AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039243.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039243.01.T01 MTR_7g068710 99.398 166 1 0 1 166 365 530 7.28e-119 346
MsG0780039243.01.T01 MTR_4g107490 62.651 166 62 0 1 166 382 547 5.16e-68 216
MsG0780039243.01.T01 MTR_7g091890 59.394 165 67 0 2 166 368 532 1.68e-61 198
MsG0780039243.01.T01 MTR_1g052530 57.576 165 70 0 2 166 362 526 4.96e-61 197
MsG0780039243.01.T01 MTR_4g066660 45.732 164 88 1 1 164 381 543 4.42e-45 155
MsG0780039243.01.T01 MTR_0028s0170 50.376 133 65 1 1 133 387 518 6.44e-39 139
MsG0780039243.01.T01 MTR_8g099095 50.376 133 65 1 1 133 375 506 2.10e-38 137
MsG0780039243.01.T01 MTR_5g009830 49.624 133 66 1 1 133 375 506 5.13e-38 136
MsG0780039243.01.T01 MTR_5g089320 49.624 133 66 1 1 133 377 508 6.92e-38 135
MsG0780039243.01.T01 MTR_4g132070 48.120 133 68 1 1 133 400 531 3.22e-37 134
MsG0780039243.01.T01 MTR_1g055255 45.570 158 79 2 1 153 433 588 6.72e-37 134
MsG0780039243.01.T01 MTR_5g099240 48.872 133 66 1 1 133 333 463 1.04e-36 132
MsG0780039243.01.T01 MTR_5g092810 47.015 134 70 1 1 134 401 533 1.57e-36 132
MsG0780039243.01.T01 MTR_5g099240 48.872 133 66 1 1 133 405 535 2.38e-36 132
MsG0780039243.01.T01 MTR_1g041150 48.872 133 66 1 1 133 427 557 3.38e-36 132
MsG0780039243.01.T01 MTR_1g096490 44.966 149 80 1 1 149 339 485 3.21e-35 128
MsG0780039243.01.T01 MTR_3g051770 45.324 139 70 1 1 133 392 530 6.15e-35 128
MsG0780039243.01.T01 MTR_4g132040 47.727 132 68 1 2 133 405 535 6.87e-35 127
MsG0780039243.01.T01 MTR_1g054865 48.855 131 65 1 1 131 470 598 7.38e-34 125
MsG0780039243.01.T01 MTR_3g098090 45.113 133 71 1 1 133 341 471 3.19e-33 122
MsG0780039243.01.T01 MTR_3g098070 45.113 133 71 1 1 133 338 468 6.20e-33 122
MsG0780039243.01.T01 MTR_7g106710 46.212 132 69 1 2 133 445 574 2.21e-32 121
MsG0780039243.01.T01 MTR_8g095440 43.609 133 73 1 1 133 339 469 6.32e-32 119
MsG0780039243.01.T01 MTR_1g026190 43.284 134 75 1 1 134 391 523 4.28e-31 117
MsG0780039243.01.T01 MTR_7g106710 48.000 100 52 0 2 101 445 544 6.93e-25 100
MsG0780039243.01.T01 MTR_4g009290 47.959 98 50 1 67 164 145 241 1.06e-24 96.3
MsG0780039243.01.T01 MTR_1g076650 37.121 132 82 1 2 132 17 148 1.66e-22 88.2
MsG0780039243.01.T01 MTR_1g041285 37.121 132 82 1 2 132 17 148 2.19e-22 87.8
MsG0780039243.01.T01 MTR_5g089440 40.602 133 43 3 1 133 83 179 2.12e-21 86.3
MsG0780039243.01.T01 MTR_7g087610 36.923 130 81 1 2 130 17 146 3.80e-21 84.3
MsG0780039243.01.T01 MTR_5g088320 36.154 130 82 1 2 130 17 146 6.49e-21 84.0
MsG0780039243.01.T01 MTR_6g025320 36.154 130 82 1 2 130 17 146 6.85e-21 84.0
MsG0780039243.01.T01 MTR_5g022030 35.714 140 77 4 2 134 411 544 1.24e-19 85.1
MsG0780039243.01.T01 MTR_4g112460 33.083 133 86 2 1 130 15 147 2.05e-18 77.8
MsG0780039243.01.T01 MTR_1g071150 32.308 130 86 2 2 130 17 145 1.69e-17 75.1
MsG0780039243.01.T01 MTR_0168s0120 38.235 102 62 1 30 130 9 110 6.39e-17 72.4
MsG0780039243.01.T01 MTR_6g025320 38.235 102 62 1 30 130 9 110 6.39e-17 72.4
MsG0780039243.01.T01 MTR_8g066630 29.710 138 93 1 1 134 21 158 8.28e-17 73.6
MsG0780039243.01.T01 MTR_8g036075 33.784 148 83 4 1 136 53 197 1.39e-16 73.9
MsG0780039243.01.T01 MTR_3g089070 32.540 126 85 0 6 131 15 140 9.09e-16 70.5
MsG0780039243.01.T01 MTR_3g089090 32.540 126 85 0 6 131 14 139 1.06e-15 70.1
MsG0780039243.01.T01 MTR_7g115040 34.848 132 85 1 2 132 17 148 2.34e-15 69.3
MsG0780039243.01.T01 MTR_7g075040 33.793 145 86 4 1 135 51 195 4.83e-15 69.7
MsG0780039243.01.T01 MTR_1g046950 32.331 133 87 1 1 130 8 140 5.84e-15 68.2
MsG0780039243.01.T01 MTR_6g079570 32.061 131 88 1 1 130 30 160 1.19e-14 68.2
MsG0780039243.01.T01 MTR_8g105230 36.424 151 83 5 1 147 40 181 1.32e-14 68.6
MsG0780039243.01.T01 MTR_8g107110 30.769 130 90 0 1 130 28 157 2.02e-14 67.4
MsG0780039243.01.T01 MTR_5g079340 34.091 132 83 2 1 130 8 137 2.51e-14 66.6
MsG0780039243.01.T01 MTR_4g067270 32.353 136 89 2 1 133 9 144 4.05e-14 66.2
MsG0780039243.01.T01 MTR_5g011850 30.769 130 87 2 2 130 17 144 9.83e-14 65.1
MsG0780039243.01.T01 MTR_7g074020 30.657 137 93 2 2 137 35 170 2.12e-13 64.7
MsG0780039243.01.T01 MTR_8g069915 30.714 140 93 3 1 136 16 155 3.30e-13 64.3
MsG0780039243.01.T01 MTR_4g103630 30.159 126 88 0 6 131 15 140 4.30e-13 63.2
MsG0780039243.01.T01 MTR_4g103650 29.600 125 88 0 6 130 11 135 5.19e-13 63.2
MsG0780039243.01.T01 MTR_5g022030 36.082 97 55 2 2 91 411 507 1.08e-12 65.1
MsG0780039243.01.T01 MTR_1g032070 35.821 134 79 4 1 130 50 180 3.04e-12 62.4
MsG0780039243.01.T01 MTR_7g089760 30.496 141 87 3 1 134 9 145 5.57e-12 60.5
MsG0780039243.01.T01 MTR_6g023460 28.462 130 93 0 1 130 12 141 6.74e-12 60.1
MsG0780039243.01.T01 MTR_5g017550 28.571 133 95 0 1 133 52 184 7.58e-12 60.8
MsG0780039243.01.T01 MTR_4g115170 27.632 152 91 2 1 133 68 219 1.18e-11 61.2
MsG0780039243.01.T01 MTR_4g103655 28.800 125 89 0 6 130 15 139 1.31e-11 59.3
MsG0780039243.01.T01 MTR_6g007613 29.231 130 91 1 2 130 34 163 1.38e-11 60.1
MsG0780039243.01.T01 MTR_3g067610 32.308 130 85 2 1 130 9 135 4.79e-11 57.8
MsG0780039243.01.T01 MTR_3g088655 30.065 153 74 5 1 130 12 154 7.38e-11 57.8
MsG0780039243.01.T01 MTR_4g086260 31.061 132 86 2 1 130 61 189 8.38e-11 58.2
MsG0780039243.01.T02 MTR_7g068710 99.398 166 1 0 1 166 365 530 7.28e-119 346
MsG0780039243.01.T02 MTR_4g107490 62.651 166 62 0 1 166 382 547 5.16e-68 216
MsG0780039243.01.T02 MTR_7g091890 59.394 165 67 0 2 166 368 532 1.68e-61 198
MsG0780039243.01.T02 MTR_1g052530 57.576 165 70 0 2 166 362 526 4.96e-61 197
MsG0780039243.01.T02 MTR_4g066660 45.732 164 88 1 1 164 381 543 4.42e-45 155
MsG0780039243.01.T02 MTR_0028s0170 50.376 133 65 1 1 133 387 518 6.44e-39 139
MsG0780039243.01.T02 MTR_8g099095 50.376 133 65 1 1 133 375 506 2.10e-38 137
MsG0780039243.01.T02 MTR_5g009830 49.624 133 66 1 1 133 375 506 5.13e-38 136
MsG0780039243.01.T02 MTR_5g089320 49.624 133 66 1 1 133 377 508 6.92e-38 135
MsG0780039243.01.T02 MTR_4g132070 48.120 133 68 1 1 133 400 531 3.22e-37 134
MsG0780039243.01.T02 MTR_1g055255 45.570 158 79 2 1 153 433 588 6.72e-37 134
MsG0780039243.01.T02 MTR_5g099240 48.872 133 66 1 1 133 333 463 1.04e-36 132
MsG0780039243.01.T02 MTR_5g092810 47.015 134 70 1 1 134 401 533 1.57e-36 132
MsG0780039243.01.T02 MTR_5g099240 48.872 133 66 1 1 133 405 535 2.38e-36 132
MsG0780039243.01.T02 MTR_1g041150 48.872 133 66 1 1 133 427 557 3.38e-36 132
MsG0780039243.01.T02 MTR_1g096490 44.966 149 80 1 1 149 339 485 3.21e-35 128
MsG0780039243.01.T02 MTR_3g051770 45.324 139 70 1 1 133 392 530 6.15e-35 128
MsG0780039243.01.T02 MTR_4g132040 47.727 132 68 1 2 133 405 535 6.87e-35 127
MsG0780039243.01.T02 MTR_1g054865 48.855 131 65 1 1 131 470 598 7.38e-34 125
MsG0780039243.01.T02 MTR_3g098090 45.113 133 71 1 1 133 341 471 3.19e-33 122
MsG0780039243.01.T02 MTR_3g098070 45.113 133 71 1 1 133 338 468 6.20e-33 122
MsG0780039243.01.T02 MTR_7g106710 46.212 132 69 1 2 133 445 574 2.21e-32 121
MsG0780039243.01.T02 MTR_8g095440 43.609 133 73 1 1 133 339 469 6.32e-32 119
MsG0780039243.01.T02 MTR_1g026190 43.284 134 75 1 1 134 391 523 4.28e-31 117
MsG0780039243.01.T02 MTR_7g106710 48.000 100 52 0 2 101 445 544 6.93e-25 100
MsG0780039243.01.T02 MTR_4g009290 47.959 98 50 1 67 164 145 241 1.06e-24 96.3
MsG0780039243.01.T02 MTR_1g076650 37.121 132 82 1 2 132 17 148 1.66e-22 88.2
MsG0780039243.01.T02 MTR_1g041285 37.121 132 82 1 2 132 17 148 2.19e-22 87.8
MsG0780039243.01.T02 MTR_5g089440 40.602 133 43 3 1 133 83 179 2.12e-21 86.3
MsG0780039243.01.T02 MTR_7g087610 36.923 130 81 1 2 130 17 146 3.80e-21 84.3
MsG0780039243.01.T02 MTR_5g088320 36.154 130 82 1 2 130 17 146 6.49e-21 84.0
MsG0780039243.01.T02 MTR_6g025320 36.154 130 82 1 2 130 17 146 6.85e-21 84.0
MsG0780039243.01.T02 MTR_5g022030 35.714 140 77 4 2 134 411 544 1.24e-19 85.1
MsG0780039243.01.T02 MTR_4g112460 33.083 133 86 2 1 130 15 147 2.05e-18 77.8
MsG0780039243.01.T02 MTR_1g071150 32.308 130 86 2 2 130 17 145 1.69e-17 75.1
MsG0780039243.01.T02 MTR_0168s0120 38.235 102 62 1 30 130 9 110 6.39e-17 72.4
MsG0780039243.01.T02 MTR_6g025320 38.235 102 62 1 30 130 9 110 6.39e-17 72.4
MsG0780039243.01.T02 MTR_8g066630 29.710 138 93 1 1 134 21 158 8.28e-17 73.6
MsG0780039243.01.T02 MTR_8g036075 33.784 148 83 4 1 136 53 197 1.39e-16 73.9
MsG0780039243.01.T02 MTR_3g089070 32.540 126 85 0 6 131 15 140 9.09e-16 70.5
MsG0780039243.01.T02 MTR_3g089090 32.540 126 85 0 6 131 14 139 1.06e-15 70.1
MsG0780039243.01.T02 MTR_7g115040 34.848 132 85 1 2 132 17 148 2.34e-15 69.3
MsG0780039243.01.T02 MTR_7g075040 33.793 145 86 4 1 135 51 195 4.83e-15 69.7
MsG0780039243.01.T02 MTR_1g046950 32.331 133 87 1 1 130 8 140 5.84e-15 68.2
MsG0780039243.01.T02 MTR_6g079570 32.061 131 88 1 1 130 30 160 1.19e-14 68.2
MsG0780039243.01.T02 MTR_8g105230 36.424 151 83 5 1 147 40 181 1.32e-14 68.6
MsG0780039243.01.T02 MTR_8g107110 30.769 130 90 0 1 130 28 157 2.02e-14 67.4
MsG0780039243.01.T02 MTR_5g079340 34.091 132 83 2 1 130 8 137 2.51e-14 66.6
MsG0780039243.01.T02 MTR_4g067270 32.353 136 89 2 1 133 9 144 4.05e-14 66.2
MsG0780039243.01.T02 MTR_5g011850 30.769 130 87 2 2 130 17 144 9.83e-14 65.1
MsG0780039243.01.T02 MTR_7g074020 30.657 137 93 2 2 137 35 170 2.12e-13 64.7
MsG0780039243.01.T02 MTR_8g069915 30.714 140 93 3 1 136 16 155 3.30e-13 64.3
MsG0780039243.01.T02 MTR_4g103630 30.159 126 88 0 6 131 15 140 4.30e-13 63.2
MsG0780039243.01.T02 MTR_4g103650 29.600 125 88 0 6 130 11 135 5.19e-13 63.2
MsG0780039243.01.T02 MTR_5g022030 36.082 97 55 2 2 91 411 507 1.08e-12 65.1
MsG0780039243.01.T02 MTR_1g032070 35.821 134 79 4 1 130 50 180 3.04e-12 62.4
MsG0780039243.01.T02 MTR_7g089760 30.496 141 87 3 1 134 9 145 5.57e-12 60.5
MsG0780039243.01.T02 MTR_6g023460 28.462 130 93 0 1 130 12 141 6.74e-12 60.1
MsG0780039243.01.T02 MTR_5g017550 28.571 133 95 0 1 133 52 184 7.58e-12 60.8
MsG0780039243.01.T02 MTR_4g115170 27.632 152 91 2 1 133 68 219 1.18e-11 61.2
MsG0780039243.01.T02 MTR_4g103655 28.800 125 89 0 6 130 15 139 1.31e-11 59.3
MsG0780039243.01.T02 MTR_6g007613 29.231 130 91 1 2 130 34 163 1.38e-11 60.1
MsG0780039243.01.T02 MTR_3g067610 32.308 130 85 2 1 130 9 135 4.79e-11 57.8
MsG0780039243.01.T02 MTR_3g088655 30.065 153 74 5 1 130 12 154 7.38e-11 57.8
MsG0780039243.01.T02 MTR_4g086260 31.061 132 86 2 1 130 61 189 8.38e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039243.01.T01 AT3G51850 84.337 166 26 0 1 166 363 528 2.35e-99 296
MsG0780039243.01.T01 AT1G74740 61.963 163 62 0 1 163 368 530 4.50e-65 208
MsG0780039243.01.T01 AT5G12480 59.880 167 64 2 2 166 275 440 8.73e-64 202
MsG0780039243.01.T01 AT5G12480 59.880 167 64 2 2 166 369 534 1.22e-62 201
MsG0780039243.01.T01 AT3G51850 81.197 117 22 0 1 117 363 479 2.88e-62 200
MsG0780039243.01.T01 AT5G19450 59.036 166 67 1 2 166 367 532 3.19e-62 200
MsG0780039243.01.T01 AT5G19450 59.036 166 67 1 2 166 367 532 3.19e-62 200
MsG0780039243.01.T01 AT1G18890 57.669 163 69 0 1 163 372 534 1.13e-58 191
MsG0780039243.01.T01 AT3G57530 55.215 163 70 2 2 163 373 533 4.72e-55 182
MsG0780039243.01.T01 AT2G41860 54.037 161 74 0 2 162 364 524 3.21e-53 177
MsG0780039243.01.T01 AT2G41860 54.037 161 74 0 2 162 364 524 3.35e-53 176
MsG0780039243.01.T01 AT2G31500 49.390 164 74 2 1 158 375 535 2.72e-46 159
MsG0780039243.01.T01 AT5G19360 51.880 133 63 1 1 133 377 508 2.35e-41 145
MsG0780039243.01.T01 AT5G12180 51.880 133 63 1 1 133 382 513 5.04e-41 144
MsG0780039243.01.T01 AT4G38230 49.624 133 65 1 1 133 189 319 1.20e-39 137
MsG0780039243.01.T01 AT4G38230 48.905 137 68 1 1 137 333 467 1.32e-38 137
MsG0780039243.01.T01 AT4G38230 48.905 137 68 1 1 137 333 467 1.32e-38 137
MsG0780039243.01.T01 AT4G38230 48.905 137 68 1 1 137 363 497 1.44e-38 137
MsG0780039243.01.T01 AT2G17290 48.120 133 67 1 1 133 394 524 3.68e-37 134
MsG0780039243.01.T01 AT2G17290 48.120 133 67 1 1 133 394 524 3.68e-37 134
MsG0780039243.01.T01 AT4G09570 48.872 133 66 1 1 133 334 464 8.75e-37 132
MsG0780039243.01.T01 AT1G35670 48.120 133 67 1 1 133 335 465 1.10e-36 132
MsG0780039243.01.T01 AT4G04710 48.120 133 68 1 1 133 327 458 2.26e-36 131
MsG0780039243.01.T01 AT4G04710 48.120 133 68 1 1 133 341 472 2.26e-36 131
MsG0780039243.01.T01 AT4G04710 48.120 133 68 1 1 133 354 485 2.54e-36 131
MsG0780039243.01.T01 AT4G04740 42.958 142 80 1 1 142 377 517 2.82e-36 131
MsG0780039243.01.T01 AT4G04740 42.958 142 80 1 1 142 377 517 2.82e-36 131
MsG0780039243.01.T01 AT4G04740 42.958 142 80 1 1 142 377 517 2.82e-36 131
MsG0780039243.01.T01 AT4G04740 42.958 142 80 1 1 142 377 517 2.82e-36 131
MsG0780039243.01.T01 AT4G04740 42.958 142 80 1 1 142 377 517 2.82e-36 131
MsG0780039243.01.T01 AT4G04740 42.958 142 80 1 1 142 377 517 2.82e-36 131
MsG0780039243.01.T01 AT4G23650 46.617 133 70 1 1 133 387 518 5.60e-36 130
MsG0780039243.01.T01 AT3G10660 46.269 134 70 1 1 134 495 626 2.49e-35 130
MsG0780039243.01.T01 AT3G10660 46.269 134 70 1 1 134 495 626 2.49e-35 130
MsG0780039243.01.T01 AT4G04710 48.148 135 67 2 1 133 354 487 4.16e-35 128
MsG0780039243.01.T01 AT4G35310 46.617 133 69 1 1 133 406 536 8.77e-35 127
MsG0780039243.01.T01 AT4G35310 46.617 133 69 1 1 133 406 536 8.77e-35 127
MsG0780039243.01.T01 AT4G21940 47.368 133 69 1 1 133 410 541 1.14e-34 127
MsG0780039243.01.T01 AT4G21940 47.368 133 69 1 1 133 410 541 1.21e-34 127
MsG0780039243.01.T01 AT1G50700 45.865 133 71 1 1 133 382 513 4.33e-34 125
MsG0780039243.01.T01 AT4G04720 44.030 134 74 1 1 134 388 520 5.93e-34 125
MsG0780039243.01.T01 AT4G04720 44.030 134 74 1 1 134 388 520 5.93e-34 125
MsG0780039243.01.T01 AT3G20410 43.056 144 79 2 1 143 400 541 8.24e-34 125
MsG0780039243.01.T01 AT3G20410 43.056 144 79 2 1 143 400 541 8.24e-34 125
MsG0780039243.01.T01 AT5G04870 44.776 134 72 1 1 134 459 590 9.94e-34 125
MsG0780039243.01.T01 AT1G76040 45.522 134 70 2 2 134 183 314 2.38e-33 120
MsG0780039243.01.T01 AT1G76040 45.522 134 70 2 2 134 183 314 2.38e-33 120
MsG0780039243.01.T01 AT5G23580 45.802 131 69 1 1 131 331 459 4.60e-32 119
MsG0780039243.01.T01 AT1G76040 45.522 134 70 2 2 134 421 552 4.92e-32 120
MsG0780039243.01.T01 AT4G04695 42.537 134 76 1 1 134 340 472 1.17e-31 118
MsG0780039243.01.T01 AT2G38910 46.565 131 68 1 1 131 443 571 1.47e-31 119
MsG0780039243.01.T01 AT4G04700 43.182 132 74 1 1 132 340 470 2.23e-30 115
MsG0780039243.01.T01 AT1G50700 40.000 160 67 3 1 133 382 539 2.05e-29 112
MsG0780039243.01.T01 AT4G04740 42.241 116 66 1 1 116 377 491 2.10e-27 107
MsG0780039243.01.T01 AT1G61950 41.481 135 76 2 1 134 408 540 2.06e-26 104
MsG0780039243.01.T01 AT3G43810 35.714 140 89 1 2 140 17 156 4.05e-22 88.6
MsG0780039243.01.T01 AT3G22930 36.923 130 81 1 2 130 40 169 5.62e-22 87.4
MsG0780039243.01.T01 AT2G27030 36.154 130 82 1 2 130 17 146 6.85e-21 84.7
MsG0780039243.01.T01 AT3G56800 36.154 130 82 1 2 130 17 146 7.18e-21 84.0
MsG0780039243.01.T01 AT3G43810 36.154 130 82 1 2 130 17 146 7.18e-21 84.0
MsG0780039243.01.T01 AT2G27030 36.154 130 82 1 2 130 17 146 7.18e-21 84.0
MsG0780039243.01.T01 AT2G41110 36.154 130 82 1 2 130 17 146 7.18e-21 84.0
MsG0780039243.01.T01 AT5G21274 36.154 130 82 1 2 130 17 146 7.25e-21 84.0
MsG0780039243.01.T01 AT5G37780 37.121 132 78 2 2 130 17 146 1.01e-20 83.6
MsG0780039243.01.T01 AT1G66410 37.121 132 78 2 2 130 17 146 1.01e-20 83.6
MsG0780039243.01.T01 AT4G21940 49.398 83 42 0 1 83 410 492 3.10e-20 87.0
MsG0780039243.01.T01 AT4G14640 34.615 130 84 1 2 130 18 147 6.84e-20 81.3
MsG0780039243.01.T01 AT2G17890 33.571 140 80 4 2 134 420 553 1.29e-19 85.1
MsG0780039243.01.T01 AT1G50700 44.578 83 46 0 1 83 382 464 3.98e-19 83.6
MsG0780039243.01.T01 AT5G66210 35.915 142 74 5 2 134 374 507 1.04e-18 82.4
MsG0780039243.01.T01 AT5G66210 35.915 142 74 5 2 134 374 507 1.04e-18 82.4
MsG0780039243.01.T01 AT5G37780 36.585 123 73 2 11 130 13 133 1.12e-18 77.8
MsG0780039243.01.T01 AT2G41110 35.537 121 77 1 11 130 38 158 2.31e-18 77.8
MsG0780039243.01.T01 AT5G37780 36.585 123 73 2 11 130 41 161 2.61e-18 77.4
MsG0780039243.01.T01 AT1G66410 36.585 123 73 2 11 130 36 156 2.74e-18 77.4
MsG0780039243.01.T01 AT5G37780 36.585 123 73 2 11 130 52 172 3.85e-18 77.4
MsG0780039243.01.T01 AT4G14640 33.884 121 79 1 11 130 9 129 4.84e-18 76.3
MsG0780039243.01.T01 AT1G76040 44.048 84 47 0 2 85 421 504 5.42e-18 80.5
MsG0780039243.01.T01 AT1G18530 30.714 140 93 2 1 136 11 150 2.15e-17 75.1
MsG0780039243.01.T01 AT3G43810 38.235 102 62 1 30 130 9 110 6.69e-17 72.4
MsG0780039243.01.T01 AT3G43810 38.235 102 62 1 30 130 9 110 6.69e-17 72.4
MsG0780039243.01.T01 AT1G66410 39.423 104 58 2 30 130 9 110 8.47e-17 72.4
MsG0780039243.01.T01 AT1G66410 39.423 104 58 2 30 130 9 110 8.47e-17 72.4
MsG0780039243.01.T01 AT3G50360 32.576 132 86 3 2 131 32 162 1.50e-16 73.2
MsG0780039243.01.T01 AT1G24620 37.681 138 79 5 1 134 41 175 7.47e-16 71.6
MsG0780039243.01.T01 AT4G36070 30.000 140 85 4 2 134 383 516 1.46e-15 73.6
MsG0780039243.01.T01 AT4G36070 30.000 140 85 4 2 134 383 516 1.49e-15 73.6
MsG0780039243.01.T01 AT3G59440 29.630 135 93 1 1 133 55 189 2.43e-15 70.5
MsG0780039243.01.T01 AT1G76640 33.813 139 79 3 1 131 26 159 3.51e-15 69.3
MsG0780039243.01.T01 AT4G03290 31.655 139 89 2 1 133 9 147 4.39e-15 68.9
MsG0780039243.01.T01 AT1G05990 31.206 141 85 3 1 133 9 145 6.90e-15 68.2
MsG0780039243.01.T01 AT3G51850 68.627 51 16 0 1 51 363 413 1.26e-14 70.9
MsG0780039243.01.T01 AT2G43290 31.915 141 88 3 1 133 69 209 1.45e-14 68.9
MsG0780039243.01.T01 AT3G25600 28.571 140 96 2 1 136 16 155 1.13e-13 65.5
MsG0780039243.01.T01 AT5G66210 37.624 101 52 3 2 93 374 472 1.18e-13 68.2
MsG0780039243.01.T01 AT1G62820 31.538 130 86 2 2 130 18 145 1.47e-13 64.7
MsG0780039243.01.T01 AT5G37770 31.159 138 90 2 1 133 21 158 1.76e-13 64.7
MsG0780039243.01.T01 AT5G37770 31.159 138 90 2 1 133 21 158 1.76e-13 64.7
MsG0780039243.01.T01 AT4G37010 29.545 132 92 1 1 131 31 162 1.78e-13 65.1
MsG0780039243.01.T01 AT4G37010 29.545 132 92 1 1 131 35 166 1.98e-13 65.1
MsG0780039243.01.T01 AT3G10190 32.824 131 86 2 2 130 75 205 2.34e-13 65.5
MsG0780039243.01.T01 AT5G66210 37.374 99 51 3 2 91 374 470 2.37e-13 67.0
MsG0780039243.01.T01 AT2G41100 29.932 147 85 2 2 130 71 217 4.25e-13 65.9
MsG0780039243.01.T01 AT2G41100 29.932 147 85 2 2 130 71 217 4.25e-13 65.9
MsG0780039243.01.T01 AT2G41100 29.932 147 85 2 2 130 71 217 4.25e-13 65.9
MsG0780039243.01.T01 AT2G41100 26.708 161 101 2 2 145 17 177 4.42e-13 65.9
MsG0780039243.01.T01 AT2G41100 29.932 147 85 2 2 130 106 252 4.69e-13 65.9
MsG0780039243.01.T01 AT2G41100 26.708 161 101 2 2 145 17 177 4.42e-13 65.9
MsG0780039243.01.T01 AT2G41100 29.932 147 85 2 2 130 106 252 4.69e-13 65.9
MsG0780039243.01.T01 AT4G14640 34.409 93 60 1 2 93 18 110 7.84e-13 62.0
MsG0780039243.01.T01 AT1G12310 30.000 130 88 2 2 130 18 145 8.44e-13 62.8
MsG0780039243.01.T01 AT4G12860 31.429 140 85 3 1 133 9 144 9.33e-13 62.8
MsG0780039243.01.T01 AT2G15680 31.343 134 87 2 1 132 54 184 1.04e-12 63.2
MsG0780039243.01.T01 AT3G22930 36.667 90 56 1 2 90 40 129 1.22e-12 62.0
MsG0780039243.01.T01 AT3G03000 28.676 136 95 1 1 134 24 159 3.77e-12 61.2
MsG0780039243.01.T01 AT1G76650 31.111 135 85 2 1 131 47 177 3.85e-12 61.6
MsG0780039243.01.T01 AT1G76650 31.111 135 85 2 1 131 47 177 3.85e-12 61.6
MsG0780039243.01.T01 AT1G18210 29.851 134 83 3 1 130 27 153 8.97e-12 60.5
MsG0780039243.01.T01 AT1G18210 29.851 134 83 3 1 130 27 153 8.97e-12 60.5
MsG0780039243.01.T01 AT1G66400 30.075 133 90 1 1 130 19 151 1.02e-11 60.1
MsG0780039243.01.T01 AT1G64480 34.043 141 73 7 1 126 42 177 1.04e-11 60.8
MsG0780039243.01.T01 AT1G32250 26.950 141 96 2 1 134 20 160 1.53e-11 59.7
MsG0780039243.01.T01 AT1G64480 34.043 141 73 7 1 126 42 177 1.58e-11 60.5
MsG0780039243.01.T01 AT1G64480 34.043 141 73 7 1 126 42 177 1.58e-11 60.5
MsG0780039243.01.T01 AT1G64480 34.043 141 73 7 1 126 42 177 1.58e-11 60.5
MsG0780039243.01.T01 AT2G41100 31.933 119 63 2 30 130 9 127 4.80e-11 58.9
MsG0780039243.01.T01 AT2G41090 32.576 132 81 3 2 130 17 143 8.45e-11 58.2
MsG0780039243.01.T01 AT1G73630 27.206 136 88 3 1 132 24 152 9.00e-11 57.8
MsG0780039243.01.T02 AT3G51850 84.337 166 26 0 1 166 363 528 2.35e-99 296
MsG0780039243.01.T02 AT1G74740 61.963 163 62 0 1 163 368 530 4.50e-65 208
MsG0780039243.01.T02 AT5G12480 59.880 167 64 2 2 166 275 440 8.73e-64 202
MsG0780039243.01.T02 AT5G12480 59.880 167 64 2 2 166 369 534 1.22e-62 201
MsG0780039243.01.T02 AT3G51850 81.197 117 22 0 1 117 363 479 2.88e-62 200
MsG0780039243.01.T02 AT5G19450 59.036 166 67 1 2 166 367 532 3.19e-62 200
MsG0780039243.01.T02 AT5G19450 59.036 166 67 1 2 166 367 532 3.19e-62 200
MsG0780039243.01.T02 AT1G18890 57.669 163 69 0 1 163 372 534 1.13e-58 191
MsG0780039243.01.T02 AT3G57530 55.215 163 70 2 2 163 373 533 4.72e-55 182
MsG0780039243.01.T02 AT2G41860 54.037 161 74 0 2 162 364 524 3.21e-53 177
MsG0780039243.01.T02 AT2G41860 54.037 161 74 0 2 162 364 524 3.35e-53 176
MsG0780039243.01.T02 AT2G31500 49.390 164 74 2 1 158 375 535 2.72e-46 159
MsG0780039243.01.T02 AT5G19360 51.880 133 63 1 1 133 377 508 2.35e-41 145
MsG0780039243.01.T02 AT5G12180 51.880 133 63 1 1 133 382 513 5.04e-41 144
MsG0780039243.01.T02 AT4G38230 49.624 133 65 1 1 133 189 319 1.20e-39 137
MsG0780039243.01.T02 AT4G38230 48.905 137 68 1 1 137 333 467 1.32e-38 137
MsG0780039243.01.T02 AT4G38230 48.905 137 68 1 1 137 333 467 1.32e-38 137
MsG0780039243.01.T02 AT4G38230 48.905 137 68 1 1 137 363 497 1.44e-38 137
MsG0780039243.01.T02 AT2G17290 48.120 133 67 1 1 133 394 524 3.68e-37 134
MsG0780039243.01.T02 AT2G17290 48.120 133 67 1 1 133 394 524 3.68e-37 134
MsG0780039243.01.T02 AT4G09570 48.872 133 66 1 1 133 334 464 8.75e-37 132
MsG0780039243.01.T02 AT1G35670 48.120 133 67 1 1 133 335 465 1.10e-36 132
MsG0780039243.01.T02 AT4G04710 48.120 133 68 1 1 133 327 458 2.26e-36 131
MsG0780039243.01.T02 AT4G04710 48.120 133 68 1 1 133 341 472 2.26e-36 131
MsG0780039243.01.T02 AT4G04710 48.120 133 68 1 1 133 354 485 2.54e-36 131
MsG0780039243.01.T02 AT4G04740 42.958 142 80 1 1 142 377 517 2.82e-36 131
MsG0780039243.01.T02 AT4G04740 42.958 142 80 1 1 142 377 517 2.82e-36 131
MsG0780039243.01.T02 AT4G04740 42.958 142 80 1 1 142 377 517 2.82e-36 131
MsG0780039243.01.T02 AT4G04740 42.958 142 80 1 1 142 377 517 2.82e-36 131
MsG0780039243.01.T02 AT4G04740 42.958 142 80 1 1 142 377 517 2.82e-36 131
MsG0780039243.01.T02 AT4G04740 42.958 142 80 1 1 142 377 517 2.82e-36 131
MsG0780039243.01.T02 AT4G23650 46.617 133 70 1 1 133 387 518 5.60e-36 130
MsG0780039243.01.T02 AT3G10660 46.269 134 70 1 1 134 495 626 2.49e-35 130
MsG0780039243.01.T02 AT3G10660 46.269 134 70 1 1 134 495 626 2.49e-35 130
MsG0780039243.01.T02 AT4G04710 48.148 135 67 2 1 133 354 487 4.16e-35 128
MsG0780039243.01.T02 AT4G35310 46.617 133 69 1 1 133 406 536 8.77e-35 127
MsG0780039243.01.T02 AT4G35310 46.617 133 69 1 1 133 406 536 8.77e-35 127
MsG0780039243.01.T02 AT4G21940 47.368 133 69 1 1 133 410 541 1.14e-34 127
MsG0780039243.01.T02 AT4G21940 47.368 133 69 1 1 133 410 541 1.21e-34 127
MsG0780039243.01.T02 AT1G50700 45.865 133 71 1 1 133 382 513 4.33e-34 125
MsG0780039243.01.T02 AT4G04720 44.030 134 74 1 1 134 388 520 5.93e-34 125
MsG0780039243.01.T02 AT4G04720 44.030 134 74 1 1 134 388 520 5.93e-34 125
MsG0780039243.01.T02 AT3G20410 43.056 144 79 2 1 143 400 541 8.24e-34 125
MsG0780039243.01.T02 AT3G20410 43.056 144 79 2 1 143 400 541 8.24e-34 125
MsG0780039243.01.T02 AT5G04870 44.776 134 72 1 1 134 459 590 9.94e-34 125
MsG0780039243.01.T02 AT1G76040 45.522 134 70 2 2 134 183 314 2.38e-33 120
MsG0780039243.01.T02 AT1G76040 45.522 134 70 2 2 134 183 314 2.38e-33 120
MsG0780039243.01.T02 AT5G23580 45.802 131 69 1 1 131 331 459 4.60e-32 119
MsG0780039243.01.T02 AT1G76040 45.522 134 70 2 2 134 421 552 4.92e-32 120
MsG0780039243.01.T02 AT4G04695 42.537 134 76 1 1 134 340 472 1.17e-31 118
MsG0780039243.01.T02 AT2G38910 46.565 131 68 1 1 131 443 571 1.47e-31 119
MsG0780039243.01.T02 AT4G04700 43.182 132 74 1 1 132 340 470 2.23e-30 115
MsG0780039243.01.T02 AT1G50700 40.000 160 67 3 1 133 382 539 2.05e-29 112
MsG0780039243.01.T02 AT4G04740 42.241 116 66 1 1 116 377 491 2.10e-27 107
MsG0780039243.01.T02 AT1G61950 41.481 135 76 2 1 134 408 540 2.06e-26 104
MsG0780039243.01.T02 AT3G43810 35.714 140 89 1 2 140 17 156 4.05e-22 88.6
MsG0780039243.01.T02 AT3G22930 36.923 130 81 1 2 130 40 169 5.62e-22 87.4
MsG0780039243.01.T02 AT2G27030 36.154 130 82 1 2 130 17 146 6.85e-21 84.7
MsG0780039243.01.T02 AT3G56800 36.154 130 82 1 2 130 17 146 7.18e-21 84.0
MsG0780039243.01.T02 AT3G43810 36.154 130 82 1 2 130 17 146 7.18e-21 84.0
MsG0780039243.01.T02 AT2G27030 36.154 130 82 1 2 130 17 146 7.18e-21 84.0
MsG0780039243.01.T02 AT2G41110 36.154 130 82 1 2 130 17 146 7.18e-21 84.0
MsG0780039243.01.T02 AT5G21274 36.154 130 82 1 2 130 17 146 7.25e-21 84.0
MsG0780039243.01.T02 AT5G37780 37.121 132 78 2 2 130 17 146 1.01e-20 83.6
MsG0780039243.01.T02 AT1G66410 37.121 132 78 2 2 130 17 146 1.01e-20 83.6
MsG0780039243.01.T02 AT4G21940 49.398 83 42 0 1 83 410 492 3.10e-20 87.0
MsG0780039243.01.T02 AT4G14640 34.615 130 84 1 2 130 18 147 6.84e-20 81.3
MsG0780039243.01.T02 AT2G17890 33.571 140 80 4 2 134 420 553 1.29e-19 85.1
MsG0780039243.01.T02 AT1G50700 44.578 83 46 0 1 83 382 464 3.98e-19 83.6
MsG0780039243.01.T02 AT5G66210 35.915 142 74 5 2 134 374 507 1.04e-18 82.4
MsG0780039243.01.T02 AT5G66210 35.915 142 74 5 2 134 374 507 1.04e-18 82.4
MsG0780039243.01.T02 AT5G37780 36.585 123 73 2 11 130 13 133 1.12e-18 77.8
MsG0780039243.01.T02 AT2G41110 35.537 121 77 1 11 130 38 158 2.31e-18 77.8
MsG0780039243.01.T02 AT5G37780 36.585 123 73 2 11 130 41 161 2.61e-18 77.4
MsG0780039243.01.T02 AT1G66410 36.585 123 73 2 11 130 36 156 2.74e-18 77.4
MsG0780039243.01.T02 AT5G37780 36.585 123 73 2 11 130 52 172 3.85e-18 77.4
MsG0780039243.01.T02 AT4G14640 33.884 121 79 1 11 130 9 129 4.84e-18 76.3
MsG0780039243.01.T02 AT1G76040 44.048 84 47 0 2 85 421 504 5.42e-18 80.5
MsG0780039243.01.T02 AT1G18530 30.714 140 93 2 1 136 11 150 2.15e-17 75.1
MsG0780039243.01.T02 AT3G43810 38.235 102 62 1 30 130 9 110 6.69e-17 72.4
MsG0780039243.01.T02 AT3G43810 38.235 102 62 1 30 130 9 110 6.69e-17 72.4
MsG0780039243.01.T02 AT1G66410 39.423 104 58 2 30 130 9 110 8.47e-17 72.4
MsG0780039243.01.T02 AT1G66410 39.423 104 58 2 30 130 9 110 8.47e-17 72.4
MsG0780039243.01.T02 AT3G50360 32.576 132 86 3 2 131 32 162 1.50e-16 73.2
MsG0780039243.01.T02 AT1G24620 37.681 138 79 5 1 134 41 175 7.47e-16 71.6
MsG0780039243.01.T02 AT4G36070 30.000 140 85 4 2 134 383 516 1.46e-15 73.6
MsG0780039243.01.T02 AT4G36070 30.000 140 85 4 2 134 383 516 1.49e-15 73.6
MsG0780039243.01.T02 AT3G59440 29.630 135 93 1 1 133 55 189 2.43e-15 70.5
MsG0780039243.01.T02 AT1G76640 33.813 139 79 3 1 131 26 159 3.51e-15 69.3
MsG0780039243.01.T02 AT4G03290 31.655 139 89 2 1 133 9 147 4.39e-15 68.9
MsG0780039243.01.T02 AT1G05990 31.206 141 85 3 1 133 9 145 6.90e-15 68.2
MsG0780039243.01.T02 AT3G51850 68.627 51 16 0 1 51 363 413 1.26e-14 70.9
MsG0780039243.01.T02 AT2G43290 31.915 141 88 3 1 133 69 209 1.45e-14 68.9
MsG0780039243.01.T02 AT3G25600 28.571 140 96 2 1 136 16 155 1.13e-13 65.5
MsG0780039243.01.T02 AT5G66210 37.624 101 52 3 2 93 374 472 1.18e-13 68.2
MsG0780039243.01.T02 AT1G62820 31.538 130 86 2 2 130 18 145 1.47e-13 64.7
MsG0780039243.01.T02 AT5G37770 31.159 138 90 2 1 133 21 158 1.76e-13 64.7
MsG0780039243.01.T02 AT5G37770 31.159 138 90 2 1 133 21 158 1.76e-13 64.7
MsG0780039243.01.T02 AT4G37010 29.545 132 92 1 1 131 31 162 1.78e-13 65.1
MsG0780039243.01.T02 AT4G37010 29.545 132 92 1 1 131 35 166 1.98e-13 65.1
MsG0780039243.01.T02 AT3G10190 32.824 131 86 2 2 130 75 205 2.34e-13 65.5
MsG0780039243.01.T02 AT5G66210 37.374 99 51 3 2 91 374 470 2.37e-13 67.0
MsG0780039243.01.T02 AT2G41100 29.932 147 85 2 2 130 71 217 4.25e-13 65.9
MsG0780039243.01.T02 AT2G41100 29.932 147 85 2 2 130 71 217 4.25e-13 65.9
MsG0780039243.01.T02 AT2G41100 29.932 147 85 2 2 130 71 217 4.25e-13 65.9
MsG0780039243.01.T02 AT2G41100 26.708 161 101 2 2 145 17 177 4.42e-13 65.9
MsG0780039243.01.T02 AT2G41100 29.932 147 85 2 2 130 106 252 4.69e-13 65.9
MsG0780039243.01.T02 AT2G41100 26.708 161 101 2 2 145 17 177 4.42e-13 65.9
MsG0780039243.01.T02 AT2G41100 29.932 147 85 2 2 130 106 252 4.69e-13 65.9
MsG0780039243.01.T02 AT4G14640 34.409 93 60 1 2 93 18 110 7.84e-13 62.0
MsG0780039243.01.T02 AT1G12310 30.000 130 88 2 2 130 18 145 8.44e-13 62.8
MsG0780039243.01.T02 AT4G12860 31.429 140 85 3 1 133 9 144 9.33e-13 62.8
MsG0780039243.01.T02 AT2G15680 31.343 134 87 2 1 132 54 184 1.04e-12 63.2
MsG0780039243.01.T02 AT3G22930 36.667 90 56 1 2 90 40 129 1.22e-12 62.0
MsG0780039243.01.T02 AT3G03000 28.676 136 95 1 1 134 24 159 3.77e-12 61.2
MsG0780039243.01.T02 AT1G76650 31.111 135 85 2 1 131 47 177 3.85e-12 61.6
MsG0780039243.01.T02 AT1G76650 31.111 135 85 2 1 131 47 177 3.85e-12 61.6
MsG0780039243.01.T02 AT1G18210 29.851 134 83 3 1 130 27 153 8.97e-12 60.5
MsG0780039243.01.T02 AT1G18210 29.851 134 83 3 1 130 27 153 8.97e-12 60.5
MsG0780039243.01.T02 AT1G66400 30.075 133 90 1 1 130 19 151 1.02e-11 60.1
MsG0780039243.01.T02 AT1G64480 34.043 141 73 7 1 126 42 177 1.04e-11 60.8
MsG0780039243.01.T02 AT1G32250 26.950 141 96 2 1 134 20 160 1.53e-11 59.7
MsG0780039243.01.T02 AT1G64480 34.043 141 73 7 1 126 42 177 1.58e-11 60.5
MsG0780039243.01.T02 AT1G64480 34.043 141 73 7 1 126 42 177 1.58e-11 60.5
MsG0780039243.01.T02 AT1G64480 34.043 141 73 7 1 126 42 177 1.58e-11 60.5
MsG0780039243.01.T02 AT2G41100 31.933 119 63 2 30 130 9 127 4.80e-11 58.9
MsG0780039243.01.T02 AT2G41090 32.576 132 81 3 2 130 17 143 8.45e-11 58.2
MsG0780039243.01.T02 AT1G73630 27.206 136 88 3 1 132 24 152 9.00e-11 57.8

Find 49 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTACTCTACTAATATTT+TGG 0.160788 7:-60561898 MsG0780039243.01.T02:three_prime_UTR
GGCTTCTTTGTGATGATATT+TGG 0.171226 7:-60562191 MsG0780039243.01.T01:three_prime_UTR
AACAAAGGGTGTGTATATTT+TGG 0.220052 7:+60562109 None:intergenic
ATGTACTTGTTCTTGAACTA+TGG 0.229289 7:-60561803 MsG0780039243.01.T02:three_prime_UTR
AGAAGCCAAGTCCAGGATTT+AGG 0.243770 7:+60562207 None:intergenic
TAACATCCACCCTTCTCTTC+TGG 0.265132 7:-60562027 MsG0780039243.01.T01:three_prime_UTR
CAAGAACAAGTACATCTTAC+AGG 0.345262 7:+60561811 None:intergenic
TCCACCCTTCTCTTCTGGTT+TGG 0.353677 7:-60562022 MsG0780039243.01.T01:three_prime_UTR
TATTTGGTTCCTCGTTAGAT+AGG 0.370220 7:-60562175 MsG0780039243.01.T01:three_prime_UTR
AAAGATGGTTCTTTAAACTT+AGG 0.374121 7:-60562294 MsG0780039243.01.T01:CDS
TTGTATTCTGTACTCAGATT+TGG 0.376613 7:-60561934 MsG0780039243.01.T01:three_prime_UTR
TTTGTGGCTATGATGAAAAC+TGG 0.410674 7:-60562387 MsG0780039243.01.T01:CDS
AGGGTGGATGTTAAAATGAT+TGG 0.432748 7:+60562037 None:intergenic
AGCTTAAAGTTAATGAAAGA+TGG 0.438081 7:-60562309 MsG0780039243.01.T01:CDS
AATCAGCTATGATGAATTTG+TGG 0.443183 7:-60562403 MsG0780039243.01.T01:CDS
TTCGTGACTCAGACAACAAC+AGG 0.452191 7:+60562143 None:intergenic
TGGAATACACAGCCATTCTC+TGG 0.460129 7:+60561875 None:intergenic
TAAACATCAATAAGATATCA+TGG 0.470983 7:+60561855 None:intergenic
GTAATAGTCCTCCTAAATCC+TGG 0.492282 7:-60562218 MsG0780039243.01.T01:three_prime_UTR
ATTTGGTTCCTCGTTAGATA+GGG 0.501707 7:-60562174 MsG0780039243.01.T01:three_prime_UTR
TGATGAAAACTGGAACGGAT+TGG 0.508931 7:-60562377 MsG0780039243.01.T01:CDS
GTCCTCCTAAATCCTGGACT+TGG 0.511360 7:-60562212 MsG0780039243.01.T01:three_prime_UTR
AACTGGAACGGATTGGAGAA+AGG 0.523785 7:-60562370 MsG0780039243.01.T01:CDS
AAATATTAGTAGAGTAGGAT+AGG 0.526709 7:+60561901 None:intergenic
ATCACAAAGAAGCCAAGTCC+AGG 0.527902 7:+60562200 None:intergenic
AGGAGGACTATTACACTATG+TGG 0.534144 7:+60562227 None:intergenic
CATTGCCAAACCAGAAGAGA+AGG 0.551746 7:+60562017 None:intergenic
ATCTTATTGATGTTTACTGT+AGG 0.556762 7:-60561848 MsG0780039243.01.T02:three_prime_UTR
GTTGTCTGAGTCACGAAGGA+AGG 0.557117 7:-60562137 MsG0780039243.01.T01:three_prime_UTR
GGCCAAAATATTAGTAGAGT+AGG 0.567214 7:+60561896 None:intergenic
AACACGGTGCCTTGAGCCAA+TGG 0.586847 7:-60562076 MsG0780039243.01.T01:intron
TGTTTCACACAAGTAACAAA+GGG 0.587965 7:+60562095 None:intergenic
CTCAGACAACAACAGGTGAA+AGG 0.589929 7:+60562150 None:intergenic
AATCATACATGTCACACCAT+TGG 0.594904 7:+60562060 None:intergenic
GCAGTCTGATTGTTTATCCG+AGG 0.605363 7:-60561974 MsG0780039243.01.T01:three_prime_UTR
ATTGAATATAAGCAAACACT+TGG 0.605719 7:+60562258 None:intergenic
CATGTCACACCATTGGCTCA+AGG 0.609306 7:+60562067 None:intergenic
AGCCAAGTCCAGGATTTAGG+AGG 0.615105 7:+60562210 None:intergenic
TTGTCTGAGTCACGAAGGAA+GGG 0.623219 7:-60562136 MsG0780039243.01.T01:three_prime_UTR
GTGTTTCACACAAGTAACAA+AGG 0.628224 7:+60562094 None:intergenic
ACTACAAGATATTCACACCT+CGG 0.648369 7:+60561957 None:intergenic
ATTGCCAAACCAGAAGAGAA+GGG 0.659406 7:+60562018 None:intergenic
GGCTATGATGAAAACTGGAA+CGG 0.659519 7:-60562382 MsG0780039243.01.T01:CDS
GCTTCTCGACATTACTCACG+TGG 0.659695 7:-60562348 MsG0780039243.01.T01:CDS
TTTGTTACTTGTGTGAAACA+CGG 0.663832 7:-60562092 MsG0780039243.01.T01:intron
GCCAAACCAGAAGAGAAGGG+TGG 0.693374 7:+60562021 None:intergenic
TGTTGTTGTCTGAGTCACGA+AGG 0.713557 7:-60562141 MsG0780039243.01.T01:three_prime_UTR
TGAAAGGACCCTATCTAACG+AGG 0.734669 7:+60562166 None:intergenic
CTTCTCGACATTACTCACGT+GGG 0.738829 7:-60562347 MsG0780039243.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAACTTAAGAACAATTTA+CGG + Chr7:60562084-60562103 None:intergenic 20.0%
!! ATTATATGAAAACAGATCAT+AGG + Chr7:60562017-60562036 None:intergenic 20.0%
!! TAAACATCAATAAGATATCA+TGG + Chr7:60563007-60563026 None:intergenic 20.0%
! AAAGATGGTTCTTTAAACTT+AGG - Chr7:60562565-60562584 MsG0780039243.01.T01:CDS 25.0%
! AAATATTAGTAGAGTAGGAT+AGG + Chr7:60562961-60562980 None:intergenic 25.0%
! ACAATAAGCTAGAAGAAAAA+GGG + Chr7:60561900-60561919 None:intergenic 25.0%
! AGCTTAAAGTTAATGAAAGA+TGG - Chr7:60562550-60562569 MsG0780039243.01.T01:CDS 25.0%
! AGTTGTTCAAGAATTTAAGA+TGG + Chr7:60562424-60562443 None:intergenic 25.0%
! ATCTTATTGATGTTTACTGT+AGG - Chr7:60563011-60563030 MsG0780039243.01.T01:CDS 25.0%
! ATTGAATATAAGCAAACACT+TGG + Chr7:60562604-60562623 None:intergenic 25.0%
! TTAAATTCTTGAACAACTAC+AGG - Chr7:60562426-60562445 MsG0780039243.01.T01:intron 25.0%
!! ATCCTACTCTACTAATATTT+TGG - Chr7:60562961-60562980 MsG0780039243.01.T01:intron 25.0%
!! TTTTTCTTTACATGTAGTCA+TGG - Chr7:60562385-60562404 MsG0780039243.01.T01:CDS 25.0%
AACAAAACTTGAAAGAGAAC+CGG + Chr7:60561985-60562004 None:intergenic 30.0%
AATCAGCTATGATGAATTTG+TGG - Chr7:60562456-60562475 MsG0780039243.01.T01:intron 30.0%
ACTTAAGAACAATTTACGGT+TGG + Chr7:60562080-60562099 None:intergenic 30.0%
ATGAAAACAGATCATAGGAA+AGG + Chr7:60562012-60562031 None:intergenic 30.0%
ATGTACTTGTTCTTGAACTA+TGG - Chr7:60563056-60563075 MsG0780039243.01.T01:CDS 30.0%
CACAATAAGCTAGAAGAAAA+AGG + Chr7:60561901-60561920 None:intergenic 30.0%
CAGGTAGATAATAATGGTAA+GGG - Chr7:60562136-60562155 MsG0780039243.01.T01:three_prime_UTR 30.0%
CCATTTCCCTTCATTTAAAA+AGG - Chr7:60562185-60562204 MsG0780039243.01.T01:three_prime_UTR 30.0%
TAAACTTACCACTTGTAACT+GGG - Chr7:60561923-60561942 MsG0780039243.01.T01:three_prime_UTR 30.0%
TCAGGTAGATAATAATGGTA+AGG - Chr7:60562135-60562154 MsG0780039243.01.T01:three_prime_UTR 30.0%
TCCATTGAAGAACTAAAAGT+TGG - Chr7:60561798-60561817 MsG0780039243.01.T02:three_prime_UTR 30.0%
TGACATCAGGTAGATAATAA+TGG - Chr7:60562130-60562149 MsG0780039243.01.T01:three_prime_UTR 30.0%
TGTTTCACACAAGTAACAAA+GGG + Chr7:60562767-60562786 None:intergenic 30.0%
TTCCCTTCATTTAAAAAGGA+TGG - Chr7:60562189-60562208 MsG0780039243.01.T01:three_prime_UTR 30.0%
TTGTATTCTGTACTCAGATT+TGG - Chr7:60562925-60562944 MsG0780039243.01.T01:intron 30.0%
TTTACATGTAGTCATGGTTA+AGG - Chr7:60562391-60562410 MsG0780039243.01.T01:CDS 30.0%
! AAGATGGATACTGATAATGA+TGG - Chr7:60561768-60561787 MsG0780039243.01.T02:three_prime_UTR 30.0%
! CCTTTTTAAATGAAGGGAAA+TGG + Chr7:60562188-60562207 None:intergenic 30.0%
! TGCCATCCTTTTTAAATGAA+GGG + Chr7:60562194-60562213 None:intergenic 30.0%
! TTGCCATCCTTTTTAAATGA+AGG + Chr7:60562195-60562214 None:intergenic 30.0%
! TTTGTTACTTGTGTGAAACA+CGG - Chr7:60562767-60562786 MsG0780039243.01.T01:intron 30.0%
! TTTTCAAACCATTGTGTGAA+TGG - Chr7:60562036-60562055 MsG0780039243.01.T01:three_prime_UTR 30.0%
!! AACAAAGGGTGTGTATATTT+TGG + Chr7:60562753-60562772 None:intergenic 30.0%
!!! TCCAACTTTTAGTTCTTCAA+TGG + Chr7:60561802-60561821 None:intergenic 30.0%
AATCATACATGTCACACCAT+TGG + Chr7:60562802-60562821 None:intergenic 35.0%
ACTACAAGATATTCACACCT+CGG + Chr7:60562905-60562924 None:intergenic 35.0%
AGGGTGGATGTTAAAATGAT+TGG + Chr7:60562825-60562844 None:intergenic 35.0%
ATATTGAACCAGAAGAGCTA+CGG - Chr7:60562269-60562288 MsG0780039243.01.T01:exon 35.0%
ATTCTTGAACAACTACAGGA+TGG - Chr7:60562430-60562449 MsG0780039243.01.T01:intron 35.0%
CAAGAACAAGTACATCTTAC+AGG + Chr7:60563051-60563070 None:intergenic 35.0%
CTAAACTTACCACTTGTAAC+TGG - Chr7:60561922-60561941 MsG0780039243.01.T01:three_prime_UTR 35.0%
GGCCAAAATATTAGTAGAGT+AGG + Chr7:60562966-60562985 None:intergenic 35.0%
GGCTTCTTTGTGATGATATT+TGG - Chr7:60562668-60562687 MsG0780039243.01.T01:CDS 35.0%
GTCGAATCATTCTAATACGA+AGG - Chr7:60561954-60561973 MsG0780039243.01.T01:three_prime_UTR 35.0%
GTGTTTCACACAAGTAACAA+AGG + Chr7:60562768-60562787 None:intergenic 35.0%
GTTTATTGAAGCTGTGAGTA+TGG - Chr7:60561866-60561885 MsG0780039243.01.T02:three_prime_UTR 35.0%
TTTCAGTACCATTCACACAA+TGG + Chr7:60562047-60562066 None:intergenic 35.0%
TTTGTGGCTATGATGAAAAC+TGG - Chr7:60562472-60562491 MsG0780039243.01.T01:intron 35.0%
! ATTTGGTTCCTCGTTAGATA+GGG - Chr7:60562685-60562704 MsG0780039243.01.T01:CDS 35.0%
! GATCATTGTTTGTTGACATC+AGG - Chr7:60562117-60562136 MsG0780039243.01.T01:three_prime_UTR 35.0%
! TATTTGGTTCCTCGTTAGAT+AGG - Chr7:60562684-60562703 MsG0780039243.01.T01:CDS 35.0%
! TTCTAATACGAAGGCTTTTC+CGG - Chr7:60561963-60561982 MsG0780039243.01.T01:three_prime_UTR 35.0%
!!! CTAATATTTTGGCCAGAGAA+TGG - Chr7:60562972-60562991 MsG0780039243.01.T01:intron 35.0%
!!! TTCTCCTATTTTGACAAGGA+CGG - Chr7:60562238-60562257 MsG0780039243.01.T01:three_prime_UTR 35.0%
AAATGACGAGCATCTTCACA+AGG - Chr7:60562213-60562232 MsG0780039243.01.T01:three_prime_UTR 40.0%
AGGAGGACTATTACACTATG+TGG + Chr7:60562635-60562654 None:intergenic 40.0%
ATCAGTTCCATCTTCCATCA+AGG + Chr7:60562299-60562318 None:intergenic 40.0%
ATTCCCGTCCTTGTCAAAAT+AGG + Chr7:60562245-60562264 None:intergenic 40.0%
ATTGCCAAACCAGAAGAGAA+GGG + Chr7:60562844-60562863 None:intergenic 40.0%
GGCTATGATGAAAACTGGAA+CGG - Chr7:60562477-60562496 MsG0780039243.01.T01:intron 40.0%
GGTAAGGGAACACTAGATTA+CGG - Chr7:60562151-60562170 MsG0780039243.01.T01:three_prime_UTR 40.0%
GTAATAGTCCTCCTAAATCC+TGG - Chr7:60562641-60562660 MsG0780039243.01.T01:CDS 40.0%
GTCCTTGTCAAAATAGGAGA+AGG + Chr7:60562239-60562258 None:intergenic 40.0%
TGATGAAAACTGGAACGGAT+TGG - Chr7:60562482-60562501 MsG0780039243.01.T01:intron 40.0%
! CAAGTTGAGACTGATGGTTT+CGG + Chr7:60561827-60561846 None:intergenic 40.0%
!!! TATTTTGACAAGGACGGGAA+TGG - Chr7:60562244-60562263 MsG0780039243.01.T01:three_prime_UTR 40.0%
!!! TCTCCTATTTTGACAAGGAC+GGG - Chr7:60562239-60562258 MsG0780039243.01.T01:three_prime_UTR 40.0%
AGAACAAGCCCAGTTACAAG+TGG + Chr7:60561934-60561953 None:intergenic 45.0%
AGAAGCCAAGTCCAGGATTT+AGG + Chr7:60562655-60562674 None:intergenic 45.0%
ATCACAAAGAAGCCAAGTCC+AGG + Chr7:60562662-60562681 None:intergenic 45.0%
CATTGCCAAACCAGAAGAGA+AGG + Chr7:60562845-60562864 None:intergenic 45.0%
CCAAGAAGTAGACACAGACA+AGG - Chr7:60562348-60562367 MsG0780039243.01.T01:CDS 45.0%
CCTTGTCTGTGTCTACTTCT+TGG + Chr7:60562351-60562370 None:intergenic 45.0%
CTCAGACAACAACAGGTGAA+AGG + Chr7:60562712-60562731 None:intergenic 45.0%
CTTCTCGACATTACTCACGT+GGG - Chr7:60562512-60562531 MsG0780039243.01.T01:CDS 45.0%
GCAGTCTGATTGTTTATCCG+AGG - Chr7:60562885-60562904 MsG0780039243.01.T01:intron 45.0%
TAACATCCACCCTTCTCTTC+TGG - Chr7:60562832-60562851 MsG0780039243.01.T01:intron 45.0%
TGAAAGGACCCTATCTAACG+AGG + Chr7:60562696-60562715 None:intergenic 45.0%
TGGAATACACAGCCATTCTC+TGG + Chr7:60562987-60563006 None:intergenic 45.0%
TGTTGTTGTCTGAGTCACGA+AGG - Chr7:60562718-60562737 MsG0780039243.01.T01:CDS 45.0%
TTCGTGACTCAGACAACAAC+AGG + Chr7:60562719-60562738 None:intergenic 45.0%
TTGTCTGAGTCACGAAGGAA+GGG - Chr7:60562723-60562742 MsG0780039243.01.T01:CDS 45.0%
! ACTCAGCAAGTTGAGACTGA+TGG + Chr7:60561833-60561852 None:intergenic 45.0%
!! AACTGGAACGGATTGGAGAA+AGG - Chr7:60562489-60562508 MsG0780039243.01.T01:intron 45.0%
!!! GGCCTTCTCCTATTTTGACA+AGG - Chr7:60562234-60562253 MsG0780039243.01.T01:three_prime_UTR 45.0%
AGAGCTACGGAATGCCTTGA+TGG - Chr7:60562282-60562301 MsG0780039243.01.T01:exon 50.0%
AGCCAAGTCCAGGATTTAGG+AGG + Chr7:60562652-60562671 None:intergenic 50.0%
CGGAATGCCTTGATGGAAGA+TGG - Chr7:60562289-60562308 MsG0780039243.01.T01:CDS 50.0%
GCTTCTCGACATTACTCACG+TGG - Chr7:60562511-60562530 MsG0780039243.01.T01:intron 50.0%
GTCCTCCTAAATCCTGGACT+TGG - Chr7:60562647-60562666 MsG0780039243.01.T01:CDS 50.0%
GTTGTCTGAGTCACGAAGGA+AGG - Chr7:60562722-60562741 MsG0780039243.01.T01:CDS 50.0%
! AAGGCATTCCGTAGCTCTTC+TGG + Chr7:60562280-60562299 None:intergenic 50.0%
! TCCACCCTTCTCTTCTGGTT+TGG - Chr7:60562837-60562856 MsG0780039243.01.T01:intron 50.0%
!! CATGTCACACCATTGGCTCA+AGG + Chr7:60562795-60562814 None:intergenic 50.0%
AACACGGTGCCTTGAGCCAA+TGG - Chr7:60562783-60562802 MsG0780039243.01.T01:intron 55.0%
GCCAAACCAGAAGAGAAGGG+TGG + Chr7:60562841-60562860 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr7 gene 60561759 60563122 60561759 ID=MsG0780039243.01;Name=MsG0780039243.01
Chr7 mRNA 60561899 60563122 60561899 ID=MsG0780039243.01.T01;Parent=MsG0780039243.01;Name=MsG0780039243.01.T01;_AED=0.45;_eAED=0.47;_QI=0|0.6|0.66|1|0.8|0.5|6|360|166
Chr7 exon 60561899 60562067 60561899 ID=MsG0780039243.01.T01:exon:8461;Parent=MsG0780039243.01.T01
Chr7 exon 60562093 60562433 60562093 ID=MsG0780039243.01.T01:exon:8460;Parent=MsG0780039243.01.T01
Chr7 CDS 60563003 60563122 60563003 ID=MsG0780039243.01.T01:cds;Parent=MsG0780039243.01.T01
Chr7 CDS 60562512 60562742 60562512 ID=MsG0780039243.01.T01:cds;Parent=MsG0780039243.01.T01
Chr7 CDS 60562284 60562433 60562284 ID=MsG0780039243.01.T01:cds;Parent=MsG0780039243.01.T01
Chr7 three_prime_UTR 60562093 60562283 60562093 ID=MsG0780039243.01.T01:three_prime_utr;Parent=MsG0780039243.01.T01
Chr7 three_prime_UTR 60561899 60562067 60561899 ID=MsG0780039243.01.T01:three_prime_utr;Parent=MsG0780039243.01.T01
Chr7 mRNA 60561759 60563122 60561759 ID=MsG0780039243.01.T02;Parent=MsG0780039243.01;Name=MsG0780039243.01.T02;_AED=0.43;_eAED=0.45;_QI=0|0.5|0.6|1|1|0.8|5|525|166
Chr7 exon 60561759 60562433 60561759 ID=MsG0780039243.01.T02:exon:8462;Parent=MsG0780039243.01.T02
Chr7 CDS 60563003 60563122 60563003 ID=MsG0780039243.01.T02:cds;Parent=MsG0780039243.01.T02
Chr7 CDS 60562512 60562742 60562512 ID=MsG0780039243.01.T02:cds;Parent=MsG0780039243.01.T02
Chr7 CDS 60562284 60562433 60562284 ID=MsG0780039243.01.T02:cds;Parent=MsG0780039243.01.T02
Chr7 three_prime_UTR 60561759 60562283 60561759 ID=MsG0780039243.01.T02:three_prime_utr;Parent=MsG0780039243.01.T02
Gene Sequence

>MsG0780039243.01.T01

ATGTTCAAGAAGATGGATACTGATAATGATGGTATTGTTTCCATTGAAGAACTAAAAGTTGGATTCCGAAACCATCAGTCTCAACTTGCTGAGTCTGAAGTTCAGATGTTTATTGAAGCTGTAGATAATAATGGTAAGGGAACACTAGATTACGGAGAATTTGTTGCCATTTCCCTTCATTTAAAAAGGATGGCAAATGACGAGCATCTTCACAAGGCCTTCTCCTATTTTGACAAGGACGGGAATGGATATATTGAACCAGAAGAGCTACGGAATGCCTTGATGGAAGATGGAACTGATGACTGTACAGATGTAGCAAATGATATTTTCCAAGAAGTAGACACAGACAAGGATGGAAAAATCAGCTATGATGAATTTGTGGCTATGATGAAAACTGGAACGGATTGGAGAAAGGCTTCTCGACATTACTCACGTGGGAGATTCAATAGCTTGAGCTTAAAGTTAATGAAAGATGGTTCTTTAAACTTAGGAAATGAGTAG

>MsG0780039243.01.T02

ATGTTCAAGAAGATGGATACTGATAATGATGGTATTGTTTCCATTGAAGAACTAAAAGTTGGATTCCGAAACCATCAGTCTCAACTTGCTGAGTCTGAAGTTCAGATGTTTATTGAAGCTGTAGATAATAATGGTAAGGGAACACTAGATTACGGAGAATTTGTTGCCATTTCCCTTCATTTAAAAAGGATGGCAAATGACGAGCATCTTCACAAGGCCTTCTCCTATTTTGACAAGGACGGGAATGGATATATTGAACCAGAAGAGCTACGGAATGCCTTGATGGAAGATGGAACTGATGACTGTACAGATGTAGCAAATGATATTTTCCAAGAAGTAGACACAGACAAGGATGGAAAAATCAGCTATGATGAATTTGTGGCTATGATGAAAACTGGAACGGATTGGAGAAAGGCTTCTCGACATTACTCACGTGGGAGATTCAATAGCTTGAGCTTAAAGTTAATGAAAGATGGTTCTTTAAACTTAGGAAATGAGTAG

Protein sequence

>MsG0780039243.01.T01

MFKKMDTDNDGIVSIEELKVGFRNHQSQLAESEVQMFIEAVDNNGKGTLDYGEFVAISLHLKRMANDEHLHKAFSYFDKDGNGYIEPEELRNALMEDGTDDCTDVANDIFQEVDTDKDGKISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGNE*

>MsG0780039243.01.T02

MFKKMDTDNDGIVSIEELKVGFRNHQSQLAESEVQMFIEAVDNNGKGTLDYGEFVAISLHLKRMANDEHLHKAFSYFDKDGNGYIEPEELRNALMEDGTDDCTDVANDIFQEVDTDKDGKISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGNE*