Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046768.01.T01 | XP_003609303.1 | 96.863 | 255 | 8 | 0 | 9 | 263 | 66 | 320 | 0 | 511 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046768.01.T01 | O80822 | 74.118 | 255 | 66 | 0 | 9 | 263 | 74 | 328 | 2.65E-141 | 402 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046768.01.T01 | G7JCW8 | 96.863 | 255 | 8 | 0 | 9 | 263 | 66 | 320 | 0.0 | 511 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049029.01 | MsG0880046768.01 | -0.811918 | 5.503727e-51 | 3.450323e-48 |
| MsG0080049072.01 | MsG0880046768.01 | -0.802441 | 5.602067e-49 | 2.744396e-46 |
| MsG0180000899.01 | MsG0880046768.01 | 0.800418 | 1.454932e-48 | 6.771327e-46 |
| MsG0880044026.01 | MsG0880046768.01 | 0.805269 | 1.448234e-49 | 7.628577e-47 |
| MsG0880044312.01 | MsG0880046768.01 | -0.800978 | 1.118434e-48 | 5.279876e-46 |
| MsG0880046038.01 | MsG0880046768.01 | 0.805391 | 1.365608e-49 | 7.215948e-47 |
| MsG0880046212.01 | MsG0880046768.01 | 0.818540 | 1.858797e-52 | 1.395301e-49 |
| MsG0880046267.01 | MsG0880046768.01 | -0.828476 | 8.801774e-55 | 8.758517e-52 |
| MsG0880046403.01 | MsG0880046768.01 | 0.802182 | 6.332831e-49 | 3.081925e-46 |
| MsG0880046768.01 | MsG0880047312.01 | 0.805020 | 1.633278e-49 | 8.548388e-47 |
| MsG0180003237.01 | MsG0880046768.01 | 0.803921 | 2.768028e-49 | 1.408450e-46 |
| MsG0180003933.01 | MsG0880046768.01 | -0.801115 | 1.048450e-48 | 4.966515e-46 |
| MsG0180004424.01 | MsG0880046768.01 | 0.841628 | 4.233530e-58 | 6.257680e-55 |
| MsG0180004739.01 | MsG0880046768.01 | -0.815861 | 7.440039e-52 | 5.189242e-49 |
| MsG0180005127.01 | MsG0880046768.01 | 0.800511 | 1.392870e-48 | 6.497463e-46 |
| MsG0180005130.01 | MsG0880046768.01 | 0.830246 | 3.272484e-55 | 3.428867e-52 |
| MsG0180005143.01 | MsG0880046768.01 | 0.826994 | 1.998072e-54 | 1.904086e-51 |
| MsG0180005822.01 | MsG0880046768.01 | -0.803013 | 4.268686e-49 | 2.121719e-46 |
| MsG0180005879.01 | MsG0880046768.01 | -0.817655 | 2.945709e-52 | 2.158032e-49 |
| MsG0180005961.01 | MsG0880046768.01 | -0.808288 | 3.333425e-50 | 1.898546e-47 |
| MsG0180006253.01 | MsG0880046768.01 | 0.801611 | 8.297095e-49 | 3.979603e-46 |
| MsG0780041447.01 | MsG0880046768.01 | 0.856146 | 3.919047e-62 | 9.262891e-59 |
| MsG0880042500.01 | MsG0880046768.01 | -0.801255 | 9.816288e-49 | 4.666349e-46 |
| MsG0880042877.01 | MsG0880046768.01 | 0.836296 | 1.016887e-56 | 1.276250e-53 |
| MsG0880043459.01 | MsG0880046768.01 | 0.815500 | 8.956564e-52 | 6.185958e-49 |
| MsG0280010623.01 | MsG0880046768.01 | 0.802296 | 6.000573e-49 | 2.928913e-46 |
| MsG0280010661.01 | MsG0880046768.01 | -0.803397 | 3.555667e-49 | 1.784916e-46 |
| MsG0280010926.01 | MsG0880046768.01 | -0.801411 | 9.119796e-49 | 4.352255e-46 |
| MsG0380012254.01 | MsG0880046768.01 | 0.806649 | 7.424189e-50 | 4.051113e-47 |
| MsG0680032026.01 | MsG0880046768.01 | 0.872247 | 3.682651e-67 | 1.530157e-63 |
| MsG0680032055.01 | MsG0880046768.01 | -0.805640 | 1.210797e-49 | 6.439137e-47 |
| MsG0680032461.01 | MsG0880046768.01 | 0.844002 | 9.901550e-59 | 1.576904e-55 |
| MsG0480018693.01 | MsG0880046768.01 | 0.809653 | 1.701330e-50 | 1.004666e-47 |
| MsG0480019348.01 | MsG0880046768.01 | 0.801015 | 1.098954e-48 | 5.192892e-46 |
| MsG0480020350.01 | MsG0880046768.01 | -0.802686 | 4.985919e-49 | 2.457847e-46 |
| MsG0480020753.01 | MsG0880046768.01 | -0.809777 | 1.600308e-50 | 9.481248e-48 |
| MsG0480021254.01 | MsG0880046768.01 | -0.806319 | 8.713490e-50 | 4.715111e-47 |
| MsG0480021346.01 | MsG0880046768.01 | -0.814267 | 1.681037e-51 | 1.122739e-48 |
| MsG0480021682.01 | MsG0880046768.01 | -0.805410 | 1.352798e-49 | 7.151965e-47 |
| MsG0480023102.01 | MsG0880046768.01 | 0.819292 | 1.253801e-52 | 9.608685e-50 |
| MsG0580024782.01 | MsG0880046768.01 | 0.820524 | 6.554770e-53 | 5.198519e-50 |
| MsG0580024982.01 | MsG0880046768.01 | -0.828461 | 8.876034e-55 | 8.828730e-52 |
| MsG0580024994.01 | MsG0880046768.01 | 0.829034 | 6.450897e-55 | 6.523814e-52 |
| MsG0580025007.01 | MsG0880046768.01 | 0.803923 | 2.764817e-49 | 1.406909e-46 |
| MsG0580025024.01 | MsG0880046768.01 | 0.834062 | 3.723679e-56 | 4.369376e-53 |
| MsG0380016458.01 | MsG0880046768.01 | 0.811175 | 7.984536e-51 | 4.908254e-48 |
| MsG0380016836.01 | MsG0880046768.01 | -0.822163 | 2.743778e-53 | 2.278488e-50 |
| MsG0580027751.01 | MsG0880046768.01 | 0.818135 | 2.295061e-52 | 1.703637e-49 |
| MsG0580027887.01 | MsG0880046768.01 | -0.801199 | 1.007699e-48 | 4.783503e-46 |
| MsG0580029291.01 | MsG0880046768.01 | 0.819750 | 9.859935e-53 | 7.653890e-50 |
| MsG0280006607.01 | MsG0880046768.01 | -0.805988 | 1.023073e-49 | 5.489815e-47 |
| MsG0280006668.01 | MsG0880046768.01 | 0.830543 | 2.768306e-55 | 2.925431e-52 |
| MsG0280007869.01 | MsG0880046768.01 | 0.822889 | 1.860408e-53 | 1.577259e-50 |
| MsG0280008178.01 | MsG0880046768.01 | 0.834490 | 2.907789e-56 | 3.456297e-53 |
| MsG0280008180.01 | MsG0880046768.01 | 0.819951 | 8.866791e-53 | 6.921932e-50 |
| MsG0280009673.01 | MsG0880046768.01 | 0.809960 | 1.461678e-50 | 8.701337e-48 |
| MsG0280010410.01 | MsG0880046768.01 | 0.803672 | 3.117724e-49 | 1.576107e-46 |
| MsG0280010417.01 | MsG0880046768.01 | 0.844510 | 7.229227e-59 | 1.169785e-55 |
| MsG0780036507.01 | MsG0880046768.01 | 0.810441 | 1.150775e-50 | 6.937145e-48 |
| MsG0780037436.01 | MsG0880046768.01 | -0.803251 | 3.811023e-49 | 1.905934e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046768.01.T01 | MTR_4g114210 | 96.863 | 255 | 8 | 0 | 9 | 263 | 66 | 320 | 0.0 | 511 |
| MsG0880046768.01.T01 | MTR_2g008710 | 60.784 | 255 | 99 | 1 | 9 | 263 | 72 | 325 | 2.57e-107 | 313 |
| MsG0880046768.01.T01 | MTR_2g008730 | 61.411 | 241 | 92 | 1 | 23 | 263 | 62 | 301 | 7.06e-101 | 296 |
| MsG0880046768.01.T01 | MTR_2g008160 | 50.781 | 256 | 124 | 2 | 9 | 263 | 69 | 323 | 3.15e-83 | 252 |
| MsG0880046768.01.T01 | MTR_4g125940 | 46.565 | 262 | 128 | 5 | 9 | 263 | 18 | 274 | 7.40e-73 | 224 |
| MsG0880046768.01.T01 | MTR_4g125940 | 46.565 | 262 | 128 | 5 | 9 | 263 | 73 | 329 | 3.35e-72 | 224 |
| MsG0880046768.01.T01 | MTR_7g093370 | 45.247 | 263 | 129 | 6 | 10 | 263 | 115 | 371 | 5.88e-68 | 215 |
| MsG0880046768.01.T01 | MTR_2g029830 | 42.697 | 267 | 139 | 6 | 5 | 263 | 1 | 261 | 8.63e-68 | 211 |
| MsG0880046768.01.T01 | MTR_2g040000 | 45.627 | 263 | 130 | 5 | 9 | 263 | 74 | 331 | 1.88e-67 | 212 |
| MsG0880046768.01.T01 | MTR_2g029815 | 43.346 | 263 | 135 | 6 | 9 | 263 | 74 | 330 | 2.02e-67 | 213 |
| MsG0880046768.01.T01 | MTR_2g028980 | 44.487 | 263 | 132 | 6 | 9 | 263 | 74 | 330 | 3.09e-67 | 212 |
| MsG0880046768.01.T01 | MTR_1g054205 | 43.511 | 262 | 135 | 5 | 10 | 263 | 70 | 326 | 1.81e-66 | 209 |
| MsG0880046768.01.T01 | MTR_2g029830 | 42.912 | 261 | 137 | 5 | 10 | 263 | 74 | 329 | 9.37e-66 | 209 |
| MsG0880046768.01.T01 | MTR_2g088770 | 44.402 | 259 | 136 | 5 | 9 | 263 | 71 | 325 | 1.36e-64 | 204 |
| MsG0880046768.01.T01 | MTR_2g029820 | 42.586 | 263 | 137 | 6 | 9 | 263 | 74 | 330 | 1.40e-64 | 206 |
| MsG0880046768.01.T01 | MTR_2g029560 | 41.985 | 262 | 140 | 6 | 9 | 263 | 69 | 325 | 1.92e-64 | 205 |
| MsG0880046768.01.T01 | MTR_2g029860 | 42.748 | 262 | 138 | 6 | 9 | 263 | 74 | 330 | 3.18e-64 | 204 |
| MsG0880046768.01.T01 | MTR_2g008160 | 42.969 | 256 | 109 | 2 | 9 | 263 | 69 | 288 | 4.54e-64 | 202 |
| MsG0880046768.01.T01 | MTR_2g029800 | 42.146 | 261 | 139 | 6 | 10 | 263 | 75 | 330 | 6.77e-64 | 204 |
| MsG0880046768.01.T01 | MTR_5g017850 | 42.692 | 260 | 139 | 4 | 9 | 263 | 72 | 326 | 1.14e-63 | 202 |
| MsG0880046768.01.T01 | MTR_5g022870 | 42.857 | 259 | 134 | 6 | 9 | 263 | 68 | 316 | 1.27e-63 | 202 |
| MsG0880046768.01.T01 | MTR_4g046713 | 42.308 | 260 | 140 | 4 | 9 | 263 | 72 | 326 | 2.12e-63 | 202 |
| MsG0880046768.01.T01 | MTR_2g084080 | 44.231 | 260 | 128 | 5 | 9 | 263 | 70 | 317 | 2.27e-63 | 201 |
| MsG0880046768.01.T01 | MTR_5g017860 | 42.692 | 260 | 139 | 4 | 9 | 263 | 72 | 326 | 2.89e-63 | 201 |
| MsG0880046768.01.T01 | MTR_2g029850 | 43.511 | 262 | 136 | 6 | 9 | 263 | 74 | 330 | 2.99e-62 | 199 |
| MsG0880046768.01.T01 | MTR_2g084110 | 43.846 | 260 | 129 | 5 | 9 | 263 | 70 | 317 | 5.43e-62 | 197 |
| MsG0880046768.01.T01 | MTR_7g107520 | 41.923 | 260 | 137 | 5 | 9 | 263 | 70 | 320 | 5.72e-62 | 198 |
| MsG0880046768.01.T01 | MTR_0155s0040 | 43.023 | 258 | 130 | 6 | 9 | 263 | 72 | 315 | 5.84e-62 | 197 |
| MsG0880046768.01.T01 | MTR_2g029750 | 42.748 | 262 | 138 | 5 | 9 | 263 | 74 | 330 | 9.87e-62 | 198 |
| MsG0880046768.01.T01 | MTR_2g029730 | 40.909 | 264 | 140 | 6 | 9 | 263 | 70 | 326 | 3.39e-61 | 196 |
| MsG0880046768.01.T01 | MTR_2g029740 | 41.762 | 261 | 142 | 5 | 9 | 263 | 74 | 330 | 6.74e-61 | 196 |
| MsG0880046768.01.T01 | MTR_3g092990 | 43.077 | 260 | 137 | 5 | 10 | 263 | 61 | 315 | 3.37e-60 | 193 |
| MsG0880046768.01.T01 | MTR_3g092990 | 42.912 | 261 | 138 | 5 | 9 | 263 | 71 | 326 | 5.61e-60 | 193 |
| MsG0880046768.01.T01 | MTR_7g086820 | 42.248 | 258 | 136 | 5 | 9 | 263 | 65 | 312 | 1.05e-59 | 192 |
| MsG0880046768.01.T01 | MTR_1g025980 | 41.961 | 255 | 135 | 5 | 9 | 259 | 69 | 314 | 1.87e-59 | 191 |
| MsG0880046768.01.T01 | MTR_7g029030 | 41.923 | 260 | 137 | 5 | 9 | 263 | 70 | 320 | 2.30e-59 | 191 |
| MsG0880046768.01.T01 | MTR_8g075100 | 42.205 | 263 | 130 | 6 | 9 | 263 | 71 | 319 | 3.56e-59 | 191 |
| MsG0880046768.01.T01 | MTR_3g094650 | 41.985 | 262 | 133 | 7 | 9 | 263 | 73 | 322 | 1.09e-58 | 189 |
| MsG0880046768.01.T01 | MTR_2g084020 | 42.529 | 261 | 132 | 6 | 9 | 263 | 70 | 318 | 1.69e-58 | 189 |
| MsG0880046768.01.T01 | MTR_5g083860 | 42.366 | 262 | 132 | 7 | 9 | 263 | 76 | 325 | 1.90e-58 | 189 |
| MsG0880046768.01.T01 | MTR_4g029200 | 41.923 | 260 | 134 | 5 | 9 | 263 | 91 | 338 | 3.76e-58 | 188 |
| MsG0880046768.01.T01 | MTR_5g021060 | 42.146 | 261 | 140 | 6 | 9 | 263 | 75 | 330 | 3.87e-58 | 188 |
| MsG0880046768.01.T01 | MTR_1g101830 | 40.698 | 258 | 143 | 4 | 9 | 263 | 72 | 322 | 3.97e-58 | 188 |
| MsG0880046768.01.T01 | MTR_2g084010 | 43.295 | 261 | 130 | 6 | 9 | 263 | 70 | 318 | 4.91e-58 | 187 |
| MsG0880046768.01.T01 | MTR_2g437770 | 39.844 | 256 | 144 | 3 | 9 | 263 | 95 | 341 | 1.37e-57 | 187 |
| MsG0880046768.01.T01 | MTR_6g027440 | 43.798 | 258 | 131 | 6 | 10 | 263 | 67 | 314 | 4.04e-57 | 185 |
| MsG0880046768.01.T01 | MTR_2g084090 | 42.912 | 261 | 131 | 6 | 9 | 263 | 70 | 318 | 8.71e-57 | 184 |
| MsG0880046768.01.T01 | MTR_4g133800 | 40.234 | 256 | 144 | 3 | 9 | 263 | 86 | 333 | 9.75e-57 | 185 |
| MsG0880046768.01.T01 | MTR_1g038680 | 41.199 | 267 | 137 | 8 | 9 | 263 | 74 | 332 | 1.95e-56 | 184 |
| MsG0880046768.01.T01 | MTR_7g072480 | 40.385 | 260 | 138 | 5 | 9 | 263 | 69 | 316 | 2.32e-56 | 183 |
| MsG0880046768.01.T01 | MTR_2g029910 | 41.825 | 263 | 140 | 7 | 9 | 263 | 75 | 332 | 2.53e-56 | 184 |
| MsG0880046768.01.T01 | MTR_4g083710 | 42.803 | 264 | 131 | 8 | 9 | 263 | 72 | 324 | 7.42e-56 | 182 |
| MsG0880046768.01.T01 | MTR_8g062780 | 43.295 | 261 | 136 | 5 | 10 | 263 | 69 | 324 | 1.13e-55 | 182 |
| MsG0880046768.01.T01 | MTR_1g086320 | 42.045 | 264 | 139 | 6 | 9 | 263 | 75 | 333 | 1.37e-55 | 182 |
| MsG0880046768.01.T01 | MTR_4g029190 | 40.385 | 260 | 140 | 6 | 9 | 263 | 91 | 340 | 1.62e-55 | 182 |
| MsG0880046768.01.T01 | MTR_1g115900 | 42.748 | 262 | 131 | 7 | 9 | 263 | 72 | 321 | 3.52e-55 | 181 |
| MsG0880046768.01.T01 | MTR_1g009750 | 38.931 | 262 | 148 | 5 | 9 | 263 | 72 | 328 | 4.76e-55 | 180 |
| MsG0880046768.01.T01 | MTR_7g072510 | 40.000 | 260 | 139 | 5 | 9 | 263 | 65 | 312 | 5.85e-55 | 179 |
| MsG0880046768.01.T01 | MTR_3g072190 | 40.385 | 260 | 138 | 4 | 9 | 263 | 4 | 251 | 6.29e-55 | 177 |
| MsG0880046768.01.T01 | MTR_1g090760 | 38.491 | 265 | 150 | 5 | 7 | 263 | 71 | 330 | 6.84e-55 | 180 |
| MsG0880046768.01.T01 | MTR_2g099175 | 39.615 | 260 | 145 | 5 | 10 | 263 | 82 | 335 | 9.52e-55 | 180 |
| MsG0880046768.01.T01 | MTR_2g084000 | 40.769 | 260 | 136 | 6 | 10 | 263 | 72 | 319 | 1.05e-54 | 179 |
| MsG0880046768.01.T01 | MTR_3g094630 | 43.893 | 262 | 128 | 7 | 9 | 263 | 73 | 322 | 2.24e-54 | 178 |
| MsG0880046768.01.T01 | MTR_8g076820 | 41.762 | 261 | 141 | 6 | 9 | 263 | 75 | 330 | 2.40e-54 | 179 |
| MsG0880046768.01.T01 | MTR_3g072190 | 40.385 | 260 | 138 | 4 | 9 | 263 | 71 | 318 | 6.44e-54 | 177 |
| MsG0880046768.01.T01 | MTR_5g074970 | 39.015 | 264 | 140 | 6 | 9 | 263 | 75 | 326 | 6.62e-54 | 177 |
| MsG0880046768.01.T01 | MTR_3g094670 | 43.130 | 262 | 130 | 7 | 9 | 263 | 73 | 322 | 7.31e-54 | 177 |
| MsG0880046768.01.T01 | MTR_2g067440 | 36.842 | 285 | 144 | 6 | 9 | 261 | 105 | 385 | 1.35e-53 | 178 |
| MsG0880046768.01.T01 | MTR_4g127670 | 40.000 | 260 | 146 | 4 | 9 | 263 | 69 | 323 | 1.48e-53 | 176 |
| MsG0880046768.01.T01 | MTR_3g466200 | 41.221 | 262 | 134 | 7 | 10 | 263 | 71 | 320 | 2.21e-53 | 176 |
| MsG0880046768.01.T01 | MTR_2g078610 | 36.806 | 288 | 143 | 5 | 9 | 261 | 121 | 404 | 2.74e-53 | 178 |
| MsG0880046768.01.T01 | MTR_2g077990 | 36.678 | 289 | 144 | 6 | 9 | 262 | 121 | 405 | 7.31e-53 | 177 |
| MsG0880046768.01.T01 | MTR_5g016010 | 40.458 | 262 | 139 | 7 | 9 | 260 | 72 | 326 | 1.29e-52 | 174 |
| MsG0880046768.01.T01 | MTR_5g049280 | 39.850 | 266 | 143 | 9 | 9 | 263 | 78 | 337 | 1.69e-52 | 174 |
| MsG0880046768.01.T01 | MTR_4g029170 | 40.840 | 262 | 136 | 6 | 9 | 263 | 72 | 321 | 2.66e-52 | 173 |
| MsG0880046768.01.T01 | MTR_4g122640 | 39.615 | 260 | 144 | 6 | 10 | 263 | 84 | 336 | 2.66e-52 | 173 |
| MsG0880046768.01.T01 | MTR_1g077000 | 38.372 | 258 | 142 | 4 | 9 | 263 | 84 | 327 | 3.57e-52 | 173 |
| MsG0880046768.01.T01 | MTR_7g086870 | 40.927 | 259 | 135 | 6 | 9 | 263 | 67 | 311 | 7.69e-52 | 171 |
| MsG0880046768.01.T01 | MTR_1g086490 | 40.293 | 273 | 138 | 7 | 9 | 263 | 75 | 340 | 1.31e-51 | 172 |
| MsG0880046768.01.T01 | MTR_4g074995 | 41.825 | 263 | 122 | 9 | 9 | 263 | 69 | 308 | 1.42e-51 | 171 |
| MsG0880046768.01.T01 | MTR_4g095450 | 39.231 | 260 | 140 | 6 | 9 | 260 | 72 | 321 | 3.26e-51 | 170 |
| MsG0880046768.01.T01 | MTR_4g087965 | 42.366 | 262 | 136 | 7 | 9 | 260 | 87 | 343 | 6.08e-51 | 170 |
| MsG0880046768.01.T01 | MTR_4g029180 | 39.695 | 262 | 139 | 6 | 9 | 263 | 72 | 321 | 1.01e-50 | 169 |
| MsG0880046768.01.T01 | MTR_7g026990 | 40.000 | 260 | 138 | 7 | 9 | 263 | 76 | 322 | 1.21e-49 | 166 |
| MsG0880046768.01.T01 | MTR_2g067450 | 37.838 | 259 | 150 | 4 | 9 | 261 | 55 | 308 | 1.99e-49 | 165 |
| MsG0880046768.01.T01 | MTR_6g043240 | 38.911 | 257 | 143 | 5 | 9 | 263 | 87 | 331 | 2.75e-48 | 163 |
| MsG0880046768.01.T01 | MTR_4g074990 | 41.065 | 263 | 121 | 9 | 9 | 263 | 69 | 305 | 3.68e-48 | 162 |
| MsG0880046768.01.T01 | MTR_1g022970 | 41.221 | 262 | 142 | 6 | 9 | 263 | 91 | 347 | 4.34e-48 | 163 |
| MsG0880046768.01.T01 | MTR_5g014100 | 39.326 | 267 | 142 | 8 | 10 | 263 | 72 | 331 | 4.58e-48 | 162 |
| MsG0880046768.01.T01 | MTR_2g078280 | 36.232 | 276 | 137 | 6 | 9 | 249 | 121 | 392 | 1.15e-47 | 163 |
| MsG0880046768.01.T01 | MTR_4g031140 | 38.224 | 259 | 147 | 6 | 10 | 263 | 74 | 324 | 1.21e-47 | 161 |
| MsG0880046768.01.T01 | MTR_0147s0010 | 38.583 | 254 | 129 | 6 | 29 | 261 | 133 | 380 | 2.53e-47 | 162 |
| MsG0880046768.01.T01 | MTR_4g030890 | 39.080 | 261 | 142 | 6 | 10 | 263 | 146 | 396 | 4.69e-47 | 162 |
| MsG0880046768.01.T01 | MTR_3g466180 | 40.000 | 260 | 139 | 5 | 9 | 263 | 76 | 323 | 1.58e-45 | 155 |
| MsG0880046768.01.T01 | MTR_3g105790 | 37.548 | 261 | 149 | 5 | 9 | 263 | 70 | 322 | 7.60e-45 | 154 |
| MsG0880046768.01.T01 | MTR_5g074860 | 38.023 | 263 | 140 | 10 | 9 | 261 | 74 | 323 | 1.35e-44 | 153 |
| MsG0880046768.01.T01 | MTR_5g074760 | 37.879 | 264 | 141 | 9 | 10 | 263 | 71 | 321 | 7.70e-43 | 148 |
| MsG0880046768.01.T01 | MTR_4g132110 | 35.878 | 262 | 151 | 5 | 9 | 263 | 77 | 328 | 8.57e-43 | 149 |
| MsG0880046768.01.T01 | MTR_1g009750 | 35.000 | 260 | 144 | 6 | 9 | 263 | 72 | 311 | 1.03e-42 | 148 |
| MsG0880046768.01.T01 | MTR_6g043460 | 36.328 | 256 | 146 | 5 | 9 | 259 | 81 | 324 | 1.77e-42 | 148 |
| MsG0880046768.01.T01 | MTR_5g033470 | 36.742 | 264 | 152 | 7 | 10 | 263 | 119 | 377 | 1.88e-42 | 149 |
| MsG0880046768.01.T01 | MTR_6g043280 | 36.047 | 258 | 149 | 6 | 10 | 263 | 87 | 332 | 1.98e-42 | 147 |
| MsG0880046768.01.T01 | MTR_5g074740 | 38.636 | 264 | 139 | 9 | 10 | 263 | 71 | 321 | 3.30e-42 | 147 |
| MsG0880046768.01.T01 | MTR_4g074980 | 38.077 | 260 | 121 | 9 | 9 | 263 | 70 | 294 | 8.98e-42 | 145 |
| MsG0880046768.01.T01 | MTR_5g074710 | 37.121 | 264 | 143 | 9 | 10 | 263 | 71 | 321 | 1.34e-41 | 145 |
| MsG0880046768.01.T01 | MTR_3g467600 | 38.491 | 265 | 141 | 8 | 9 | 263 | 72 | 324 | 1.45e-41 | 145 |
| MsG0880046768.01.T01 | MTR_3g105790 | 37.008 | 254 | 146 | 5 | 16 | 263 | 1 | 246 | 1.84e-41 | 143 |
| MsG0880046768.01.T01 | MTR_4g132110 | 35.955 | 267 | 149 | 7 | 9 | 263 | 77 | 333 | 7.89e-41 | 144 |
| MsG0880046768.01.T01 | MTR_0286s0010 | 35.955 | 267 | 151 | 7 | 7 | 263 | 78 | 334 | 5.62e-40 | 141 |
| MsG0880046768.01.T01 | MTR_6g008075 | 35.955 | 267 | 151 | 7 | 7 | 263 | 78 | 334 | 5.62e-40 | 141 |
| MsG0880046768.01.T01 | MTR_4g132490 | 35.741 | 263 | 152 | 7 | 9 | 263 | 74 | 327 | 1.11e-39 | 140 |
| MsG0880046768.01.T01 | MTR_4g074980 | 44.211 | 190 | 92 | 6 | 9 | 190 | 70 | 253 | 2.22e-39 | 137 |
| MsG0880046768.01.T01 | MTR_2g008160 | 48.611 | 144 | 63 | 2 | 9 | 151 | 69 | 202 | 3.26e-38 | 133 |
| MsG0880046768.01.T01 | MTR_1g066680 | 30.651 | 261 | 164 | 5 | 10 | 263 | 72 | 322 | 1.42e-34 | 127 |
| MsG0880046768.01.T01 | MTR_1g066710 | 30.153 | 262 | 166 | 5 | 9 | 263 | 72 | 323 | 2.07e-34 | 126 |
| MsG0880046768.01.T01 | MTR_1g066640 | 31.034 | 261 | 163 | 6 | 10 | 263 | 73 | 323 | 2.07e-34 | 126 |
| MsG0880046768.01.T01 | MTR_1g066380 | 31.679 | 262 | 162 | 6 | 9 | 263 | 4 | 255 | 4.20e-34 | 124 |
| MsG0880046768.01.T01 | MTR_2g077980 | 30.108 | 279 | 154 | 6 | 21 | 262 | 9 | 283 | 8.95e-33 | 121 |
| MsG0880046768.01.T01 | MTR_1g066380 | 31.298 | 262 | 163 | 6 | 9 | 263 | 72 | 323 | 1.02e-32 | 122 |
| MsG0880046768.01.T01 | MTR_5g074700 | 37.021 | 235 | 119 | 8 | 33 | 263 | 5 | 214 | 1.15e-32 | 119 |
| MsG0880046768.01.T01 | MTR_7g086790 | 35.979 | 189 | 98 | 4 | 8 | 193 | 14 | 182 | 1.09e-30 | 113 |
| MsG0880046768.01.T01 | MTR_2g078560 | 29.514 | 288 | 151 | 7 | 23 | 262 | 36 | 319 | 5.30e-30 | 115 |
| MsG0880046768.01.T01 | MTR_2g029880 | 36.548 | 197 | 107 | 6 | 70 | 263 | 7 | 188 | 6.80e-30 | 112 |
| MsG0880046768.01.T01 | MTR_7g072490 | 31.349 | 252 | 104 | 7 | 9 | 256 | 1 | 187 | 3.16e-28 | 107 |
| MsG0880046768.01.T01 | MTR_5g074860 | 31.298 | 262 | 118 | 11 | 10 | 261 | 75 | 284 | 7.87e-27 | 105 |
| MsG0880046768.01.T01 | MTR_4g114220 | 85.484 | 62 | 3 | 1 | 9 | 70 | 48 | 103 | 9.02e-27 | 101 |
| MsG0880046768.01.T01 | MTR_3g072210 | 35.385 | 195 | 111 | 5 | 72 | 263 | 56 | 238 | 3.07e-26 | 103 |
| MsG0880046768.01.T01 | MTR_6g048160 | 68.852 | 61 | 19 | 0 | 9 | 69 | 28 | 88 | 4.44e-24 | 93.2 |
| MsG0880046768.01.T01 | MTR_5g058120 | 31.928 | 166 | 97 | 3 | 94 | 259 | 6 | 155 | 1.30e-18 | 82.8 |
| MsG0880046768.01.T01 | MTR_7g086785 | 35.507 | 138 | 75 | 4 | 9 | 137 | 3 | 135 | 6.79e-15 | 70.1 |
| MsG0880046768.01.T01 | MTR_3g462850 | 31.690 | 142 | 85 | 6 | 124 | 259 | 10 | 145 | 2.80e-14 | 68.9 |
| MsG0880046768.01.T01 | MTR_6g071110 | 42.105 | 95 | 39 | 3 | 26 | 115 | 79 | 162 | 3.58e-12 | 63.5 |
| MsG0880046768.01.T01 | MTR_3g072260 | 55.556 | 63 | 24 | 2 | 9 | 67 | 71 | 133 | 4.78e-12 | 62.4 |
| MsG0880046768.01.T01 | MTR_1g089005 | 57.143 | 49 | 21 | 0 | 18 | 66 | 78 | 126 | 1.60e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046768.01.T01 | AT2G41480 | 74.118 | 255 | 66 | 0 | 9 | 263 | 74 | 328 | 2.70e-142 | 402 |
| MsG0880046768.01.T01 | AT5G64120 | 57.198 | 257 | 100 | 3 | 9 | 263 | 80 | 328 | 7.69e-99 | 292 |
| MsG0880046768.01.T01 | AT5G39580 | 54.086 | 257 | 109 | 5 | 9 | 263 | 70 | 319 | 2.51e-92 | 275 |
| MsG0880046768.01.T01 | AT5G64110 | 51.923 | 260 | 112 | 3 | 9 | 263 | 79 | 330 | 1.20e-88 | 266 |
| MsG0880046768.01.T01 | AT4G25980 | 48.828 | 256 | 130 | 1 | 9 | 263 | 71 | 326 | 3.33e-86 | 260 |
| MsG0880046768.01.T01 | AT5G64100 | 51.765 | 255 | 118 | 3 | 9 | 263 | 82 | 331 | 2.20e-82 | 250 |
| MsG0880046768.01.T01 | AT5G17820 | 44.314 | 255 | 132 | 3 | 9 | 263 | 69 | 313 | 3.90e-70 | 218 |
| MsG0880046768.01.T01 | AT1G77100 | 46.512 | 258 | 128 | 4 | 9 | 263 | 69 | 319 | 1.38e-69 | 217 |
| MsG0880046768.01.T01 | AT5G17820 | 44.314 | 255 | 132 | 3 | 9 | 263 | 122 | 366 | 6.32e-69 | 217 |
| MsG0880046768.01.T01 | AT1G05240 | 44.314 | 255 | 136 | 4 | 9 | 260 | 71 | 322 | 9.49e-68 | 213 |
| MsG0880046768.01.T01 | AT1G05250 | 44.314 | 255 | 136 | 4 | 9 | 260 | 71 | 322 | 9.49e-68 | 213 |
| MsG0880046768.01.T01 | AT5G19890 | 43.462 | 260 | 135 | 4 | 9 | 263 | 75 | 327 | 1.54e-67 | 212 |
| MsG0880046768.01.T01 | AT5G06720 | 43.893 | 262 | 135 | 6 | 9 | 263 | 77 | 333 | 3.98e-67 | 211 |
| MsG0880046768.01.T01 | AT1G05260 | 45.946 | 259 | 132 | 5 | 9 | 263 | 71 | 325 | 6.99e-67 | 211 |
| MsG0880046768.01.T01 | AT5G06730 | 44.061 | 261 | 134 | 6 | 10 | 263 | 79 | 334 | 5.52e-66 | 209 |
| MsG0880046768.01.T01 | AT3G21770 | 44.358 | 257 | 133 | 5 | 9 | 260 | 74 | 325 | 2.49e-63 | 201 |
| MsG0880046768.01.T01 | AT3G01190 | 42.802 | 257 | 139 | 5 | 9 | 263 | 71 | 321 | 2.58e-63 | 201 |
| MsG0880046768.01.T01 | AT4G36430 | 44.444 | 261 | 134 | 6 | 9 | 263 | 75 | 330 | 5.43e-63 | 201 |
| MsG0880046768.01.T01 | AT5G24070 | 41.985 | 262 | 141 | 3 | 7 | 263 | 80 | 335 | 7.93e-63 | 201 |
| MsG0880046768.01.T01 | AT5G42180 | 41.245 | 257 | 138 | 5 | 9 | 261 | 68 | 315 | 1.15e-62 | 199 |
| MsG0880046768.01.T01 | AT5G05340 | 44.867 | 263 | 124 | 7 | 9 | 263 | 75 | 324 | 2.04e-62 | 199 |
| MsG0880046768.01.T01 | AT4G11290 | 42.912 | 261 | 139 | 4 | 9 | 263 | 70 | 326 | 3.02e-62 | 199 |
| MsG0880046768.01.T01 | AT1G49570 | 44.231 | 260 | 130 | 7 | 9 | 259 | 93 | 346 | 1.31e-60 | 195 |
| MsG0880046768.01.T01 | AT5G15180 | 41.313 | 259 | 142 | 5 | 9 | 263 | 77 | 329 | 3.78e-60 | 193 |
| MsG0880046768.01.T01 | AT2G38390 | 40.684 | 263 | 143 | 6 | 9 | 263 | 76 | 333 | 6.99e-59 | 191 |
| MsG0880046768.01.T01 | AT5G19880 | 41.509 | 265 | 140 | 6 | 9 | 263 | 70 | 329 | 7.72e-59 | 190 |
| MsG0880046768.01.T01 | AT4G37530 | 40.840 | 262 | 142 | 5 | 10 | 263 | 73 | 329 | 9.27e-59 | 190 |
| MsG0880046768.01.T01 | AT1G14550 | 42.366 | 262 | 133 | 6 | 9 | 263 | 71 | 321 | 1.05e-58 | 189 |
| MsG0880046768.01.T01 | AT2G18150 | 41.379 | 261 | 142 | 5 | 9 | 263 | 81 | 336 | 1.78e-58 | 189 |
| MsG0880046768.01.T01 | AT3G03670 | 43.511 | 262 | 133 | 5 | 9 | 263 | 68 | 321 | 1.88e-58 | 189 |
| MsG0880046768.01.T01 | AT5G22410 | 42.745 | 255 | 134 | 5 | 10 | 259 | 74 | 321 | 1.91e-58 | 189 |
| MsG0880046768.01.T01 | AT2G38380 | 41.065 | 263 | 142 | 6 | 9 | 263 | 76 | 333 | 7.36e-58 | 188 |
| MsG0880046768.01.T01 | AT3G50990 | 41.538 | 260 | 141 | 5 | 10 | 263 | 87 | 341 | 1.02e-57 | 187 |
| MsG0880046768.01.T01 | AT5G51890 | 40.873 | 252 | 138 | 4 | 9 | 256 | 71 | 315 | 2.11e-57 | 186 |
| MsG0880046768.01.T01 | AT4G33870 | 37.329 | 292 | 139 | 5 | 9 | 261 | 113 | 399 | 7.26e-57 | 187 |
| MsG0880046768.01.T01 | AT2G43480 | 39.768 | 259 | 145 | 3 | 10 | 263 | 83 | 335 | 8.60e-57 | 185 |
| MsG0880046768.01.T01 | AT5G66390 | 40.230 | 261 | 145 | 5 | 9 | 263 | 78 | 333 | 9.83e-57 | 185 |
| MsG0880046768.01.T01 | AT2G18140 | 40.613 | 261 | 144 | 5 | 9 | 263 | 80 | 335 | 1.77e-56 | 184 |
| MsG0880046768.01.T01 | AT4G08770 | 40.684 | 263 | 142 | 7 | 10 | 263 | 70 | 327 | 3.36e-56 | 184 |
| MsG0880046768.01.T01 | AT4G30170 | 41.923 | 260 | 140 | 6 | 9 | 263 | 72 | 325 | 3.03e-55 | 181 |
| MsG0880046768.01.T01 | AT4G08780 | 41.065 | 263 | 141 | 8 | 10 | 263 | 70 | 327 | 8.78e-55 | 180 |
| MsG0880046768.01.T01 | AT1G68850 | 38.951 | 267 | 145 | 10 | 9 | 263 | 75 | 335 | 1.41e-54 | 179 |
| MsG0880046768.01.T01 | AT1G14540 | 40.385 | 260 | 138 | 6 | 10 | 263 | 67 | 315 | 1.64e-54 | 178 |
| MsG0880046768.01.T01 | AT3G32980 | 38.783 | 263 | 147 | 6 | 10 | 263 | 77 | 334 | 1.73e-54 | 179 |
| MsG0880046768.01.T01 | AT4G37520 | 38.722 | 266 | 144 | 6 | 9 | 263 | 72 | 329 | 5.38e-54 | 177 |
| MsG0880046768.01.T01 | AT1G44970 | 41.985 | 262 | 140 | 5 | 9 | 263 | 90 | 346 | 1.19e-53 | 177 |
| MsG0880046768.01.T01 | AT4G16270 | 41.538 | 260 | 139 | 6 | 10 | 263 | 96 | 348 | 1.71e-53 | 177 |
| MsG0880046768.01.T01 | AT1G71695 | 42.586 | 263 | 131 | 8 | 9 | 263 | 89 | 339 | 3.82e-53 | 176 |
| MsG0880046768.01.T01 | AT3G49110 | 38.783 | 263 | 147 | 6 | 10 | 263 | 79 | 336 | 8.78e-53 | 175 |
| MsG0880046768.01.T01 | AT2G18980 | 40.385 | 260 | 144 | 5 | 9 | 263 | 70 | 323 | 1.99e-52 | 173 |
| MsG0880046768.01.T01 | AT5G67400 | 38.550 | 262 | 148 | 5 | 10 | 263 | 73 | 329 | 3.35e-52 | 173 |
| MsG0880046768.01.T01 | AT4G31760 | 38.224 | 259 | 150 | 4 | 9 | 263 | 74 | 326 | 5.78e-52 | 172 |
| MsG0880046768.01.T01 | AT4G33420 | 38.760 | 258 | 141 | 4 | 9 | 263 | 82 | 325 | 6.00e-52 | 172 |
| MsG0880046768.01.T01 | AT5G14130 | 41.379 | 261 | 140 | 6 | 9 | 263 | 77 | 330 | 8.46e-52 | 172 |
| MsG0880046768.01.T01 | AT2G24800 | 39.231 | 260 | 147 | 6 | 9 | 263 | 76 | 329 | 1.31e-51 | 171 |
| MsG0880046768.01.T01 | AT1G30870 | 39.844 | 256 | 145 | 3 | 10 | 263 | 97 | 345 | 1.62e-51 | 172 |
| MsG0880046768.01.T01 | AT4G33420 | 38.760 | 258 | 141 | 4 | 9 | 263 | 129 | 372 | 1.79e-51 | 172 |
| MsG0880046768.01.T01 | AT5G14130 | 41.379 | 261 | 140 | 6 | 9 | 263 | 118 | 371 | 2.14e-51 | 172 |
| MsG0880046768.01.T01 | AT3G49120 | 37.643 | 263 | 150 | 6 | 10 | 263 | 78 | 335 | 1.09e-50 | 170 |
| MsG0880046768.01.T01 | AT4G37520 | 38.113 | 265 | 142 | 7 | 10 | 263 | 73 | 326 | 1.10e-50 | 169 |
| MsG0880046768.01.T01 | AT4G26010 | 38.224 | 259 | 140 | 6 | 9 | 263 | 67 | 309 | 3.80e-50 | 167 |
| MsG0880046768.01.T01 | AT4G26010 | 38.224 | 259 | 140 | 6 | 9 | 263 | 95 | 337 | 4.94e-50 | 167 |
| MsG0880046768.01.T01 | AT5G58390 | 38.258 | 264 | 141 | 7 | 9 | 263 | 66 | 316 | 6.39e-50 | 167 |
| MsG0880046768.01.T01 | AT2G39040 | 40.149 | 269 | 138 | 7 | 9 | 263 | 91 | 350 | 1.87e-48 | 164 |
| MsG0880046768.01.T01 | AT5G39580 | 58.462 | 130 | 54 | 0 | 9 | 138 | 70 | 199 | 2.26e-48 | 160 |
| MsG0880046768.01.T01 | AT5G58400 | 40.076 | 262 | 137 | 7 | 10 | 263 | 76 | 325 | 1.71e-47 | 160 |
| MsG0880046768.01.T01 | AT3G49960 | 36.502 | 263 | 154 | 5 | 9 | 263 | 72 | 329 | 3.11e-47 | 160 |
| MsG0880046768.01.T01 | AT4G37530 | 41.148 | 209 | 115 | 4 | 10 | 210 | 73 | 281 | 3.15e-47 | 159 |
| MsG0880046768.01.T01 | AT4G17690 | 39.924 | 263 | 139 | 7 | 9 | 263 | 71 | 322 | 4.34e-47 | 159 |
| MsG0880046768.01.T01 | AT3G28200 | 39.773 | 264 | 137 | 8 | 9 | 263 | 66 | 316 | 1.08e-45 | 155 |
| MsG0880046768.01.T01 | AT2G22420 | 37.358 | 265 | 141 | 9 | 10 | 263 | 69 | 319 | 1.83e-45 | 155 |
| MsG0880046768.01.T01 | AT5G47000 | 39.924 | 263 | 140 | 7 | 9 | 263 | 78 | 330 | 3.95e-45 | 155 |
| MsG0880046768.01.T01 | AT2G34060 | 39.773 | 264 | 144 | 7 | 9 | 262 | 87 | 345 | 8.90e-45 | 154 |
| MsG0880046768.01.T01 | AT5G40150 | 39.080 | 261 | 142 | 6 | 10 | 263 | 78 | 328 | 1.89e-44 | 153 |
| MsG0880046768.01.T01 | AT1G34510 | 35.135 | 259 | 148 | 6 | 9 | 263 | 67 | 309 | 9.23e-42 | 145 |
| MsG0880046768.01.T01 | AT1G24110 | 35.249 | 261 | 156 | 7 | 10 | 263 | 68 | 322 | 2.59e-41 | 144 |
| MsG0880046768.01.T01 | AT4G21960 | 33.969 | 262 | 156 | 5 | 9 | 263 | 76 | 327 | 5.02e-41 | 144 |
| MsG0880046768.01.T01 | AT2G35380 | 35.273 | 275 | 142 | 7 | 10 | 263 | 76 | 335 | 1.54e-40 | 143 |
| MsG0880046768.01.T01 | AT2G35380 | 35.385 | 260 | 135 | 6 | 22 | 263 | 3 | 247 | 4.37e-39 | 137 |
| MsG0880046768.01.T01 | AT4G25980 | 51.261 | 119 | 57 | 1 | 9 | 126 | 116 | 234 | 3.06e-37 | 133 |
| MsG0880046768.01.T01 | AT3G17070 | 33.206 | 262 | 163 | 4 | 9 | 263 | 83 | 339 | 4.67e-34 | 126 |
| MsG0880046768.01.T01 | AT3G17070 | 32.950 | 261 | 163 | 4 | 10 | 263 | 21 | 276 | 1.32e-33 | 123 |
| MsG0880046768.01.T01 | AT2G24800 | 44.595 | 148 | 79 | 2 | 9 | 153 | 76 | 223 | 2.44e-30 | 114 |
| MsG0880046768.01.T01 | AT2G37130 | 30.418 | 263 | 165 | 6 | 9 | 263 | 44 | 296 | 3.79e-30 | 114 |
| MsG0880046768.01.T01 | AT2G37130 | 30.418 | 263 | 165 | 6 | 9 | 263 | 75 | 327 | 7.64e-30 | 114 |
Find 72 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAACTCACATCAAATT+TGG | 0.165498 | 8:+77835907 | None:intergenic |
| CATGACCTTGTTACCTTAGT+TGG | 0.310649 | 8:-77836259 | MsG0880046768.01.T01:intron |
| GATGGATCCATATTGATTAC+AGG | 0.338880 | 8:-77836702 | MsG0880046768.01.T01:CDS |
| AGAAGGGTGGTGGAAAATTA+TGG | 0.355712 | 8:-77835818 | MsG0880046768.01.T01:CDS |
| AAAATGTACGCGATGGTAAC+GGG | 0.363658 | 8:-77835883 | MsG0880046768.01.T01:CDS |
| TGAAGAACCTGTAATCAATA+TGG | 0.368848 | 8:+77836695 | None:intergenic |
| TCTCTTCTTCCTGTGGGTAC+TGG | 0.375901 | 8:+77836382 | None:intergenic |
| TTGGACATATTGCTTTAAGC+TGG | 0.375950 | 8:+77835978 | None:intergenic |
| ATTTCATTATGATATTGTTT+AGG | 0.378815 | 8:+77835605 | None:intergenic |
| TGGTTTGAGAAGGGTGGCTT+TGG | 0.385896 | 8:-77835945 | MsG0880046768.01.T01:CDS |
| CTCAACTTAATCATAGCCTT+TGG | 0.393832 | 8:+77835749 | None:intergenic |
| AAGAAAGCTTGGTTTATAGT+AGG | 0.408204 | 8:+77836004 | None:intergenic |
| TAAAGAACCTGCAATCTGTT+TGG | 0.423931 | 8:+77836068 | None:intergenic |
| CCATAGGCCAAACAGATTGC+AGG | 0.434490 | 8:-77836075 | MsG0880046768.01.T01:CDS |
| CCTGTGGGTACTGGCCAACT+TGG | 0.440566 | 8:+77836391 | None:intergenic |
| CCTGCAATCTGTTTGGCCTA+TGG | 0.440592 | 8:+77836075 | None:intergenic |
| TGATACAACTCCAGGGCATA+TGG | 0.444136 | 8:+77836596 | None:intergenic |
| AGCTCGTGATGCTGTCGATT+TGG | 0.444423 | 8:-77836550 | MsG0880046768.01.T01:intron |
| GTCATGATCATGTAGACCTT+TGG | 0.452962 | 8:+77836276 | None:intergenic |
| TTGCCAAACCTTGGTCTAAG+AGG | 0.452986 | 8:-77836657 | MsG0880046768.01.T01:CDS |
| AAACCTCTTAGACCAAGGTT+TGG | 0.456920 | 8:+77836654 | None:intergenic |
| CCACTCCGACAGGGCTGCGA+TGG | 0.460974 | 8:-77836720 | MsG0880046768.01.T01:CDS |
| AAACTCACATCAAATTTGGC+TGG | 0.463362 | 8:+77835911 | None:intergenic |
| CAGAATCTTCCCACAGCCTC+TGG | 0.471179 | 8:+77835846 | None:intergenic |
| TTAATTGATAAATCAAGAAA+AGG | 0.472347 | 8:-77835670 | MsG0880046768.01.T01:exon |
| GAAAGAAAGCATACCAACTA+AGG | 0.472579 | 8:+77836246 | None:intergenic |
| TAATGCAAAATCACAAATAG+AGG | 0.476452 | 8:-77836619 | MsG0880046768.01.T01:CDS |
| TAAGCTGGGCTAAGAAAGCT+TGG | 0.487188 | 8:+77835993 | None:intergenic |
| TAGAGTCAGACCAGAGGCTG+TGG | 0.488491 | 8:-77835856 | MsG0880046768.01.T01:CDS |
| CCTTCCATCTCTTCTTCCTG+TGG | 0.491273 | 8:+77836375 | None:intergenic |
| AATATCTCTCCCACTCCGAC+AGG | 0.494207 | 8:-77836730 | MsG0880046768.01.T01:CDS |
| CAAATAGAGGCCATATGCCC+TGG | 0.497217 | 8:-77836606 | MsG0880046768.01.T01:CDS |
| TGGACATATTGCTTTAAGCT+GGG | 0.499771 | 8:+77835979 | None:intergenic |
| CTTCCATCTCTTCTTCCTGT+GGG | 0.503668 | 8:+77836376 | None:intergenic |
| TCAGCACATGATACAACTCC+AGG | 0.504753 | 8:+77836588 | None:intergenic |
| CATCACGAGCTGCCAATGCT+AGG | 0.522152 | 8:+77836562 | None:intergenic |
| TTCTGCTACAAGAAGGGTGG+TGG | 0.523049 | 8:-77835828 | MsG0880046768.01.T01:CDS |
| CTATACAATTTCACAACCAC+TGG | 0.523097 | 8:-77836037 | MsG0880046768.01.T01:CDS |
| CTTCAAAACCTCTTAGACCA+AGG | 0.526023 | 8:+77836649 | None:intergenic |
| CGAAATGCATTGCCAAACCT+TGG | 0.531697 | 8:-77836666 | MsG0880046768.01.T01:CDS |
| CATCGCAGCCCTGTCGGAGT+GGG | 0.534332 | 8:+77836721 | None:intergenic |
| TGGAGATGGTTTGAGAAGGG+TGG | 0.539454 | 8:-77835951 | MsG0880046768.01.T01:CDS |
| GTACCCACAGGAAGAAGAGA+TGG | 0.545599 | 8:-77836379 | MsG0880046768.01.T01:CDS |
| AAGTGGAGAAGGCAAGTTTG+AGG | 0.547389 | 8:+77836333 | None:intergenic |
| AAATGGAGATGGTTTGAGAA+GGG | 0.551257 | 8:-77835954 | MsG0880046768.01.T01:CDS |
| CCATCGCAGCCCTGTCGGAG+TGG | 0.553082 | 8:+77836720 | None:intergenic |
| GGGAAGATTCTGCTACAAGA+AGG | 0.565073 | 8:-77835835 | MsG0880046768.01.T01:CDS |
| TAGAATGTTTCATAACCAGT+TGG | 0.567914 | 8:-77835535 | MsG0880046768.01.T01:three_prime_UTR |
| GAAACAGGTTCAAGTGGAGA+AGG | 0.576067 | 8:+77836322 | None:intergenic |
| TGTGAAGGTGCACATACCAT+AGG | 0.589553 | 8:-77836091 | MsG0880046768.01.T01:intron |
| ATGTGCTGACATCCTAGCAT+TGG | 0.595121 | 8:-77836574 | MsG0880046768.01.T01:CDS |
| GGAAGATTCTGCTACAAGAA+GGG | 0.607167 | 8:-77835834 | MsG0880046768.01.T01:CDS |
| AAAATGGAGATGGTTTGAGA+AGG | 0.611494 | 8:-77835955 | MsG0880046768.01.T01:CDS |
| AGGGTGGTGGAAAATTATGG+TGG | 0.612830 | 8:-77835815 | MsG0880046768.01.T01:CDS |
| TGGACAGAAACAGGTTCAAG+TGG | 0.615352 | 8:+77836316 | None:intergenic |
| CCAAGTTGGCCAGTACCCAC+AGG | 0.616958 | 8:-77836391 | MsG0880046768.01.T01:CDS |
| TGGATCCATCGCAGCCCTGT+CGG | 0.624803 | 8:+77836715 | None:intergenic |
| AGAGTCAGACCAGAGGCTGT+GGG | 0.625853 | 8:-77835855 | MsG0880046768.01.T01:CDS |
| GACAGAGTGATGGACCAAGT+TGG | 0.627187 | 8:-77836405 | MsG0880046768.01.T01:intron |
| GATGTGAAGACTGGTACTGA+TGG | 0.633299 | 8:-77835719 | MsG0880046768.01.T01:CDS |
| AGTAGTGTAGATGTGAAGAC+TGG | 0.633583 | 8:-77835728 | MsG0880046768.01.T01:CDS |
| ATGTGAAGACTGGTACTGAT+GGG | 0.639456 | 8:-77835718 | MsG0880046768.01.T01:CDS |
| GCATACCAACTAAGGTAACA+AGG | 0.639818 | 8:+77836254 | None:intergenic |
| GGGTGGTGGAAAATTATGGT+GGG | 0.640609 | 8:-77835814 | MsG0880046768.01.T01:CDS |
| ATATCTCTCCCACTCCGACA+GGG | 0.656260 | 8:-77836729 | MsG0880046768.01.T01:CDS |
| CCACAGGAAGAAGAGATGGA+AGG | 0.657156 | 8:-77836375 | MsG0880046768.01.T01:CDS |
| AGTAGGATCAGCATTGCCAG+TGG | 0.663872 | 8:+77836021 | None:intergenic |
| ACATGAATATGACAGAGTGA+TGG | 0.664356 | 8:-77836415 | MsG0880046768.01.T01:intron |
| AGATTCTGCTACAAGAAGGG+TGG | 0.680985 | 8:-77835831 | MsG0880046768.01.T01:CDS |
| CAGCACATGATACAACTCCA+GGG | 0.695239 | 8:+77836589 | None:intergenic |
| TGTGAAGACTGGTACTGATG+GGG | 0.729064 | 8:-77835717 | MsG0880046768.01.T01:CDS |
| GGATTCTAGAGTCAGACCAG+AGG | 0.752589 | 8:-77835862 | MsG0880046768.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTTTTAAACGAAAT+TGG | - | Chr8:77836033-77836052 | MsG0880046768.01.T01:CDS | 10.0% |
| !! | ATTTCATTATGATATTGTTT+AGG | + | Chr8:77836649-77836668 | None:intergenic | 15.0% |
| !! | TTAATTGATAAATCAAGAAA+AGG | - | Chr8:77836581-77836600 | MsG0880046768.01.T01:CDS | 15.0% |
| !! | ATAAATGTATAGCAAATACT+AGG | + | Chr8:77836112-77836131 | None:intergenic | 20.0% |
| !!! | ATTTGATTTTGAATTTCCAA+AGG | - | Chr8:77836486-77836505 | MsG0880046768.01.T01:intron | 20.0% |
| ! | AAAGCAATATGTCCAAAAAA+TGG | - | Chr8:77836280-77836299 | MsG0880046768.01.T01:CDS | 25.0% |
| ! | TAATGCAAAATCACAAATAG+AGG | - | Chr8:77835632-77835651 | MsG0880046768.01.T01:three_prime_UTR | 25.0% |
| !!! | CATAAGTGTTGATTTTATCA+TGG | + | Chr8:77835808-77835827 | None:intergenic | 25.0% |
| AAGAAAGCTTGGTTTATAGT+AGG | + | Chr8:77836250-77836269 | None:intergenic | 30.0% | |
| ATATGTCCAAAAAATGGAGA+TGG | - | Chr8:77836286-77836305 | MsG0880046768.01.T01:CDS | 30.0% | |
| GAAGAAACTCACATCAAATT+TGG | + | Chr8:77836347-77836366 | None:intergenic | 30.0% | |
| TAACACATATCAGTCTTAGT+TGG | + | Chr8:77836698-77836717 | None:intergenic | 30.0% | |
| TAGAATGTTTCATAACCAGT+TGG | - | Chr8:77836716-77836735 | MsG0880046768.01.T01:CDS | 30.0% | |
| TGAAGAACCTGTAATCAATA+TGG | + | Chr8:77835559-77835578 | None:intergenic | 30.0% | |
| TTCACACAAATCAAGAGTTT+AGG | + | Chr8:77836146-77836165 | None:intergenic | 30.0% | |
| !! | AATTATGGTGGGAATTTTAG+AGG | - | Chr8:77836448-77836467 | MsG0880046768.01.T01:intron | 30.0% |
| !! | ATTATGGTGGGAATTTTAGA+GGG | - | Chr8:77836449-77836468 | MsG0880046768.01.T01:intron | 30.0% |
| !! | TAAACTCTTGATTTGTGTGA+AGG | - | Chr8:77836145-77836164 | MsG0880046768.01.T01:intron | 30.0% |
| AAAAATGTACGCGATGGTAA+CGG | - | Chr8:77836367-77836386 | MsG0880046768.01.T01:CDS | 35.0% | |
| AAAATGGAGATGGTTTGAGA+AGG | - | Chr8:77836296-77836315 | MsG0880046768.01.T01:CDS | 35.0% | |
| AAACTCACATCAAATTTGGC+TGG | + | Chr8:77836343-77836362 | None:intergenic | 35.0% | |
| AAATGGAGATGGTTTGAGAA+GGG | - | Chr8:77836297-77836316 | MsG0880046768.01.T01:CDS | 35.0% | |
| ACATGAATATGACAGAGTGA+TGG | - | Chr8:77835836-77835855 | MsG0880046768.01.T01:CDS | 35.0% | |
| CTATACAATTTCACAACCAC+TGG | - | Chr8:77836214-77836233 | MsG0880046768.01.T01:intron | 35.0% | |
| CTCAACTTAATCATAGCCTT+TGG | + | Chr8:77836505-77836524 | None:intergenic | 35.0% | |
| TAAAGAACCTGCAATCTGTT+TGG | + | Chr8:77836186-77836205 | None:intergenic | 35.0% | |
| TTCTTCAAAAATGTACGCGA+TGG | - | Chr8:77836361-77836380 | MsG0880046768.01.T01:CDS | 35.0% | |
| ! | GAAAGAAAGCATACCAACTA+AGG | + | Chr8:77836008-77836027 | None:intergenic | 35.0% |
| ! | GATGGATCCATATTGATTAC+AGG | - | Chr8:77835549-77835568 | MsG0880046768.01.T01:intron | 35.0% |
| ! | TGGACATATTGCTTTAAGCT+GGG | + | Chr8:77836275-77836294 | None:intergenic | 35.0% |
| ! | TTGGACATATTGCTTTAAGC+TGG | + | Chr8:77836276-77836295 | None:intergenic | 35.0% |
| !! | GGAATTTTAGAGGGTTATTG+GGG | - | Chr8:77836458-77836477 | MsG0880046768.01.T01:intron | 35.0% |
| !! | GGGAATTTTAGAGGGTTATT+GGG | - | Chr8:77836457-77836476 | MsG0880046768.01.T01:intron | 35.0% |
| !! | TGGGAATTTTAGAGGGTTAT+TGG | - | Chr8:77836456-77836475 | MsG0880046768.01.T01:intron | 35.0% |
| !!! | CTCAAACCATCTCCATTTTT+TGG | + | Chr8:77836295-77836314 | None:intergenic | 35.0% |
| AAAATGTACGCGATGGTAAC+GGG | - | Chr8:77836368-77836387 | MsG0880046768.01.T01:CDS | 40.0% | |
| AAACCTCTTAGACCAAGGTT+TGG | + | Chr8:77835600-77835619 | None:intergenic | 40.0% | |
| AGTAGTGTAGATGTGAAGAC+TGG | - | Chr8:77836523-77836542 | MsG0880046768.01.T01:intron | 40.0% | |
| ATTGTGTGTGTGCACTTATG+CGG | + | Chr8:77835765-77835784 | None:intergenic | 40.0% | |
| CATGACCTTGTTACCTTAGT+TGG | - | Chr8:77835992-77836011 | MsG0880046768.01.T01:CDS | 40.0% | |
| CTTCAAAACCTCTTAGACCA+AGG | + | Chr8:77835605-77835624 | None:intergenic | 40.0% | |
| GCATACCAACTAAGGTAACA+AGG | + | Chr8:77836000-77836019 | None:intergenic | 40.0% | |
| GGAAGATTCTGCTACAAGAA+GGG | - | Chr8:77836417-77836436 | MsG0880046768.01.T01:intron | 40.0% | |
| GTCATGATCATGTAGACCTT+TGG | + | Chr8:77835978-77835997 | None:intergenic | 40.0% | |
| TCCAAAAAACAAGGACCAAC+TGG | + | Chr8:77836734-77836753 | None:intergenic | 40.0% | |
| ! | TGGCAGCAAATTTTTGTCGA+TGG | + | Chr8:77835958-77835977 | None:intergenic | 40.0% |
| ! | TTTTGTCGATGGACAGAAAC+AGG | + | Chr8:77835947-77835966 | None:intergenic | 40.0% |
| !! | AGAAGGGTGGTGGAAAATTA+TGG | - | Chr8:77836433-77836452 | MsG0880046768.01.T01:intron | 40.0% |
| !! | ATGTGAAGACTGGTACTGAT+GGG | - | Chr8:77836533-77836552 | MsG0880046768.01.T01:intron | 40.0% |
| !! | CGACAAAAATTTGCTGCCAA+AGG | - | Chr8:77835959-77835978 | MsG0880046768.01.T01:CDS | 40.0% |
| !!! | ACCAGTTGGTCCTTGTTTTT+TGG | - | Chr8:77836730-77836749 | MsG0880046768.01.T01:CDS | 40.0% |
| AAGTGGAGAAGGCAAGTTTG+AGG | + | Chr8:77835921-77835940 | None:intergenic | 45.0% | |
| AGATTCTGCTACAAGAAGGG+TGG | - | Chr8:77836420-77836439 | MsG0880046768.01.T01:intron | 45.0% | |
| CAGCACATGATACAACTCCA+GGG | + | Chr8:77835665-77835684 | None:intergenic | 45.0% | |
| CGAAATGCATTGCCAAACCT+TGG | - | Chr8:77835585-77835604 | MsG0880046768.01.T01:intron | 45.0% | |
| CTTCCATCTCTTCTTCCTGT+GGG | + | Chr8:77835878-77835897 | None:intergenic | 45.0% | |
| GAAACAGGTTCAAGTGGAGA+AGG | + | Chr8:77835932-77835951 | None:intergenic | 45.0% | |
| GGGAAGATTCTGCTACAAGA+AGG | - | Chr8:77836416-77836435 | MsG0880046768.01.T01:intron | 45.0% | |
| TAAGCTGGGCTAAGAAAGCT+TGG | + | Chr8:77836261-77836280 | None:intergenic | 45.0% | |
| TCAGCACATGATACAACTCC+AGG | + | Chr8:77835666-77835685 | None:intergenic | 45.0% | |
| TGATACAACTCCAGGGCATA+TGG | + | Chr8:77835658-77835677 | None:intergenic | 45.0% | |
| TGGACAGAAACAGGTTCAAG+TGG | + | Chr8:77835938-77835957 | None:intergenic | 45.0% | |
| TTGCCAAACCTTGGTCTAAG+AGG | - | Chr8:77835594-77835613 | MsG0880046768.01.T01:intron | 45.0% | |
| ! | ATGTGCTGACATCCTAGCAT+TGG | - | Chr8:77835677-77835696 | MsG0880046768.01.T01:exon | 45.0% |
| ! | GATGTGAAGACTGGTACTGA+TGG | - | Chr8:77836532-77836551 | MsG0880046768.01.T01:intron | 45.0% |
| ! | TGTGAAGGTGCACATACCAT+AGG | - | Chr8:77836160-77836179 | MsG0880046768.01.T01:intron | 45.0% |
| !! | AGGGTGGTGGAAAATTATGG+TGG | - | Chr8:77836436-77836455 | MsG0880046768.01.T01:intron | 45.0% |
| !! | GGGTGGTGGAAAATTATGGT+GGG | - | Chr8:77836437-77836456 | MsG0880046768.01.T01:intron | 45.0% |
| !! | TGTGAAGACTGGTACTGATG+GGG | - | Chr8:77836534-77836553 | MsG0880046768.01.T01:intron | 45.0% |
| AATATCTCTCCCACTCCGAC+AGG | - | Chr8:77835521-77835540 | MsG0880046768.01.T01:three_prime_UTR | 50.0% | |
| AGTAGGATCAGCATTGCCAG+TGG | + | Chr8:77836233-77836252 | None:intergenic | 50.0% | |
| ATATCTCTCCCACTCCGACA+GGG | - | Chr8:77835522-77835541 | MsG0880046768.01.T01:three_prime_UTR | 50.0% | |
| CAAATAGAGGCCATATGCCC+TGG | - | Chr8:77835645-77835664 | MsG0880046768.01.T01:three_prime_UTR | 50.0% | |
| CCACAGGAAGAAGAGATGGA+AGG | - | Chr8:77835876-77835895 | MsG0880046768.01.T01:CDS | 50.0% | |
| CCATAGGCCAAACAGATTGC+AGG | - | Chr8:77836176-77836195 | MsG0880046768.01.T01:intron | 50.0% | |
| CCTGCAATCTGTTTGGCCTA+TGG | + | Chr8:77836179-77836198 | None:intergenic | 50.0% | |
| CCTTCCATCTCTTCTTCCTG+TGG | + | Chr8:77835879-77835898 | None:intergenic | 50.0% | |
| GTACCCACAGGAAGAAGAGA+TGG | - | Chr8:77835872-77835891 | MsG0880046768.01.T01:CDS | 50.0% | |
| TCTCTTCTTCCTGTGGGTAC+TGG | + | Chr8:77835872-77835891 | None:intergenic | 50.0% | |
| TGGAGATGGTTTGAGAAGGG+TGG | - | Chr8:77836300-77836319 | MsG0880046768.01.T01:CDS | 50.0% | |
| TGGTTTGAGAAGGGTGGCTT+TGG | - | Chr8:77836306-77836325 | MsG0880046768.01.T01:CDS | 50.0% | |
| TTCTGCTACAAGAAGGGTGG+TGG | - | Chr8:77836423-77836442 | MsG0880046768.01.T01:intron | 50.0% | |
| ! | AGCTCGTGATGCTGTCGATT+TGG | - | Chr8:77835701-77835720 | MsG0880046768.01.T01:CDS | 50.0% |
| !! | GACAGAGTGATGGACCAAGT+TGG | - | Chr8:77835846-77835865 | MsG0880046768.01.T01:CDS | 50.0% |
| !! | GGATTCTAGAGTCAGACCAG+AGG | - | Chr8:77836389-77836408 | MsG0880046768.01.T01:CDS | 50.0% |
| AGAGTCAGACCAGAGGCTGT+GGG | - | Chr8:77836396-77836415 | MsG0880046768.01.T01:CDS | 55.0% | |
| CAGAATCTTCCCACAGCCTC+TGG | + | Chr8:77836408-77836427 | None:intergenic | 55.0% | |
| CATCACGAGCTGCCAATGCT+AGG | + | Chr8:77835692-77835711 | None:intergenic | 55.0% | |
| TAGAGTCAGACCAGAGGCTG+TGG | - | Chr8:77836395-77836414 | MsG0880046768.01.T01:CDS | 55.0% | |
| TGGATCCATCGCAGCCCTGT+CGG | + | Chr8:77835539-77835558 | None:intergenic | 60.0% | |
| ! | CCAAGTTGGCCAGTACCCAC+AGG | - | Chr8:77835860-77835879 | MsG0880046768.01.T01:CDS | 60.0% |
| !! | CCTGTGGGTACTGGCCAACT+TGG | + | Chr8:77835863-77835882 | None:intergenic | 60.0% |
| CATCGCAGCCCTGTCGGAGT+GGG | + | Chr8:77835533-77835552 | None:intergenic | 65.0% | |
| CCACTCCGACAGGGCTGCGA+TGG | - | Chr8:77835531-77835550 | MsG0880046768.01.T01:three_prime_UTR | 70.0% | |
| CCATCGCAGCCCTGTCGGAG+TGG | + | Chr8:77835534-77835553 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 77835516 | 77836757 | 77835516 | ID=MsG0880046768.01;Name=MsG0880046768.01 |
| Chr8 | mRNA | 77835516 | 77836757 | 77835516 | ID=MsG0880046768.01.T01;Parent=MsG0880046768.01;Name=MsG0880046768.01.T01;_AED=0.36;_eAED=0.37;_QI=0|1|0.75|1|0.66|0.5|4|128|263 |
| Chr8 | exon | 77835516 | 77835554 | 77835516 | ID=MsG0880046768.01.T01:exon:33290;Parent=MsG0880046768.01.T01 |
| Chr8 | exon | 77835596 | 77836106 | 77835596 | ID=MsG0880046768.01.T01:exon:33289;Parent=MsG0880046768.01.T01 |
| Chr8 | exon | 77836260 | 77836422 | 77836260 | ID=MsG0880046768.01.T01:exon:33288;Parent=MsG0880046768.01.T01 |
| Chr8 | exon | 77836551 | 77836757 | 77836551 | ID=MsG0880046768.01.T01:exon:33287;Parent=MsG0880046768.01.T01 |
| Chr8 | CDS | 77836551 | 77836757 | 77836551 | ID=MsG0880046768.01.T01:cds;Parent=MsG0880046768.01.T01 |
| Chr8 | CDS | 77836260 | 77836422 | 77836260 | ID=MsG0880046768.01.T01:cds;Parent=MsG0880046768.01.T01 |
| Chr8 | CDS | 77835685 | 77836106 | 77835685 | ID=MsG0880046768.01.T01:cds;Parent=MsG0880046768.01.T01 |
| Chr8 | three_prime_UTR | 77835596 | 77835684 | 77835596 | ID=MsG0880046768.01.T01:three_prime_utr;Parent=MsG0880046768.01.T01 |
| Chr8 | three_prime_UTR | 77835516 | 77835554 | 77835516 | ID=MsG0880046768.01.T01:three_prime_utr;Parent=MsG0880046768.01.T01 |
| Gene Sequence |
| Protein sequence |
