AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011203.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011203.01.T01 MTR_2g099950 98.428 509 8 0 1 509 64 572 0.0 1041
MsG0280011203.01.T01 MTR_2g099950 98.428 509 8 0 1 509 1 509 0.0 1041
MsG0280011203.01.T01 MTR_8g017410 79.256 511 102 2 1 509 67 575 0.0 853
MsG0280011203.01.T01 MTR_8g017410 79.256 511 102 2 1 509 21 529 0.0 852
MsG0280011203.01.T01 MTR_5g066380 65.517 522 165 9 1 509 55 574 0.0 706
MsG0280011203.01.T01 MTR_1g059700 56.505 515 212 7 1 509 60 568 0.0 588
MsG0280011203.01.T01 MTR_7g105050 56.164 511 217 5 1 508 67 573 0.0 584
MsG0280011203.01.T01 MTR_1g015910 54.207 511 227 4 1 508 65 571 0.0 569
MsG0280011203.01.T01 MTR_1g015910 54.207 511 227 4 1 508 22 528 0.0 569
MsG0280011203.01.T01 MTR_8g017410 75.775 355 82 2 1 353 67 419 0.0 567
MsG0280011203.01.T01 MTR_1g015970 52.446 511 236 4 1 508 39 545 0.0 555
MsG0280011203.01.T01 MTR_1g015980 48.456 518 252 9 1 508 39 551 1.07e-173 501
MsG0280011203.01.T01 MTR_4g101630 46.979 513 258 8 1 508 19 522 7.25e-152 444
MsG0280011203.01.T01 MTR_4g101630 46.979 513 258 8 1 508 131 634 6.70e-150 443
MsG0280011203.01.T01 MTR_3g008530 45.257 506 266 7 5 508 127 623 1.21e-144 429
MsG0280011203.01.T01 MTR_1g015940 46.622 444 207 5 11 451 54 470 7.00e-140 412
MsG0280011203.01.T01 MTR_1g015920 31.731 104 66 2 189 288 4 106 7.25e-13 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011203.01.T01 AT3G13790 65.571 517 167 6 1 509 1 514 0.0 691
MsG0280011203.01.T01 AT3G13790 65.571 517 167 6 1 509 1 514 0.0 691
MsG0280011203.01.T01 AT3G13790 65.571 517 167 6 1 509 1 514 0.0 691
MsG0280011203.01.T01 AT3G13790 65.571 517 167 6 1 509 68 581 0.0 691
MsG0280011203.01.T01 AT3G13790 65.571 517 167 6 1 509 71 584 0.0 690
MsG0280011203.01.T01 AT1G55120 59.345 519 199 6 1 509 19 535 0.0 637
MsG0280011203.01.T01 AT1G55120 59.345 519 199 6 1 509 58 574 0.0 636
MsG0280011203.01.T01 AT1G55120 59.345 519 199 6 1 509 18 534 0.0 636
MsG0280011203.01.T01 AT1G55120 59.345 519 199 6 1 509 43 559 0.0 635
MsG0280011203.01.T01 AT3G13784 57.282 515 206 8 1 506 9 518 0.0 601
MsG0280011203.01.T01 AT3G13784 57.282 515 206 8 1 506 62 571 0.0 600
MsG0280011203.01.T01 AT3G13784 57.282 515 206 8 1 506 62 571 0.0 600
MsG0280011203.01.T01 AT3G13784 57.282 515 206 8 1 506 59 568 0.0 600
MsG0280011203.01.T01 AT3G52600 55.019 518 217 6 1 505 67 581 0.0 558
MsG0280011203.01.T01 AT3G52600 55.019 518 217 6 1 505 1 515 0.0 557
MsG0280011203.01.T01 AT3G52600 55.019 518 217 6 1 505 13 527 0.0 557
MsG0280011203.01.T01 AT2G36190 54.175 515 221 5 3 505 71 582 0.0 547
MsG0280011203.01.T01 AT5G11920 49.031 516 250 8 1 509 1 510 6.49e-167 482
MsG0280011203.01.T01 AT5G11920 49.031 516 250 8 1 509 36 545 3.04e-166 482
MsG0280011203.01.T01 AT1G62660 46.615 517 262 10 1 509 27 537 8.38e-149 437
MsG0280011203.01.T01 AT1G62660 46.615 517 262 10 1 509 125 635 1.28e-147 437
MsG0280011203.01.T01 AT1G12240 44.061 522 269 10 1 509 140 651 3.89e-142 424
MsG0280011203.01.T01 AT1G62660 45.455 473 244 10 45 509 3 469 4.76e-128 382
MsG0280011203.01.T01 AT1G62660 45.455 473 244 10 45 509 3 469 4.76e-128 382
MsG0280011203.01.T01 AT5G11920 50.562 356 164 7 1 350 36 385 9.32e-115 346

Find 143 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCTCTTCTCTCTCATTTA+TGG 0.118372 2:-80911201 MsG0280011203.01.T01:five_prime_UTR
AAATAAATGCAAGTTCATTT+AGG 0.163015 2:-80910041 MsG0280011203.01.T01:CDS
TCATTTGAAGTGAAAGATTT+TGG 0.181984 2:-80908750 MsG0280011203.01.T01:CDS
AAGAGAGTTAGCAATAAAAT+TGG 0.204427 2:+80911216 None:intergenic
TTGTTATATGCTTTCAATAA+TGG 0.210493 2:-80907818 MsG0280011203.01.T01:CDS
CAGATATCAACATAAGAATT+TGG 0.218589 2:-80908577 MsG0280011203.01.T01:CDS
AATTAGTATCACTACTTCTT+AGG 0.265234 2:+80907730 None:intergenic
CAATCCAAAAGGTGCTGTTT+GGG 0.272533 2:-80910343 MsG0280011203.01.T01:CDS
ACTGAATTAACACCAGTAAT+TGG 0.279878 2:+80909030 None:intergenic
GGGTATTGGAGGGTATTAAT+TGG 0.290155 2:-80909988 MsG0280011203.01.T01:CDS
ACCTTGGTTGGCCAATTGAC+TGG 0.299819 2:+80909075 None:intergenic
AATAAATGCAAGTTCATTTA+GGG 0.302444 2:-80910040 MsG0280011203.01.T01:CDS
AAACATGATCACTATTTGAT+TGG 0.304462 2:-80909742 MsG0280011203.01.T01:CDS
CATTCAGTGGTGGAGAGTTT+TGG 0.312021 2:-80907905 MsG0280011203.01.T01:CDS
ACATGTGCTTAAGGTTAGTT+TGG 0.312368 2:-80909773 MsG0280011203.01.T01:CDS
TTAGGGACCCAACAACTTCT+TGG 0.314057 2:-80910023 MsG0280011203.01.T01:CDS
AGACTATTCCAAGGGCTATC+TGG 0.320133 2:-80909164 MsG0280011203.01.T01:CDS
AGCTGAATGTAAAGGATGTT+TGG 0.327426 2:+80909897 None:intergenic
TTTCCCCAAACAGCACCTTT+TGG 0.327751 2:+80910339 None:intergenic
GGTGAATTGATTCCAATTAC+TGG 0.339584 2:-80909042 MsG0280011203.01.T01:CDS
CAAAAGGGTGCATCAGTAAA+AGG 0.341096 2:-80908678 MsG0280011203.01.T01:CDS
ACAATCCAAAAGGTGCTGTT+TGG 0.345736 2:-80910344 MsG0280011203.01.T01:CDS
TCTCAACCGTCAGATATAAA+AGG 0.347684 2:-80910246 MsG0280011203.01.T01:CDS
TGCTTATTATTGTTCACAAA+AGG 0.349820 2:+80907589 None:intergenic
GTATCAAGACCAATGGTTAA+TGG 0.350255 2:+80909820 None:intergenic
GCTATCTGGCTTCATAAATC+AGG 0.355554 2:-80909150 MsG0280011203.01.T01:CDS
TATCCATTTGTCCAATAATT+CGG 0.361523 2:+80908722 None:intergenic
GAGAATGATATGACCACATA+TGG 0.363306 2:-80908420 MsG0280011203.01.T01:CDS
AATGGATTCTTATTTAATAC+AGG 0.363548 2:+80909838 None:intergenic
AAGTGATAGGCAGTTCTATA+AGG 0.365296 2:+80911093 None:intergenic
TTGATGATGGGAAGAATAGA+AGG 0.368169 2:-80909612 MsG0280011203.01.T01:CDS
ACTTCCAACCTCTCAAGAAT+TGG 0.373141 2:-80911074 MsG0280011203.01.T01:five_prime_UTR
ATTCCAGTGTACAAAATTGC+TGG 0.375276 2:+80910183 None:intergenic
TTCCTAGCCAAGAAGTTGTT+GGG 0.375289 2:+80910016 None:intergenic
GGCTCAGCAACAATACTTCC+AGG 0.375946 2:-80910213 MsG0280011203.01.T01:CDS
AAAGGTGGTGTTGGACCATT+TGG 0.375969 2:-80908660 MsG0280011203.01.T01:CDS
TATCAAAGGATCTTGTGAAT+TGG 0.395856 2:-80910296 MsG0280011203.01.T01:CDS
GTGGTTTAATTGAATGAAGT+TGG 0.403508 2:+80911252 None:intergenic
CTGCACGTGCTTGCTTCTAA+AGG 0.407854 2:-80908636 MsG0280011203.01.T01:CDS
TGGAAGCAAAATACATAGAA+AGG 0.411550 2:-80909968 MsG0280011203.01.T01:CDS
CAAGATCCTTTGATACTGAA+TGG 0.413406 2:+80910304 None:intergenic
AGTAGTGATACTAATTAAAC+AGG 0.415338 2:-80907723 MsG0280011203.01.T01:three_prime_UTR
GATATAAAAGGTTGTTGGTC+AGG 0.418374 2:-80910234 MsG0280011203.01.T01:CDS
AACATGGTGGGTAGCTTCAA+TGG 0.424077 2:+80911164 None:intergenic
TTACATTCAGCTGAAGGAAC+AGG 0.425951 2:-80909886 MsG0280011203.01.T01:CDS
CCTCCCTTGATCACCTTGGT+TGG 0.427224 2:+80909063 None:intergenic
CCTTGGTTGGCCAATTGACT+GGG 0.427404 2:+80909076 None:intergenic
AGGCCGAATTATTGGACAAA+TGG 0.428825 2:-80908725 MsG0280011203.01.T01:CDS
AACATGATCACTATTTGATT+GGG 0.429903 2:-80909741 MsG0280011203.01.T01:CDS
GCAACAGTAGGTTCCATCAA+TGG 0.434493 2:+80910069 None:intergenic
TAGAAGGATCTTGTTGGGTT+GGG 0.438565 2:-80909596 MsG0280011203.01.T01:CDS
CTTGAGAGGTTGGAAGTGAT+AGG 0.439207 2:+80911080 None:intergenic
TTTGTAGGACCAATGAGATA+TGG 0.447970 2:-80910393 MsG0280011203.01.T01:intron
AGATCACAAGATTGAATGCT+TGG 0.449911 2:-80907781 MsG0280011203.01.T01:CDS
AAGAATAGAAGGATCTTGTT+GGG 0.450720 2:-80909601 MsG0280011203.01.T01:CDS
ACTTCTTGGCTAGGAAAAGA+TGG 0.450839 2:-80910009 MsG0280011203.01.T01:CDS
TACATTAGCAATCCATGATA+AGG 0.451158 2:-80907843 MsG0280011203.01.T01:CDS
GGCTAGGAAAAGATGGGTAT+TGG 0.451915 2:-80910002 MsG0280011203.01.T01:CDS
TACGTATGAACCCAGTCAAT+TGG 0.452564 2:-80909086 MsG0280011203.01.T01:CDS
GAAGAATAGAAGGATCTTGT+TGG 0.453865 2:-80909602 MsG0280011203.01.T01:CDS
AAAATTGCTGGTTTGCCACC+TGG 0.460562 2:+80910195 None:intergenic
TGATGTTAAACATGTGCTTA+AGG 0.467725 2:-80909782 MsG0280011203.01.T01:CDS
TTATCCTCAAATCCATTATC+CGG 0.468101 2:+80909688 None:intergenic
TTTCCTAGCCAAGAAGTTGT+TGG 0.468993 2:+80910015 None:intergenic
GCTTATTATTGTTCACAAAA+GGG 0.469856 2:+80907590 None:intergenic
GATGTCAAGAAAGGATGGTC+TGG 0.472931 2:-80909547 MsG0280011203.01.T01:CDS
TGGTTTAATTGAATGAAGTT+GGG 0.478880 2:+80911253 None:intergenic
TTGGCCAACCAAGGTGATCA+AGG 0.481677 2:-80909067 MsG0280011203.01.T01:CDS
TTTATATCTGACGGTTGAGA+TGG 0.484965 2:+80910249 None:intergenic
TGTTCCGGATAATGGATTTG+AGG 0.485113 2:-80909692 MsG0280011203.01.T01:CDS
CATATAACAAAGCCTTATCA+TGG 0.485853 2:+80907831 None:intergenic
CTGACCCATTACTTAGAGAA+TGG 0.488472 2:-80910110 MsG0280011203.01.T01:CDS
GAACAATAATAAGCATGGTC+AGG 0.490969 2:-80907581 MsG0280011203.01.T01:three_prime_UTR
TCTTGTGAATTGGACACCAT+TGG 0.493731 2:-80910286 MsG0280011203.01.T01:CDS
TTCACCTCCCTTGATCACCT+TGG 0.496200 2:+80909059 None:intergenic
AAGATGAACTCTCAAGAGTT+CGG 0.497881 2:+80911139 None:intergenic
ATAGAAGGATCTTGTTGGGT+TGG 0.498018 2:-80909597 MsG0280011203.01.T01:CDS
TGGGACTTATGATACTGTTA+AGG 0.500179 2:-80909722 MsG0280011203.01.T01:CDS
TGATCCAATTCTTGAGAGGT+TGG 0.501083 2:+80911070 None:intergenic
TTCTACCAATACAATCCAAA+AGG 0.504711 2:-80910354 MsG0280011203.01.T01:CDS
TTATGAAGCCAGATAGCCCT+TGG 0.506124 2:+80909156 None:intergenic
AATGTGTTGAGATATGATTA+TGG 0.507273 2:-80909661 MsG0280011203.01.T01:CDS
GCAAGCACGTGCAGACCAAA+TGG 0.509880 2:+80908645 None:intergenic
TTATATCTGACGGTTGAGAT+GGG 0.511411 2:+80910250 None:intergenic
CGTCAGATATAAAAGGTTGT+TGG 0.511481 2:-80910239 MsG0280011203.01.T01:CDS
ATAAGGTTGATCGTGATTTG+AGG 0.514989 2:+80911110 None:intergenic
TACTGGTGTTAATTCAGTAC+AGG 0.515915 2:-80909025 MsG0280011203.01.T01:intron
AATAAGAATCCATTAACCAT+TGG 0.517810 2:-80909829 MsG0280011203.01.T01:CDS
TAGGAAAAGATGGGTATTGG+AGG 0.517843 2:-80909999 MsG0280011203.01.T01:CDS
TCATGTGCAGCGATCAAAGC+AGG 0.519327 2:-80908551 MsG0280011203.01.T01:intron
ACATGGTGGGTAGCTTCAAT+GGG 0.520184 2:+80911165 None:intergenic
TAAAGTCCTCCATATCTCAT+TGG 0.522533 2:+80910384 None:intergenic
GAAGCTGTCACTAAGAACTT+TGG 0.524205 2:-80908367 MsG0280011203.01.T01:intron
GGAAGCAAAATACATAGAAA+GGG 0.524791 2:-80909967 MsG0280011203.01.T01:CDS
AAGATCCTTTGATACTGAAT+GGG 0.527419 2:+80910305 None:intergenic
CAAAACTCTCCACCACTGAA+TGG 0.531049 2:+80907906 None:intergenic
CAGGGAAACAGTTGGTGCAA+TGG 0.536764 2:-80909131 MsG0280011203.01.T01:CDS
GCATCAGTAAAAGGTGGTGT+TGG 0.545185 2:-80908669 MsG0280011203.01.T01:CDS
CTGTTTGGGGAAATATTGTG+TGG 0.551490 2:-80910329 MsG0280011203.01.T01:CDS
CAGCTGAAGGAACAGGAATG+TGG 0.551552 2:-80909879 MsG0280011203.01.T01:CDS
TATCTGACGGTTGAGATGGG+TGG 0.553345 2:+80910253 None:intergenic
TGAATTTGCAGACTATTCCA+AGG 0.553988 2:-80909173 MsG0280011203.01.T01:intron
GTTCCTTCAGCTGAATGTAA+AGG 0.562040 2:+80909889 None:intergenic
AGCTGAAGGAACAGGAATGT+GGG 0.562527 2:-80909878 MsG0280011203.01.T01:CDS
AGTGACAGCTTCTCATGAAG+TGG 0.562807 2:+80908378 None:intergenic
CATCCTTTACATTCAGCTGA+AGG 0.563353 2:-80909892 MsG0280011203.01.T01:CDS
TTATCATGGATTGCTAATGT+AGG 0.564154 2:+80907845 None:intergenic
GTTGTTGATGATGTCAAGAA+AGG 0.565288 2:-80909556 MsG0280011203.01.T01:CDS
CTATCTGGCTTCATAAATCA+GGG 0.565560 2:-80909149 MsG0280011203.01.T01:CDS
TTTGTGAACAATAATAAGCA+TGG 0.566089 2:-80907586 MsG0280011203.01.T01:three_prime_UTR
GTATACGTTAATGAAACTTG+AGG 0.567083 2:+80907668 None:intergenic
CCGTTGATCCAATTCTTGAG+AGG 0.568960 2:+80911066 None:intergenic
GGTCTTGATACATCTATGAA+TGG 0.571013 2:-80909808 MsG0280011203.01.T01:CDS
CTTCTTGGCTAGGAAAAGAT+GGG 0.573803 2:-80910008 MsG0280011203.01.T01:CDS
TCTCAAGAGTTCGGTAAACA+TGG 0.574499 2:+80911148 None:intergenic
AATTGGAGAGATAGCCATTG+TGG 0.581945 2:+80911233 None:intergenic
TTTAATTGAATGAAGTTGGG+TGG 0.587068 2:+80911256 None:intergenic
GACCCAACAACTTCTTGGCT+AGG 0.588645 2:-80910018 MsG0280011203.01.T01:CDS
GTGGGCCCATTCAGTATCAA+AGG 0.592486 2:-80910310 MsG0280011203.01.T01:CDS
ATCCACAAAAGTCCCATATG+TGG 0.593272 2:+80908407 None:intergenic
AGAATGATATGACCACATAT+GGG 0.594872 2:-80908419 MsG0280011203.01.T01:CDS
CAAGAGTTCGGTAAACATGG+TGG 0.598399 2:+80911151 None:intergenic
TTCATTCAATTAAACCACAA+TGG 0.602829 2:-80911247 MsG0280011203.01.T01:five_prime_UTR
CATAGATGTATCAAGACCAA+TGG 0.605287 2:+80909813 None:intergenic
CCCAGTCAATTGGCCAACCA+AGG 0.606107 2:-80909076 MsG0280011203.01.T01:CDS
TGGCCAACCAAGGTGATCAA+GGG 0.606547 2:-80909066 MsG0280011203.01.T01:CDS
TGTTTGGGGAAATATTGTGT+GGG 0.611046 2:-80910328 MsG0280011203.01.T01:CDS
GTGACAGCTTCTCATGAAGT+GGG 0.617462 2:+80908379 None:intergenic
AAGAGTTCGGTAAACATGGT+GGG 0.619926 2:+80911152 None:intergenic
GTAGGACCAATGAGATATGG+AGG 0.621441 2:-80910390 MsG0280011203.01.T01:intron
TCATAAATCAGGGAAACAGT+TGG 0.623557 2:-80909139 MsG0280011203.01.T01:CDS
GGGTGGATTGCATGATCCAA+TGG 0.626420 2:+80910270 None:intergenic
ACAGATTGACCATTCAGTGG+TGG 0.630975 2:-80907915 MsG0280011203.01.T01:intron
CCTCTCAAGAATTGGATCAA+CGG 0.632578 2:-80911066 MsG0280011203.01.T01:five_prime_UTR
TTGATGATGTCAAGAAAGGA+TGG 0.633579 2:-80909552 MsG0280011203.01.T01:CDS
AATCCAAAAGGTGCTGTTTG+GGG 0.637524 2:-80910342 MsG0280011203.01.T01:CDS
GAATTTGCAGACTATTCCAA+GGG 0.640212 2:-80909172 MsG0280011203.01.T01:intron
ATACTAATTAAACAGGAGAG+TGG 0.656392 2:-80907716 MsG0280011203.01.T01:three_prime_UTR
AGGAAAAGATGGGTATTGGA+GGG 0.661351 2:-80909998 MsG0280011203.01.T01:CDS
AAGGGTGCATCAGTAAAAGG+TGG 0.677299 2:-80908675 MsG0280011203.01.T01:CDS
CCAACCAAGGTGATCAAGGG+AGG 0.681398 2:-80909063 MsG0280011203.01.T01:CDS
TTGACAGATTGACCATTCAG+TGG 0.705722 2:-80907918 MsG0280011203.01.T01:intron
TCAGCAACAATACTTCCAGG+TGG 0.756866 2:-80910210 MsG0280011203.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAATAAAAAATAAT+TGG - Chr2:80909538-80909557 MsG0280011203.01.T01:intron 0.0%
!!! ATTATTTTTTATTTTTTTTA+AGG + Chr2:80909538-80909557 None:intergenic 0.0%
!! AAAATTCACTTTAATATAAA+AGG + Chr2:80908372-80908391 None:intergenic 10.0%
!!! GATATGATTTTTAATTTTTT+AGG - Chr2:80909391-80909410 MsG0280011203.01.T01:intron 10.0%
!!! GTTTTAATTTTACTAATTTA+TGG - Chr2:80910454-80910473 MsG0280011203.01.T01:intron 10.0%
!! AATTATTGGTACATAATTTA+AGG + Chr2:80910276-80910295 None:intergenic 15.0%
!!! AAAGTAAAAATTTTGTTGAT+TGG - Chr2:80908862-80908881 MsG0280011203.01.T01:intron 15.0%
!!! AAATAGTTTATTGATTTCTT+TGG - Chr2:80910600-80910619 MsG0280011203.01.T01:intron 15.0%
!!! AAGTAAAAATTTTGTTGATT+GGG - Chr2:80908863-80908882 MsG0280011203.01.T01:intron 15.0%
!!! ATATCTTTTAATACTTTGAT+AGG - Chr2:80910331-80910350 MsG0280011203.01.T01:CDS 15.0%
!!! GATGTTTTGTTTTTTTTTTT+TGG - Chr2:80908305-80908324 MsG0280011203.01.T01:intron 15.0%
!!! TAACTTTGTTTTGAAATTAT+TGG + Chr2:80910290-80910309 None:intergenic 15.0%
!!! TATAGATAATGTTCTTTTAT+TGG - Chr2:80911096-80911115 MsG0280011203.01.T01:five_prime_UTR 15.0%
!! AAATAAATGCAAGTTCATTT+AGG - Chr2:80908748-80908767 MsG0280011203.01.T01:CDS 20.0%
!! AAATACAACCTATATAAGAA+AGG - Chr2:80909944-80909963 MsG0280011203.01.T01:CDS 20.0%
!! AATAAATGCAAGTTCATTTA+GGG - Chr2:80908749-80908768 MsG0280011203.01.T01:CDS 20.0%
!! AATACAACCTATATAAGAAA+GGG - Chr2:80909945-80909964 MsG0280011203.01.T01:CDS 20.0%
!! GAAAGTGGTATAAAAAAATT+GGG + Chr2:80907962-80907981 None:intergenic 20.0%
!! TGAAAGTGGTATAAAAAAAT+TGG + Chr2:80907963-80907982 None:intergenic 20.0%
!! TTGTTATATGCTTTCAATAA+TGG - Chr2:80910971-80910990 MsG0280011203.01.T01:intron 20.0%
!! TTTAATACAGGAAAAAAATC+AGG + Chr2:80908942-80908961 None:intergenic 20.0%
!!! AAAATTTGTTAAATAGTCCA+GGG + Chr2:80908208-80908227 None:intergenic 20.0%
!!! AAATTTAAAACATGTGTCAT+CGG + Chr2:80910729-80910748 None:intergenic 20.0%
!!! AAGTGAATTTTTGTTTTTGT+AGG - Chr2:80908381-80908400 MsG0280011203.01.T01:CDS 20.0%
!!! AATGGATTCTTATTTAATAC+AGG + Chr2:80908954-80908973 None:intergenic 20.0%
!!! AGCATTGATATTTAACAAAT+GGG + Chr2:80907989-80908008 None:intergenic 20.0%
!!! ATAGTTTTTACATGTCAATA+TGG - Chr2:80909795-80909814 MsG0280011203.01.T01:CDS 20.0%
!!! CAAAATTTGCTAACTTTATA+TGG - Chr2:80910642-80910661 MsG0280011203.01.T01:intron 20.0%
!!! CATATAAAGTTAGCAAATTT+TGG + Chr2:80910644-80910663 None:intergenic 20.0%
!!! CTAAAACATTTTTTGATGAT+GGG - Chr2:80909165-80909184 MsG0280011203.01.T01:CDS 20.0%
!!! TAAAATTTGTTAAATAGTCC+AGG + Chr2:80908209-80908228 None:intergenic 20.0%
!!! TAGCATTGATATTTAACAAA+TGG + Chr2:80907990-80908009 None:intergenic 20.0%
!!! TCTAAAACATTTTTTGATGA+TGG - Chr2:80909164-80909183 MsG0280011203.01.T01:CDS 20.0%
!!! TTTTGAACTTGATGATTATT+TGG + Chr2:80908636-80908655 None:intergenic 20.0%
! AAACATGATCACTATTTGAT+TGG - Chr2:80909047-80909066 MsG0280011203.01.T01:CDS 25.0%
! AACATGATCACTATTTGATT+GGG - Chr2:80909048-80909067 MsG0280011203.01.T01:CDS 25.0%
! AAGAGAGTTAGCAATAAAAT+TGG + Chr2:80907576-80907595 None:intergenic 25.0%
! AATAAGAATCCATTAACCAT+TGG - Chr2:80908960-80908979 MsG0280011203.01.T01:intron 25.0%
! AATGTGTTGAGATATGATTA+TGG - Chr2:80909128-80909147 MsG0280011203.01.T01:CDS 25.0%
! AATTAGTATCACTACTTCTT+AGG + Chr2:80911062-80911081 None:intergenic 25.0%
! AATTGTTATATACTAGTGCA+TGG - Chr2:80909561-80909580 MsG0280011203.01.T01:CDS 25.0%
! AGACAAAAATGACCAAATAT+AGG + Chr2:80910819-80910838 None:intergenic 25.0%
! AGTAGTGATACTAATTAAAC+AGG - Chr2:80911066-80911085 MsG0280011203.01.T01:five_prime_UTR 25.0%
! CAGATATCAACATAAGAATT+TGG - Chr2:80910212-80910231 MsG0280011203.01.T01:CDS 25.0%
! GATTAAAATATTTAGCGCAA+GGG + Chr2:80907793-80907812 None:intergenic 25.0%
! GCTTATTATTGTTCACAAAA+GGG + Chr2:80911202-80911221 None:intergenic 25.0%
! GGAATCATAAACACAATAAT+TGG - Chr2:80910475-80910494 MsG0280011203.01.T01:intron 25.0%
! GTTAAATATCAATGCTATAG+AGG - Chr2:80907993-80908012 MsG0280011203.01.T01:intron 25.0%
! TAACTTTATATGGATGTAGA+TGG - Chr2:80910652-80910671 MsG0280011203.01.T01:intron 25.0%
! TATCCATTTGTCCAATAATT+CGG + Chr2:80910070-80910089 None:intergenic 25.0%
! TGATATTAACACGTCAATAT+TGG + Chr2:80909842-80909861 None:intergenic 25.0%
! TGATTAAAATATTTAGCGCA+AGG + Chr2:80907794-80907813 None:intergenic 25.0%
! TGCTTATTATTGTTCACAAA+AGG + Chr2:80911203-80911222 None:intergenic 25.0%
! TGGTTTAATTGAATGAAGTT+GGG + Chr2:80907539-80907558 None:intergenic 25.0%
! TGTTTGTGTGTAAAATACAA+GGG + Chr2:80907917-80907936 None:intergenic 25.0%
! TTAAATTAATCAATAGTCCC+TGG - Chr2:80908188-80908207 MsG0280011203.01.T01:intron 25.0%
! TTCATTCAATTAAACCACAA+TGG - Chr2:80907542-80907561 MsG0280011203.01.T01:three_prime_UTR 25.0%
! TTTGTGAACAATAATAAGCA+TGG - Chr2:80911203-80911222 MsG0280011203.01.T01:five_prime_UTR 25.0%
!! AATTTAAAACATGTGTCATC+GGG + Chr2:80910728-80910747 None:intergenic 25.0%
!! ATAAAGTTAGCAAATTTTGG+TGG + Chr2:80910641-80910660 None:intergenic 25.0%
!! ATGATTTTATCAATACTTCG+TGG + Chr2:80910558-80910577 None:intergenic 25.0%
!! CAAATTTTGTGTAGTCAAAA+GGG - Chr2:80910096-80910115 MsG0280011203.01.T01:CDS 25.0%
!! TTTTCCATTCTCTAAGTAAT+GGG + Chr2:80908686-80908705 None:intergenic 25.0%
!! TTTTTCCATTCTCTAAGTAA+TGG + Chr2:80908687-80908706 None:intergenic 25.0%
!!! ATTTGGTCATTTTTGTCTTT+TGG - Chr2:80910821-80910840 MsG0280011203.01.T01:intron 25.0%
!!! CTTTTGACTACACAAAATTT+GGG + Chr2:80910097-80910116 None:intergenic 25.0%
!!! GTGTATTTTTTTTCTTCTAC+AGG - Chr2:80910002-80910021 MsG0280011203.01.T01:CDS 25.0%
!!! TAAAGTTAGCAAATTTTGGT+GGG + Chr2:80910640-80910659 None:intergenic 25.0%
!!! TCATTTGAAGTGAAAGATTT+TGG - Chr2:80910039-80910058 MsG0280011203.01.T01:CDS 25.0%
!!! TTTATTTTGTTAGCAACAGT+AGG + Chr2:80908735-80908754 None:intergenic 25.0%
!!! TTTTGACTACACAAAATTTG+GGG + Chr2:80910096-80910115 None:intergenic 25.0%
AAGAATAGAAGGATCTTGTT+GGG - Chr2:80909188-80909207 MsG0280011203.01.T01:intron 30.0%
AAGATCCTTTGATACTGAAT+GGG + Chr2:80908487-80908506 None:intergenic 30.0%
AATGCAGAGTTTCCTATATT+TGG - Chr2:80910804-80910823 MsG0280011203.01.T01:intron 30.0%
ACATGTTATGCTGATCAAAA+TGG - Chr2:80907857-80907876 MsG0280011203.01.T01:CDS 30.0%
ACTGAATTAACACCAGTAAT+TGG + Chr2:80909762-80909781 None:intergenic 30.0%
AGAATGATATGACCACATAT+GGG - Chr2:80910370-80910389 MsG0280011203.01.T01:CDS 30.0%
ATACTAATTAAACAGGAGAG+TGG - Chr2:80911073-80911092 MsG0280011203.01.T01:five_prime_UTR 30.0%
ATCACCAAAAAATCCATTGA+TGG - Chr2:80908707-80908726 MsG0280011203.01.T01:CDS 30.0%
CAAGCAAAGTAGAAATTAGT+TGG + Chr2:80907824-80907843 None:intergenic 30.0%
CAATATTGTATCTCGTATGA+CGG - Chr2:80909860-80909879 MsG0280011203.01.T01:CDS 30.0%
GGAAGCAAAATACATAGAAA+GGG - Chr2:80908822-80908841 MsG0280011203.01.T01:intron 30.0%
GTATACGTTAATGAAACTTG+AGG + Chr2:80911124-80911143 None:intergenic 30.0%
GTGGTTTAATTGAATGAAGT+TGG + Chr2:80907540-80907559 None:intergenic 30.0%
GTGTTTGTGTGTAAAATACA+AGG + Chr2:80907918-80907937 None:intergenic 30.0%
TAACAAATGGGTAATGAAAG+TGG + Chr2:80907977-80907996 None:intergenic 30.0%
TACATTAGCAATCCATGATA+AGG - Chr2:80910946-80910965 MsG0280011203.01.T01:intron 30.0%
TATCAAAGGATCTTGTGAAT+TGG - Chr2:80908493-80908512 MsG0280011203.01.T01:intron 30.0%
TGATGTTAAACATGTGCTTA+AGG - Chr2:80909007-80909026 MsG0280011203.01.T01:intron 30.0%
TGGAAGCAAAATACATAGAA+AGG - Chr2:80908821-80908840 MsG0280011203.01.T01:intron 30.0%
TTATCCTCAAATCCATTATC+CGG + Chr2:80909104-80909123 None:intergenic 30.0%
TTCTACCAATACAATCCAAA+AGG - Chr2:80908435-80908454 MsG0280011203.01.T01:CDS 30.0%
TTTAATTGAATGAAGTTGGG+TGG + Chr2:80907536-80907555 None:intergenic 30.0%
! AATGGGTCAGACATATTTTT+GGG + Chr2:80908669-80908688 None:intergenic 30.0%
! ACATCCTGATTTTGTAAAGT+AGG - Chr2:80908062-80908081 MsG0280011203.01.T01:intron 30.0%
! CAACAACCTTTTATATCTGA+CGG + Chr2:80908552-80908571 None:intergenic 30.0%
! CATATAACAAAGCCTTATCA+TGG + Chr2:80910961-80910980 None:intergenic 30.0%
! CATCCTGATTTTGTAAAGTA+GGG - Chr2:80908063-80908082 MsG0280011203.01.T01:intron 30.0%
! CCAAATTTTGTGTAGTCAAA+AGG - Chr2:80910095-80910114 MsG0280011203.01.T01:CDS 30.0%
! TCATCCAAAAAGTGTAGAAA+AGG + Chr2:80908332-80908351 None:intergenic 30.0%
! TTATCATGGATTGCTAATGT+AGG + Chr2:80910947-80910966 None:intergenic 30.0%
!! AAAAAATTGGGAGTGTTTGA+AGG + Chr2:80907950-80907969 None:intergenic 30.0%
!! CCTTTTGACTACACAAAATT+TGG + Chr2:80910098-80910117 None:intergenic 30.0%
!! TAATGGGTCAGACATATTTT+TGG + Chr2:80908670-80908689 None:intergenic 30.0%
!! TGAAGTGAAAGATTTTGGAA+AGG - Chr2:80910044-80910063 MsG0280011203.01.T01:CDS 30.0%
!! TGTTAAGGATGTTTTTGTTC+CGG - Chr2:80909082-80909101 MsG0280011203.01.T01:CDS 30.0%
!!! AGATTTTCAAGTTCTTTCAC+TGG + Chr2:80909684-80909703 None:intergenic 30.0%
!!! TACTTCGTGGTTTTATAATC+AGG + Chr2:80910545-80910564 None:intergenic 30.0%
AAGAGGATTGAACTAACCAT+TGG + Chr2:80907894-80907913 None:intergenic 35.0%
AAGATGAACTCTCAAGAGTT+CGG + Chr2:80907653-80907672 None:intergenic 35.0%
AAGTGATAGGCAGTTCTATA+AGG + Chr2:80907699-80907718 None:intergenic 35.0%
ACTCTCTTCTCTCTCATTTA+TGG - Chr2:80907588-80907607 MsG0280011203.01.T01:three_prime_UTR 35.0%
AGAGGATTGAACTAACCATT+GGG + Chr2:80907893-80907912 None:intergenic 35.0%
AGATCACAAGATTGAATGCT+TGG - Chr2:80911008-80911027 MsG0280011203.01.T01:intron 35.0%
AGCTGAATGTAAAGGATGTT+TGG + Chr2:80908895-80908914 None:intergenic 35.0%
ATTCCAGTGTACAAAATTGC+TGG + Chr2:80908609-80908628 None:intergenic 35.0%
CAAGATCCTTTGATACTGAA+TGG + Chr2:80908488-80908507 None:intergenic 35.0%
CATAGATGTATCAAGACCAA+TGG + Chr2:80908979-80908998 None:intergenic 35.0%
CGTCAGATATAAAAGGTTGT+TGG - Chr2:80908550-80908569 MsG0280011203.01.T01:intron 35.0%
GAACAATAATAAGCATGGTC+AGG - Chr2:80911208-80911227 MsG0280011203.01.T01:five_prime_UTR 35.0%
GAAGAATAGAAGGATCTTGT+TGG - Chr2:80909187-80909206 MsG0280011203.01.T01:intron 35.0%
GAATTTGCAGACTATTCCAA+GGG - Chr2:80909617-80909636 MsG0280011203.01.T01:CDS 35.0%
GAGAATGATATGACCACATA+TGG - Chr2:80910369-80910388 MsG0280011203.01.T01:CDS 35.0%
GATATAAAAGGTTGTTGGTC+AGG - Chr2:80908555-80908574 MsG0280011203.01.T01:CDS 35.0%
GCATGTACCCTTTCTTATAT+AGG + Chr2:80909955-80909974 None:intergenic 35.0%
GGTCTTGATACATCTATGAA+TGG - Chr2:80908981-80909000 MsG0280011203.01.T01:intron 35.0%
GTATCAAGACCAATGGTTAA+TGG + Chr2:80908972-80908991 None:intergenic 35.0%
TAAAGTCCTCCATATCTCAT+TGG + Chr2:80908408-80908427 None:intergenic 35.0%
TCATAAATCAGGGAAACAGT+TGG - Chr2:80909650-80909669 MsG0280011203.01.T01:CDS 35.0%
TCTCAACCGTCAGATATAAA+AGG - Chr2:80908543-80908562 MsG0280011203.01.T01:intron 35.0%
TGAATTTGCAGACTATTCCA+AGG - Chr2:80909616-80909635 MsG0280011203.01.T01:CDS 35.0%
TGATCAGCATAACATGTCAA+AGG + Chr2:80907854-80907873 None:intergenic 35.0%
TGGGACTTATGATACTGTTA+AGG - Chr2:80909067-80909086 MsG0280011203.01.T01:CDS 35.0%
TGTCCCTACTTTACAAAATC+AGG + Chr2:80908069-80908088 None:intergenic 35.0%
TGTGTAAAATACAAGGGAAG+AGG + Chr2:80907911-80907930 None:intergenic 35.0%
TGTTTGGGGAAATATTGTGT+GGG - Chr2:80908461-80908480 MsG0280011203.01.T01:intron 35.0%
TTATATCTGACGGTTGAGAT+GGG + Chr2:80908542-80908561 None:intergenic 35.0%
TTTATATCTGACGGTTGAGA+TGG + Chr2:80908543-80908562 None:intergenic 35.0%
TTTGTAGGACCAATGAGATA+TGG - Chr2:80908396-80908415 MsG0280011203.01.T01:CDS 35.0%
! AAACCAGCAATTTTGTACAC+TGG - Chr2:80908603-80908622 MsG0280011203.01.T01:CDS 35.0%
! ACATGTGCTTAAGGTTAGTT+TGG - Chr2:80909016-80909035 MsG0280011203.01.T01:intron 35.0%
! ATAAGGTTGATCGTGATTTG+AGG + Chr2:80907682-80907701 None:intergenic 35.0%
! CTATCTGGCTTCATAAATCA+GGG - Chr2:80909640-80909659 MsG0280011203.01.T01:CDS 35.0%
! CTGGAATCCATGTAAGTTTT+GGG - Chr2:80909261-80909280 MsG0280011203.01.T01:intron 35.0%
! GGTGAATTGATTCCAATTAC+TGG - Chr2:80909747-80909766 MsG0280011203.01.T01:CDS 35.0%
! TACTGGTGTTAATTCAGTAC+AGG - Chr2:80909764-80909783 MsG0280011203.01.T01:CDS 35.0%
! TGGAATCCATGTAAGTTTTG+GGG - Chr2:80909262-80909281 MsG0280011203.01.T01:intron 35.0%
! TGGTCCTTTTCTACACTTTT+TGG - Chr2:80908325-80908344 MsG0280011203.01.T01:intron 35.0%
!! GATGTTTTTGTTCCGGATAA+TGG - Chr2:80909089-80909108 MsG0280011203.01.T01:CDS 35.0%
!! GTTGTTGATGATGTCAAGAA+AGG - Chr2:80909233-80909252 MsG0280011203.01.T01:intron 35.0%
!! TCTGGAATCCATGTAAGTTT+TGG - Chr2:80909260-80909279 MsG0280011203.01.T01:intron 35.0%
!! TTGATGATGGGAAGAATAGA+AGG - Chr2:80909177-80909196 MsG0280011203.01.T01:intron 35.0%
!! TTGATGATGTCAAGAAAGGA+TGG - Chr2:80909237-80909256 MsG0280011203.01.T01:intron 35.0%
!! TTTTGGAAAGGCCGAATTAT+TGG - Chr2:80910056-80910075 MsG0280011203.01.T01:CDS 35.0%
!!! GGTTCCATCAATGGATTTTT+TGG + Chr2:80908714-80908733 None:intergenic 35.0%
!!! GTCAGACATATTTTTGGGTA+TGG + Chr2:80908664-80908683 None:intergenic 35.0%
AAGAGTTCGGTAAACATGGT+GGG + Chr2:80907640-80907659 None:intergenic 40.0%
AAGTAGCCCCAAAACTTACA+TGG + Chr2:80909271-80909290 None:intergenic 40.0%
AATTGGAGAGATAGCCATTG+TGG + Chr2:80907559-80907578 None:intergenic 40.0%
ACTTCCAACCTCTCAAGAAT+TGG - Chr2:80907715-80907734 MsG0280011203.01.T01:three_prime_UTR 40.0%
ACTTCTTGGCTAGGAAAAGA+TGG - Chr2:80908780-80908799 MsG0280011203.01.T01:intron 40.0%
AGGCCGAATTATTGGACAAA+TGG - Chr2:80910064-80910083 MsG0280011203.01.T01:CDS 40.0%
ATAGAAGGATCTTGTTGGGT+TGG - Chr2:80909192-80909211 MsG0280011203.01.T01:intron 40.0%
ATCCACAAAAGTCCCATATG+TGG + Chr2:80910385-80910404 None:intergenic 40.0%
CATCCTTTACATTCAGCTGA+AGG - Chr2:80908897-80908916 MsG0280011203.01.T01:intron 40.0%
CCTCTCAAGAATTGGATCAA+CGG - Chr2:80907723-80907742 MsG0280011203.01.T01:three_prime_UTR 40.0%
CTGACCCATTACTTAGAGAA+TGG - Chr2:80908679-80908698 MsG0280011203.01.T01:CDS 40.0%
CTGTTTGGGGAAATATTGTG+TGG - Chr2:80908460-80908479 MsG0280011203.01.T01:intron 40.0%
CTTCTTGGCTAGGAAAAGAT+GGG - Chr2:80908781-80908800 MsG0280011203.01.T01:intron 40.0%
GAAGCTGTCACTAAGAACTT+TGG - Chr2:80910422-80910441 MsG0280011203.01.T01:intron 40.0%
GAGGATTGAACTAACCATTG+GGG + Chr2:80907892-80907911 None:intergenic 40.0%
GGATGTAGATGGTCAAGATA+TGG - Chr2:80910663-80910682 MsG0280011203.01.T01:intron 40.0%
GTTCCTTCAGCTGAATGTAA+AGG + Chr2:80908903-80908922 None:intergenic 40.0%
TACGTATGAACCCAGTCAAT+TGG - Chr2:80909703-80909722 MsG0280011203.01.T01:CDS 40.0%
TAGAAGGATCTTGTTGGGTT+GGG - Chr2:80909193-80909212 MsG0280011203.01.T01:intron 40.0%
TCTCAAGAGTTCGGTAAACA+TGG + Chr2:80907644-80907663 None:intergenic 40.0%
TCTTGTGAATTGGACACCAT+TGG - Chr2:80908503-80908522 MsG0280011203.01.T01:intron 40.0%
TGATCCAATTCTTGAGAGGT+TGG + Chr2:80907722-80907741 None:intergenic 40.0%
TTACATTCAGCTGAAGGAAC+AGG - Chr2:80908903-80908922 MsG0280011203.01.T01:intron 40.0%
TTCCTAGCCAAGAAGTTGTT+GGG + Chr2:80908776-80908795 None:intergenic 40.0%
TTGACAGATTGACCATTCAG+TGG - Chr2:80910871-80910890 MsG0280011203.01.T01:intron 40.0%
TTTCCTAGCCAAGAAGTTGT+TGG + Chr2:80908777-80908796 None:intergenic 40.0%
! AATTAGTTTGACACGCGTCT+AGG + Chr2:80909446-80909465 None:intergenic 40.0%
! ATTAGTTTGACACGCGTCTA+GGG + Chr2:80909445-80909464 None:intergenic 40.0%
! CAAAAGGGTGCATCAGTAAA+AGG - Chr2:80910111-80910130 MsG0280011203.01.T01:CDS 40.0%
! CAGCACCTTTTGGATTGTAT+TGG + Chr2:80908443-80908462 None:intergenic 40.0%
! GCTATCTGGCTTCATAAATC+AGG - Chr2:80909639-80909658 MsG0280011203.01.T01:CDS 40.0%
!! AATCCAAAAGGTGCTGTTTG+GGG - Chr2:80908447-80908466 MsG0280011203.01.T01:intron 40.0%
!! ACAATCCAAAAGGTGCTGTT+TGG - Chr2:80908445-80908464 MsG0280011203.01.T01:intron 40.0%
!! AGGAAAAGATGGGTATTGGA+GGG - Chr2:80908791-80908810 MsG0280011203.01.T01:intron 40.0%
!! CAATCCAAAAGGTGCTGTTT+GGG - Chr2:80908446-80908465 MsG0280011203.01.T01:intron 40.0%
!! GGGTATTGGAGGGTATTAAT+TGG - Chr2:80908801-80908820 MsG0280011203.01.T01:intron 40.0%
!! TAGGAAAAGATGGGTATTGG+AGG - Chr2:80908790-80908809 MsG0280011203.01.T01:intron 40.0%
!! TGTTCCGGATAATGGATTTG+AGG - Chr2:80909097-80909116 MsG0280011203.01.T01:CDS 40.0%
ACAGATTGACCATTCAGTGG+TGG - Chr2:80910874-80910893 MsG0280011203.01.T01:intron 45.0%
AGACTATTCCAAGGGCTATC+TGG - Chr2:80909625-80909644 MsG0280011203.01.T01:CDS 45.0%
AGCTGAAGGAACAGGAATGT+GGG - Chr2:80908911-80908930 MsG0280011203.01.T01:intron 45.0%
AGTGACAGCTTCTCATGAAG+TGG + Chr2:80910414-80910433 None:intergenic 45.0%
CAAAACTCTCCACCACTGAA+TGG + Chr2:80910886-80910905 None:intergenic 45.0%
CAAGAGTTCGGTAAACATGG+TGG + Chr2:80907641-80907660 None:intergenic 45.0%
CCGTTGATCCAATTCTTGAG+AGG + Chr2:80907726-80907745 None:intergenic 45.0%
CTTGAGAGGTTGGAAGTGAT+AGG + Chr2:80907712-80907731 None:intergenic 45.0%
GATGTCAAGAAAGGATGGTC+TGG - Chr2:80909242-80909261 MsG0280011203.01.T01:intron 45.0%
GCAACAGTAGGTTCCATCAA+TGG + Chr2:80908723-80908742 None:intergenic 45.0%
GCATCAGTAAAAGGTGGTGT+TGG - Chr2:80910120-80910139 MsG0280011203.01.T01:CDS 45.0%
GGAAACTCTGCATTTGCACT+TGG + Chr2:80910798-80910817 None:intergenic 45.0%
GGCTAGGAAAAGATGGGTAT+TGG - Chr2:80908787-80908806 MsG0280011203.01.T01:intron 45.0%
GTAGGACCAATGAGATATGG+AGG - Chr2:80908399-80908418 MsG0280011203.01.T01:CDS 45.0%
GTGACAGCTTCTCATGAAGT+GGG + Chr2:80910413-80910432 None:intergenic 45.0%
TCAGCAACAATACTTCCAGG+TGG - Chr2:80908579-80908598 MsG0280011203.01.T01:CDS 45.0%
TTAGGGACCCAACAACTTCT+TGG - Chr2:80908766-80908785 MsG0280011203.01.T01:CDS 45.0%
TTATGAAGCCAGATAGCCCT+TGG + Chr2:80909636-80909655 None:intergenic 45.0%
! AAAGGTGGTGTTGGACCATT+TGG - Chr2:80910129-80910148 MsG0280011203.01.T01:CDS 45.0%
! AAGGGTGCATCAGTAAAAGG+TGG - Chr2:80910114-80910133 MsG0280011203.01.T01:CDS 45.0%
! GACCACATATGGGACTTTTG+TGG - Chr2:80910380-80910399 MsG0280011203.01.T01:CDS 45.0%
! TTTCCCCAAACAGCACCTTT+TGG + Chr2:80908453-80908472 None:intergenic 45.0%
!! AAAATTGCTGGTTTGCCACC+TGG + Chr2:80908597-80908616 None:intergenic 45.0%
!! AACATGGTGGGTAGCTTCAA+TGG + Chr2:80907628-80907647 None:intergenic 45.0%
!! ACATGGTGGGTAGCTTCAAT+GGG + Chr2:80907627-80907646 None:intergenic 45.0%
!! CATTCAGTGGTGGAGAGTTT+TGG - Chr2:80910884-80910903 MsG0280011203.01.T01:intron 45.0%
!! ATATTATATATTAAAATGAT+TGG - Chr2:80908025-80908044 MsG0280011203.01.T01:intron 5.0%
!!! ATCATTTTAATATATAATAT+AGG + Chr2:80908025-80908044 None:intergenic 5.0%
AATGGACATGCAGACCCCAA+TGG - Chr2:80907875-80907894 MsG0280011203.01.T01:CDS 50.0%
CAGCTGAAGGAACAGGAATG+TGG - Chr2:80908910-80908929 MsG0280011203.01.T01:intron 50.0%
CTGCACGTGCTTGCTTCTAA+AGG - Chr2:80910153-80910172 MsG0280011203.01.T01:CDS 50.0%
GACCCAACAACTTCTTGGCT+AGG - Chr2:80908771-80908790 MsG0280011203.01.T01:intron 50.0%
GGCTCAGCAACAATACTTCC+AGG - Chr2:80908576-80908595 MsG0280011203.01.T01:CDS 50.0%
GTGGGCCCATTCAGTATCAA+AGG - Chr2:80908479-80908498 MsG0280011203.01.T01:intron 50.0%
TATCTGACGGTTGAGATGGG+TGG + Chr2:80908539-80908558 None:intergenic 50.0%
TCATGTGCAGCGATCAAAGC+AGG - Chr2:80910238-80910257 MsG0280011203.01.T01:CDS 50.0%
TGGCCAACCAAGGTGATCAA+GGG - Chr2:80909723-80909742 MsG0280011203.01.T01:CDS 50.0%
TTCACCTCCCTTGATCACCT+TGG + Chr2:80909733-80909752 None:intergenic 50.0%
TTGGCCAACCAAGGTGATCA+AGG - Chr2:80909722-80909741 MsG0280011203.01.T01:CDS 50.0%
! ACCTTGGTTGGCCAATTGAC+TGG + Chr2:80909717-80909736 None:intergenic 50.0%
! CAGGGAAACAGTTGGTGCAA+TGG - Chr2:80909658-80909677 MsG0280011203.01.T01:CDS 50.0%
! CCTTGGTTGGCCAATTGACT+GGG + Chr2:80909716-80909735 None:intergenic 50.0%
!! GGGTGGATTGCATGATCCAA+TGG + Chr2:80908522-80908541 None:intergenic 50.0%
!! GTGGAGAGTTTTGGTGGAGA+AGG - Chr2:80910893-80910912 MsG0280011203.01.T01:intron 50.0%
!! TCAGTGGTGGAGAGTTTTGG+TGG - Chr2:80910887-80910906 MsG0280011203.01.T01:intron 50.0%
CCAACCAAGGTGATCAAGGG+AGG - Chr2:80909726-80909745 MsG0280011203.01.T01:CDS 55.0%
CCCAGTCAATTGGCCAACCA+AGG - Chr2:80909713-80909732 MsG0280011203.01.T01:CDS 55.0%
CCTCCCTTGATCACCTTGGT+TGG + Chr2:80909729-80909748 None:intergenic 55.0%
GCAAGCACGTGCAGACCAAA+TGG + Chr2:80910147-80910166 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 80907532 80911279 80907532 ID=MsG0280011203.01;Name=MsG0280011203.01
Chr2 mRNA 80907532 80911279 80907532 ID=MsG0280011203.01.T01;Parent=MsG0280011203.01;Name=MsG0280011203.01.T01;_AED=0.50;_eAED=0.50;_QI=226|1|1|1|0.8|0.66|6|222|509
Chr2 exon 80907532 80907933 80907532 ID=MsG0280011203.01.T01:exon:28764;Parent=MsG0280011203.01.T01
Chr2 exon 80908368 80908458 80908368 ID=MsG0280011203.01.T01:exon:28763;Parent=MsG0280011203.01.T01
Chr2 exon 80908552 80908787 80908552 ID=MsG0280011203.01.T01:exon:28762;Parent=MsG0280011203.01.T01
Chr2 exon 80909026 80909184 80909026 ID=MsG0280011203.01.T01:exon:28761;Parent=MsG0280011203.01.T01
Chr2 exon 80909540 80910408 80909540 ID=MsG0280011203.01.T01:exon:28760;Parent=MsG0280011203.01.T01
Chr2 exon 80911059 80911279 80911059 ID=MsG0280011203.01.T01:exon:28759;Parent=MsG0280011203.01.T01
Chr2 five_prime_UTR 80911059 80911279 80911059 ID=MsG0280011203.01.T01:five_prime_utr;Parent=MsG0280011203.01.T01
Chr2 five_prime_UTR 80910404 80910408 80910404 ID=MsG0280011203.01.T01:five_prime_utr;Parent=MsG0280011203.01.T01
Chr2 CDS 80909540 80910403 80909540 ID=MsG0280011203.01.T01:cds;Parent=MsG0280011203.01.T01
Chr2 CDS 80909026 80909184 80909026 ID=MsG0280011203.01.T01:cds;Parent=MsG0280011203.01.T01
Chr2 CDS 80908552 80908787 80908552 ID=MsG0280011203.01.T01:cds;Parent=MsG0280011203.01.T01
Chr2 CDS 80908368 80908458 80908368 ID=MsG0280011203.01.T01:cds;Parent=MsG0280011203.01.T01
Chr2 CDS 80907754 80907933 80907754 ID=MsG0280011203.01.T01:cds;Parent=MsG0280011203.01.T01
Chr2 three_prime_UTR 80907532 80907753 80907532 ID=MsG0280011203.01.T01:three_prime_utr;Parent=MsG0280011203.01.T01
Gene Sequence

>MsG0280011203.01.T01

ATGAGATATGGAGGACTTTATCATCTGTTCTACCAATACAATCCAAAAGGTGCTGTTTGGGGAAATATTGTGTGGGCCCATTCAGTATCAAAGGATCTTGTGAATTGGACACCATTGGATCATGCAATCCACCCATCTCAACCGTCAGATATAAAAGGTTGTTGGTCAGGCTCAGCAACAATACTTCCAGGTGGCAAACCAGCAATTTTGTACACTGGAATTGATCCAAATAATCATCAAGTTCAAAACATAGCCATACCCAAAAATATGTCTGACCCATTACTTAGAGAATGGAAAAAATCACCAAAAAATCCATTGATGGAACCTACTGTTGCTAACAAAATAAATGCAAGTTCATTTAGGGACCCAACAACTTCTTGGCTAGGAAAAGATGGGTATTGGAGGGTATTAATTGGAAGCAAAATACATAGAAAGGGAATTGCAATTATGTACAAAAGTAAAAATTTTGTTGATTGGGTTGAAGCCAAACATCCTTTACATTCAGCTGAAGGAACAGGAATGTGGGAGTGTCCTGATTTTTTTCCTGTATTAAATAAGAATCCATTAACCATTGGTCTTGATACATCTATGAATGGTGATGATGTTAAACATGTGCTTAAGGTTAGTTTGGATGACACAAAACATGATCACTATTTGATTGGGACTTATGATACTGTTAAGGATGTTTTTGTTCCGGATAATGGATTTGAGGATAATCAAAATGTGTTGAGATATGATTATGGAAAATATTATGCATCTAAAACATTTTTTGATGATGGGAAGAATAGAAGGATCTTGTTGGGTTGGGCTAATGAATCTTCAAGTGTTGTTGATGATGTCAAGAAAGGATGGTCTGGAATCCATACTATTCCAAGGGCTATCTGGCTTCATAAATCAGGGAAACAGTTGGTGCAATGGCCAGTGAAAGAACTTGAAAATCTACGTATGAACCCAGTCAATTGGCCAACCAAGGTGATCAAGGGAGGTGAATTGATTCCAATTACTGGTGTTAATTCAGTACAGGCTGATGTTGAAATTTCATTTGAAGTGAAAGATTTTGGAAAGGCCGAATTATTGGACAAATGGATAGATCCCCAAATTTTGTGTAGTCAAAAGGGTGCATCAGTAAAAGGTGGTGTTGGACCATTTGGTCTGCACGTGCTTGCTTCTAAAGGCTTGCAAGAGTACACAGCAGTATTTTTTAGAATATTCAGATATCAACATAAGAATTTGGTTCTCATGTGCAGCGATCAAAGCAGGTCATCTTTGAATAAAGAGAATGATATGACCACATATGGGACTTTTGTGGATGTTGACCCACTTCATGAGAAGCTGTCACTAAGAACTTTGATTGACCATTCAGTGGTGGAGAGTTTTGGTGGAGAAGGAAGAGCTTGCATCACAGCTAGAGTTTATCCTACATTAGCAATCCATGATAAGGCTTTGTTATATGCTTTCAATAATGGAAATTCTGCAGTCAAGATCACAAGATTGAATGCTTGGAGCATGAAGAAAGCAAAAATCAACTAA

Protein sequence

>MsG0280011203.01.T01

MRYGGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIHPSQPSDIKGCWSGSATILPGGKPAILYTGIDPNNHQVQNIAIPKNMSDPLLREWKKSPKNPLMEPTVANKINASSFRDPTTSWLGKDGYWRVLIGSKIHRKGIAIMYKSKNFVDWVEAKHPLHSAEGTGMWECPDFFPVLNKNPLTIGLDTSMNGDDVKHVLKVSLDDTKHDHYLIGTYDTVKDVFVPDNGFEDNQNVLRYDYGKYYASKTFFDDGKNRRILLGWANESSSVVDDVKKGWSGIHTIPRAIWLHKSGKQLVQWPVKELENLRMNPVNWPTKVIKGGELIPITGVNSVQADVEISFEVKDFGKAELLDKWIDPQILCSQKGASVKGGVGPFGLHVLASKGLQEYTAVFFRIFRYQHKNLVLMCSDQSRSSLNKENDMTTYGTFVDVDPLHEKLSLRTLIDHSVVESFGGEGRACITARVYPTLAIHDKALLYAFNNGNSAVKITRLNAWSMKKAKIN*