Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001691.01.T01 | GAU41758.1 | 53.333 | 150 | 25 | 5 | 1 | 105 | 1 | 150 | 2.47E-31 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001691.01.T01 | P48976 | 42.568 | 148 | 40 | 4 | 1 | 103 | 1 | 148 | 4.29E-26 | 97.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001691.01.T01 | I3SJF9 | 55.333 | 150 | 22 | 5 | 1 | 105 | 1 | 150 | 4.51e-33 | 121 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048036.01 | MsG0180001691.01 | 0.805047 | 1.611623e-49 | 8.441155e-47 |
| MsG0080048345.01 | MsG0180001691.01 | 0.809018 | 2.327847e-50 | 1.351459e-47 |
| MsG0080048347.01 | MsG0180001691.01 | 0.857295 | 1.798755e-62 | 4.417850e-59 |
| MsG0080048348.01 | MsG0180001691.01 | 0.806042 | 9.967121e-50 | 5.355580e-47 |
| MsG0080048350.01 | MsG0180001691.01 | 0.805313 | 1.417850e-49 | 7.477125e-47 |
| MsG0080048352.01 | MsG0180001691.01 | 0.855824 | 4.866371e-62 | 1.138012e-58 |
| MsG0180000147.01 | MsG0180001691.01 | 0.800796 | 1.218005e-48 | 5.723056e-46 |
| MsG0180000148.01 | MsG0180001691.01 | 0.824101 | 9.684247e-54 | 8.495757e-51 |
| MsG0180000551.01 | MsG0180001691.01 | 0.812760 | 3.604853e-51 | 2.311498e-48 |
| MsG0180000583.01 | MsG0180001691.01 | 0.820437 | 6.863134e-53 | 5.430415e-50 |
| MsG0180000738.01 | MsG0180001691.01 | 0.820118 | 8.123067e-53 | 6.371533e-50 |
| MsG0180000930.01 | MsG0180001691.01 | 0.807122 | 5.898132e-50 | 3.258101e-47 |
| MsG0180001513.01 | MsG0180001691.01 | 0.812923 | 3.320011e-51 | 2.137997e-48 |
| MsG0180001691.01 | MsG0180002274.01 | 0.810937 | 8.992700e-51 | 5.493751e-48 |
| MsG0180001691.01 | MsG0180003248.01 | 0.824202 | 9.169869e-54 | 8.067816e-51 |
| MsG0180001691.01 | MsG0180003249.01 | 0.806143 | 9.492468e-50 | 5.113645e-47 |
| MsG0180001691.01 | MsG0180003250.01 | 0.822963 | 1.787864e-53 | 1.518916e-50 |
| MsG0180001691.01 | MsG0180003484.01 | 0.818563 | 1.835953e-52 | 1.379011e-49 |
| MsG0180001691.01 | MsG0180003993.01 | 0.810346 | 1.206286e-50 | 7.253634e-48 |
| MsG0180001691.01 | MsG0180004203.01 | 0.800161 | 1.641332e-48 | 7.588529e-46 |
| MsG0180001691.01 | MsG0180004328.01 | 0.803108 | 4.079817e-49 | 2.032826e-46 |
| MsG0180001691.01 | MsG0180004942.01 | 0.818031 | 2.423248e-52 | 1.793570e-49 |
| MsG0180001691.01 | MsG0180005272.01 | 0.810256 | 1.261470e-50 | 7.567695e-48 |
| MsG0180001691.01 | MsG0180005328.01 | 0.801721 | 7.876322e-49 | 3.788371e-46 |
| MsG0180001691.01 | MsG0180005356.01 | 0.860793 | 1.611955e-63 | 4.460755e-60 |
| MsG0180001691.01 | MsG0180005357.01 | 0.823677 | 1.217590e-53 | 1.055616e-50 |
| MsG0180001691.01 | MsG0180005358.01 | 0.846068 | 2.739000e-59 | 4.658298e-56 |
| MsG0180001691.01 | MsG0180005572.01 | 0.811588 | 6.493527e-51 | 4.035360e-48 |
| MsG0180001691.01 | MsG0180005648.01 | 0.855119 | 7.810217e-62 | 1.783942e-58 |
| MsG0180001691.01 | MsG0280006381.01 | -0.802572 | 5.265481e-49 | 2.588010e-46 |
| MsG0180001691.01 | MsG0280006442.01 | 0.810404 | 1.172269e-50 | 7.059665e-48 |
| MsG0180001691.01 | MsG0280006559.01 | 0.803054 | 4.185546e-49 | 2.082644e-46 |
| MsG0180001691.01 | MsG0280006898.01 | 0.807158 | 5.794252e-50 | 3.203863e-47 |
| MsG0180001691.01 | MsG0280007199.01 | 0.841314 | 5.122858e-58 | 7.497523e-55 |
| MsG0180001691.01 | MsG0280007216.01 | 0.812310 | 4.520952e-51 | 2.864660e-48 |
| MsG0180001691.01 | MsG0280007786.01 | 0.809315 | 2.011087e-50 | 1.176895e-47 |
| MsG0180001691.01 | MsG0280007911.01 | 0.841177 | 5.566834e-58 | 8.113069e-55 |
| MsG0180001691.01 | MsG0280008405.01 | 0.813196 | 2.892495e-51 | 1.876446e-48 |
| MsG0180001691.01 | MsG0280009167.01 | 0.823397 | 1.416208e-53 | 1.217835e-50 |
| MsG0180001691.01 | MsG0280009526.01 | 0.807693 | 4.462930e-50 | 2.502204e-47 |
| MsG0180001691.01 | MsG0280009742.01 | -0.809260 | 2.065566e-50 | 1.207055e-47 |
| MsG0180001691.01 | MsG0280010240.01 | 0.802986 | 4.324718e-49 | 2.148112e-46 |
| MsG0180001691.01 | MsG0280010629.01 | 0.816942 | 4.262865e-52 | 3.062846e-49 |
| MsG0180001691.01 | MsG0280010802.01 | 0.819280 | 1.261768e-52 | 9.666569e-50 |
| MsG0180001691.01 | MsG0280011165.01 | 0.830791 | 2.407335e-55 | 2.562787e-52 |
| MsG0180001691.01 | MsG0280011193.01 | 0.806400 | 8.377731e-50 | 4.542744e-47 |
| MsG0180001691.01 | MsG0280011203.01 | 0.817800 | 2.733198e-52 | 2.010349e-49 |
| MsG0180001691.01 | MsG0280011238.01 | 0.842331 | 2.759908e-58 | 4.170740e-55 |
| MsG0180001691.01 | MsG0280011267.01 | 0.828361 | 9.383752e-55 | 9.305803e-52 |
| MsG0180001691.01 | MsG0280011281.01 | -0.811117 | 8.217433e-51 | 5.043750e-48 |
| MsG0180001691.01 | MsG0380011613.01 | 0.801527 | 8.633610e-49 | 4.132372e-46 |
| MsG0180001691.01 | MsG0380011968.01 | 0.802548 | 5.324351e-49 | 2.615428e-46 |
| MsG0180001691.01 | MsG0380011974.01 | 0.832753 | 7.898666e-56 | 8.911572e-53 |
| MsG0180001691.01 | MsG0380013300.01 | 0.811322 | 7.418105e-51 | 4.577620e-48 |
| MsG0180001691.01 | MsG0380013449.01 | 0.801597 | 8.354306e-49 | 4.005514e-46 |
| MsG0180001691.01 | MsG0380013452.01 | 0.822998 | 1.755088e-53 | 1.492570e-50 |
| MsG0180001691.01 | MsG0380014639.01 | -0.821205 | 4.569394e-53 | 3.693695e-50 |
| MsG0180001691.01 | MsG0380014642.01 | -0.821819 | 3.295698e-53 | 2.710358e-50 |
| MsG0180001691.01 | MsG0380014735.01 | -0.821610 | 3.684964e-53 | 3.012296e-50 |
| MsG0180001691.01 | MsG0380015323.01 | 0.823808 | 1.134979e-53 | 9.875986e-51 |
| MsG0180001691.01 | MsG0380015369.01 | 0.805088 | 1.580643e-49 | 8.287500e-47 |
| MsG0180001691.01 | MsG0380015572.01 | 0.808698 | 2.725841e-50 | 1.569096e-47 |
| MsG0180001691.01 | MsG0380016299.01 | 0.801672 | 8.062439e-49 | 3.873075e-46 |
| MsG0180001691.01 | MsG0380016801.01 | 0.803168 | 3.965650e-49 | 1.979073e-46 |
| MsG0180001691.01 | MsG0380016935.01 | -0.817959 | 2.515798e-52 | 1.858454e-49 |
| MsG0180001691.01 | MsG0380017151.01 | 0.829500 | 4.971359e-55 | 5.097068e-52 |
| MsG0180001691.01 | MsG0380017405.01 | -0.807727 | 4.389139e-50 | 2.463146e-47 |
| MsG0180001691.01 | MsG0380017754.01 | 0.831553 | 1.563732e-55 | 1.702887e-52 |
| MsG0180001691.01 | MsG0380018006.01 | 0.806319 | 8.716580e-50 | 4.716705e-47 |
| MsG0180001691.01 | MsG0380018051.01 | 0.805042 | 1.615749e-49 | 8.461598e-47 |
| MsG0180001691.01 | MsG0480018202.01 | -0.800941 | 1.138095e-48 | 5.367503e-46 |
| MsG0180001691.01 | MsG0480018440.01 | 0.807367 | 5.232829e-50 | 2.909180e-47 |
| MsG0180001691.01 | MsG0480018563.01 | 0.838654 | 2.528605e-57 | 3.409324e-54 |
| MsG0180001691.01 | MsG0480019171.01 | 0.805294 | 1.430697e-49 | 7.541290e-47 |
| MsG0180001691.01 | MsG0480019217.01 | 0.811914 | 5.515008e-51 | 3.456974e-48 |
| MsG0180001691.01 | MsG0480019304.01 | 0.817023 | 4.089310e-52 | 2.944484e-49 |
| MsG0180001691.01 | MsG0480019532.01 | 0.804358 | 2.245228e-49 | 1.155271e-46 |
| MsG0180001691.01 | MsG0480019842.01 | 0.801246 | 9.859203e-49 | 4.685714e-46 |
| MsG0180001691.01 | MsG0480020497.01 | 0.809594 | 1.751872e-50 | 1.032894e-47 |
| MsG0180001691.01 | MsG0480021131.01 | 0.848509 | 5.856290e-60 | 1.077287e-56 |
| MsG0180001691.01 | MsG0480021360.01 | 0.802225 | 6.206674e-49 | 3.023800e-46 |
| MsG0180001691.01 | MsG0480021433.01 | 0.828625 | 8.100324e-55 | 8.095376e-52 |
| MsG0180001691.01 | MsG0480022308.01 | 0.804425 | 2.173889e-49 | 1.120438e-46 |
| MsG0180001691.01 | MsG0480022309.01 | 0.820521 | 6.563172e-53 | 5.204885e-50 |
| MsG0180001691.01 | MsG0480022310.01 | 0.852639 | 4.044690e-61 | 8.506261e-58 |
| MsG0180001691.01 | MsG0480022311.01 | 0.803727 | 3.037186e-49 | 1.537614e-46 |
| MsG0180001691.01 | MsG0480022383.01 | 0.805263 | 1.452801e-49 | 7.651099e-47 |
| MsG0180001691.01 | MsG0480022428.01 | 0.812766 | 3.593867e-51 | 2.304789e-48 |
| MsG0180001691.01 | MsG0480022655.01 | 0.803958 | 2.718760e-49 | 1.384684e-46 |
| MsG0180001691.01 | MsG0480022735.01 | 0.803181 | 3.940273e-49 | 1.967074e-46 |
| MsG0180001691.01 | MsG0480022736.01 | 0.811152 | 8.076145e-51 | 4.961603e-48 |
| MsG0180001691.01 | MsG0480022833.01 | 0.850200 | 1.979702e-60 | 3.847743e-57 |
| MsG0180001691.01 | MsG0480023067.01 | 0.804124 | 2.510945e-49 | 1.284257e-46 |
| MsG0180001691.01 | MsG0480023107.01 | 0.814879 | 1.230477e-51 | 8.354831e-49 |
| MsG0180001691.01 | MsG0480023152.01 | -0.806251 | 9.006533e-50 | 4.865459e-47 |
| MsG0180001691.01 | MsG0480023244.01 | -0.807689 | 4.471205e-50 | 2.506661e-47 |
| MsG0180001691.01 | MsG0480023322.01 | 0.814072 | 1.855508e-51 | 1.232766e-48 |
| MsG0180001691.01 | MsG0480023349.01 | 0.811963 | 5.381936e-51 | 3.378145e-48 |
| MsG0180001691.01 | MsG0580024087.01 | 0.801428 | 9.046557e-49 | 4.319187e-46 |
| MsG0180001691.01 | MsG0580024176.01 | 0.849654 | 2.814690e-60 | 5.373379e-57 |
| MsG0180001691.01 | MsG0580024218.01 | 0.826069 | 3.320710e-54 | 3.081609e-51 |
| MsG0180001691.01 | MsG0580024220.01 | 0.830142 | 3.469581e-55 | 3.624367e-52 |
| MsG0180001691.01 | MsG0580024408.01 | 0.826405 | 2.761876e-54 | 2.587879e-51 |
| MsG0180001691.01 | MsG0580024591.01 | 0.816193 | 6.273641e-52 | 4.415798e-49 |
| MsG0180001691.01 | MsG0580024719.01 | 0.803000 | 4.296190e-49 | 2.134687e-46 |
| MsG0180001691.01 | MsG0580024990.01 | 0.815582 | 8.585418e-52 | 5.942643e-49 |
| MsG0180001691.01 | MsG0580025431.01 | 0.825550 | 4.409029e-54 | 4.031607e-51 |
| MsG0180001691.01 | MsG0580025682.01 | 0.807943 | 3.947723e-50 | 2.227954e-47 |
| MsG0180001691.01 | MsG0580026019.01 | 0.816263 | 6.051647e-52 | 4.267873e-49 |
| MsG0180001691.01 | MsG0580027646.01 | 0.813660 | 2.287850e-51 | 1.503086e-48 |
| MsG0180001691.01 | MsG0580027797.01 | 0.814630 | 1.397397e-51 | 9.425278e-49 |
| MsG0180001691.01 | MsG0580028302.01 | 0.807421 | 5.095963e-50 | 2.837173e-47 |
| MsG0180001691.01 | MsG0580028490.01 | 0.807642 | 4.574365e-50 | 2.561353e-47 |
| MsG0180001691.01 | MsG0580029296.01 | 0.833932 | 4.013585e-56 | 4.691705e-53 |
| MsG0180001691.01 | MsG0580030133.01 | 0.840383 | 8.989562e-58 | 1.278349e-54 |
| MsG0180001691.01 | MsG0580030135.01 | 0.810917 | 9.082761e-51 | 5.545786e-48 |
| MsG0180001691.01 | MsG0580030145.01 | 0.805391 | 1.365799e-49 | 7.216910e-47 |
| MsG0180001691.01 | MsG0680030296.01 | 0.815899 | 7.297962e-52 | 5.095225e-49 |
| MsG0180001691.01 | MsG0680030613.01 | 0.822426 | 2.383738e-53 | 1.994651e-50 |
| MsG0180001691.01 | MsG0680030960.01 | 0.807362 | 5.246678e-50 | 2.916479e-47 |
| MsG0180001691.01 | MsG0680035584.01 | -0.831521 | 1.592432e-55 | 1.732376e-52 |
| MsG0180001691.01 | MsG0780036480.01 | 0.825867 | 3.708189e-54 | 3.421767e-51 |
| MsG0180001691.01 | MsG0780036661.01 | 0.856029 | 4.241006e-62 | 9.985601e-59 |
| MsG0180001691.01 | MsG0780038922.01 | 0.802123 | 6.513484e-49 | 3.165051e-46 |
| MsG0180001691.01 | MsG0780038939.01 | 0.810886 | 9.221839e-51 | 5.626015e-48 |
| MsG0180001691.01 | MsG0780039237.01 | 0.806859 | 6.702364e-50 | 3.677515e-47 |
| MsG0180001691.01 | MsG0780039576.01 | 0.841065 | 5.957161e-58 | 8.651013e-55 |
| MsG0180001691.01 | MsG0780039619.01 | 0.822345 | 2.488974e-53 | 2.077856e-50 |
| MsG0180001691.01 | MsG0780039839.01 | -0.805212 | 1.488439e-49 | 7.829049e-47 |
| MsG0180001691.01 | MsG0780039916.01 | 0.802278 | 6.052891e-49 | 2.952969e-46 |
| MsG0180001691.01 | MsG0780039925.01 | 0.810834 | 9.463868e-51 | 5.765522e-48 |
| MsG0180001691.01 | MsG0780039949.01 | 0.804326 | 2.279962e-49 | 1.172152e-46 |
| MsG0180001691.01 | MsG0780039968.01 | 0.814450 | 1.531601e-51 | 1.028016e-48 |
| MsG0180001691.01 | MsG0780039978.01 | 0.806020 | 1.007387e-49 | 5.410026e-47 |
| MsG0180001691.01 | MsG0780040181.01 | 0.802307 | 5.968894e-49 | 2.914322e-46 |
| MsG0180001691.01 | MsG0780040497.01 | 0.804828 | 1.790898e-49 | 9.327898e-47 |
| MsG0180001691.01 | MsG0780040613.01 | 0.809646 | 1.707005e-50 | 1.007853e-47 |
| MsG0180001691.01 | MsG0780041180.01 | 0.832272 | 1.039034e-55 | 1.155498e-52 |
| MsG0180001691.01 | MsG0780041316.01 | 0.858507 | 7.859560e-63 | 2.010508e-59 |
| MsG0180001691.01 | MsG0780041556.01 | 0.817557 | 3.100877e-52 | 2.265556e-49 |
| MsG0180001691.01 | MsG0880042122.01 | 0.833661 | 4.690139e-56 | 5.437473e-53 |
| MsG0180001691.01 | MsG0880042591.01 | 0.849433 | 3.243450e-60 | 6.147725e-57 |
| MsG0180001691.01 | MsG0880042740.01 | 0.845745 | 3.352645e-59 | 5.643338e-56 |
| MsG0180001691.01 | MsG0880042810.01 | 0.810831 | 9.480688e-51 | 5.775153e-48 |
| MsG0180001691.01 | MsG0880043212.01 | 0.813335 | 2.696393e-51 | 1.755940e-48 |
| MsG0180001691.01 | MsG0880043364.01 | 0.810538 | 1.096775e-50 | 6.628664e-48 |
| MsG0180001691.01 | MsG0880043481.01 | 0.810330 | 1.216045e-50 | 7.309217e-48 |
| MsG0180001691.01 | MsG0880043669.01 | 0.823291 | 1.499162e-53 | 1.285452e-50 |
| MsG0180001691.01 | MsG0880045677.01 | 0.820249 | 7.578071e-53 | 5.964857e-50 |
| MsG0180001691.01 | MsG0880046010.01 | -0.821776 | 3.372596e-53 | 2.770116e-50 |
| MsG0180001691.01 | MsG0880046271.01 | 0.801134 | 1.039176e-48 | 4.925025e-46 |
| MsG0180001691.01 | MsG0880046429.01 | 0.815302 | 9.911783e-52 | 6.808024e-49 |
| MsG0180001691.01 | MsG0880047714.01 | 0.858167 | 9.919413e-63 | 2.508767e-59 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001691.01.T01 | MTR_1g041285 | 55.333 | 150 | 22 | 5 | 1 | 105 | 1 | 150 | 1.14e-36 | 121 |
| MsG0180001691.01.T01 | MTR_1g076650 | 45.638 | 149 | 36 | 5 | 1 | 104 | 1 | 149 | 1.84e-26 | 95.9 |
| MsG0180001691.01.T01 | MTR_6g025320 | 43.243 | 148 | 39 | 4 | 1 | 103 | 1 | 148 | 4.62e-26 | 94.7 |
| MsG0180001691.01.T01 | MTR_7g087610 | 42.568 | 148 | 40 | 4 | 1 | 103 | 1 | 148 | 9.56e-26 | 94.0 |
| MsG0180001691.01.T01 | MTR_5g088320 | 42.568 | 148 | 40 | 4 | 1 | 103 | 1 | 148 | 2.96e-25 | 92.8 |
| MsG0180001691.01.T01 | MTR_0168s0120 | 44.954 | 109 | 28 | 3 | 27 | 103 | 4 | 112 | 7.90e-20 | 77.8 |
| MsG0180001691.01.T01 | MTR_6g025320 | 44.954 | 109 | 28 | 3 | 27 | 103 | 4 | 112 | 7.90e-20 | 77.8 |
| MsG0180001691.01.T01 | MTR_1g071150 | 38.356 | 146 | 46 | 4 | 1 | 102 | 1 | 146 | 1.12e-17 | 73.2 |
| MsG0180001691.01.T01 | MTR_7g115040 | 35.570 | 149 | 51 | 4 | 1 | 104 | 1 | 149 | 3.84e-14 | 64.3 |
| MsG0180001691.01.T01 | MTR_3g055510 | 39.394 | 99 | 52 | 3 | 1 | 99 | 41 | 131 | 6.23e-11 | 55.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001691.01.T01 | AT2G27030 | 43.919 | 148 | 38 | 4 | 1 | 103 | 1 | 148 | 2.29e-26 | 96.7 |
| MsG0180001691.01.T01 | AT3G56800 | 43.919 | 148 | 38 | 4 | 1 | 103 | 1 | 148 | 2.36e-26 | 95.5 |
| MsG0180001691.01.T01 | AT2G27030 | 43.919 | 148 | 38 | 4 | 1 | 103 | 1 | 148 | 2.36e-26 | 95.5 |
| MsG0180001691.01.T01 | AT2G41110 | 43.919 | 148 | 38 | 4 | 1 | 103 | 1 | 148 | 2.36e-26 | 95.5 |
| MsG0180001691.01.T01 | AT3G43810 | 43.243 | 148 | 39 | 4 | 1 | 103 | 1 | 148 | 4.83e-26 | 94.7 |
| MsG0180001691.01.T01 | AT5G21274 | 42.568 | 148 | 40 | 4 | 1 | 103 | 1 | 148 | 1.39e-25 | 93.6 |
| MsG0180001691.01.T01 | AT3G43810 | 43.243 | 148 | 39 | 4 | 1 | 103 | 1 | 148 | 1.47e-25 | 95.5 |
| MsG0180001691.01.T01 | AT5G37780 | 41.892 | 148 | 41 | 4 | 1 | 103 | 1 | 148 | 1.84e-24 | 90.9 |
| MsG0180001691.01.T01 | AT1G66410 | 41.892 | 148 | 41 | 4 | 1 | 103 | 1 | 148 | 1.84e-24 | 90.9 |
| MsG0180001691.01.T01 | AT3G22930 | 43.836 | 146 | 37 | 5 | 5 | 105 | 28 | 173 | 2.55e-24 | 91.3 |
| MsG0180001691.01.T01 | AT2G41110 | 40.625 | 160 | 38 | 4 | 1 | 103 | 1 | 160 | 3.03e-24 | 90.5 |
| MsG0180001691.01.T01 | AT4G14640 | 42.759 | 145 | 38 | 5 | 5 | 104 | 6 | 150 | 4.44e-23 | 87.4 |
| MsG0180001691.01.T01 | AT5G37780 | 38.037 | 163 | 41 | 4 | 1 | 103 | 1 | 163 | 7.04e-22 | 84.7 |
| MsG0180001691.01.T01 | AT1G66410 | 39.241 | 158 | 41 | 4 | 1 | 103 | 1 | 158 | 3.88e-21 | 82.4 |
| MsG0180001691.01.T01 | AT5G37780 | 36.207 | 174 | 40 | 5 | 1 | 103 | 1 | 174 | 2.53e-20 | 80.9 |
| MsG0180001691.01.T01 | AT3G43810 | 44.954 | 109 | 28 | 3 | 27 | 103 | 4 | 112 | 8.28e-20 | 77.8 |
| MsG0180001691.01.T01 | AT3G43810 | 44.954 | 109 | 28 | 3 | 27 | 103 | 4 | 112 | 8.28e-20 | 77.8 |
| MsG0180001691.01.T01 | AT1G66410 | 44.037 | 109 | 29 | 3 | 27 | 103 | 4 | 112 | 4.98e-19 | 75.9 |
| MsG0180001691.01.T01 | AT1G66410 | 44.037 | 109 | 29 | 3 | 27 | 103 | 4 | 112 | 4.98e-19 | 75.9 |
| MsG0180001691.01.T01 | AT5G37780 | 44.037 | 109 | 29 | 3 | 27 | 103 | 27 | 135 | 8.74e-19 | 75.9 |
| MsG0180001691.01.T01 | AT4G14640 | 86.486 | 37 | 5 | 0 | 68 | 104 | 96 | 132 | 2.43e-15 | 67.0 |
| MsG0180001691.01.T01 | AT2G41090 | 31.724 | 145 | 57 | 4 | 1 | 103 | 1 | 145 | 1.67e-12 | 60.8 |
| MsG0180001691.01.T01 | AT3G51920 | 31.081 | 148 | 57 | 4 | 1 | 103 | 1 | 148 | 4.54e-11 | 56.2 |
Find 22 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATTGAATTTGTTGATTC+TGG | 0.176831 | 1:+25390064 | MsG0180001691.01.T01:CDS |
| CAACCTCGTTTATCATTTCT+TGG | 0.231199 | 1:-25390025 | None:intergenic |
| CTTCTTTGATCTCAACAATT+TGG | 0.239416 | 1:-25389678 | None:intergenic |
| TTGTTGATTCTGGAACTTAA+TGG | 0.285580 | 1:+25390074 | MsG0180001691.01.T01:CDS |
| GATGATTAAAGAAGCAGATT+TGG | 0.325770 | 1:+25391383 | MsG0180001691.01.T01:CDS |
| TTGAGACAAGTATGATCAAT+TGG | 0.348422 | 1:+25391329 | MsG0180001691.01.T01:intron |
| TTCTTGGAGCTCTCCTCTGT+TGG | 0.358344 | 1:-25390009 | None:intergenic |
| TGCAACTGTAATTAGGTCAT+TGG | 0.376466 | 1:+25389978 | MsG0180001691.01.T01:intron |
| TCTTGGAGCTCTCCTCTGTT+GGG | 0.377584 | 1:-25390008 | None:intergenic |
| TCCAGAATCAACAAATTCAA+TGG | 0.435475 | 1:-25390065 | None:intergenic |
| CATCTTGTCAAACAAGCAAA+AGG | 0.480213 | 1:-25389701 | None:intergenic |
| GGATAGTTTATTTCATCCAA+TGG | 0.496741 | 1:-25391454 | None:intergenic |
| CGAGGTTGATGCAGATGGAA+TGG | 0.522058 | 1:+25390040 | MsG0180001691.01.T01:CDS |
| GTTAAGATGATGATGACCAT+TGG | 0.525117 | 1:+25391438 | MsG0180001691.01.T01:CDS |
| GAAGCAGATTTGGACGGTGA+TGG | 0.535179 | 1:+25391393 | MsG0180001691.01.T01:CDS |
| TGAGACAAGTATGATCAATT+GGG | 0.537602 | 1:+25391330 | MsG0180001691.01.T01:intron |
| ATAAACGAGGTTGATGCAGA+TGG | 0.555436 | 1:+25390035 | MsG0180001691.01.T01:CDS |
| CTTGTTTGACAAGATGGAGA+TGG | 0.585467 | 1:+25389708 | MsG0180001691.01.T01:CDS |
| AAAATTAACTGATGAAGAGG+TGG | 0.600647 | 1:+25391356 | MsG0180001691.01.T01:CDS |
| ATTAAAGAAGCAGATTTGGA+CGG | 0.618310 | 1:+25391387 | MsG0180001691.01.T01:CDS |
| GCTCCAAGAAATGATAAACG+AGG | 0.724641 | 1:+25390022 | MsG0180001691.01.T01:CDS |
| ATTGGATCAAAACCCAACAG+AGG | 0.725937 | 1:+25389996 | MsG0180001691.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATTGAAATGAAATAT+GGG | - | Chr1:25389767-25389786 | None:intergenic | 10.0% |
| !! | TATATAATTGAAATGAAATA+TGG | - | Chr1:25389768-25389787 | None:intergenic | 10.0% |
| !!! | AATTTTTTTCATAGTTTTAA+TGG | - | Chr1:25390921-25390940 | None:intergenic | 10.0% |
| !! | ATAACAAAGAAGTTAAATAA+GGG | - | Chr1:25390659-25390678 | None:intergenic | 15.0% |
| !! | CTTTATGATTAATCTTTAAT+AGG | + | Chr1:25389934-25389953 | MsG0180001691.01.T01:intron | 15.0% |
| !! | TATAACAAAGAAGTTAAATA+AGG | - | Chr1:25390660-25390679 | None:intergenic | 15.0% |
| !! | TATAATTGAAATGAAATATG+GGG | - | Chr1:25389766-25389785 | None:intergenic | 15.0% |
| !!! | ACAATTTTCATATTAGTTTA+AGG | - | Chr1:25389866-25389885 | None:intergenic | 15.0% |
| !!! | ACAATTTTTTTTCTTGTATA+TGG | + | Chr1:25390555-25390574 | MsG0180001691.01.T01:intron | 15.0% |
| !!! | TTATTTAACTTCTTTGTTAT+AGG | + | Chr1:25390659-25390678 | MsG0180001691.01.T01:intron | 15.0% |
| !! | AAAAATTTATTGAAGCATAG+AGG | + | Chr1:25390934-25390953 | MsG0180001691.01.T01:intron | 20.0% |
| !! | ATGTATTATGATAGATTTCA+TGG | + | Chr1:25390593-25390612 | MsG0180001691.01.T01:intron | 20.0% |
| !! | CAACAAAAAAAAAAACTTCA+TGG | + | Chr1:25390630-25390649 | MsG0180001691.01.T01:intron | 20.0% |
| !! | CATTATTGTAAGAAATGAAA+AGG | - | Chr1:25390126-25390145 | None:intergenic | 20.0% |
| !! | TAACAAAGAAGTTAAATAAG+GGG | - | Chr1:25390658-25390677 | None:intergenic | 20.0% |
| !! | TAATACTGTATAAGTGTAAT+GGG | - | Chr1:25390527-25390546 | None:intergenic | 20.0% |
| !! | TACACTTATACAGTATTAAA+TGG | + | Chr1:25390529-25390548 | MsG0180001691.01.T01:intron | 20.0% |
| !! | TTAATACTGTATAAGTGTAA+TGG | - | Chr1:25390528-25390547 | None:intergenic | 20.0% |
| !!! | GAATAATTACTTTCATTTTC+TGG | - | Chr1:25390100-25390119 | None:intergenic | 20.0% |
| !!! | GGTTTTTGATAAAGATAAAA+TGG | + | Chr1:25390236-25390255 | MsG0180001691.01.T01:intron | 20.0% |
| !!! | TTTTCTTGTATATGGAAAAA+AGG | + | Chr1:25390563-25390582 | MsG0180001691.01.T01:intron | 20.0% |
| !!! | TTTTTTTGTTGAATGAATGA+GGG | - | Chr1:25390621-25390640 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTTGAATGAATG+AGG | - | Chr1:25390622-25390641 | None:intergenic | 20.0% |
| ! | AAAAAAATCTCTTGCAACAA+AGG | - | Chr1:25390986-25391005 | None:intergenic | 25.0% |
| ! | AACAAAGAAGTTAAATAAGG+GGG | - | Chr1:25390657-25390676 | None:intergenic | 25.0% |
| ! | ACGAGTTTCACATAATTATA+CGG | - | Chr1:25390387-25390406 | None:intergenic | 25.0% |
| ! | ATATTGTCAACAATCAAAGA+AGG | - | Chr1:25389801-25389820 | None:intergenic | 25.0% |
| ! | GAAAAACATTCAACTTCTAT+AGG | - | Chr1:25391010-25391029 | None:intergenic | 25.0% |
| ! | TGAAAAATTAACTGATGAAG+AGG | + | Chr1:25391353-25391372 | MsG0180001691.01.T01:CDS | 25.0% |
| !! | CTATTATTATTCATCGATTG+CGG | - | Chr1:25391158-25391177 | None:intergenic | 25.0% |
| !! | TAACTTCTTTGTTATAGGAT+TGG | + | Chr1:25390664-25390683 | MsG0180001691.01.T01:intron | 25.0% |
| !! | TATATCAATATTTTCCTCTC+CGG | + | Chr1:25390279-25390298 | MsG0180001691.01.T01:intron | 25.0% |
| AAAATTAACTGATGAAGAGG+TGG | + | Chr1:25391356-25391375 | MsG0180001691.01.T01:CDS | 30.0% | |
| AAGAACTTGCAACTGTAATT+AGG | + | Chr1:25389971-25389990 | MsG0180001691.01.T01:intron | 30.0% | |
| ACAAAGAAGTTAAATAAGGG+GGG | - | Chr1:25390656-25390675 | None:intergenic | 30.0% | |
| ATATTGATATACCTCACTAG+CGG | - | Chr1:25390270-25390289 | None:intergenic | 30.0% | |
| ATGCACATTAATTTCACACA+TGG | + | Chr1:25391064-25391083 | MsG0180001691.01.T01:intron | 30.0% | |
| ATTAAAGAAGCAGATTTGGA+CGG | + | Chr1:25391387-25391406 | MsG0180001691.01.T01:CDS | 30.0% | |
| CACATACACACATATAAGTT+TGG | + | Chr1:25389889-25389908 | MsG0180001691.01.T01:intron | 30.0% | |
| CTTCTTTGATCTCAACAATT+TGG | - | Chr1:25389681-25389700 | None:intergenic | 30.0% | |
| GATGATTAAAGAAGCAGATT+TGG | + | Chr1:25391383-25391402 | MsG0180001691.01.T01:CDS | 30.0% | |
| GTTATCTAAACATGCATAAC+CGG | - | Chr1:25390301-25390320 | None:intergenic | 30.0% | |
| TCCAGAATCAACAAATTCAA+TGG | - | Chr1:25390068-25390087 | None:intergenic | 30.0% | |
| TGAGACAAGTATGATCAATT+GGG | + | Chr1:25391330-25391349 | MsG0180001691.01.T01:intron | 30.0% | |
| TTGAGACAAGTATGATCAAT+TGG | + | Chr1:25391329-25391348 | MsG0180001691.01.T01:intron | 30.0% | |
| TTTAATAGGTTGCATTACTG+TGG | + | Chr1:25389948-25389967 | MsG0180001691.01.T01:intron | 30.0% | |
| ! | AAGAAAAAAGTGTGATGGAA+AGG | - | Chr1:25390493-25390512 | None:intergenic | 30.0% |
| ! | CACTTAAGAAAAAAGTGTGA+TGG | - | Chr1:25390498-25390517 | None:intergenic | 30.0% |
| !! | ACCATTGAATTTGTTGATTC+TGG | + | Chr1:25390064-25390083 | MsG0180001691.01.T01:CDS | 30.0% |
| !! | TTGTTGATTCTGGAACTTAA+TGG | + | Chr1:25390074-25390093 | MsG0180001691.01.T01:CDS | 30.0% |
| ACACTTCTTCAATCAACTAG+AGG | + | Chr1:25391114-25391133 | MsG0180001691.01.T01:intron | 35.0% | |
| CAACCTCGTTTATCATTTCT+TGG | - | Chr1:25390028-25390047 | None:intergenic | 35.0% | |
| CATCTTGTCAAACAAGCAAA+AGG | - | Chr1:25389704-25389723 | None:intergenic | 35.0% | |
| GAAGATCTCAAAGAGCTTTA+AGG | + | Chr1:25390215-25390234 | MsG0180001691.01.T01:intron | 35.0% | |
| TGCAACTGTAATTAGGTCAT+TGG | + | Chr1:25389978-25389997 | MsG0180001691.01.T01:intron | 35.0% | |
| ! | ATTATTCATCGATTGCGGAA+AGG | - | Chr1:25391153-25391172 | None:intergenic | 35.0% |
| ! | CTTTTGCTTGTTTGACAAGA+TGG | + | Chr1:25389702-25389721 | MsG0180001691.01.T01:CDS | 35.0% |
| ! | GTTAAGATGATGATGACCAT+TGG | + | Chr1:25391438-25391457 | MsG0180001691.01.T01:CDS | 35.0% |
| ATCTCTTGCAACAAAGGAAC+AGG | - | Chr1:25390980-25390999 | None:intergenic | 40.0% | |
| ATTGGATCAAAACCCAACAG+AGG | + | Chr1:25389996-25390015 | MsG0180001691.01.T01:CDS | 40.0% | |
| CTGCATCAGTTTCCAAATGA+GGG | - | Chr1:25390193-25390212 | None:intergenic | 40.0% | |
| CTTGTTTGACAAGATGGAGA+TGG | + | Chr1:25389708-25389727 | MsG0180001691.01.T01:CDS | 40.0% | |
| GCTCCAAGAAATGATAAACG+AGG | + | Chr1:25390022-25390041 | MsG0180001691.01.T01:CDS | 40.0% | |
| TCGTTGTCATGCAATTGTGT+AGG | + | Chr1:25390403-25390422 | MsG0180001691.01.T01:intron | 40.0% | |
| TCTGCATCAGTTTCCAAATG+AGG | - | Chr1:25390194-25390213 | None:intergenic | 40.0% | |
| TGCATCAGTTTCCAAATGAG+GGG | - | Chr1:25390192-25390211 | None:intergenic | 40.0% | |
| TGGTTATATTTCCGCTAGTG+AGG | + | Chr1:25390256-25390275 | MsG0180001691.01.T01:intron | 40.0% | |
| !! | ATAAACGAGGTTGATGCAGA+TGG | + | Chr1:25390035-25390054 | MsG0180001691.01.T01:CDS | 40.0% |
| !! | TCTATTTTTCCCCCCTCATT+TGG | + | Chr1:25390178-25390197 | MsG0180001691.01.T01:intron | 40.0% |
| CATCAGTTTCCAAATGAGGG+GGG | - | Chr1:25390190-25390209 | None:intergenic | 45.0% | |
| CTAAACATGCATAACCGGAG+AGG | - | Chr1:25390296-25390315 | None:intergenic | 45.0% | |
| GCATCAGTTTCCAAATGAGG+GGG | - | Chr1:25390191-25390210 | None:intergenic | 45.0% | |
| !!! | AATAATAAAAAAATTTTTTG+AGG | + | Chr1:25390828-25390847 | MsG0180001691.01.T01:intron | 5.0% |
| !!! | ATAATAAAAAAATTTTTTGA+GGG | + | Chr1:25390829-25390848 | MsG0180001691.01.T01:intron | 5.0% |
| GAAGCAGATTTGGACGGTGA+TGG | + | Chr1:25391393-25391412 | MsG0180001691.01.T01:CDS | 50.0% | |
| TCTTGGAGCTCTCCTCTGTT+GGG | - | Chr1:25390011-25390030 | None:intergenic | 50.0% | |
| TTCTTGGAGCTCTCCTCTGT+TGG | - | Chr1:25390012-25390031 | None:intergenic | 50.0% | |
| !! | CGAGGTTGATGCAGATGGAA+TGG | + | Chr1:25390040-25390059 | MsG0180001691.01.T01:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 25389655 | 25391464 | 25389655 | ID=MsG0180001691.01;Name=MsG0180001691.01 |
| Chr1 | mRNA | 25389655 | 25391464 | 25389655 | ID=MsG0180001691.01.T01;Parent=MsG0180001691.01;Name=MsG0180001691.01.T01;_AED=0.24;_eAED=0.37;_QI=0|0|0|1|0|0|3|0|105 |
| Chr1 | exon | 25389655 | 25389729 | 25389655 | ID=MsG0180001691.01.T01:exon:18442;Parent=MsG0180001691.01.T01 |
| Chr1 | exon | 25389993 | 25390109 | 25389993 | ID=MsG0180001691.01.T01:exon:18443;Parent=MsG0180001691.01.T01 |
| Chr1 | exon | 25391339 | 25391464 | 25391339 | ID=MsG0180001691.01.T01:exon:18444;Parent=MsG0180001691.01.T01 |
| Chr1 | CDS | 25389655 | 25389729 | 25389655 | ID=MsG0180001691.01.T01:cds;Parent=MsG0180001691.01.T01 |
| Chr1 | CDS | 25389993 | 25390109 | 25389993 | ID=MsG0180001691.01.T01:cds;Parent=MsG0180001691.01.T01 |
| Chr1 | CDS | 25391339 | 25391464 | 25391339 | ID=MsG0180001691.01.T01:cds;Parent=MsG0180001691.01.T01 |
| Gene Sequence |
| Protein sequence |
