AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580030133.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030133.01.T01 MTR_5g097910 87.029 239 12 3 245 464 38 276 4.89e-135 392
MsG0580030133.01.T01 MTR_5g097910 78.467 274 26 4 1 241 1 274 8.41e-132 384
MsG0580030133.01.T01 MTR_5g097940 87.029 239 12 3 245 464 38 276 4.89e-135 392
MsG0580030133.01.T01 MTR_5g097940 78.467 274 26 4 1 241 1 274 8.41e-132 384
MsG0580030133.01.T01 MTR_5g097900 87.029 239 12 3 245 464 38 276 6.71e-135 391
MsG0580030133.01.T01 MTR_5g097900 78.467 274 26 4 1 241 1 274 1.10e-131 383
MsG0580030133.01.T01 MTR_3g083130 63.136 236 68 1 245 461 39 274 1.86e-103 311
MsG0580030133.01.T01 MTR_3g083130 52.768 271 94 5 6 242 7 277 2.30e-90 278
MsG0580030133.01.T01 MTR_0374s0050 57.787 244 83 4 238 461 32 275 6.56e-90 276
MsG0580030133.01.T01 MTR_0374s0050 48.201 278 108 7 1 242 1 278 6.50e-78 246
MsG0580030133.01.T01 MTR_4g072320 51.709 234 93 3 248 461 33 266 2.21e-70 226
MsG0580030133.01.T01 MTR_4g072320 41.516 277 119 7 1 242 1 269 5.10e-58 194
MsG0580030133.01.T01 MTR_4g072360 49.138 232 98 3 248 459 39 270 6.56e-68 220
MsG0580030133.01.T01 MTR_4g072360 39.928 278 128 7 1 242 1 275 8.29e-55 186
MsG0580030133.01.T01 MTR_4g072350 49.573 234 98 4 248 461 39 272 2.27e-66 216
MsG0580030133.01.T01 MTR_4g072350 41.667 264 118 6 15 242 12 275 1.14e-54 186
MsG0580030133.01.T01 MTR_6g073110 47.660 235 103 4 247 461 38 272 1.32e-64 211
MsG0580030133.01.T01 MTR_6g073110 40.502 279 125 8 1 242 1 275 1.98e-53 182
MsG0580030133.01.T01 MTR_8g070095 39.831 236 121 3 246 461 35 269 3.40e-50 174
MsG0580030133.01.T01 MTR_8g070095 33.205 259 135 5 19 241 15 271 1.30e-35 134
MsG0580030133.01.T01 MTR_4g036845 37.354 257 137 5 223 461 15 265 4.61e-49 171
MsG0580030133.01.T01 MTR_4g036845 34.109 258 134 7 18 241 12 267 4.61e-40 146
MsG0580030133.01.T01 MTR_8g070115 40.708 226 113 3 255 461 42 265 2.28e-47 166
MsG0580030133.01.T01 MTR_8g070115 33.579 271 132 7 19 250 15 276 7.01e-31 121
MsG0580030133.01.T01 MTR_7g063580 39.286 224 116 2 256 461 83 304 7.73e-46 163
MsG0580030133.01.T01 MTR_7g063580 33.480 227 114 6 49 241 83 306 1.10e-29 119
MsG0580030133.01.T01 MTR_4g021450 35.789 285 134 6 196 461 1 255 3.06e-43 155
MsG0580030133.01.T01 MTR_4g021450 33.210 271 140 7 19 259 16 275 1.98e-24 103
MsG0580030133.01.T01 MTR_4g021410 35.662 272 126 6 209 461 14 255 3.53e-42 152
MsG0580030133.01.T01 MTR_4g021410 33.099 284 143 7 19 269 16 285 6.90e-27 110
MsG0580030133.01.T01 MTR_4g021350 37.021 235 123 4 247 461 34 263 2.84e-41 149
MsG0580030133.01.T01 MTR_4g021350 33.333 267 136 7 19 250 15 274 2.56e-26 108
MsG0580030133.01.T01 MTR_4g021350 37.021 235 123 4 247 461 34 263 7.94e-41 149
MsG0580030133.01.T01 MTR_4g021350 33.333 267 136 7 19 250 15 274 4.87e-26 108
MsG0580030133.01.T01 MTR_4g021410 40.444 225 104 4 255 461 6 218 9.26e-40 144
MsG0580030133.01.T01 MTR_4g021410 32.296 257 135 5 48 274 6 253 1.04e-23 100
MsG0580030133.01.T01 MTR_7g070500 37.288 236 123 6 247 464 44 272 3.55e-37 138
MsG0580030133.01.T01 MTR_7g070500 31.496 254 137 8 20 241 23 271 1.31e-25 106
MsG0580030133.01.T01 MTR_7g070500 37.288 236 123 6 247 464 44 272 6.96e-37 138
MsG0580030133.01.T01 MTR_7g070500 31.496 254 137 8 20 241 23 271 2.48e-25 106
MsG0580030133.01.T01 MTR_4g072060 33.603 247 137 4 242 461 24 270 1.27e-35 134
MsG0580030133.01.T01 MTR_4g072060 35.055 271 130 8 15 242 6 273 4.36e-30 119
MsG0580030133.01.T01 MTR_4g021410 42.208 154 77 2 308 461 38 179 9.55e-32 121
MsG0580030133.01.T01 MTR_4g021410 29.596 223 118 5 82 274 1 214 2.84e-11 63.5
MsG0580030133.01.T01 MTR_4g021450 42.208 154 77 2 308 461 38 179 6.43e-31 119
MsG0580030133.01.T01 MTR_4g021450 45.385 130 68 1 332 461 10 136 1.48e-29 114
MsG0580030133.01.T01 MTR_6g072710 44.706 85 42 2 380 461 1 83 4.27e-16 74.7
MsG0580030133.01.T01 MTR_6g072710 45.000 60 33 0 183 242 27 86 1.60e-11 61.6
MsG0580030133.01.T01 MTR_6g072650 44.000 100 29 3 365 461 13 88 8.48e-16 74.7
MsG0580030133.01.T01 MTR_3g449790 25.357 280 131 10 238 462 70 326 1.38e-12 69.3
MsG0580030133.01.T01 MTR_3g449790 24.828 290 134 11 238 466 70 336 2.70e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030133.01.T01 AT1G59960 53.165 237 91 4 245 461 40 276 5.24e-81 254
MsG0580030133.01.T01 AT1G59960 43.262 282 117 9 1 242 1 279 5.73e-66 215
MsG0580030133.01.T01 AT1G59950 52.743 237 92 4 245 461 34 270 1.14e-72 232
MsG0580030133.01.T01 AT1G59950 44.526 274 110 8 20 254 15 285 1.11e-57 193
MsG0580030133.01.T01 AT5G62420 43.534 232 111 4 247 459 34 264 4.20e-55 186
MsG0580030133.01.T01 AT5G62420 38.760 258 117 7 20 240 14 267 1.90e-44 158
MsG0580030133.01.T01 AT2G37790 40.426 235 119 3 246 461 33 265 1.05e-51 177
MsG0580030133.01.T01 AT2G37790 34.100 261 126 7 19 241 15 267 5.24e-37 138
MsG0580030133.01.T01 AT2G37770 41.277 235 117 3 246 461 33 265 1.79e-51 177
MsG0580030133.01.T01 AT2G37770 34.601 263 124 7 19 242 15 268 8.84e-37 137
MsG0580030133.01.T01 AT2G37760 41.949 236 112 5 247 461 30 261 2.52e-48 168
MsG0580030133.01.T01 AT2G37760 34.211 266 115 8 19 241 15 263 5.09e-36 135
MsG0580030133.01.T01 AT2G37760 41.949 236 112 5 247 461 30 261 2.52e-48 168
MsG0580030133.01.T01 AT2G37760 34.211 266 115 8 19 241 15 263 5.09e-36 135
MsG0580030133.01.T01 AT2G37760 41.949 236 112 5 247 461 30 261 3.19e-48 167
MsG0580030133.01.T01 AT2G37760 34.211 266 115 8 19 241 15 263 5.72e-36 135
MsG0580030133.01.T01 AT2G37760 41.949 236 112 5 247 461 30 261 7.57e-48 167
MsG0580030133.01.T01 AT2G37760 34.211 266 115 8 19 241 15 263 1.03e-35 135
MsG0580030133.01.T01 AT2G37760 41.949 236 112 5 247 461 30 261 7.57e-48 167
MsG0580030133.01.T01 AT2G37760 34.211 266 115 8 19 241 15 263 1.03e-35 135
MsG0580030133.01.T01 AT3G53880 38.596 228 119 3 253 461 40 265 3.52e-46 163
MsG0580030133.01.T01 AT3G53880 31.783 258 136 6 19 241 15 267 3.97e-29 117
MsG0580030133.01.T01 AT3G53880 38.596 228 119 3 253 461 40 265 3.85e-46 163
MsG0580030133.01.T01 AT3G53880 32.184 261 131 7 19 241 15 267 3.67e-29 117
MsG0580030133.01.T01 AT5G01670 38.462 234 121 5 247 461 41 270 4.70e-45 160
MsG0580030133.01.T01 AT5G01670 35.135 259 131 8 16 242 20 273 6.11e-38 141
MsG0580030133.01.T01 AT2G21260 34.426 244 133 4 245 461 27 270 5.42e-42 152
MsG0580030133.01.T01 AT2G21260 33.224 304 150 9 15 268 6 306 7.95e-41 148
MsG0580030133.01.T01 AT5G01670 34.866 261 120 6 247 461 41 297 3.01e-41 150
MsG0580030133.01.T01 AT5G01670 31.802 283 129 9 19 242 23 300 1.65e-33 129
MsG0580030133.01.T01 AT2G21250 33.197 244 136 4 245 461 27 270 1.93e-40 147
MsG0580030133.01.T01 AT2G21250 32.423 293 145 9 15 257 6 295 4.26e-37 138
MsG0580030133.01.T01 AT2G37770 43.103 174 79 2 246 401 33 204 1.19e-37 139
MsG0580030133.01.T01 AT2G37770 43.671 158 78 4 19 172 15 165 1.68e-31 122
MsG0580030133.01.T01 AT2G37760 39.720 214 104 5 269 461 6 215 1.85e-37 138
MsG0580030133.01.T01 AT2G37760 32.287 223 97 7 62 241 6 217 3.77e-24 101
MsG0580030133.01.T01 AT2G37760 39.720 214 104 5 269 461 6 215 1.85e-37 138
MsG0580030133.01.T01 AT2G37760 32.287 223 97 7 62 241 6 217 3.77e-24 101
MsG0580030133.01.T01 AT2G21250 36.216 185 95 3 245 406 27 211 5.65e-32 122
MsG0580030133.01.T01 AT2G21250 37.383 214 106 7 15 213 6 206 8.20e-31 119
MsG0580030133.01.T01 AT2G21260 32.000 175 108 3 298 461 28 202 8.96e-27 108
MsG0580030133.01.T01 AT1G06690 24.742 291 133 10 238 466 81 347 1.44e-13 72.4

Find 105 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTCTTCAATTGGACTATT+TGG 0.148242 5:-107113344 MsG0580030133.01.T01:CDS
AATCAAAGATACGCAAATTT+TGG 0.165725 5:+107112751 None:intergenic
CAATCAAAGATACACAAATT+TGG 0.261727 5:+107108000 None:intergenic
TTGCATTGCAAAACTCTCTA+AGG 0.274401 5:+107108216 None:intergenic
TAAAATACCAGAAAATAATT+TGG 0.275670 5:+107107727 None:intergenic
CATTTGATGTGAAAGGGTTT+TGG 0.278802 5:-107113243 MsG0580030133.01.T01:CDS
ATTGGAAATGAAAACTTTCC+AGG 0.287256 5:+107108527 None:intergenic
ATTATCAATGTTATTGTATT+GGG 0.287934 5:-107107781 MsG0580030133.01.T01:three_prime_UTR
TGGACTTGTACTTGATTCAT+TGG 0.300645 5:-107108565 MsG0580030133.01.T01:CDS
TGGACTTGTATTTGATTCAT+TGG 0.300948 5:-107113324 MsG0580030133.01.T01:CDS
ATTGGAAATGTAAACTTTCC+AGG 0.312952 5:+107113286 None:intergenic
AATTATCAATGTTATTGTAT+TGG 0.323636 5:-107107782 MsG0580030133.01.T01:three_prime_UTR
GTGTCTATAACCTTGTTTGA+TGG 0.333209 5:+107109002 None:intergenic
GTGTCTATAACCTTGTTTGA+TGG 0.333209 5:+107113636 None:intergenic
AGGCCTGGCTTGGTTGGTCC+AGG 0.344379 5:+107107919 None:intergenic
CAAATTTGTGTATCTTTGAT+TGG 0.355437 5:-107107999 MsG0580030133.01.T01:CDS
TCATTCTCCATAACTTCATT+TGG 0.362803 5:+107112891 None:intergenic
TCTTTCTTACATGTGAAGTC+AGG 0.371382 5:+107113682 None:intergenic
CATTTGATGTGAAAGGTGTT+TGG 0.375654 5:-107108484 MsG0580030133.01.T01:CDS
CTTGGACTCACTAAAGCTAT+TGG 0.375778 5:-107108437 MsG0580030133.01.T01:CDS
CTTGGACTCACTAAAGCTAT+TGG 0.375778 5:-107113196 MsG0580030133.01.T01:CDS
CAAACACCTTTCACATCAAA+TGG 0.378027 5:+107108485 None:intergenic
AAGAGATCTGCCACATCAAT+TGG 0.378807 5:+107108509 None:intergenic
CAAAACCCTTTCACATCAAA+TGG 0.386892 5:+107113244 None:intergenic
TCATTCTCCATAACCTCATT+TGG 0.392662 5:+107108140 None:intergenic
TTGCACAAATTTCTCTAAGA+TGG 0.398611 5:-107108079 MsG0580030133.01.T01:CDS
TCTTTCCTTATCATAACTCT+TGG 0.404407 5:+107108028 None:intergenic
TCTTTCCTTATCATAACTCT+TGG 0.404407 5:+107112779 None:intergenic
TTCATGTAGGACTCTTCAAT+TGG 0.407231 5:-107113353 MsG0580030133.01.T01:intron
CAGAGGACCAAATGAGGTTA+TGG 0.408273 5:-107108147 MsG0580030133.01.T01:CDS
ATTTGATGTGAAAGGTGTTT+GGG 0.418218 5:-107108483 MsG0580030133.01.T01:CDS
AAGAGATCTGCCACATCAAT+TGG 0.421446 5:+107113268 None:intergenic
TTGAAAGAGGCAATTGAACT+TGG 0.422526 5:-107108931 MsG0580030133.01.T01:CDS
TTGAAAGAGGCAATTGAACT+TGG 0.422526 5:-107113565 MsG0580030133.01.T01:CDS
TGTTCCCAAGAGTTATGATA+AGG 0.428240 5:-107108033 MsG0580030133.01.T01:CDS
TGTTCCCAAGAGTTATGATA+AGG 0.428240 5:-107112784 MsG0580030133.01.T01:CDS
TTTGATACTGCTGCTGCCTA+TGG 0.432708 5:-107108979 MsG0580030133.01.T01:CDS
TTTGATACTGCTGCTGCCTA+TGG 0.432708 5:-107113613 MsG0580030133.01.T01:CDS
TCATTGAGGCCTGGCTTGGT+TGG 0.438358 5:+107107913 None:intergenic
CTTTCCTTATCATAACTCTT+GGG 0.442857 5:+107108029 None:intergenic
CTTTCCTTATCATAACTCTT+GGG 0.442857 5:+107112780 None:intergenic
AAGCAAAATCGTTTGATCCC+TGG 0.455139 5:-107107937 MsG0580030133.01.T01:three_prime_UTR
AAAGTTTAGAAGTAACAAAA+AGG 0.467615 5:+107113524 None:intergenic
GACTCTTCAACTAGACTACT+TGG 0.469433 5:-107108585 MsG0580030133.01.T01:CDS
GAGGTCATTGAGGCCTGGCT+TGG 0.476217 5:+107107909 None:intergenic
ATCCCTGGACCAACCAAGCC+AGG 0.483424 5:-107107922 MsG0580030133.01.T01:three_prime_UTR
AAGTTTCAAGCTTTCCTCCA+TGG 0.483539 5:+107108457 None:intergenic
AAGTTTCAAGCTTTCCTCCA+TGG 0.483539 5:+107113216 None:intergenic
GGCCTGGCTTGGTTGGTCCA+GGG 0.485174 5:+107107920 None:intergenic
GCAGGGACCAAATGAAGTTA+TGG 0.486785 5:-107112898 MsG0580030133.01.T01:CDS
TGAATTACTTGATTGACTGC+TGG 0.489360 5:+107108356 None:intergenic
TATGGCTCAGAACAAGCTCT+TGG 0.491850 5:-107108961 MsG0580030133.01.T01:CDS
TATGGCTCAGAACAAGCTCT+TGG 0.491850 5:-107113595 MsG0580030133.01.T01:CDS
TCTTGCCATTTGATGTGAAA+GGG 0.495338 5:-107113249 MsG0580030133.01.T01:CDS
TGTTTGTAAGAACCTTTGTT+GGG 0.496882 5:+107113749 None:intergenic
ATGGAGGAAAGCTTGAAACT+TGG 0.498400 5:-107108455 MsG0580030133.01.T01:CDS
ATGGAGGAAAGCTTGAAACT+TGG 0.498400 5:-107113214 MsG0580030133.01.T01:CDS
TTGCACAAATATCTCTAAGA+TGG 0.499975 5:-107112830 MsG0580030133.01.T01:CDS
CTCTTGCCATTTGATGTGAA+AGG 0.503433 5:-107113250 MsG0580030133.01.T01:CDS
CATTGAGGAAAGGTGCAAGC+AGG 0.506023 5:-107112916 MsG0580030133.01.T01:intron
TCTTGGAGAGGCTTTGAAAG+AGG 0.506147 5:-107108944 MsG0580030133.01.T01:CDS
TCTTGGAGAGGCTTTGAAAG+AGG 0.506147 5:-107113578 MsG0580030133.01.T01:CDS
CTTTCTTACATGTGAAGTCA+GGG 0.506502 5:+107113683 None:intergenic
GTGTTTGTAAGAACCTTTGT+TGG 0.513749 5:+107113748 None:intergenic
CTCTTACCATTTGATGTGAA+AGG 0.516557 5:-107108491 MsG0580030133.01.T01:CDS
CAAAGTTTGGAAGTAACAAA+AGG 0.525407 5:+107108890 None:intergenic
AAGAGCTTGTTCTGAGCCAT+AGG 0.525883 5:+107108963 None:intergenic
AAGAGCTTGTTCTGAGCCAT+AGG 0.525883 5:+107113597 None:intergenic
GAAGATGCCTGTGGTTGGAA+TGG 0.535658 5:-107113713 MsG0580030133.01.T01:CDS
CTAAGATGGCTATATGAACC+AGG 0.545155 5:-107112816 MsG0580030133.01.T01:CDS
TCATAGAGGTCATTGAGGCC+TGG 0.545875 5:+107107904 None:intergenic
TTGGGAACAAAAGTGACTCC+TGG 0.553823 5:+107112798 None:intergenic
AAGATGCCTGTGGTTGGAAT+GGG 0.555328 5:-107113712 MsG0580030133.01.T01:CDS
CTGACATTTAGTCATCATAG+AGG 0.564328 5:+107107890 None:intergenic
ATTGAGGAAAGGTGCAAGCA+GGG 0.584060 5:-107112915 MsG0580030133.01.T01:intron
TGACTTACTTGATTGACTGC+AGG 0.586505 5:+107113116 None:intergenic
GCTGATCCCATTCCAACCAC+AGG 0.587516 5:+107113706 None:intergenic
ATCATTGAAGCCATCAAACA+AGG 0.587661 5:-107109012 MsG0580030133.01.T01:CDS
ATCATTGAAGCCATCAAACA+AGG 0.587661 5:-107113646 MsG0580030133.01.T01:CDS
GAAAGGTGTTTGGGAATCCA+TGG 0.587744 5:-107108474 MsG0580030133.01.T01:CDS
AGCAGGAATAACAATGAGGA+TGG 0.587958 5:+107113489 None:intergenic
CTAAGATGGCTATATGAACA+AGG 0.588672 5:-107108065 MsG0580030133.01.T01:CDS
CTGCTTGCACCTTTCCTCAA+CGG 0.589452 5:+107108167 None:intergenic
AGGTGGAGATGAACCTTGCA+TGG 0.591438 5:-107108250 MsG0580030133.01.T01:CDS
TGCAAGCAGAGGACCAAATG+AGG 0.592065 5:-107108153 MsG0580030133.01.T01:CDS
AGTCATCATAGAGGTCATTG+AGG 0.605914 5:+107107899 None:intergenic
GTTTACATTTCCAATTGATG+TGG 0.608506 5:-107113278 MsG0580030133.01.T01:CDS
TTTCTTACATGTGAAGTCAG+GGG 0.620409 5:+107113684 None:intergenic
CAATTGAAGATGCCTGTGGT+TGG 0.621459 5:-107113718 MsG0580030133.01.T01:CDS
TGGCCACTTAGTTCTCAACC+TGG 0.621982 5:-107108545 MsG0580030133.01.T01:CDS
TGGCCACTTAGTTCTCAACC+TGG 0.621982 5:-107113304 MsG0580030133.01.T01:CDS
TTCAAAGCTCGAAAGAAACA+AGG 0.626557 5:+107107803 None:intergenic
TTTCCAGGTTGAGAACTAAG+TGG 0.629025 5:+107108542 None:intergenic
TTTCCAGGTTGAGAACTAAG+TGG 0.629025 5:+107113301 None:intergenic
AAAGAGATTGCAGATGCACA+TGG 0.633321 5:-107108110 MsG0580030133.01.T01:CDS
AAAGAGATTGCAGATGCACA+TGG 0.633321 5:-107112861 MsG0580030133.01.T01:CDS
CTCAGAACAAGCTCTTGGAG+AGG 0.635937 5:-107108956 MsG0580030133.01.T01:CDS
CTCAGAACAAGCTCTTGGAG+AGG 0.635937 5:-107113590 MsG0580030133.01.T01:CDS
TAGTCAATTGAAGATGCCTG+TGG 0.637967 5:-107113722 MsG0580030133.01.T01:CDS
TTGAGGAAAGGTGCAAGCAG+AGG 0.639249 5:-107108164 MsG0580030133.01.T01:CDS
GAAGAGCAGGAATAACAATG+AGG 0.646927 5:+107113485 None:intergenic
TAGTGTTGAAATCCCAACAA+AGG 0.659490 5:-107113761 MsG0580030133.01.T01:CDS
ATTGACTGCAGGAAGAACAG+TGG 0.718468 5:+107113127 None:intergenic
AGGTGTTTGGGAATCCATGG+AGG 0.719619 5:-107108471 MsG0580030133.01.T01:CDS
ATTGACTGCTGGAAGAACAG+TGG 0.720759 5:+107108367 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATAAAATATCAAATAAAA+AGG - Chr5:107112102-107112121 MsG0580030133.01.T01:intron 10.0%
!!! ATAGAAATTGATATTTTTAA+TGG - Chr5:107110955-107110974 MsG0580030133.01.T01:intron 10.0%
!!! GTTTTTAATTTTTTATTTAC+AGG - Chr5:107110200-107110219 MsG0580030133.01.T01:intron 10.0%
!!! TATTTTTAAATATCAAACTT+CGG + Chr5:107109174-107109193 None:intergenic 10.0%
!! AAACCTATTAAAATTAAGTA+AGG + Chr5:107111348-107111367 None:intergenic 15.0%
!! AAATCACTTATTTAAATAGA+AGG + Chr5:107110378-107110397 None:intergenic 15.0%
!! AATCACTTATTTAAATAGAA+GGG + Chr5:107110377-107110396 None:intergenic 15.0%
!! AATTATCAATGTTATTGTAT+TGG - Chr5:107113722-107113741 MsG0580030133.01.T01:CDS 15.0%
!! AGAACTATTAAAATTAAGTA+AGG - Chr5:107111753-107111772 MsG0580030133.01.T01:intron 15.0%
!! ATATCAATATTACATTCATT+TGG - Chr5:107108075-107108094 MsG0580030133.01.T01:CDS 15.0%
!! ATTATCAATGTTATTGTATT+GGG - Chr5:107113723-107113742 MsG0580030133.01.T01:CDS 15.0%
!! ATTTATTTGAATATACAAAG+AGG - Chr5:107110169-107110188 MsG0580030133.01.T01:intron 15.0%
!! CCAAAAAAAAAAATATTTAC+AGG - Chr5:107110774-107110793 MsG0580030133.01.T01:intron 15.0%
!! CTAAAAATTAATCTAAACTT+AGG + Chr5:107108423-107108442 None:intergenic 15.0%
!! GTATAATTAAATTATAGCAA+AGG + Chr5:107109356-107109375 None:intergenic 15.0%
!! TAAAATACCAGAAAATAATT+TGG + Chr5:107113780-107113799 None:intergenic 15.0%
!! TAAAATATCAAATAAAAAGG+TGG - Chr5:107112105-107112124 MsG0580030133.01.T01:intron 15.0%
!! TACACTTAATAAATTCATAT+AGG - Chr5:107109406-107109425 MsG0580030133.01.T01:intron 15.0%
!! TGTTTATATTTATGAATCAT+TGG + Chr5:107109301-107109320 None:intergenic 15.0%
!! TTTAATATAGTCATATTTGT+AGG - Chr5:107110611-107110630 MsG0580030133.01.T01:intron 15.0%
!! TTTATTTGAATATACAAAGA+GGG - Chr5:107110170-107110189 MsG0580030133.01.T01:intron 15.0%
!!! AATTAAACAGATAGATTTTA+AGG + Chr5:107108908-107108927 None:intergenic 15.0%
!!! AATTAGAAGTAATTTTTTGT+AGG + Chr5:107111379-107111398 None:intergenic 15.0%
!!! ATTAGAAGTAATTTTTTGTA+GGG + Chr5:107111378-107111397 None:intergenic 15.0%
!!! ATTTGTTCTTTTTAGATTAA+GGG - Chr5:107109053-107109072 MsG0580030133.01.T01:intron 15.0%
!!! CCTGTAAATATTTTTTTTTT+TGG + Chr5:107110777-107110796 None:intergenic 15.0%
!!! TATTTGTTCTTTTTAGATTA+AGG - Chr5:107109052-107109071 MsG0580030133.01.T01:intron 15.0%
!!! TTAAGAATCTTATATTTTGA+TGG + Chr5:107109135-107109154 None:intergenic 15.0%
!!! TTAGATGTTTTTTTTTTTGA+AGG + Chr5:107109786-107109805 None:intergenic 15.0%
!! AAACAACTTATATTCAAAGT+TGG + Chr5:107112054-107112073 None:intergenic 20.0%
!! AAAGTTTAGAAGTAACAAAA+AGG + Chr5:107107983-107108002 None:intergenic 20.0%
!! AACAAAAATAACAACAACAT+GGG - Chr5:107112356-107112375 MsG0580030133.01.T01:intron 20.0%
!! AACAACAAAAAAAACAACAT+GGG - Chr5:107107720-107107739 MsG0580030133.01.T01:three_prime_UTR 20.0%
!! AAGAAGAAAAACAATTTAGA+GGG + Chr5:107110354-107110373 None:intergenic 20.0%
!! ACTGCTAGTAAAATTAAAAA+GGG - Chr5:107111274-107111293 MsG0580030133.01.T01:intron 20.0%
!! AGTACTAATGTAAAATAACT+TGG + Chr5:107109013-107109032 None:intergenic 20.0%
!! TATGACTATATTAAAATCTC+CGG + Chr5:107110606-107110625 None:intergenic 20.0%
!! TCCAATAATTAAAAAGATAG+AGG - Chr5:107111937-107111956 MsG0580030133.01.T01:intron 20.0%
!! TTAATAAATTCATATAGGCA+AGG - Chr5:107109411-107109430 MsG0580030133.01.T01:intron 20.0%
!! TTATTTGAATATACAAAGAG+GGG - Chr5:107110171-107110190 MsG0580030133.01.T01:intron 20.0%
!!! AAAAGGGTTAAATATGTTTT+TGG - Chr5:107111290-107111309 MsG0580030133.01.T01:intron 20.0%
!!! AGTCCTTACTTAATTTTAAT+AGG - Chr5:107111342-107111361 MsG0580030133.01.T01:intron 20.0%
!!! ATCATTACTCTTTTTAATGA+TGG - Chr5:107111150-107111169 MsG0580030133.01.T01:intron 20.0%
!!! ATGTTGTTTTTTTTGTTGTT+GGG + Chr5:107107720-107107739 None:intergenic 20.0%
!!! ATTTTCTCCAAATTATTTTC+TGG - Chr5:107113770-107113789 MsG0580030133.01.T01:exon 20.0%
!!! CAACTTTTAGCTATATAAAA+AGG - Chr5:107112251-107112270 MsG0580030133.01.T01:intron 20.0%
!!! CTTTTTATATAGCTAAAAGT+TGG + Chr5:107112253-107112272 None:intergenic 20.0%
!!! GCGATAAAAATGAAAAATTT+TGG - Chr5:107109888-107109907 MsG0580030133.01.T01:intron 20.0%
!!! TAATTGGGTTAAATATGTTT+TGG + Chr5:107111810-107111829 None:intergenic 20.0%
!!! TATTTTTTTAGTCATCATAG+AGG + Chr5:107108865-107108884 None:intergenic 20.0%
!!! TCTATCTTTTTAATTATTGG+AGG + Chr5:107111938-107111957 None:intergenic 20.0%
!!! TTAAAAGTTCCCAATTTTAT+AGG + Chr5:107111318-107111337 None:intergenic 20.0%
!!! TTAAAGATCCCAATTTTATA+GGG - Chr5:107111783-107111802 MsG0580030133.01.T01:intron 20.0%
!!! TTAGAAGTAATTTTTTGTAG+GGG + Chr5:107111377-107111396 None:intergenic 20.0%
!!! TTATTTTTGTTGTTGTTGTT+GGG + Chr5:107112347-107112366 None:intergenic 20.0%
!!! TTGATTTGTTAATTTCATGT+AGG - Chr5:107108138-107108157 MsG0580030133.01.T01:CDS 20.0%
!!! TTTGTTCTTTTTAGATTAAG+GGG - Chr5:107109054-107109073 MsG0580030133.01.T01:intron 20.0%
!!! TTTTGTTACTTCTAAACTTT+GGG - Chr5:107107983-107108002 MsG0580030133.01.T01:exon 20.0%
!!! TTTTTGGTTCCTATAAAATT+GGG - Chr5:107111306-107111325 MsG0580030133.01.T01:intron 20.0%
!!! TTTTTGTTACTTCTAAACTT+TGG - Chr5:107107982-107108001 MsG0580030133.01.T01:exon 20.0%
! AAAATTTGCGTATCTTTGAT+TGG - Chr5:107108755-107108774 MsG0580030133.01.T01:intron 25.0%
! AGAAGAAAAACAATTTAGAG+GGG + Chr5:107110353-107110372 None:intergenic 25.0%
! ATAATTAAAAAGATAGAGGC+AGG - Chr5:107111941-107111960 MsG0580030133.01.T01:intron 25.0%
! CAAATTCGCTAAAAACAAAA+AGG + Chr5:107110699-107110718 None:intergenic 25.0%
! CAAATTTGTGTATCTTTGAT+TGG - Chr5:107113505-107113524 MsG0580030133.01.T01:CDS 25.0%
! CAACAAAAATAACAACAACA+TGG - Chr5:107112355-107112374 MsG0580030133.01.T01:intron 25.0%
! CAACAACAAAAAAAACAACA+TGG - Chr5:107107719-107107738 MsG0580030133.01.T01:three_prime_UTR 25.0%
! CAAGAAGTTAATCAAAACTT+AGG + Chr5:107113183-107113202 None:intergenic 25.0%
! CAATATAGAGAAGATTATAG+AGG + Chr5:107109591-107109610 None:intergenic 25.0%
! CAATCAAAGATACACAAATT+TGG + Chr5:107113507-107113526 None:intergenic 25.0%
! CAATGAACTCATAAATGTAT+AGG - Chr5:107108484-107108503 MsG0580030133.01.T01:CDS 25.0%
! CAATGAACTCATATATTTAC+AGG - Chr5:107113234-107113253 MsG0580030133.01.T01:CDS 25.0%
! CTCTATAATCTTCTCTATAT+TGG - Chr5:107109589-107109608 MsG0580030133.01.T01:intron 25.0%
! GAAGAAGAAAAACAATTTAG+AGG + Chr5:107110355-107110374 None:intergenic 25.0%
! GACTGCTAGTAAAATTAAAA+AGG - Chr5:107111273-107111292 MsG0580030133.01.T01:intron 25.0%
! GGTTCAAATTCTGATTTAAA+AGG + Chr5:107110879-107110898 None:intergenic 25.0%
! TAAACAAATTTGAATTGACG+AGG - Chr5:107111693-107111712 MsG0580030133.01.T01:intron 25.0%
! TAATTAAAAAGATAGAGGCA+GGG - Chr5:107111942-107111961 MsG0580030133.01.T01:intron 25.0%
! TCAACAAAGTTGTCATTAAA+TGG - Chr5:107111117-107111136 MsG0580030133.01.T01:intron 25.0%
! TCAATATTACATTCATTTGG+AGG - Chr5:107108078-107108097 MsG0580030133.01.T01:CDS 25.0%
! TCCATGTTAATAGCATAAAA+CGG + Chr5:107110650-107110669 None:intergenic 25.0%
! TCTTTAATTATCTCTTCTCA+TGG - Chr5:107109626-107109645 MsG0580030133.01.T01:intron 25.0%
! TGTATGTCAATTGCAAAAAT+TGG - Chr5:107109861-107109880 MsG0580030133.01.T01:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + Chr5:107111080-107111099 None:intergenic 25.0%
!! AAACAAACTTTGTTGTAACA+GGG + Chr5:107111407-107111426 None:intergenic 25.0%
!! AACGTTCACTAATTTTACAA+CGG + Chr5:107109465-107109484 None:intergenic 25.0%
!! AATCAAAGATACGCAAATTT+TGG + Chr5:107108756-107108775 None:intergenic 25.0%
!! AGTGATTTTCACATTGAATT+AGG - Chr5:107110390-107110409 MsG0580030133.01.T01:intron 25.0%
!! CTTAAAGATCCCAATTTTAT+AGG - Chr5:107111782-107111801 MsG0580030133.01.T01:intron 25.0%
!! TAAACAAACTTTGTTGTAAC+AGG + Chr5:107111408-107111427 None:intergenic 25.0%
!! TGATTGTCAAATTTGACTTA+AGG + Chr5:107109734-107109753 None:intergenic 25.0%
!!! CATGTTGTTTTTTTTGTTGT+TGG + Chr5:107107721-107107740 None:intergenic 25.0%
!!! GATTTTAAGGCAAACTTAAA+AGG + Chr5:107108895-107108914 None:intergenic 25.0%
!!! GCCTCTATCTTTTTAATTAT+TGG + Chr5:107111941-107111960 None:intergenic 25.0%
!!! GTTATTTTTGTTGTTGTTGT+TGG + Chr5:107112348-107112367 None:intergenic 25.0%
!!! GTTTTTGGTTCCTATAAAAT+TGG - Chr5:107111305-107111324 MsG0580030133.01.T01:intron 25.0%
!!! TTTGTTTTCTCACTTCTTAT+TGG + Chr5:107111093-107111112 None:intergenic 25.0%
!!! TTTTGTTACTTCCAAACTTT+GGG - Chr5:107112616-107112635 MsG0580030133.01.T01:intron 25.0%
AAAACAATGGAGAGAGAAAA+AGG + Chr5:107111067-107111086 None:intergenic 30.0%
AACAACTGTATACTGCTAAT+TGG + Chr5:107111910-107111929 None:intergenic 30.0%
AACCTTGATTCATCTTATTG+TGG - Chr5:107110895-107110914 MsG0580030133.01.T01:intron 30.0%
ACCTTGATTCATCTTATTGT+GGG - Chr5:107110896-107110915 MsG0580030133.01.T01:intron 30.0%
ACTGAATGCAGGAAAAAAAT+AGG - Chr5:107111723-107111742 MsG0580030133.01.T01:intron 30.0%
ATAATAAGTTTCTTCCATCG+AGG - Chr5:107110814-107110833 MsG0580030133.01.T01:intron 30.0%
ATTCGCTAAAAACAAAAAGG+AGG + Chr5:107110696-107110715 None:intergenic 30.0%
ATTGGAAATGAAAACTTTCC+AGG + Chr5:107112980-107112999 None:intergenic 30.0%
ATTGGAAATGTAAACTTTCC+AGG + Chr5:107108221-107108240 None:intergenic 30.0%
CAAACTCGTTTCAAAAACAA+GGG + Chr5:107108963-107108982 None:intergenic 30.0%
CAAAGTTTGGAAGTAACAAA+AGG + Chr5:107112617-107112636 None:intergenic 30.0%
CATGCAGATTAATCTGAAAA+TGG - Chr5:107111988-107112007 MsG0580030133.01.T01:intron 30.0%
CTGAATGCAGGAAAAAAATA+GGG - Chr5:107111724-107111743 MsG0580030133.01.T01:intron 30.0%
CTTTCCTTATCATAACTCTT+GGG + Chr5:107108727-107108746 None:intergenic 30.0%
GTCCAATTAATTATGCTTCA+AGG + Chr5:107109334-107109353 None:intergenic 30.0%
GTTTACATTTCCAATTGATG+TGG - Chr5:107108226-107108245 MsG0580030133.01.T01:CDS 30.0%
TATATTCAAAGTTGGCGAAT+GGG + Chr5:107112046-107112065 None:intergenic 30.0%
TCAAACTCGTTTCAAAAACA+AGG + Chr5:107108964-107108983 None:intergenic 30.0%
TCATTCTCCATAACTTCATT+TGG + Chr5:107108616-107108635 None:intergenic 30.0%
TCTTTCCTTATCATAACTCT+TGG + Chr5:107108728-107108747 None:intergenic 30.0%
TGAACTCATAAATGTATAGG+TGG - Chr5:107108487-107108506 MsG0580030133.01.T01:CDS 30.0%
TGAACTCATATATTTACAGG+TGG - Chr5:107113237-107113256 MsG0580030133.01.T01:CDS 30.0%
TGCCTTGAAGCATAATTAAT+TGG - Chr5:107109329-107109348 MsG0580030133.01.T01:intron 30.0%
TGGACTTGTATTTGATTCAT+TGG - Chr5:107108180-107108199 MsG0580030133.01.T01:CDS 30.0%
TGTTTGTAAGAACCTTTGTT+GGG + Chr5:107107758-107107777 None:intergenic 30.0%
TTAGTGTATGTGTATTGAGA+GGG - Chr5:107109970-107109989 MsG0580030133.01.T01:intron 30.0%
TTATATTCAAAGTTGGCGAA+TGG + Chr5:107112047-107112066 None:intergenic 30.0%
! AAGTGTAGTAACGTTTTTGA+CGG + Chr5:107109393-107109412 None:intergenic 30.0%
! ACGTTCACTAATTTTACAAC+GGG + Chr5:107109464-107109483 None:intergenic 30.0%
! ATTTCCTCTGAAGATACAAT+TGG + Chr5:107109939-107109958 None:intergenic 30.0%
! ATTTGATGTGAAAGGGTTTT+GGG - Chr5:107108262-107108281 MsG0580030133.01.T01:intron 30.0%
! ATTTTCAGTAACCCAAAGTT+TGG + Chr5:107112630-107112649 None:intergenic 30.0%
! GTTTTCATTTCCAATTGATG+TGG - Chr5:107112985-107113004 MsG0580030133.01.T01:intron 30.0%
! TTGCACAAATATCTCTAAGA+TGG - Chr5:107108674-107108693 MsG0580030133.01.T01:intron 30.0%
! TTGCACAAATTTCTCTAAGA+TGG - Chr5:107113425-107113444 MsG0580030133.01.T01:intron 30.0%
! TTTTCAGATTAATCTGCATG+TGG + Chr5:107111988-107112007 None:intergenic 30.0%
!! ATTTGATGTGAAAGGTGTTT+GGG - Chr5:107113021-107113040 MsG0580030133.01.T01:intron 30.0%
!! CTTTTGTTACTTCCAAACTT+TGG - Chr5:107112615-107112634 MsG0580030133.01.T01:intron 30.0%
!! GTTTTGGTCCCTATAAAATT+GGG + Chr5:107111794-107111813 None:intergenic 30.0%
!!! AACCACTTTTTGACAACTTT+TGG - Chr5:107110995-107111014 MsG0580030133.01.T01:intron 30.0%
!!! GAAATTAGGGTTTTAGCTAA+CGG + Chr5:107110275-107110294 None:intergenic 30.0%
!!! GTTTTTTTTGTTGTTGGGTT+GGG + Chr5:107107715-107107734 None:intergenic 30.0%
!!! TCCAATTTGGAGTTTTTTGA+GGG + Chr5:107112168-107112187 None:intergenic 30.0%
!!! TGTTTTGGTCCCTATAAAAT+TGG + Chr5:107111795-107111814 None:intergenic 30.0%
!!! TGTTTTTTTTGTTGTTGGGT+TGG + Chr5:107107716-107107735 None:intergenic 30.0%
!!! TTGTTGTTTCTTTTGAGCTT+GGG - Chr5:107108933-107108952 MsG0580030133.01.T01:CDS 30.0%
!!! TTTGCGACAATTTTTTGCAA+AGG - Chr5:107111602-107111621 MsG0580030133.01.T01:intron 30.0%
AACAATTTAGAGGGGTGATT+TGG + Chr5:107110345-107110364 None:intergenic 35.0%
AACTCTTTCAAGCATGAACT+AGG + Chr5:107109685-107109704 None:intergenic 35.0%
ACAATTTAGAGGGGTGATTT+GGG + Chr5:107110344-107110363 None:intergenic 35.0%
ACCCTCAAAAAACTCCAAAT+TGG - Chr5:107112164-107112183 MsG0580030133.01.T01:intron 35.0%
AGTTCCAATTGTATCTTCAG+AGG - Chr5:107109932-107109951 MsG0580030133.01.T01:intron 35.0%
ATCATTGAAGCCATCAAACA+AGG - Chr5:107107858-107107877 MsG0580030133.01.T01:three_prime_UTR 35.0%
CAAAACCCTTTCACATCAAA+TGG + Chr5:107108263-107108282 None:intergenic 35.0%
CAAACACCTTTCACATCAAA+TGG + Chr5:107113022-107113041 None:intergenic 35.0%
CAAAGATACATAGACATCGT+TGG - Chr5:107112012-107112031 MsG0580030133.01.T01:intron 35.0%
CTAAGATGGCTATATGAACA+AGG - Chr5:107113439-107113458 MsG0580030133.01.T01:intron 35.0%
CTATGAGCTATGTTTGATGA+TGG + Chr5:107112295-107112314 None:intergenic 35.0%
CTCTTACCATTTGATGTGAA+AGG - Chr5:107113013-107113032 MsG0580030133.01.T01:intron 35.0%
CTCTTGTTCAGGTGTTTATT+CGG - Chr5:107110491-107110510 MsG0580030133.01.T01:intron 35.0%
CTGACATTTAGTCATCATAG+AGG + Chr5:107113617-107113636 None:intergenic 35.0%
CTTAGTGTATGTGTATTGAG+AGG - Chr5:107109969-107109988 MsG0580030133.01.T01:intron 35.0%
CTTTCTTACATGTGAAGTCA+GGG + Chr5:107107824-107107843 None:intergenic 35.0%
GAATAAACACCTGAACAAGA+GGG + Chr5:107110492-107110511 None:intergenic 35.0%
GACTCTTCAATTGGACTATT+TGG - Chr5:107108160-107108179 MsG0580030133.01.T01:CDS 35.0%
GCTTGAATAACAACTTCTCA+AGG - Chr5:107109827-107109846 MsG0580030133.01.T01:intron 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG + Chr5:107111000-107111019 None:intergenic 35.0%
GTGTTTGTAAGAACCTTTGT+TGG + Chr5:107107759-107107778 None:intergenic 35.0%
TAAGACGACGAAATCACAAA+AGG + Chr5:107110420-107110439 None:intergenic 35.0%
TACAATTGGAACTCTGAACA+AGG + Chr5:107109925-107109944 None:intergenic 35.0%
TATTGACACTAGTAGTAGGA+AGG + Chr5:107109253-107109272 None:intergenic 35.0%
TCATTCTCCATAACCTCATT+TGG + Chr5:107113367-107113386 None:intergenic 35.0%
TCCCACAATAAGATGAATCA+AGG + Chr5:107110900-107110919 None:intergenic 35.0%
TCGAATAAGATTATCCTCGA+TGG + Chr5:107110831-107110850 None:intergenic 35.0%
TCTTTCTTACATGTGAAGTC+AGG + Chr5:107107825-107107844 None:intergenic 35.0%
TGAATTACTTGATTGACTGC+TGG + Chr5:107113151-107113170 None:intergenic 35.0%
TGGACTTGTACTTGATTCAT+TGG - Chr5:107112939-107112958 MsG0580030133.01.T01:intron 35.0%
TGGATGAAGGAGAGAAATTA+GGG + Chr5:107110288-107110307 None:intergenic 35.0%
TGTTCCCAAGAGTTATGATA+AGG - Chr5:107108720-107108739 MsG0580030133.01.T01:intron 35.0%
TTCAAAGCTCGAAAGAAACA+AGG + Chr5:107113704-107113723 None:intergenic 35.0%
TTCATGTAGGACTCTTCAAT+TGG - Chr5:107108151-107108170 MsG0580030133.01.T01:CDS 35.0%
TTGAAAGAGGCAATTGAACT+TGG - Chr5:107107939-107107958 MsG0580030133.01.T01:three_prime_UTR 35.0%
TTGCATTGCAAAACTCTCTA+AGG + Chr5:107113291-107113310 None:intergenic 35.0%
TTGTATGATGTGTGTCATGT+GGG + Chr5:107110067-107110086 None:intergenic 35.0%
TTTCCTCAATGGTGAAAATG+CGG + Chr5:107108579-107108598 None:intergenic 35.0%
TTTCTTACATGTGAAGTCAG+GGG + Chr5:107107823-107107842 None:intergenic 35.0%
! AGAGAGTTTTGCAATGCAAA+TGG - Chr5:107113292-107113311 MsG0580030133.01.T01:CDS 35.0%
! CATTTGATGTGAAAGGGTTT+TGG - Chr5:107108261-107108280 MsG0580030133.01.T01:intron 35.0%
! CTTTGATTGGTCATTGACAA+AGG - Chr5:107108768-107108787 MsG0580030133.01.T01:intron 35.0%
! GTGTCTATAACCTTGTTTGA+TGG + Chr5:107107871-107107890 None:intergenic 35.0%
! TAGTGTTGAAATCCCAACAA+AGG - Chr5:107107743-107107762 MsG0580030133.01.T01:three_prime_UTR 35.0%
! TCTTGCCATTTGATGTGAAA+GGG - Chr5:107108255-107108274 MsG0580030133.01.T01:intron 35.0%
! TGTTGGTAAGAACCTTTGTT+GGG + Chr5:107112394-107112413 None:intergenic 35.0%
!! ATGATTTGTTGATTTCGTGC+AGG - Chr5:107112897-107112916 MsG0580030133.01.T01:CDS 35.0%
!! CATTTGATGTGAAAGGTGTT+TGG - Chr5:107113020-107113039 MsG0580030133.01.T01:intron 35.0%
!! CTATGTTTGATGATGGACTA+AGG + Chr5:107112288-107112307 None:intergenic 35.0%
!! GAGTTTTAGTCTAGTGGAAT+AGG + Chr5:107110928-107110947 None:intergenic 35.0%
!! GCCGTTTTATGCTATTAACA+TGG - Chr5:107110646-107110665 MsG0580030133.01.T01:intron 35.0%
!! TGAGTATTGACACTAGTAGT+AGG + Chr5:107109257-107109276 None:intergenic 35.0%
!! TTGAGAGATTTTTGAAGAGC+AGG + Chr5:107108035-107108054 None:intergenic 35.0%
!! TTTGATGATGGACTAAGGTT+TGG + Chr5:107112283-107112302 None:intergenic 35.0%
!! TTTTTAGATTAAGGGGTGTG+TGG - Chr5:107109061-107109080 MsG0580030133.01.T01:intron 35.0%
!!! ATTTGGAGTTTTTTGAGGGT+AGG + Chr5:107112164-107112183 None:intergenic 35.0%
!!! CTTGTTGTTTCTTTTGAGCT+TGG - Chr5:107108932-107108951 MsG0580030133.01.T01:CDS 35.0%
!!! GTCCAATTTGGAGTTTTTTG+AGG + Chr5:107112169-107112188 None:intergenic 35.0%
AAAGAGATTGCAGATGCACA+TGG - Chr5:107108643-107108662 MsG0580030133.01.T01:intron 40.0%
AAGAGATCTGCCACATCAAT+TGG + Chr5:107108239-107108258 None:intergenic 40.0%
AAGCAAAATCGTTTGATCCC+TGG - Chr5:107113567-107113586 MsG0580030133.01.T01:CDS 40.0%
AAGTTTCAAGCTTTCCTCCA+TGG + Chr5:107108291-107108310 None:intergenic 40.0%
AGCAGGAATAACAATGAGGA+TGG + Chr5:107108018-107108037 None:intergenic 40.0%
AGTCATCATAGAGGTCATTG+AGG + Chr5:107108856-107108875 None:intergenic 40.0%
ATGGAGGAAAGCTTGAAACT+TGG - Chr5:107108290-107108309 MsG0580030133.01.T01:intron 40.0%
CAATTTAGAGGGGTGATTTG+GGG + Chr5:107110343-107110362 None:intergenic 40.0%
CCACTAGACTAAAACTCACT+TGG - Chr5:107110931-107110950 MsG0580030133.01.T01:intron 40.0%
CGAATAAACACCTGAACAAG+AGG + Chr5:107110493-107110512 None:intergenic 40.0%
CTAAGATGGCTATATGAACC+AGG - Chr5:107108688-107108707 MsG0580030133.01.T01:intron 40.0%
CTTGGACTCACTAAAGCTAT+TGG - Chr5:107108308-107108327 MsG0580030133.01.T01:intron 40.0%
GAAGAGCAGGAATAACAATG+AGG + Chr5:107108022-107108041 None:intergenic 40.0%
GACTCTTCAACTAGACTACT+TGG - Chr5:107112919-107112938 MsG0580030133.01.T01:intron 40.0%
GAGGAACTAATACTGAATGC+AGG - Chr5:107111712-107111731 MsG0580030133.01.T01:intron 40.0%
GTAGATCCAACCAATGACTT+TGG - Chr5:107110544-107110563 MsG0580030133.01.T01:intron 40.0%
GTGGATGAAGGAGAGAAATT+AGG + Chr5:107110289-107110308 None:intergenic 40.0%
GTTGTATGATGTGTGTCATG+TGG + Chr5:107110068-107110087 None:intergenic 40.0%
TAAGCAAATCGTTTGATCCC+TGG - Chr5:107108815-107108834 MsG0580030133.01.T01:intron 40.0%
TAGTCAATTGAAGATGCCTG+TGG - Chr5:107107782-107107801 MsG0580030133.01.T01:three_prime_UTR 40.0%
TATTAGCAACAAGCGAGAGA+AGG - Chr5:107111876-107111895 MsG0580030133.01.T01:intron 40.0%
TCTTCAGAGGAAATAGAGTC+TGG - Chr5:107109945-107109964 MsG0580030133.01.T01:intron 40.0%
TGACTTACTTGATTGACTGC+AGG + Chr5:107108391-107108410 None:intergenic 40.0%
! AGAGAGTTTTGCAACGCAAA+TGG - Chr5:107108542-107108561 MsG0580030133.01.T01:CDS 40.0%
! CAGTCAACCTTGCAGAATTT+TGG + Chr5:107111258-107111277 None:intergenic 40.0%
! CTCTTGCCATTTGATGTGAA+AGG - Chr5:107108254-107108273 MsG0580030133.01.T01:intron 40.0%
! GCATTTTCACCATTGAGGAA+AGG - Chr5:107108578-107108597 MsG0580030133.01.T01:CDS 40.0%
! GTGTTGGTAAGAACCTTTGT+TGG + Chr5:107112395-107112414 None:intergenic 40.0%
! TAACCGCATTTTCACCATTG+AGG - Chr5:107108573-107108592 MsG0580030133.01.T01:CDS 40.0%
! TTGTCTTTTCCCTCTTGTTC+AGG - Chr5:107110480-107110499 MsG0580030133.01.T01:intron 40.0%
! TTTCCAGGTTGAGAACTAAG+TGG + Chr5:107108206-107108225 None:intergenic 40.0%
!! AACCTTGCAGAATTTTGGCA+AGG + Chr5:107111253-107111272 None:intergenic 40.0%
!! CCAAGTGAGTTTTAGTCTAG+TGG + Chr5:107110934-107110953 None:intergenic 40.0%
!! TTGTTTTGCGCAGTCCAATT+TGG + Chr5:107112181-107112200 None:intergenic 40.0%
!!! CTTGAGAGATTTTTGAAGCG+CGG + Chr5:107112671-107112690 None:intergenic 40.0%
!!! TTTTTGTTGTTGGGTTGGGA+AGG + Chr5:107107711-107107730 None:intergenic 40.0%
AAGATGCCTGTGGTTGGAAT+GGG - Chr5:107107792-107107811 MsG0580030133.01.T01:three_prime_UTR 45.0%
AAGCGCGGAATAACAAGATG+AGG + Chr5:107112656-107112675 None:intergenic 45.0%
AAGGTTCTTACCAACACTCC+TGG - Chr5:107112398-107112417 MsG0580030133.01.T01:intron 45.0%
ACAGGCATCTTCAATTGACC+AGG + Chr5:107112419-107112438 None:intergenic 45.0%
ACGGGTCTTAGAATGAGACA+AGG + Chr5:107109446-107109465 None:intergenic 45.0%
AGAGGGGAGATAGAGTGAAA+AGG + Chr5:107110238-107110257 None:intergenic 45.0%
AGATAGAGGCAGGGACAAAA+TGG - Chr5:107111951-107111970 MsG0580030133.01.T01:intron 45.0%
ATGACGCCAAAGTCATTGGT+TGG + Chr5:107110553-107110572 None:intergenic 45.0%
ATTCAAAGTTGGCGAATGGG+CGG + Chr5:107112043-107112062 None:intergenic 45.0%
ATTGACTGCAGGAAGAACAG+TGG + Chr5:107108380-107108399 None:intergenic 45.0%
ATTGACTGCTGGAAGAACAG+TGG + Chr5:107113140-107113159 None:intergenic 45.0%
CAATTGAAGATGCCTGTGGT+TGG - Chr5:107107786-107107805 MsG0580030133.01.T01:three_prime_UTR 45.0%
CAGAGGACCAAATGAGGTTA+TGG - Chr5:107113357-107113376 MsG0580030133.01.T01:intron 45.0%
CGTCATCAACGTTGTAGATC+CGG - Chr5:107110567-107110586 MsG0580030133.01.T01:intron 45.0%
CTCCTTGCCAAAATTCTGCA+AGG - Chr5:107111248-107111267 MsG0580030133.01.T01:intron 45.0%
GCAGGGACCAAATGAAGTTA+TGG - Chr5:107108606-107108625 MsG0580030133.01.T01:intron 45.0%
TATGGCTCAGAACAAGCTCT+TGG - Chr5:107107909-107107928 MsG0580030133.01.T01:three_prime_UTR 45.0%
TCTCCTTCATCCACCTAAGA+GGG - Chr5:107110295-107110314 MsG0580030133.01.T01:intron 45.0%
TGGTCAATTGAAGATGCCTG+TGG - Chr5:107112418-107112437 MsG0580030133.01.T01:intron 45.0%
TTGGGAACAAAAGTGACTCC+TGG + Chr5:107108709-107108728 None:intergenic 45.0%
TTTGATACTGCTGCTGCCTA+TGG - Chr5:107107891-107107910 MsG0580030133.01.T01:three_prime_UTR 45.0%
! AAGAGCTTGTTCTGAGCCAT+AGG + Chr5:107107910-107107929 None:intergenic 45.0%
! ATTGAGGAAAGGTGCAAGCA+GGG - Chr5:107108589-107108608 MsG0580030133.01.T01:intron 45.0%
! CTTCAATTGACCAGGAGTGT+TGG + Chr5:107112411-107112430 None:intergenic 45.0%
! GCTTCTTTTGTTGCCATGCA+AGG + Chr5:107108520-107108539 None:intergenic 45.0%
! GGTTCTTTTGTTGCCATGCA+AGG + Chr5:107113270-107113289 None:intergenic 45.0%
! GTCATTGGTTGGATCTACAC+TGG + Chr5:107110542-107110561 None:intergenic 45.0%
! TGTATTGAGAGGGCACATGT+CGG - Chr5:107109980-107109999 MsG0580030133.01.T01:intron 45.0%
! TTTGGCAAGGAGCAAGTTGA+TGG + Chr5:107111240-107111259 None:intergenic 45.0%
!! GAAAGGTGTTTGGGAATCCA+TGG - Chr5:107113030-107113049 MsG0580030133.01.T01:intron 45.0%
!! GTTGATGACGCCAAAGTCAT+TGG + Chr5:107110557-107110576 None:intergenic 45.0%
!! TCTTGGAGAGGCTTTGAAAG+AGG - Chr5:107107926-107107945 MsG0580030133.01.T01:three_prime_UTR 45.0%
!! TTGGCAAGGAGCAAGTTGAT+GGG + Chr5:107111239-107111258 None:intergenic 45.0%
!!! GAAAGGGTTTTGGGAATCCA+TGG - Chr5:107108271-107108290 MsG0580030133.01.T01:intron 45.0%
!!! GGAGTTTTTTGAGGGTAGGT+GGG + Chr5:107112160-107112179 None:intergenic 45.0%
!!! TGGAGTTTTTTGAGGGTAGG+TGG + Chr5:107112161-107112180 None:intergenic 45.0%
!!! ATATATTAAGTTTTTTAATT+GGG + Chr5:107111825-107111844 None:intergenic 5.0%
!!! TATATATTAAGTTTTTTAAT+TGG + Chr5:107111826-107111845 None:intergenic 5.0%
!!! TTAAATATGAATTTTTTAAA+CGG - Chr5:107111533-107111552 MsG0580030133.01.T01:intron 5.0%
!!! TTTTTAATTTTTTATTTACA+GGG - Chr5:107110201-107110220 MsG0580030133.01.T01:intron 5.0%
!!! TTTTTATTTTTTTTTTATGT+TGG + Chr5:107110113-107110132 None:intergenic 5.0%
AGGTGGAGATGAACCTTGCA+TGG - Chr5:107108504-107108523 MsG0580030133.01.T01:CDS 50.0%
AGGTGTTTGGGAATCCATGG+AGG - Chr5:107113033-107113052 MsG0580030133.01.T01:intron 50.0%
CACCTAAGAGGGGTCGTTTA+GGG - Chr5:107110306-107110325 MsG0580030133.01.T01:intron 50.0%
CATCAACGTTGTAGATCCGG+AGG - Chr5:107110570-107110589 MsG0580030133.01.T01:intron 50.0%
CTCAGAACAAGCTCTTGGAG+AGG - Chr5:107107914-107107933 MsG0580030133.01.T01:three_prime_UTR 50.0%
CTCCTTCATCCACCTAAGAG+GGG - Chr5:107110296-107110315 MsG0580030133.01.T01:intron 50.0%
CTCTCCTTCATCCACCTAAG+AGG - Chr5:107110294-107110313 MsG0580030133.01.T01:intron 50.0%
CTGCTTGCACCTTTCCTCAA+CGG + Chr5:107108590-107108609 None:intergenic 50.0%
CTGCTTGCACCTTTCCTCAA+TGG + Chr5:107108590-107108609 None:intergenic 50.0%
GAAGATGCCTGTGGTTGGAA+TGG - Chr5:107107791-107107810 MsG0580030133.01.T01:three_prime_UTR 50.0%
TCATAGAGGTCATTGAGGCC+TGG + Chr5:107108851-107108870 None:intergenic 50.0%
TGCAAGCAGAGGACCAAATG+AGG - Chr5:107113351-107113370 MsG0580030133.01.T01:intron 50.0%
TTCAAAGTTGGCGAATGGGC+GGG + Chr5:107112042-107112061 None:intergenic 50.0%
TTGTCGTCTTTGTGCGACGT+TGG - Chr5:107110457-107110476 MsG0580030133.01.T01:intron 50.0%
! ATCCGGAGGCATGACTATTC+CGG - Chr5:107110584-107110603 MsG0580030133.01.T01:intron 50.0%
! CATTGAGGAAAGGTGCAAGC+AGG - Chr5:107108588-107108607 MsG0580030133.01.T01:CDS 50.0%
! TAACTGCGTTTTCGCCGTTG+AGG - Chr5:107113323-107113342 MsG0580030133.01.T01:CDS 50.0%
! TGGCCACTTAGTTCTCAACC+TGG - Chr5:107108200-107108219 MsG0580030133.01.T01:CDS 50.0%
! TTGAGGAAAGGTGCAAGCAG+AGG - Chr5:107108590-107108609 MsG0580030133.01.T01:intron 50.0%
!!! AGGGTTTTGGGAATCCATGG+AGG - Chr5:107108274-107108293 MsG0580030133.01.T01:intron 50.0%
ACGGCTCACAAGAGAGAGAG+AGG + Chr5:107110256-107110275 None:intergenic 55.0%
CCACCTAAGAGGGGTCGTTT+AGG - Chr5:107110305-107110324 MsG0580030133.01.T01:intron 55.0%
CCTAAACGACCCCTCTTAGG+TGG + Chr5:107110308-107110327 None:intergenic 55.0%
CGGCTCACAAGAGAGAGAGA+GGG + Chr5:107110255-107110274 None:intergenic 55.0%
CTCCGGAATAGTCATGCCTC+CGG + Chr5:107110589-107110608 None:intergenic 55.0%
GACCCCTCTTAGGTGGATGA+AGG + Chr5:107110301-107110320 None:intergenic 55.0%
GACCCTAAACGACCCCTCTT+AGG + Chr5:107110311-107110330 None:intergenic 55.0%
GCTGATCCCATTCCAACCAC+AGG + Chr5:107107801-107107820 None:intergenic 55.0%
GGCTCACAAGAGAGAGAGAG+GGG + Chr5:107110254-107110273 None:intergenic 55.0%
TCAAAGTTGGCGAATGGGCG+GGG + Chr5:107112041-107112060 None:intergenic 55.0%
! GCGTTTTCGCCGTTGAGGAA+AGG - Chr5:107113328-107113347 MsG0580030133.01.T01:CDS 55.0%
!! TCATTGAGGCCTGGCTTGGT+TGG + Chr5:107108842-107108861 None:intergenic 55.0%
AAAGTTGGCGAATGGGCGGG+GGG + Chr5:107112039-107112058 None:intergenic 60.0%
ATCCCTGGACCAACCAAGCC+AGG - Chr5:107108830-107108849 MsG0580030133.01.T01:intron 60.0%
CAAAGTTGGCGAATGGGCGG+GGG + Chr5:107112040-107112059 None:intergenic 60.0%
GAGGTCATTGAGGCCTGGCT+TGG + Chr5:107108846-107108865 None:intergenic 60.0%
!! AGGCCTGGCTTGGTTGGTCC+AGG + Chr5:107108836-107108855 None:intergenic 65.0%
!! GGCCTGGCTTGGTTGGTCCA+GGG + Chr5:107108835-107108854 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 107107652 107113874 107107652 ID=MsG0580030133.01;Name=MsG0580030133.01
Chr5 mRNA 107107652 107113874 107107652 ID=MsG0580030133.01.T01;Parent=MsG0580030133.01;Name=MsG0580030133.01.T01;_AED=0.48;_eAED=0.48;_QI=86|0.4|0.66|1|1|1|6|340|469
Chr5 exon 107107652 107108270 107107652 ID=MsG0580030133.01.T01:exon:17343;Parent=MsG0580030133.01.T01
Chr5 exon 107108364 107108607 107108364 ID=MsG0580030133.01.T01:exon:17342;Parent=MsG0580030133.01.T01
Chr5 exon 107108889 107109051 107108889 ID=MsG0580030133.01.T01:exon:17341;Parent=MsG0580030133.01.T01
Chr5 exon 107112763 107112926 107112763 ID=MsG0580030133.01.T01:exon:17340;Parent=MsG0580030133.01.T01
Chr5 exon 107113124 107113366 107113124 ID=MsG0580030133.01.T01:exon:17339;Parent=MsG0580030133.01.T01
Chr5 exon 107113472 107113874 107113472 ID=MsG0580030133.01.T01:exon:17338;Parent=MsG0580030133.01.T01
Chr5 five_prime_UTR 107113789 107113874 107113789 ID=MsG0580030133.01.T01:five_prime_utr;Parent=MsG0580030133.01.T01
Chr5 CDS 107113472 107113788 107113472 ID=MsG0580030133.01.T01:cds;Parent=MsG0580030133.01.T01
Chr5 CDS 107113124 107113366 107113124 ID=MsG0580030133.01.T01:cds;Parent=MsG0580030133.01.T01
Chr5 CDS 107112763 107112926 107112763 ID=MsG0580030133.01.T01:cds;Parent=MsG0580030133.01.T01
Chr5 CDS 107108889 107109051 107108889 ID=MsG0580030133.01.T01:cds;Parent=MsG0580030133.01.T01
Chr5 CDS 107108364 107108607 107108364 ID=MsG0580030133.01.T01:cds;Parent=MsG0580030133.01.T01
Chr5 CDS 107107992 107108270 107107992 ID=MsG0580030133.01.T01:cds;Parent=MsG0580030133.01.T01
Chr5 three_prime_UTR 107107652 107107991 107107652 ID=MsG0580030133.01.T01:three_prime_utr;Parent=MsG0580030133.01.T01
Gene Sequence

>MsG0580030133.01.T01

ATGGGTAGTGTTGAAATCCCAACAAAGGTTCTTACAAACACTTCTAGTCAATTGAAGATGCCTGTGGTTGGAATGGGATCAGCCCCTGACTTCACATGTAAGAAAGACACAAAAGATGCAATCATTGAAGCCATCAAACAAGGTTATAGACACTTTGATACTGCTGCTGCCTATGGCTCAGAACAAGCTCTTGGAGAGGCTTTGAAAGAGGCAATTGAACTTGGTCTTGTCACTAGAGAAGACCTTTTTGTTACTTCTAAACTTTGGGTTACTGAAACCATCCTCATTGTTATTCCTGCTCTTCAAAAATCTCTCAAGACTCTTCAATTGGACTATTTGGACTTGTATTTGATTCATTGGCCACTTAGTTCTCAACCTGGAAAGTTTACATTTCCAATTGATGTGGCAGATCTCTTGCCATTTGATGTGAAAGGGTTTTGGGAATCCATGGAGGAAAGCTTGAAACTTGGACTCACTAAAGCTATTGGAGTTAGTAACTCTCTGTCAAGAAACTTGAAAATCTTCTCTCTGTTGCCACTGTTCTTCCTGCAGTCAATCAAGTGCAAGCAGGGACCAAATGAAGTTATGGAGAATGATATGCTTAAAGAGATTGCAGATGCACATGGAAAGTCTGTTGCACAAATATCTCTAAGATGGCTATATGAACCAGGAGTCACTTTTGTTCCCAAGAGTTATGATAAGGAAAGAATGAACCAAAATTTGCAAAGACACAAAGATGCAATCATTGAAGCCATCAAACAAGGTTATAGACACTTTGATACTGCTGCTGCCTATGGCTCAGAACAAGCTCTTGGAGAGGCTTTGAAAGAGGCAATTGAACTTGGTCTTGTCACTAGAGAAGACCTTTTGTTACTTCCAAACTTTGGGACTCTTCAACTAGACTACTTGGACTTGTACTTGATTCATTGGCCACTTAGTTCTCAACCTGGAAAGTTTTCATTTCCAATTGATGTGGCAGATCTCTTACCATTTGATGTGAAAGGTGTTTGGGAATCCATGGAGGAAAGCTTGAAACTTGGACTCACTAAAGCTATTGGAGTTAGTAACTTCTCTGTCAAGAAACTTGAAAATCTTCTCTCTGTTGCCACTGTTCTTCCAGCAGTCAATCAAGTGGAGATGAACCTTGCATGGCAACAAAAGAACCTTAGAGAGTTTTGCAATGCAAATGGAATAGTGTTAACTGCGTTTTCGCCGTTGAGGAAAGGTGCAAGCAGAGGACCAAATGAGGTTATGGAGAATGATATGCTTAAAGAGATTGCAGATGCACATGGAAAGTCTGTTGCACAAATTTCTCTAAGATGGCTATATGAACAAGGAGTCACTTTTGTTCCCAAGAGTTATGATAAGGAAAGAATGAACCAAATTTGTGTATCTTTGATTGGTCATTGA

Protein sequence

>MsG0580030133.01.T01

MGSVEIPTKVLTNTSSQLKMPVVGMGSAPDFTCKKDTKDAIIEAIKQGYRHFDTAAAYGSEQALGEALKEAIELGLVTREDLFVTSKLWVTETILIVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFTFPIDVADLLPFDVKGFWESMEESLKLGLTKAIGVSNSLSRNLKIFSLLPLFFLQSIKCKQGPNEVMENDMLKEIADAHGKSVAQISLRWLYEPGVTFVPKSYDKERMNQNLQRHKDAIIEAIKQGYRHFDTAAAYGSEQALGEALKEAIELGLVTREDLLLLPNFGTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQKNLREFCNANGIVLTAFSPLRKGASRGPNEVMENDMLKEIADAHGKSVAQISLRWLYEQGVTFVPKSYDKERMNQICVSLIGH*