047473.01	0.835280	1.839753e-56	2.239281e-53
MsG0880043034.01	MsG0880047666.01	0.809119	2.214676e-50	1.289314e-47
MsG0280010650.01	MsG0880043034.01	0.817405	3.354507e-52	2.440748e-49
MsG0280010778.01	MsG0880043034.01	0.827135	1.849216e-54	1.769472e-51
MsG0280010779.01	MsG0880043034.01	0.826675	2.381405e-54	2.248475e-51
MsG0280010795.01	MsG0880043034.01	0.800683	1.284906e-48	6.020019e-46
MsG0280010907.01	MsG0880043034.01	0.822194	2.699061e-53	2.243308e-50
MsG0280010977.01	MsG0880043034.01	0.801471	8.863642e-49	4.236497e-46
MsG0280010980.01	MsG0880043034.01	0.811937	5.453170e-51	3.420341e-48
MsG0280011003.01	MsG0880043034.01	0.842170	3.045002e-58	4.577800e-55
MsG0280011013.01	MsG0880043034.01	0.849113	3.981943e-60	7.470731e-57
MsG0280011014.01	MsG0880043034.01	0.879769	9.505710e-70	5.219779e-66
MsG0280011124.01	MsG0880043034.01	0.800026	1.747948e-48	8.054238e-46
MsG0280011154.01	MsG0880043034.01	0.816828	4.522140e-52	3.238629e-49
MsG0280011258.01	MsG0880043034.01	0.834861	2.346235e-56	2.819793e-53
MsG0280011282.01	MsG0880043034.01	0.839637	1.406960e-57	1.954830e-54
MsG0280011341.01	MsG0880043034.01	0.811611	6.419821e-51	3.991917e-48
MsG0280011388.01	MsG0880043034.01	0.813473	2.515115e-51	1.644078e-48
MsG0280011416.01	MsG0880043034.01	0.821591	3.721181e-53	3.040282e-50
MsG0380011501.01	MsG0880043034.01	0.800557	1.362904e-48	6.365246e-46
MsG0380012471.01	MsG0880043034.01	0.837591	4.748078e-57	6.196986e-54
MsG0380013475.01	MsG0880043034.01	0.837521	4.949918e-57	6.446756e-54
MsG0380014289.01	MsG0880043034.01	0.828342	9.484058e-55	9.399914e-52
MsG0380014387.01	MsG0880043034.01	0.848690	5.218840e-60	9.656279e-57
MsG0380014681.01	MsG0880043034.01	0.808416	3.131488e-50	1.789479e-47
MsG0380014703.01	MsG0880043034.01	0.854506	1.176328e-61	2.633087e-58
MsG0680030881.01	MsG0880043034.01	0.810163	1.321620e-50	7.908995e-48
MsG0680030949.01	MsG0880043034.01	0.855920	4.561997e-62	1.070287e-58
MsG0680031214.01	MsG0880043034.01	0.842331	2.760945e-58	4.172233e-55
MsG0680031353.01	MsG0880043034.01	0.841590	4.333884e-58	6.398503e-55
MsG0680031506.01	MsG0880043034.01	0.852355	4.873697e-61	1.015681e-57
MsG0680031628.01	MsG0880043034.01	0.806396	8.397018e-50	4.552589e-47
MsG0680034842.01	MsG0880043034.01	0.809219	2.108452e-50	1.230766e-47
MsG0680034853.01	MsG0880043034.01	0.838981	2.082237e-57	2.835422e-54
MsG0680035475.01	MsG0880043034.01	0.808852	2.526571e-50	1.460321e-47
MsG0480018894.01	MsG0880043034.01	0.813458	2.533884e-51	1.655742e-48
MsG0480018919.01	MsG0880043034.01	0.821695	3.521783e-53	2.886006e-50
MsG0480019350.01	MsG0880043034.01	0.824783	6.692581e-54	5.987785e-51
MsG0480019710.01	MsG0880043034.01	0.844721	6.345615e-59	1.033646e-55
MsG0480019922.01	MsG0880043034.01	0.850056	2.172425e-60	4.202937e-57
MsG0480020402.01	MsG0880043034.01	0.800156	1.644983e-48	7.604561e-46
MsG0480020495.01	MsG0880043034.01	0.808553	2.926443e-50	1.678317e-47
MsG0480020739.01	MsG0880043034.01	0.806720	7.170895e-50	3.920445e-47
MsG0480020780.01	MsG0880043034.01	0.829739	4.348597e-55	4.490605e-52
MsG0480020879.01	MsG0880043034.01	0.850136	2.064147e-60	4.003080e-57
MsG0480020909.01	MsG0880043034.01	0.825227	5.259065e-54	4.765033e-51
MsG0480022045.01	MsG0880043034.01	0.818067	2.378582e-52	1.762249e-49
MsG0480022164.01	MsG0880043034.01	0.807263	5.505010e-50	3.052376e-47
MsG0480022325.01	MsG0880043034.01	0.806428	8.266323e-50	4.485640e-47
MsG0480022549.01	MsG0880043034.01	0.848561	5.666394e-60	1.044011e-56
MsG0480022620.01	MsG0880043034.01	0.830228	3.304665e-55	3.460884e-52
MsG0480023262.01	MsG0880043034.01	0.807480	4.952781e-50	2.761637e-47
MsG0480023463.01	MsG0880043034.01	0.871196	8.217737e-67	3.285778e-63
MsG0480023500.01	MsG0880043034.01	0.802390	5.740509e-49	2.808671e-46
MsG0480023600.01	MsG0880043034.01	0.800618	1.324364e-48	6.194874e-46
MsG0480023620.01	MsG0880043034.01	0.803503	3.380161e-49	1.701500e-46
MsG0580024165.01	MsG0880043034.01	0.801591	8.376862e-49	4.015822e-46
MsG0580024330.01	MsG0880043034.01	0.811482	6.848564e-51	4.244352e-48
MsG0580024382.01	MsG0880043034.01	0.818821	1.604773e-52	1.213972e-49
MsG0580024489.01	MsG0880043034.01	0.868621	5.699655e-66	2.075550e-62
MsG0580025352.01	MsG0880043034.01	0.806584	7.661393e-50	4.173910e-47
MsG0580025614.01	MsG0880043034.01	0.841026	6.097533e-58	8.844547e-55
MsG0580026059.01	MsG0880043034.01	0.832338	1.000797e-55	1.115173e-52
MsG0380015332.01	MsG0880043034.01	0.816970	4.201743e-52	3.021198e-49
MsG0380015463.01	MsG0880043034.01	0.802825	4.668807e-49	2.309863e-46
MsG0380015548.01	MsG0880043034.01	0.814208	1.731676e-51	1.154673e-48
MsG0380015677.01	MsG0880043034.01	0.815669	8.213547e-52	5.698936e-49
MsG0380015720.01	MsG0880043034.01	0.803504	3.378101e-49	1.700505e-46
MsG0380015808.01	MsG0880043034.01	0.823033	1.721741e-53	1.465729e-50
MsG0380016140.01	MsG0880043034.01	0.824602	7.383874e-54	6.572208e-51
MsG0380016199.01	MsG0880043034.01	0.818499	1.899153e-52	1.424003e-49
MsG0380016247.01	MsG0880043034.01	0.809516	1.820581e-50	1.071138e-47
MsG0380016517.01	MsG0880043034.01	0.812657	3.797868e-51	2.428657e-48
MsG0380016703.01	MsG0880043034.01	0.813959	1.965905e-51	1.302043e-48
MsG0380016893.01	MsG0880043034.01	0.810465	1.137339e-50	6.860598e-48
MsG0380016910.01	MsG0880043034.01	0.804381	2.220464e-49	1.143202e-46
MsG0380016994.01	MsG0880043034.01	0.873311	1.622871e-67	7.010156e-64
MsG0380017159.01	MsG0880043034.01	0.814943	1.191068e-51	8.101225e-49
MsG0380017372.01	MsG0880043034.01	0.827760	1.309070e-54	1.275613e-51
MsG0380017375.01	MsG0880043034.01	0.809362	1.964446e-50	1.151103e-47
MsG0480018163.01	MsG0880043034.01	0.823041	1.714671e-53	1.460054e-50
MsG0480018230.01	MsG0880043034.01	0.804986	1.659687e-49	8.679386e-47
MsG0480018313.01	MsG0880043034.01	0.824608	7.359763e-54	6.552018e-51
MsG0480018397.01	MsG0880043034.01	0.808893	2.476250e-50	1.432769e-47
MsG0580026089.01	MsG0880043034.01	0.806203	9.219073e-50	4.974233e-47
MsG0580026309.01	MsG0880043034.01	0.807278	5.464035e-50	3.030858e-47
MsG0580026593.01	MsG0880043034.01	0.827314	1.675111e-54	1.611444e-51
MsG0580026610.01	MsG0880043034.01	0.817352	3.448215e-52	2.505190e-49
MsG0580027650.01	MsG0880043034.01	0.842360	2.711985e-58	4.102158e-55
MsG0580027999.01	MsG0880043034.01	0.807218	5.626831e-50	3.116234e-47
MsG0580028176.01	MsG0880043034.01	0.821514	3.876986e-53	3.160729e-50
MsG0580028378.01	MsG0880043034.01	0.802672	5.020246e-49	2.473816e-46
MsG0580029441.01	MsG0880043034.01	0.800915	1.152023e-48	5.429669e-46
MsG0580029640.01	MsG0880043034.01	0.853524	2.258198e-61	4.893410e-58
MsG0580029729.01	MsG0880043034.01	0.822994	1.758863e-53	1.495611e-50
MsG0680030447.01	MsG0880043034.01	0.812138	4.929829e-51	3.109210e-48
MsG0680030615.01	MsG0880043034.01	0.803105	4.085477e-49	2.035457e-46
MsG0280006712.01	MsG0880043034.01	0.822630	2.136901e-53	1.798600e-50
MsG0280007452.01	MsG0880043034.01	0.853856	1.812394e-61	3.971108e-58
MsG0280007506.01	MsG0880043034.01	0.806105	9.666799e-50	5.202541e-47
MsG0280007609.01	MsG0880043034.01	0.802043	6.763568e-49	3.279949e-46
MsG0280007764.01	MsG0880043034.01	0.803254	3.806514e-49	1.903822e-46
MsG0280007955.01	MsG0880043034.01	0.804782	1.831268e-49	9.526688e-47
MsG0280008361.01	MsG0880043034.01	0.813387	2.626337e-51	1.712804e-48
MsG0280008362.01	MsG0880043034.01	0.809867	1.530512e-50	9.088698e-48
MsG0280008615.01	MsG0880043034.01	0.807219	5.625474e-50	3.115551e-47
MsG0280009266.01	MsG0880043034.01	0.810890	9.204813e-51	5.616172e-48
MsG0280009514.01	MsG0880043034.01	0.821270	4.413992e-53	3.574116e-50
MsG0280009794.01	MsG0880043034.01	0.848556	5.686332e-60	1.047507e-56
MsG0280010491.01	MsG0880043034.01	0.825450	4.657997e-54	4.246794e-51
MsG0680035692.01	MsG0880043034.01	0.840018	1.119080e-57	1.573669e-54
MsG0780036147.01	MsG0880043034.01	0.800238	1.583239e-48	7.334505e-46
MsG0780036297.01	MsG0880043034.01	0.819720	1.001229e-52	7.765876e-50
MsG0780036477.01	MsG0880043034.01	0.854937	8.826091e-62	2.003867e-58
MsG0780036752.01	MsG0880043034.01	0.839865	1.226819e-57	1.716592e-54
MsG0780036773.01	MsG0880043034.01	0.802411	5.681692e-49	2.781357e-46
MsG0780036815.01	MsG0880043034.01	0.835223	1.901097e-56	2.310018e-53
MsG0780037054.01	MsG0880043034.01	0.826191	3.106869e-54	2.893296e-51
MsG0780037240.01	MsG0880043034.01	0.827635	1.403413e-54	1.362501e-51
MsG0780037604.01	MsG0880043034.01	0.809389	1.938590e-50	1.136754e-47
MsG0780038401.01	MsG0880043034.01	0.846036	2.794838e-59	4.748606e-56
MsG0780038424.01	MsG0880043034.01	0.848791	4.892107e-60	9.081693e-57
MsG0780039137.01	MsG0880043034.01	0.817800	2.732641e-52	2.009948e-49
MsG0780039243.01	MsG0880043034.01	0.807907	4.018905e-50	2.265831e-47
MsG0780039527.01	MsG0880043034.01	0.808195	3.488704e-50	1.982158e-47
MsG0780039655.01	MsG0880043034.01	0.813252	2.811650e-51	1.826757e-48
MsG0780039866.01	MsG0880043034.01	0.815683	8.151891e-52	5.658415e-49
MsG0780040023.01	MsG0880043034.01	0.820622	6.222541e-53	4.948383e-50
MsG0780040057.01	MsG0880043034.01	0.849139	3.915744e-60	7.353350e-57

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880043034.01.T01	MTR_8g027840	51.795	195	22	6	1	193	1	125	4.24e-44	143

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880043034.01.T01	AT1G01370	39.850	133	34	6	64	193	84	173	1.34e-15	71.6
MsG0880043034.01.T01	AT1G01370	39.850	133	34	6	64	193	84	173	1.34e-15	71.6
MsG0880043034.01.T01	AT1G01370	39.850	133	34	6	64	193	84	173	1.34e-15	71.6
MsG0880043034.01.T01	AT1G01370	39.850	133	34	6	64	193	84	173	1.34e-15	71.6

Find 41 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTGGTTGTCTCAGTGAAAA+AGG	0.239991	8:+17950741	MsG0880043034.01.T01:intron
GAGTTGACCCGTAGGCTTAC+AGG	0.290145	8:+17950769	MsG0880043034.01.T01:CDS
TACCTCTTGAAGTGCTAATA+AGG	0.302455	8:-17947836	None:intergenic
CATTCATTCATTCGGAAGAT+TGG	0.314294	8:+17950204	MsG0880043034.01.T01:CDS
GATTACAAACCAACTATCTA+TGG	0.360641	8:+17947789	MsG0880043034.01.T01:CDS
AAATTAAAACCTAAAATGTT+TGG	0.364407	8:-17950253	None:intergenic
GTAGGCAGCTGAGGAGCATC+TGG	0.392268	8:+17949687	MsG0880043034.01.T01:intron
TAGATTCTTACGAATTCAAC+AGG	0.397266	8:+17947946	MsG0880043034.01.T01:intron
CAATCTTCCGAATGAATGAA+TGG	0.439004	8:-17950203	None:intergenic
CGAGATTCGTAAATTTCAAA+AGG	0.441799	8:+17945947	MsG0880043034.01.T01:CDS
GGATCTCCCATTCATTCATT+CGG	0.449674	8:+17950196	MsG0880043034.01.T01:CDS
GGTGACCGTTCAATCAAGAT+TGG	0.456816	8:+17950225	MsG0880043034.01.T01:CDS
CTCGCGAAGCGCAACTGTCC+TGG	0.457724	8:-17945928	None:intergenic
GTGATACCTCCATAGATAGT+TGG	0.459811	8:-17947798	None:intergenic
ACGAATTCAACAGGCATCCT+TGG	0.476660	8:+17947955	MsG0880043034.01.T01:CDS
GCATCTGGTTCGTATGTTTG+AGG	0.487530	8:+17949702	MsG0880043034.01.T01:CDS
CATCTGGTTCGTATGTTTGA+GGG	0.491672	8:+17949703	MsG0880043034.01.T01:CDS
GGTATCACGCTGGACGGCTG+AGG	0.513698	8:+17947813	MsG0880043034.01.T01:CDS
CTACGACGAGTGCGTTTACC+AGG	0.516556	8:-17945771	None:intergenic
TCTGAGGAAAAGAAGAAAGA+AGG	0.517941	8:+17945899	MsG0880043034.01.T01:CDS
GTCAAGCACATTCCACGTCC+TGG	0.519981	8:+17945753	MsG0880043034.01.T01:CDS
AAACTTACGCATCTAACAAA+CGG	0.525872	8:-17945996	None:intergenic
AATCTTCCGAATGAATGAAT+GGG	0.529813	8:-17950202	None:intergenic
CGTCGTAGCAGTAGTAGTAA+TGG	0.540770	8:+17945786	MsG0880043034.01.T01:CDS
GACCCGTAGGCTTACAGGAT+AGG	0.552955	8:+17950774	MsG0880043034.01.T01:CDS
CATCCTATCCTGTAAGCCTA+CGG	0.556883	8:-17950777	None:intergenic
GAAGAAAGAAGGAACAGACC+AGG	0.563517	8:+17945910	MsG0880043034.01.T01:CDS
GAAAATCTTGTAGGCAGCTG+AGG	0.568090	8:+17949678	MsG0880043034.01.T01:intron
ATCCTATCCTGTAAGCCTAC+GGG	0.569817	8:-17950776	None:intergenic
ACCGTCCAATCTTGATTGAA+CGG	0.572869	8:-17950230	None:intergenic
CGAGTGCGTTTACCAGGACG+TGG	0.589441	8:-17945765	None:intergenic
TATGGAGGTATCACGCTGGA+CGG	0.590985	8:+17947807	MsG0880043034.01.T01:CDS
CATCTAACAAACGGAGCACA+AGG	0.593820	8:-17945987	None:intergenic
AATGTGCTTGACTCTTGCCA+TGG	0.606549	8:-17945742	None:intergenic
ATGTGAAATTGTGAAAACGA+GGG	0.607232	8:-17945828	None:intergenic
ACCGTTCAATCAAGATTGGA+CGG	0.610356	8:+17950229	MsG0880043034.01.T01:CDS
AATGTGAAATTGTGAAAACG+AGG	0.631723	8:-17945829	None:intergenic
GGCCTTATTAGCACTTCAAG+AGG	0.637546	8:+17947834	MsG0880043034.01.T01:CDS
AGGATCTTGAGTTGACCCGT+AGG	0.666475	8:+17950761	MsG0880043034.01.T01:CDS
TACAAACCAACTATCTATGG+AGG	0.667342	8:+17947792	MsG0880043034.01.T01:CDS
TATCTATGGAGGTATCACGC+TGG	0.705952	8:+17947803	MsG0880043034.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAATAAATCAACTTACTA+AGG	-	Chr8:17949764-17949783	None:intergenic	15.0%
!!	AAAATAAATCAACTTACTAA+GGG	-	Chr8:17949763-17949782	None:intergenic	15.0%
!!	AAATTAAAACCTAAAATGTT+TGG	-	Chr8:17950256-17950275	None:intergenic	15.0%
!!	GGTAATAAACTAATAATTTA+AGG	+	Chr8:17946442-17946461	MsG0880043034.01.T01:intron	15.0%
!!	TAAGAATCTATGAAATAAAA+CGG	-	Chr8:17947936-17947955	None:intergenic	15.0%
!!	TACTGAAAATAATAACTAAA+GGG	+	Chr8:17949221-17949240	MsG0880043034.01.T01:intron	15.0%
!!	TTACTGAAAATAATAACTAA+AGG	+	Chr8:17949220-17949239	MsG0880043034.01.T01:intron	15.0%
!!!	ACATTTTTATTAACATTAAC+AGG	+	Chr8:17950422-17950441	MsG0880043034.01.T01:intron	15.0%
!!!	CTTCATCTTAATTTTATATT+TGG	+	Chr8:17947270-17947289	MsG0880043034.01.T01:intron	15.0%
!!!	TTTTTAAATTATGAAGAATC+CGG	+	Chr8:17947910-17947929	MsG0880043034.01.T01:intron	15.0%
!!	AAACTCTCTTAAATTATTAC+TGG	-	Chr8:17946148-17946167	None:intergenic	20.0%
!!	AAAGAAAATTAACGAAAGAA+GGG	-	Chr8:17949652-17949671	None:intergenic	20.0%
!!	AAAGTTCTTATAATTTCATG+TGG	-	Chr8:17947324-17947343	None:intergenic	20.0%
!!	AAATGTGATACCAAATTAAA+AGG	-	Chr8:17950074-17950093	None:intergenic	20.0%
!!	AATTTCAACTTAATACAAAG+AGG	-	Chr8:17947453-17947472	None:intergenic	20.0%
!!	ACATGAAAATACTATTCATA+AGG	-	Chr8:17950694-17950713	None:intergenic	20.0%
!!	ATAATAGAACCATATGAAAA+AGG	-	Chr8:17947867-17947886	None:intergenic	20.0%
!!	ATCTGTTAGACTTTATATTA+TGG	-	Chr8:17949268-17949287	None:intergenic	20.0%
!!	ATCTTAATAGCTATTAAAAC+GGG	+	Chr8:17949570-17949589	MsG0880043034.01.T01:intron	20.0%
!!	CATCTTAATAGCTATTAAAA+CGG	+	Chr8:17949569-17949588	MsG0880043034.01.T01:intron	20.0%
!!	CATGAAAATACTATTCATAA+GGG	-	Chr8:17950693-17950712	None:intergenic	20.0%
!!	CATTCATCATCAAAATAAAA+AGG	-	Chr8:17949856-17949875	None:intergenic	20.0%
!!	GAAAAATAAATCAATACCAA+CGG	-	Chr8:17948525-17948544	None:intergenic	20.0%
!!	GAAAATTGAAAAAACAGTTT+AGG	-	Chr8:17949356-17949375	None:intergenic	20.0%
!!	TATCTATAATTTGACTAAAC+TGG	+	Chr8:17949300-17949319	MsG0880043034.01.T01:intron	20.0%
!!	TCAAATAACAGATGTTAATA+AGG	-	Chr8:17950718-17950737	None:intergenic	20.0%
!!	TTTATCTAGAGGAAAATAAA+TGG	+	Chr8:17950577-17950596	MsG0880043034.01.T01:intron	20.0%
!!	TTTCAGTAATAAATAGAGAA+GGG	-	Chr8:17949209-17949228	None:intergenic	20.0%
!!!	AAATTAAAGCAAAAAGCATA+GGG	-	Chr8:17947752-17947771	None:intergenic	20.0%
!!!	ACATCTGTTATTTGATATTT+TGG	+	Chr8:17950723-17950742	MsG0880043034.01.T01:intron	20.0%
!!!	AGTAAAATTAATTTTGCATC+TGG	-	Chr8:17946634-17946653	None:intergenic	20.0%
!!!	ATTTATTTTTCTCTTTCCTA+TGG	+	Chr8:17948534-17948553	MsG0880043034.01.T01:intron	20.0%
!!!	ATTTTCCAAGTAATAACTTA+TGG	-	Chr8:17947590-17947609	None:intergenic	20.0%
!!!	CTAGTATATTTTTTAGTGTA+CGG	+	Chr8:17946170-17946189	MsG0880043034.01.T01:intron	20.0%
!!!	CTTTAAGAGATATCAATAAT+TGG	+	Chr8:17946344-17946363	MsG0880043034.01.T01:intron	20.0%
!!!	TGACATTTTTTTTATACAGA+TGG	+	Chr8:17946848-17946867	MsG0880043034.01.T01:intron	20.0%
!!!	TTTTCAGTAATAAATAGAGA+AGG	-	Chr8:17949210-17949229	None:intergenic	20.0%
!!!	TTTTCCAAGTAATAACTTAT+GGG	-	Chr8:17947589-17947608	None:intergenic	20.0%
!	AAATTAAAAGGATGGGATAA+TGG	-	Chr8:17950062-17950081	None:intergenic	25.0%
!	AAATTAATTTCAACTAACGC+GGG	-	Chr8:17947250-17947269	None:intergenic	25.0%
!	AAATTGTCAACACAAGTTTA+TGG	-	Chr8:17950520-17950539	None:intergenic	25.0%
!	AACGGATATTGAAAATGATA+AGG	-	Chr8:17948507-17948526	None:intergenic	25.0%
!	AACTATAAGTGTATAAGTGA+AGG	+	Chr8:17949481-17949500	MsG0880043034.01.T01:intron	25.0%
!	AATATGTATACTAGAGAAAG+AGG	+	Chr8:17949962-17949981	MsG0880043034.01.T01:intron	25.0%
!	ACTATAAGTGTATAAGTGAA+GGG	+	Chr8:17949482-17949501	MsG0880043034.01.T01:intron	25.0%
!	ACTTGGAAAATAATTGAAAC+TGG	+	Chr8:17947599-17947618	MsG0880043034.01.T01:intron	25.0%
!	ATCGATGAAAATAAAAACAG+GGG	-	Chr8:17949795-17949814	None:intergenic	25.0%
!	CAAAGAAAATTAACGAAAGA+AGG	-	Chr8:17949653-17949672	None:intergenic	25.0%
!	CAAAGATTAGAGAAATGATA+TGG	+	Chr8:17948825-17948844	MsG0880043034.01.T01:intron	25.0%
!	CTTATGAATTGTGTATCTAT+TGG	+	Chr8:17949424-17949443	MsG0880043034.01.T01:intron	25.0%
!	GAAATTAATTTCAACTAACG+CGG	-	Chr8:17947251-17947270	None:intergenic	25.0%
!	GATCGATGAAAATAAAAACA+GGG	-	Chr8:17949796-17949815	None:intergenic	25.0%
!	GTTAGTTACTTATGTTAGTT+TGG	+	Chr8:17947356-17947375	MsG0880043034.01.T01:intron	25.0%
!	TAATAAATAGAGAAGGGAAA+GGG	-	Chr8:17949203-17949222	None:intergenic	25.0%
!	TCTAGAAGATAATTTACACT+TGG	+	Chr8:17947651-17947670	MsG0880043034.01.T01:intron	25.0%
!	TCTTAATAGCTATTAAAACG+GGG	+	Chr8:17949571-17949590	MsG0880043034.01.T01:intron	25.0%
!	TGATACCAAATTAAAAGGAT+GGG	-	Chr8:17950069-17950088	None:intergenic	25.0%
!	TGATCGATGAAAATAAAAAC+AGG	-	Chr8:17949797-17949816	None:intergenic	25.0%
!!	ATCAGTTTTTCATCTTTATC+AGG	-	Chr8:17948114-17948133	None:intergenic	25.0%
!!	ATGTCATTTCAACAAATCAT+AGG	-	Chr8:17947678-17947697	None:intergenic	25.0%
!!	CAAATTAAAGCAAAAAGCAT+AGG	-	Chr8:17947753-17947772	None:intergenic	25.0%
!!	TCAAATTTGTTCTATATCTC+TGG	+	Chr8:17946671-17946690	MsG0880043034.01.T01:intron	25.0%
!!	TGTCATTTCAACAAATCATA+GGG	-	Chr8:17947677-17947696	None:intergenic	25.0%
!!	TTATCATTTTCAATATCCGT+TGG	+	Chr8:17948506-17948525	MsG0880043034.01.T01:intron	25.0%
!!	TTTGTAGTTGATATGAACTT+AGG	+	Chr8:17946884-17946903	MsG0880043034.01.T01:intron	25.0%
!!!	ACAGAGTTTTATTTATCTAG+AGG	+	Chr8:17950566-17950585	MsG0880043034.01.T01:intron	25.0%
!!!	ATTATCCCATCCTTTTAATT+TGG	+	Chr8:17950061-17950080	MsG0880043034.01.T01:intron	25.0%
!!!	TAGAAACTGACTTTTATTGA+TGG	+	Chr8:17949006-17949025	MsG0880043034.01.T01:intron	25.0%
!!!	TATATCTCTGGAATCAATTT+TGG	+	Chr8:17946683-17946702	MsG0880043034.01.T01:intron	25.0%
!!!	TTAAGATAGCTTGCTATATA+TGG	+	Chr8:17948628-17948647	MsG0880043034.01.T01:intron	25.0%
!!!	TTTGTTGTTGAAAATCTTGT+AGG	+	Chr8:17949669-17949688	MsG0880043034.01.T01:intron	25.0%
!!!	TTTTGAGATTACATTTCGTA+TGG	+	Chr8:17949619-17949638	MsG0880043034.01.T01:intron	25.0%
	AAACTTACGCATCTAACAAA+CGG	-	Chr8:17945999-17946018	None:intergenic	30.0%
	AACTTACCTTGTATGTGAAA+AGG	+	Chr8:17948328-17948347	MsG0880043034.01.T01:intron	30.0%
	AACTTAGCTGGAAAAGTTAT+GGG	-	Chr8:17948076-17948095	None:intergenic	30.0%
	AAGATTCCCATTTGTATACA+TGG	-	Chr8:17948570-17948589	None:intergenic	30.0%
	AAGGAAAATGTTTGAACAGA+TGG	-	Chr8:17948430-17948449	None:intergenic	30.0%
	AATAAATAGAGAAGGGAAAG+GGG	-	Chr8:17949202-17949221	None:intergenic	30.0%
	AATAGAGCCATGTATACAAA+TGG	+	Chr8:17948560-17948579	MsG0880043034.01.T01:intron	30.0%
	AATCTATGAAATAAAACGGC+CGG	-	Chr8:17947932-17947951	None:intergenic	30.0%
	AATCTTCCGAATGAATGAAT+GGG	-	Chr8:17950205-17950224	None:intergenic	30.0%
	AATGTGAAATTGTGAAAACG+AGG	-	Chr8:17945832-17945851	None:intergenic	30.0%
	ACAATGAGGAAAAGAAACAA+AGG	-	Chr8:17948449-17948468	None:intergenic	30.0%
	ACGAAATGTAATCTCAAAAC+AGG	-	Chr8:17949618-17949637	None:intergenic	30.0%
	AGAGATAGAATATTGTCACA+AGG	+	Chr8:17949096-17949115	MsG0880043034.01.T01:intron	30.0%
	AGCAGAGACAAAATTATAAC+TGG	-	Chr8:17950649-17950668	None:intergenic	30.0%
	ATAGAGCCATGTATACAAAT+GGG	+	Chr8:17948561-17948580	MsG0880043034.01.T01:intron	30.0%
	ATCCAGATGATCTTAAACAT+AGG	+	Chr8:17948893-17948912	MsG0880043034.01.T01:intron	30.0%
	ATCTTAACTATTCATGCAAC+TGG	-	Chr8:17948615-17948634	None:intergenic	30.0%
	ATGAATAGAGATGGCTAATA+GGG	-	Chr8:17950357-17950376	None:intergenic	30.0%
	ATGTGAAATTGTGAAAACGA+GGG	-	Chr8:17945831-17945850	None:intergenic	30.0%
	CGAGATTCGTAAATTTCAAA+AGG	+	Chr8:17945947-17945966	MsG0880043034.01.T01:CDS	30.0%
	CTTAATAGCTATTAAAACGG+GGG	+	Chr8:17949572-17949591	MsG0880043034.01.T01:intron	30.0%
	GAAATGCAGTTTACAGAATT+CGG	+	Chr8:17950156-17950175	MsG0880043034.01.T01:intron	30.0%
	GATTACAAACCAACTATCTA+TGG	+	Chr8:17947789-17947808	MsG0880043034.01.T01:CDS	30.0%
	GCGTTTATTATCGAAATTAC+AGG	+	Chr8:17946590-17946609	MsG0880043034.01.T01:intron	30.0%
	GGACATGAAAGTAAATTGTA+TGG	-	Chr8:17948055-17948074	None:intergenic	30.0%
	GTAATAAATAGAGAAGGGAA+AGG	-	Chr8:17949204-17949223	None:intergenic	30.0%
	GTGATACCAAATTAAAAGGA+TGG	-	Chr8:17950070-17950089	None:intergenic	30.0%
	TAAAACTCTGTTAGAGTCTT+CGG	-	Chr8:17950557-17950576	None:intergenic	30.0%
	TAAACCAATGAAAGAAGAAG+TGG	+	Chr8:17948001-17948020	MsG0880043034.01.T01:intron	30.0%
	TAACGAAGTTTGATATGTGT+AGG	-	Chr8:17946759-17946778	None:intergenic	30.0%
	TAGATTCTTACGAATTCAAC+AGG	+	Chr8:17947946-17947965	MsG0880043034.01.T01:intron	30.0%
	TATGAATAGAGATGGCTAAT+AGG	-	Chr8:17950358-17950377	None:intergenic	30.0%
	TCACATACAAGGTAAGTTAA+GGG	-	Chr8:17948326-17948345	None:intergenic	30.0%
	TCCATGATCGTTATGTAAAA+AGG	+	Chr8:17947381-17947400	MsG0880043034.01.T01:intron	30.0%
	TCTTTGTAATGTCTGTAATC+AGG	-	Chr8:17949053-17949072	None:intergenic	30.0%
	TTAATAGCTATTAAAACGGG+GGG	+	Chr8:17949573-17949592	MsG0880043034.01.T01:intron	30.0%
	TTCACATACAAGGTAAGTTA+AGG	-	Chr8:17948327-17948346	None:intergenic	30.0%
	TTTAATGTGTGCTGTCAATT+AGG	+	Chr8:17946066-17946085	MsG0880043034.01.T01:intron	30.0%
!	ATTTCTTCGATTTGAAGTGT+GGG	+	Chr8:17946798-17946817	MsG0880043034.01.T01:intron	30.0%
!	GTATACATATTACTGACTGT+AGG	-	Chr8:17949953-17949972	None:intergenic	30.0%
!	TCCTTTTTACATAACGATCA+TGG	-	Chr8:17947385-17947404	None:intergenic	30.0%
!	TGATGAATGAAGCTTTATCT+TGG	+	Chr8:17949867-17949886	MsG0880043034.01.T01:intron	30.0%
!	TGTATGTTTGGTTTCACTAT+CGG	-	Chr8:17946714-17946733	None:intergenic	30.0%
!!	AGGAAAAGGAAACTTGTTTT+TGG	+	Chr8:17946907-17946926	MsG0880043034.01.T01:intron	30.0%
!!	ATATATGGTGTCTTTTGACT+CGG	+	Chr8:17948643-17948662	MsG0880043034.01.T01:intron	30.0%
!!	ATTAGGTTTTAGTAGTACCA+CGG	+	Chr8:17946083-17946102	MsG0880043034.01.T01:intron	30.0%
!!	ATTTTTCAACACGTACTTGT+TGG	+	Chr8:17947080-17947099	MsG0880043034.01.T01:intron	30.0%
!!	CAATCAAGTTTTATCCAAGA+AGG	+	Chr8:17948398-17948417	MsG0880043034.01.T01:intron	30.0%
!!	GGTATGTTACCTTTTTCATA+TGG	+	Chr8:17947855-17947874	MsG0880043034.01.T01:intron	30.0%
!!	TGCAGTGACAAAATTGATTT+TGG	+	Chr8:17946490-17946509	MsG0880043034.01.T01:intron	30.0%
!!	TTAGCGTATTGCTTTTAGAT+TGG	+	Chr8:17948946-17948965	MsG0880043034.01.T01:intron	30.0%
!!	TTGCTTTAATTTGTGTCTGT+AGG	+	Chr8:17947760-17947779	MsG0880043034.01.T01:intron	30.0%
!!!	AAAACGAGGGTTTTAGAAAT+TGG	-	Chr8:17945818-17945837	None:intergenic	30.0%
!!!	CATTTTTTTGTGTGACTGTA+TGG	+	Chr8:17946978-17946997	MsG0880043034.01.T01:intron	30.0%
!!!	TTTGTGTTGTTTTTTCCTGT+GGG	+	Chr8:17950475-17950494	MsG0880043034.01.T01:intron	30.0%
!!!	TTTTGTGTTGTTTTTTCCTG+TGG	+	Chr8:17950474-17950493	MsG0880043034.01.T01:intron	30.0%
	AATGACATCCAGTCAGTATT+TGG	+	Chr8:17947690-17947709	MsG0880043034.01.T01:intron	35.0%
	AATTGTGATCTTACGACCTT+TGG	+	Chr8:17948868-17948887	MsG0880043034.01.T01:intron	35.0%
	AGCTCCCATAAGTTATTACT+TGG	+	Chr8:17947582-17947601	MsG0880043034.01.T01:intron	35.0%
	AGCTGTCAAATTTCTTGGAT+AGG	-	Chr8:17949127-17949146	None:intergenic	35.0%
	ATAGCTCATGATGTAGTATG+TGG	+	Chr8:17948719-17948738	MsG0880043034.01.T01:intron	35.0%
	ATATTACAACGTGCATTGCA+CGG	-	Chr8:17948295-17948314	None:intergenic	35.0%
	ATGTCAATTACTATCGTGTC+TGG	-	Chr8:17946118-17946137	None:intergenic	35.0%
	ATTGGATGTTTGTTCTCACT+TGG	+	Chr8:17947726-17947745	MsG0880043034.01.T01:intron	35.0%
	CAAACTTCGTTACATTTGAG+AGG	+	Chr8:17946767-17946786	MsG0880043034.01.T01:intron	35.0%
	CAACTTAGCTGGAAAAGTTA+TGG	-	Chr8:17948077-17948096	None:intergenic	35.0%
	CAATCTTCCGAATGAATGAA+TGG	-	Chr8:17950206-17950225	None:intergenic	35.0%
	CAGATGATCTTAAACATAGG+AGG	+	Chr8:17948896-17948915	MsG0880043034.01.T01:intron	35.0%
	CATGCTCTATATGGAAGTAA+TGG	+	Chr8:17947026-17947045	MsG0880043034.01.T01:intron	35.0%
	CATTCATTCATTCGGAAGAT+TGG	+	Chr8:17950204-17950223	MsG0880043034.01.T01:CDS	35.0%
	CTACTGAACAATAGCTAGAT+TGG	+	Chr8:17948236-17948255	MsG0880043034.01.T01:intron	35.0%
	GAACACATGTAGTGTATGTT+TGG	-	Chr8:17946726-17946745	None:intergenic	35.0%
	GATATGAACTTAGGAGGAAA+AGG	+	Chr8:17946893-17946912	MsG0880043034.01.T01:intron	35.0%
	GATTATTGAAGCTTCTCAAC+AGG	-	Chr8:17947633-17947652	None:intergenic	35.0%
	GGATAGTTATTGAGTGGTTA+TGG	-	Chr8:17949161-17949180	None:intergenic	35.0%
	GGCTGAAAGTGATTTATGTT+TGG	+	Chr8:17946511-17946530	MsG0880043034.01.T01:intron	35.0%
	GTTAAAGGATACTCGTGTTT+GGG	+	Chr8:17948674-17948693	MsG0880043034.01.T01:intron	35.0%
	GTTATGGGATAGTTATTGAG+TGG	-	Chr8:17949167-17949186	None:intergenic	35.0%
	TAATGTACCCTCTCTTTACA+CGG	-	Chr8:17950122-17950141	None:intergenic	35.0%
	TACAAACCAACTATCTATGG+AGG	+	Chr8:17947792-17947811	MsG0880043034.01.T01:CDS	35.0%
	TACTCCACTTCTTCTTTCAT+TGG	-	Chr8:17948008-17948027	None:intergenic	35.0%
	TATCCAAGAAATTTGACAGC+TGG	+	Chr8:17949126-17949145	MsG0880043034.01.T01:intron	35.0%
	TCTGAGGAAAAGAAGAAAGA+AGG	+	Chr8:17945899-17945918	MsG0880043034.01.T01:CDS	35.0%
	TGTTAAAGGATACTCGTGTT+TGG	+	Chr8:17948673-17948692	MsG0880043034.01.T01:intron	35.0%
	TTAAAGGATACTCGTGTTTG+GGG	+	Chr8:17948675-17948694	MsG0880043034.01.T01:intron	35.0%
	TTGTCAAATAGCAGCTATAG+TGG	+	Chr8:17947164-17947183	MsG0880043034.01.T01:intron	35.0%
	TTTGATGAGCATGCTCTATA+TGG	+	Chr8:17947017-17947036	MsG0880043034.01.T01:intron	35.0%
	TTTGGTTGTCTCAGTGAAAA+AGG	+	Chr8:17950741-17950760	MsG0880043034.01.T01:intron	35.0%
!	CATTTCTTCGATTTGAAGTG+TGG	+	Chr8:17946797-17946816	MsG0880043034.01.T01:intron	35.0%
!	CTCCTATGTTTAAGATCATC+TGG	-	Chr8:17948898-17948917	None:intergenic	35.0%
!	GTAGTTGATATGAACTTAGG+AGG	+	Chr8:17946887-17946906	MsG0880043034.01.T01:intron	35.0%
!	TACCTCTTGAAGTGCTAATA+AGG	-	Chr8:17947839-17947858	None:intergenic	35.0%
!	TGACTGTATGGCTTTTTATG+TGG	+	Chr8:17946990-17947009	MsG0880043034.01.T01:intron	35.0%
!	TTTATCAGGTAAGCCTCTTT+TGG	-	Chr8:17948100-17948119	None:intergenic	35.0%
!!	ACATGGCTCTATTTTTCCAT+AGG	-	Chr8:17948553-17948572	None:intergenic	35.0%
!!	CGTATTGCTTTTAGATTGGT+GGG	+	Chr8:17948950-17948969	MsG0880043034.01.T01:intron	35.0%
!!	GCTTTTCAATCAAAAGTGCA+TGG	-	Chr8:17947565-17947584	None:intergenic	35.0%
!!	TGATGTAGTATGTGGATTAG+TGG	+	Chr8:17948727-17948746	MsG0880043034.01.T01:intron	35.0%
!!	TTTTTCAGCAAATGAGTCTG+AGG	+	Chr8:17945883-17945902	MsG0880043034.01.T01:CDS	35.0%
!!!	CACTTCTGTTTTTGGTTTCA+GGG	+	Chr8:17947978-17947997	MsG0880043034.01.T01:CDS	35.0%
	AACATAGGAGGAATCCAATC+TGG	+	Chr8:17948908-17948927	MsG0880043034.01.T01:intron	40.0%
	AACTGAAGTAGCGTAGTTGT+TGG	+	Chr8:17949987-17950006	MsG0880043034.01.T01:intron	40.0%
	AAGAAGTGGAGTAAGTTGTG+GGG	+	Chr8:17948015-17948034	MsG0880043034.01.T01:intron	40.0%
	AAGATCATCTGGATTGCCAA+AGG	-	Chr8:17948887-17948906	None:intergenic	40.0%
	AATAGCTCAGTAGTTCACAC+TGG	-	Chr8:17946385-17946404	None:intergenic	40.0%
	AATATGAAACTAGCTCCCAC+AGG	-	Chr8:17950493-17950512	None:intergenic	40.0%
	ACAGATGGAGAATTCCTTCT+TGG	-	Chr8:17948415-17948434	None:intergenic	40.0%
	ACCGTCCAATCTTGATTGAA+CGG	-	Chr8:17950233-17950252	None:intergenic	40.0%
	ACCGTTCAATCAAGATTGGA+CGG	+	Chr8:17950229-17950248	MsG0880043034.01.T01:CDS	40.0%
	ACTGAAGTAGCGTAGTTGTT+GGG	+	Chr8:17949988-17950007	MsG0880043034.01.T01:intron	40.0%
	AGAAGAAGTGGAGTAAGTTG+TGG	+	Chr8:17948013-17948032	MsG0880043034.01.T01:intron	40.0%
	AGACGGTTTAGATTCAAGCT+CGG	-	Chr8:17950298-17950317	None:intergenic	40.0%
	AGAGAAATGATATGGCTGAC+AGG	+	Chr8:17948833-17948852	MsG0880043034.01.T01:intron	40.0%
	CTCAGACTGTAACTGTAAGA+TGG	-	Chr8:17948354-17948373	None:intergenic	40.0%
	GAAGAAGCTTTCAGACAATG+AGG	-	Chr8:17948463-17948482	None:intergenic	40.0%
	GAAGAAGTGGAGTAAGTTGT+GGG	+	Chr8:17948014-17948033	MsG0880043034.01.T01:intron	40.0%
	GAAGCTTCTCAACAGGTATA+AGG	-	Chr8:17947626-17947645	None:intergenic	40.0%
	GCAACTCGTATGAATAGAGA+TGG	-	Chr8:17950366-17950385	None:intergenic	40.0%
	GCTCACTTGTACAAGGTTAA+CGG	+	Chr8:17948774-17948793	MsG0880043034.01.T01:intron	40.0%
	GGAAAAGTTACGTCACTCTT+AGG	+	Chr8:17950443-17950462	MsG0880043034.01.T01:intron	40.0%
	GGATCTCCCATTCATTCATT+CGG	+	Chr8:17950196-17950215	MsG0880043034.01.T01:CDS	40.0%
	GGTAGCTGAGATGATATTTC+AGG	+	Chr8:17948795-17948814	MsG0880043034.01.T01:intron	40.0%
	GTGATACCTCCATAGATAGT+TGG	-	Chr8:17947801-17947820	None:intergenic	40.0%
	TCTCTATTCATACGAGTTGC+AGG	+	Chr8:17950366-17950385	MsG0880043034.01.T01:intron	40.0%
	TTACACGGTAAAGGCAATAG+TGG	-	Chr8:17950107-17950126	None:intergenic	40.0%
	TTCATTGTTCATCAAAGCGC+TGG	+	Chr8:17950018-17950037	MsG0880043034.01.T01:intron	40.0%
!	AGATGGCCTTTTCACATACA+AGG	-	Chr8:17948337-17948356	None:intergenic	40.0%
!	AGCTAGATTGGTTAACACTC+TGG	+	Chr8:17948248-17948267	MsG0880043034.01.T01:intron	40.0%
!	ATCCTTGGCACTTCTGTTTT+TGG	+	Chr8:17947970-17947989	MsG0880043034.01.T01:CDS	40.0%
!	CATCTGGTTCGTATGTTTGA+GGG	+	Chr8:17949703-17949722	MsG0880043034.01.T01:CDS	40.0%
!	GGATTAGCAAGTGCTTTAGT+AGG	+	Chr8:17948971-17948990	MsG0880043034.01.T01:intron	40.0%
!	GGTTAGTTGATGTTCAGTCA+TGG	+	Chr8:17948269-17948288	MsG0880043034.01.T01:intron	40.0%
!	TTGGACGGTCCAAACATTTT+AGG	+	Chr8:17950244-17950263	MsG0880043034.01.T01:CDS	40.0%
!!	AACCAAAAACAGAAGTGCCA+AGG	-	Chr8:17947975-17947994	None:intergenic	40.0%
!!	GCGTATTGCTTTTAGATTGG+TGG	+	Chr8:17948949-17948968	MsG0880043034.01.T01:intron	40.0%
!!	TTTGGCTGCATTGGTCTTAT+TGG	+	Chr8:17947708-17947727	MsG0880043034.01.T01:intron	40.0%
!!!	GCACTTCTGTTTTTGGTTTC+AGG	+	Chr8:17947977-17947996	MsG0880043034.01.T01:CDS	40.0%
	ACCAATGTCGATGTCGTATC+TGG	-	Chr8:17946425-17946444	None:intergenic	45.0%
	ACCAGATACGACATCGACAT+TGG	+	Chr8:17946421-17946440	MsG0880043034.01.T01:intron	45.0%
	ACCCTCTCTTTACACGGTAA+AGG	-	Chr8:17950116-17950135	None:intergenic	45.0%
	ACGAATTCAACAGGCATCCT+TGG	+	Chr8:17947955-17947974	MsG0880043034.01.T01:CDS	45.0%
	AGCTATTAAAACGGGGGGAA+CGG	+	Chr8:17949578-17949597	MsG0880043034.01.T01:intron	45.0%
	AGTGCATGCTCACTTGTACA+AGG	+	Chr8:17948767-17948786	MsG0880043034.01.T01:intron	45.0%
	ATAGAGAAGGGAAAGGGGAA+AGG	-	Chr8:17949197-17949216	None:intergenic	45.0%
	CAATGCAGCCAAATACTGAC+TGG	-	Chr8:17947701-17947720	None:intergenic	45.0%
	CAGTCAGTATTTGGCTGCAT+TGG	+	Chr8:17947699-17947718	MsG0880043034.01.T01:intron	45.0%
	CATCTAACAAACGGAGCACA+AGG	-	Chr8:17945990-17946009	None:intergenic	45.0%
	CCAATCTGGTAGGATATCGT+GGG	+	Chr8:17948922-17948941	MsG0880043034.01.T01:intron	45.0%
	CGACCAGCTGTCAAATTTCT+TGG	-	Chr8:17949132-17949151	None:intergenic	45.0%
	CGTCGTAGCAGTAGTAGTAA+TGG	+	Chr8:17945786-17945805	MsG0880043034.01.T01:CDS	45.0%
	GAAAATCTTGTAGGCAGCTG+AGG	+	Chr8:17949678-17949697	MsG0880043034.01.T01:intron	45.0%
	GAACTTAACAACTGCGACTG+TGG	-	Chr8:17949378-17949397	None:intergenic	45.0%
	GAAGAAAGAAGGAACAGACC+AGG	+	Chr8:17945910-17945929	MsG0880043034.01.T01:CDS	45.0%
	GAGCTTGAATCTAAACCGTC+TGG	+	Chr8:17950297-17950316	MsG0880043034.01.T01:intron	45.0%
	GAGTCAACTACGTGTCTGTT+TGG	+	Chr8:17946464-17946483	MsG0880043034.01.T01:intron	45.0%
	GCCTTTACCGTGTAAAGAGA+GGG	+	Chr8:17950112-17950131	MsG0880043034.01.T01:intron	45.0%
	GGTGACCGTTCAATCAAGAT+TGG	+	Chr8:17950225-17950244	MsG0880043034.01.T01:CDS	45.0%
	GTCGTATCTGGTGTTTGTGT+CGG	-	Chr8:17946413-17946432	None:intergenic	45.0%
	TAGAGAAGGGAAAGGGGAAA+GGG	-	Chr8:17949196-17949215	None:intergenic	45.0%
	TAGGAGGAATCCAATCTGGT+AGG	+	Chr8:17948912-17948931	MsG0880043034.01.T01:intron	45.0%
	TCCAATCTGGTAGGATATCG+TGG	+	Chr8:17948921-17948940	MsG0880043034.01.T01:intron	45.0%
	TCCAGCTAAGTTGCCAAAAG+AGG	+	Chr8:17948084-17948103	MsG0880043034.01.T01:intron	45.0%
	TCTAAACCGTCTGGTATGTG+TGG	+	Chr8:17950306-17950325	MsG0880043034.01.T01:intron	45.0%
	TGCCTTTACCGTGTAAAGAG+AGG	+	Chr8:17950111-17950130	MsG0880043034.01.T01:intron	45.0%
!	GACTCGGAGTGTCTTGTTAA+AGG	+	Chr8:17948659-17948678	MsG0880043034.01.T01:intron	45.0%
!	GCATCTGGTTCGTATGTTTG+AGG	+	Chr8:17949702-17949721	MsG0880043034.01.T01:CDS	45.0%
!	TCGTGTTTGGGGTTGTTTGT+GGG	+	Chr8:17948686-17948705	MsG0880043034.01.T01:intron	45.0%
!	TCTTCGATTTGAAGTGTGGG+TGG	+	Chr8:17946801-17946820	MsG0880043034.01.T01:intron	45.0%
!!	GGCCTTATTAGCACTTCAAG+AGG	+	Chr8:17947834-17947853	MsG0880043034.01.T01:CDS	45.0%
!!	TATCTATGGAGGTATCACGC+TGG	+	Chr8:17947803-17947822	MsG0880043034.01.T01:CDS	45.0%
	ACTGGCATCTACAGTGAGAC+TGG	-	Chr8:17948597-17948616	None:intergenic	50.0%
	AGAGAAGGGAAAGGGGAAAG+GGG	-	Chr8:17949195-17949214	None:intergenic	50.0%
	ATCCAGCTCTTTGCAGTCTC+TGG	-	Chr8:17950334-17950353	None:intergenic	50.0%
	CCCACGATATCCTACCAGAT+TGG	-	Chr8:17948925-17948944	None:intergenic	50.0%
	GGGAAAGGGGAACTGGTTAT+GGG	-	Chr8:17949182-17949201	None:intergenic	50.0%
	GTCTGAAAGCTTCTTCCTCG+CGG	+	Chr8:17948467-17948486	MsG0880043034.01.T01:intron	50.0%
	TCTGAAAGCTTCTTCCTCGC+GGG	+	Chr8:17948468-17948487	MsG0880043034.01.T01:intron	50.0%
!	CTCGTGTTTGGGGTTGTTTG+TGG	+	Chr8:17948685-17948704	MsG0880043034.01.T01:intron	50.0%
!	GCCTCTTTTGGCAACTTAGC+TGG	-	Chr8:17948088-17948107	None:intergenic	50.0%
!!	AGGATCTTGAGTTGACCCGT+AGG	+	Chr8:17950761-17950780	MsG0880043034.01.T01:CDS	50.0%
!!	TATGGAGGTATCACGCTGGA+CGG	+	Chr8:17947807-17947826	MsG0880043034.01.T01:CDS	50.0%
	CACCAGAGACTGCAAAGAGC+TGG	+	Chr8:17950329-17950348	MsG0880043034.01.T01:intron	55.0%
	CGAGTTGCAGGAGATGTGCT+TGG	+	Chr8:17950378-17950397	MsG0880043034.01.T01:intron	55.0%
	CTACGACGAGTGCGTTTACC+AGG	-	Chr8:17945774-17945793	None:intergenic	55.0%
	GAGTTGACCCGTAGGCTTAC+AGG	+	Chr8:17950769-17950788	MsG0880043034.01.T01:CDS	55.0%
	GGGGAAAGGGGAACTGGTTA+TGG	-	Chr8:17949183-17949202	None:intergenic	55.0%
	GTCAAGCACATTCCACGTCC+TGG	+	Chr8:17945753-17945772	MsG0880043034.01.T01:CDS	55.0%
	TCGGATTCCCTGCAGTCACA+GGG	+	Chr8:17950175-17950194	MsG0880043034.01.T01:intron	55.0%
	TTCGGATTCCCTGCAGTCAC+AGG	+	Chr8:17950174-17950193	MsG0880043034.01.T01:intron	55.0%
!!	CTGGTGCCACACATACCAGA+CGG	-	Chr8:17950315-17950334	None:intergenic	55.0%
	CGAGTGCGTTTACCAGGACG+TGG	-	Chr8:17945768-17945787	None:intergenic	60.0%
	GGGAAAGGGGAAAGGGGAAC+TGG	-	Chr8:17949189-17949208	None:intergenic	60.0%
	GGGAGATCCCTGTGACTGCA+GGG	-	Chr8:17950185-17950204	None:intergenic	60.0%
	GTGTCTGGTGTCTGTGTCCG+TGG	-	Chr8:17946103-17946122	None:intergenic	60.0%
	TGGGAGATCCCTGTGACTGC+AGG	-	Chr8:17950186-17950205	None:intergenic	60.0%
!!	GTAGGCAGCTGAGGAGCATC+TGG	+	Chr8:17949687-17949706	MsG0880043034.01.T01:intron	60.0%
	CTCGCGAAGCGCAACTGTCC+TGG	-	Chr8:17945931-17945950	None:intergenic	65.0%
	GGTATCACGCTGGACGGCTG+AGG	+	Chr8:17947813-17947832	MsG0880043034.01.T01:CDS	65.0%
	GTTACGCAGCAAAGCCCGCG+AGG	-	Chr8:17948485-17948504	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	17945744	17950795	17945744	ID=MsG0880043034.01;Name=MsG0880043034.01
Chr8	mRNA	17945744	17950795	17945744	ID=MsG0880043034.01.T01;Parent=MsG0880043034.01;Name=MsG0880043034.01.T01;_AED=0.50;_eAED=0.68;_QI=0\|0\|0\|1\|0\|0\|6\|0\|193
Chr8	exon	17945744	17946014	17945744	ID=MsG0880043034.01.T01:exon:3573;Parent=MsG0880043034.01.T01
Chr8	exon	17947782	17947855	17947782	ID=MsG0880043034.01.T01:exon:3574;Parent=MsG0880043034.01.T01
Chr8	exon	17947949	17947999	17947949	ID=MsG0880043034.01.T01:exon:3575;Parent=MsG0880043034.01.T01
Chr8	exon	17949691	17949765	17949691	ID=MsG0880043034.01.T01:exon:3576;Parent=MsG0880043034.01.T01
Chr8	exon	17950196	17950265	17950196	ID=MsG0880043034.01.T01:exon:3577;Parent=MsG0880043034.01.T01
Chr8	exon	17950755	17950795	17950755	ID=MsG0880043034.01.T01:exon:3578;Parent=MsG0880043034.01.T01
Chr8	CDS	17945744	17946014	17945744	ID=MsG0880043034.01.T01:cds;Parent=MsG0880043034.01.T01
Chr8	CDS	17947782	17947855	17947782	ID=MsG0880043034.01.T01:cds;Parent=MsG0880043034.01.T01
Chr8	CDS	17947949	17947999	17947949	ID=MsG0880043034.01.T01:cds;Parent=MsG0880043034.01.T01
Chr8	CDS	17949691	17949765	17949691	ID=MsG0880043034.01.T01:cds;Parent=MsG0880043034.01.T01
Chr8	CDS	17950196	17950265	17950196	ID=MsG0880043034.01.T01:cds;Parent=MsG0880043034.01.T01
Chr8	CDS	17950755	17950795	17950755	ID=MsG0880043034.01.T01:cds;Parent=MsG0880043034.01.T01

Gene Sequence

>MsG0880043034.01.T01

ATGGCAAGAGTCAAGCACATTCCACGTCCTGGTAAACGCACTCGTCGTAGCAGTAGTAGTAATGGTAAGTTCCAATTTCTAAAACCCTCGTTTTCACAATTTCACATTTTTCTTTCTCAATTTACTCATTTCAAAATTATTTTTCAGCAAATGAGTCTGAGGAAAAGAAGAAAGAAGGAACAGACCAGGACAGTTGCGCTTCGCGAGATTCGTAAATTTCAAAAGGCTGTTAACTTGCTTATACCTTGTGCTCCGTTTGTTAGATGCGTAAGTCAACAGATTACAAACCAACTATCTATGGAGGTATCACGCTGGACGGCTGAGGCCTTATTAGCACTTCAAGAGATTCTTACGAATTCAACAGGCATCCTTGGCACTTCTGTTTTTGGTTTCAGGGCAGCTGAGGAGCATCTGGTTCGTATGTTTGAGGGTGAATGCTCTGTGCACTTCATGCAAAGCGTGTTACCCTTAGGATCTCCCATTCATTCATTCGGAAGATTGGTGACCGTTCAATCAAGATTGGACGGTCCAAACATTTTAGTGAAAAAGGATCTTGAGTTGACCCGTAGGCTTACAGGATAG

Protein sequence

>MsG0880043034.01.T01

MARVKHIPRPGKRTRRSSSSNGKFQFLKPSFSQFHIFLSQFTHFKIIFQQMSLRKRRKKEQTRTVALREIRKFQKAVNLLIPCAPFVRCVSQQITNQLSMEVSRWTAEALLALQEILTNSTGILGTSVFGFRAAEEHLVRMFEGECSVHFMQSVLPLGSPIHSFGRLVTVQSRLDGPNILVKKDLELTRRLTG*