AlfalfaGEDB | MsG0180003237.01

M. sativa cultivar ZhongmuNo.1 / MsG0180003237.01

KEGG: -
GO: -
PFAM: PF03018

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003237.01.T01	XP_003590314.1	92.398	171	13	0	1	171	16	186	6.28E-114	331

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003237.01.T01	Q9SS03	48.701	154	77	2	18	170	37	189	3.65E-48	157

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003237.01.T01	G7I8H9	92.398	171	13	0	1	171	16	186	3.00e-114	331

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000399.01	MsG0180003237.01	0.807698	4.452276e-50	2.496587e-47
MsG0180001029.01	MsG0180003237.01	0.809911	1.497601e-50	8.903528e-48
MsG0180001084.01	MsG0180003237.01	0.848077	7.712117e-60	1.398650e-56
MsG0180001513.01	MsG0180003237.01	0.817522	3.157378e-52	2.304662e-49
MsG0180001515.01	MsG0180003237.01	0.803586	3.248466e-49	1.638722e-46
MsG0180001533.01	MsG0180003237.01	0.810455	1.142861e-50	6.891944e-48
MsG0180001797.01	MsG0180003237.01	0.803707	3.065130e-49	1.550945e-46
MsG0180001800.01	MsG0180003237.01	0.836189	1.082793e-56	1.354561e-53
MsG0180003237.01	MsG0180003452.01	0.802238	6.168209e-49	3.006144e-46
MsG0180003237.01	MsG0180004059.01	0.816439	5.528272e-52	3.917098e-49
MsG0180003237.01	MsG0180004424.01	0.826910	2.092914e-54	1.989683e-51
MsG0180003237.01	MsG0180004962.01	0.803861	2.848445e-49	1.447084e-46
MsG0180003237.01	MsG0180005127.01	0.808916	2.448568e-50	1.417636e-47
MsG0180003237.01	MsG0180005130.01	0.817571	3.078374e-52	2.249949e-49
MsG0180003237.01	MsG0180005143.01	0.816945	4.257174e-52	3.058954e-49
MsG0180003237.01	MsG0180005146.01	0.807167	5.770039e-50	3.191209e-47
MsG0180003237.01	MsG0180005879.01	-0.803412	3.529374e-49	1.772402e-46
MsG0180003237.01	MsG0180006195.01	0.826873	2.136332e-54	2.028579e-51
MsG0180003237.01	MsG0280006442.01	0.810675	1.024598e-50	6.215453e-48
MsG0180003237.01	MsG0280007201.01	0.811132	8.158084e-51	5.009325e-48
MsG0180003237.01	MsG0280007602.01	0.815446	9.206035e-52	6.348634e-49
MsG0180003237.01	MsG0280007677.01	0.834916	2.273099e-56	2.736486e-53
MsG0180003237.01	MsG0280007869.01	0.833297	5.781278e-56	6.630069e-53
MsG0180003237.01	MsG0280007906.01	0.826869	2.140244e-54	2.032065e-51
MsG0180003237.01	MsG0280007908.01	0.841647	4.186936e-58	6.191973e-55
MsG0180003237.01	MsG0280007911.01	0.820314	7.321626e-53	5.773351e-50
MsG0180003237.01	MsG0280008178.01	0.839467	1.557732e-57	2.153095e-54
MsG0180003237.01	MsG0280008180.01	0.818257	2.154080e-52	1.604289e-49
MsG0180003237.01	MsG0280009253.01	0.822163	2.744351e-53	2.278933e-50
MsG0180003237.01	MsG0280009445.01	-0.809486	1.847664e-50	1.086180e-47
MsG0180003237.01	MsG0280010802.01	0.812658	3.795618e-51	2.427311e-48
MsG0180003237.01	MsG0280010936.01	0.801482	8.818809e-49	4.216293e-46
MsG0180003237.01	MsG0280011292.01	0.831771	1.381722e-55	1.514549e-52
MsG0180003237.01	MsG0380011635.01	0.813167	2.934956e-51	1.902469e-48
MsG0180003237.01	MsG0380013213.01	0.803763	2.985265e-49	1.512742e-46
MsG0180003237.01	MsG0380014344.01	0.821998	2.996785e-53	2.476966e-50
MsG0180003237.01	MsG0380015659.01	0.815236	1.025042e-51	7.027689e-49
MsG0180003237.01	MsG0380016458.01	0.827461	1.545064e-54	1.492670e-51
MsG0180003237.01	MsG0380017694.01	0.826780	2.248456e-54	2.129237e-51
MsG0180003237.01	MsG0380018070.01	0.835118	2.021523e-56	2.448191e-53
MsG0180003237.01	MsG0480018406.01	0.808645	2.797493e-50	1.608130e-47
MsG0180003237.01	MsG0480018439.01	0.801084	1.063784e-48	5.035397e-46
MsG0180003237.01	MsG0480018440.01	0.805417	1.348645e-49	7.131131e-47
MsG0180003237.01	MsG0480018521.01	0.821621	3.662962e-53	2.995275e-50
MsG0180003237.01	MsG0480018522.01	0.852200	5.396922e-61	1.119259e-57
MsG0180003237.01	MsG0480018692.01	0.811645	6.310745e-51	3.927552e-48
MsG0180003237.01	MsG0480018693.01	0.830710	2.519071e-55	2.675437e-52
MsG0180003237.01	MsG0480018697.01	0.816202	6.245944e-52	4.397441e-49
MsG0180003237.01	MsG0480019301.01	0.829768	4.278548e-55	4.421964e-52
MsG0180003237.01	MsG0480019322.01	0.812123	4.966450e-51	3.131046e-48
MsG0180003237.01	MsG0480019346.01	0.809262	2.064210e-50	1.206305e-47
MsG0180003237.01	MsG0480019348.01	0.860101	2.611514e-63	7.057225e-60
MsG0180003237.01	MsG0480020539.01	0.814497	1.495026e-51	1.004797e-48
MsG0180003237.01	MsG0480021133.01	0.819604	1.064585e-52	8.229921e-50
MsG0180003237.01	MsG0480022311.01	0.807170	5.761377e-50	3.186693e-47
MsG0180003237.01	MsG0480022833.01	0.807208	5.654752e-50	3.130881e-47
MsG0180003237.01	MsG0480023102.01	0.823066	1.692161e-53	1.441842e-50
MsG0180003237.01	MsG0580024086.01	0.852038	6.000115e-61	1.237868e-57
MsG0180003237.01	MsG0580024202.01	0.848414	6.222218e-60	1.141069e-56
MsG0180003237.01	MsG0580024207.01	0.826736	2.303021e-54	2.178212e-51
MsG0180003237.01	MsG0580024217.01	0.829891	3.994439e-55	4.142881e-52
MsG0180003237.01	MsG0580024408.01	0.820315	7.318555e-53	5.771070e-50
MsG0180003237.01	MsG0580024464.01	0.810866	9.313406e-51	5.678764e-48
MsG0180003237.01	MsG0580024782.01	0.807817	4.200540e-50	2.362769e-47
MsG0180003237.01	MsG0580024986.01	0.840664	7.588704e-58	1.088532e-54
MsG0180003237.01	MsG0580024990.01	0.833115	6.419341e-56	7.322358e-53
MsG0180003237.01	MsG0580024994.01	0.822514	2.274019e-53	1.907618e-50
MsG0180003237.01	MsG0580025024.01	0.820939	5.262466e-53	4.222486e-50
MsG0180003237.01	MsG0580025524.01	0.803228	3.853089e-49	1.925805e-46
MsG0180003237.01	MsG0580025961.01	0.835082	2.064112e-56	2.497046e-53
MsG0180003237.01	MsG0580025965.01	0.856918	2.324862e-62	5.637936e-59
MsG0180003237.01	MsG0580026492.01	0.800987	1.113660e-48	5.258652e-46
MsG0180003237.01	MsG0580026521.01	0.818803	1.619980e-52	1.224834e-49
MsG0180003237.01	MsG0580027751.01	0.858221	9.558800e-63	2.421743e-59
MsG0180003237.01	MsG0580027752.01	0.815230	1.028452e-51	7.049984e-49
MsG0180003237.01	MsG0580027753.01	0.813631	2.321095e-51	1.523752e-48
MsG0180003237.01	MsG0580027776.01	0.821236	4.494850e-53	3.636345e-50
MsG0180003237.01	MsG0580028587.01	0.814572	1.438956e-51	9.690320e-49
MsG0180003237.01	MsG0580028899.01	0.808155	3.557834e-50	2.019291e-47
MsG0180003237.01	MsG0580029291.01	0.830285	3.199969e-55	3.356519e-52
MsG0180003237.01	MsG0580029937.01	0.818909	1.532858e-52	1.162517e-49
MsG0180003237.01	MsG0580030135.01	0.810322	1.221108e-50	7.337967e-48
MsG0180003237.01	MsG0680030379.01	0.815730	7.958544e-52	5.531584e-49
MsG0180003237.01	MsG0680030380.01	0.809781	1.596783e-50	9.461405e-48
MsG0180003237.01	MsG0680030382.01	0.818403	1.995907e-52	1.492699e-49
MsG0180003237.01	MsG0680031009.01	0.855391	6.510315e-62	1.500882e-58
MsG0180003237.01	MsG0680031200.01	0.832604	8.599959e-56	9.659801e-53
MsG0180003237.01	MsG0680032026.01	0.848757	5.001327e-60	9.274091e-57
MsG0180003237.01	MsG0680032461.01	0.857844	1.237157e-62	3.095396e-59
MsG0180003237.01	MsG0680034255.01	0.814864	1.240128e-51	8.416884e-49
MsG0180003237.01	MsG0680034316.01	0.818568	1.831296e-52	1.375675e-49
MsG0180003237.01	MsG0680034317.01	0.807037	6.146571e-50	3.388053e-47
MsG0180003237.01	MsG0680034969.01	0.806446	8.195913e-50	4.449412e-47
MsG0180003237.01	MsG0680034974.01	0.816738	4.737552e-52	3.384579e-49
MsG0180003237.01	MsG0680034980.01	0.801458	8.920689e-49	4.262259e-46
MsG0180003237.01	MsG0780035932.01	0.853933	1.721834e-61	3.781958e-58
MsG0180003237.01	MsG0780036208.01	0.825339	4.947960e-54	4.497370e-51
MsG0180003237.01	MsG0780036376.01	0.806253	8.996910e-50	4.860551e-47
MsG0180003237.01	MsG0780036649.01	0.841971	3.436860e-58	5.134889e-55
MsG0180003237.01	MsG0780036839.01	0.805171	1.518023e-49	7.976430e-47
MsG0180003237.01	MsG0780038860.01	0.801001	1.106012e-48	5.224455e-46
MsG0180003237.01	MsG0780038963.01	0.846140	2.619092e-59	4.464228e-56
MsG0180003237.01	MsG0780039677.01	0.813499	2.481139e-51	1.623061e-48
MsG0180003237.01	MsG0780040615.01	0.853092	3.002981e-61	6.413024e-58
MsG0180003237.01	MsG0780040805.01	0.812231	4.704872e-51	2.974896e-48
MsG0180003237.01	MsG0780040806.01	0.802231	6.188021e-49	3.015242e-46
MsG0180003237.01	MsG0780040977.01	0.821139	4.731496e-53	3.817603e-50
MsG0180003237.01	MsG0780040991.01	0.839000	2.058740e-57	2.805089e-54
MsG0180003237.01	MsG0780041447.01	0.830874	2.296939e-55	2.451239e-52
MsG0180003237.01	MsG0880042642.01	0.807563	4.756140e-50	2.657588e-47
MsG0180003237.01	MsG0880043345.01	0.803918	2.770877e-49	1.409822e-46
MsG0180003237.01	MsG0880043459.01	0.815125	1.085238e-51	7.417919e-49
MsG0180003237.01	MsG0880043530.01	0.808445	3.086654e-50	1.765264e-47
MsG0180003237.01	MsG0880043997.01	0.865810	4.506157e-65	1.485549e-61
MsG0180003237.01	MsG0880044026.01	0.869173	3.776567e-66	1.403818e-62
MsG0180003237.01	MsG0880046038.01	0.827366	1.628066e-54	1.568678e-51
MsG0180003237.01	MsG0880046403.01	0.803710	3.061577e-49	1.549220e-46
MsG0180003237.01	MsG0880046768.01	0.803921	2.768028e-49	1.408450e-46
MsG0180003237.01	MsG0880046870.01	0.820325	7.281531e-53	5.743221e-50
MsG0180003237.01	MsG0880047460.01	0.823073	1.685047e-53	1.436127e-50
MsG0180003237.01	MsG0880047697.01	0.813589	2.371687e-51	1.555177e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003237.01.T01	MTR_1g056370	92.398	171	13	0	1	171	16	186	7.60e-118	331
MsG0180003237.01.T01	MTR_4g078885	49.375	160	76	3	11	170	30	184	4.54e-49	157
MsG0180003237.01.T01	MTR_4g013330	48.026	152	75	2	23	171	49	199	1.62e-48	156
MsG0180003237.01.T01	MTR_3g034030	48.125	160	78	3	11	170	30	184	1.67e-47	153
MsG0180003237.01.T01	MTR_4g013320	47.368	152	74	3	23	171	51	199	1.79e-47	153
MsG0180003237.01.T01	MTR_4g013350	47.333	150	77	2	23	171	49	197	2.40e-46	150
MsG0180003237.01.T01	MTR_4g013325	45.890	146	77	2	27	171	55	199	7.23e-46	149
MsG0180003237.01.T01	MTR_4g013345	46.000	150	79	2	23	171	48	196	3.17e-45	147
MsG0180003237.01.T01	MTR_7g093820	47.682	151	76	3	23	171	45	194	6.33e-45	147
MsG0180003237.01.T01	MTR_7g093850	48.344	151	75	3	23	171	45	194	7.21e-45	146
MsG0180003237.01.T01	MTR_7g093830	48.344	151	75	3	23	171	44	193	9.19e-45	146
MsG0180003237.01.T01	MTR_7g093790	45.033	151	80	3	23	171	42	191	2.66e-44	145
MsG0180003237.01.T01	MTR_1g054525	46.667	150	76	3	23	171	46	192	3.26e-43	142
MsG0180003237.01.T01	MTR_4g013335	43.624	149	82	2	23	171	50	196	6.72e-43	141
MsG0180003237.01.T01	MTR_4g013385	44.295	149	82	1	23	171	43	190	3.42e-42	139
MsG0180003237.01.T01	MTR_0433s0040	44.295	149	82	1	23	171	43	190	3.42e-42	139
MsG0180003237.01.T01	MTR_7g070390	43.976	166	89	2	6	171	31	192	6.97e-42	139
MsG0180003237.01.T01	MTR_4g013770	45.578	147	77	3	26	170	45	190	4.32e-41	137
MsG0180003237.01.T01	MTR_4g073950	41.892	148	83	2	26	171	46	192	1.20e-40	135
MsG0180003237.01.T01	MTR_4g013310	42.763	152	83	3	21	171	49	197	2.08e-40	135
MsG0180003237.01.T01	MTR_3g105630	43.421	152	83	1	23	171	38	189	5.71e-39	131
MsG0180003237.01.T01	MTR_3g105640	41.558	154	82	2	23	171	38	188	6.32e-39	131
MsG0180003237.01.T01	MTR_7g093870	42.208	154	84	2	23	171	40	193	1.91e-37	128
MsG0180003237.01.T01	MTR_5g096120	36.250	160	96	2	17	171	31	189	6.99e-35	121
MsG0180003237.01.T01	MTR_4g013355	38.667	150	80	3	23	171	41	179	2.10e-29	106
MsG0180003237.01.T01	MTR_4g122110	37.415	147	90	2	26	171	35	180	2.43e-25	96.3
MsG0180003237.01.T01	MTR_4g122130	35.811	148	91	3	26	171	35	180	4.99e-22	87.8
MsG0180003237.01.T01	MTR_4g049550	30.612	147	100	2	23	168	30	175	7.93e-20	82.0
MsG0180003237.01.T01	MTR_4g049570	32.394	142	94	2	28	168	35	175	1.76e-18	78.6
MsG0180003237.01.T01	MTR_8g099115	34.091	132	76	4	28	150	39	168	1.25e-14	68.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003237.01.T01	AT1G65870	48.701	154	77	2	18	170	37	189	3.72e-49	157
MsG0180003237.01.T01	AT5G42500	46.746	169	81	4	8	170	20	185	3.70e-46	149
MsG0180003237.01.T01	AT3G13650	43.558	163	86	4	9	171	30	186	6.01e-46	149
MsG0180003237.01.T01	AT5G42510	48.322	149	73	3	23	170	37	182	1.81e-45	147
MsG0180003237.01.T01	AT1G22900	50.340	147	69	3	25	170	50	193	8.27e-45	146
MsG0180003237.01.T01	AT1G58170	42.515	167	85	3	15	171	20	185	6.08e-44	144
MsG0180003237.01.T01	AT1G55210	46.309	149	77	2	23	171	42	187	1.85e-43	142
MsG0180003237.01.T01	AT1G55210	46.309	149	77	2	23	171	42	187	1.85e-43	142
MsG0180003237.01.T01	AT2G21100	43.151	146	81	2	26	170	43	187	3.52e-41	137
MsG0180003237.01.T01	AT2G21100	43.151	146	81	2	26	170	43	187	3.52e-41	137
MsG0180003237.01.T01	AT5G49040	39.634	164	95	3	9	171	31	191	1.78e-40	135
MsG0180003237.01.T01	AT3G13662	43.382	136	74	2	23	158	40	172	7.53e-36	123
MsG0180003237.01.T01	AT3G58090	47.101	138	63	3	38	170	139	271	9.57e-34	120
MsG0180003237.01.T01	AT2G21110	40.397	151	84	2	26	171	37	186	2.08e-33	117
MsG0180003237.01.T01	AT5G49030	41.259	143	80	3	9	150	31	170	4.94e-32	121
MsG0180003237.01.T01	AT3G13660	39.683	126	75	1	46	171	1	125	1.06e-31	110
MsG0180003237.01.T01	AT4G38700	35.669	157	95	3	21	171	34	190	7.23e-28	103
MsG0180003237.01.T01	AT4G23690	37.903	124	70	5	27	146	42	162	1.83e-17	76.3
MsG0180003237.01.T01	AT1G64160	33.898	118	71	4	31	144	41	155	3.89e-15	69.7
MsG0180003237.01.T01	AT4G11190	33.884	121	73	5	30	146	41	158	6.42e-14	66.6
MsG0180003237.01.T01	AT4G11210	31.081	148	99	3	3	150	18	162	1.19e-13	65.9

Find 43 sgRNAs with CRISPR-Local

Find 47 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATAAGCTCTGAACTTAAATT+TGG	0.164549	1:+58821462	None:intergenic
AAATTTGGTTCTTTAGTTAA+AGG	0.202826	1:+58821477	None:intergenic
ATGCTTTGGCTAAGACTATT+TGG	0.206020	1:-58821242	MsG0180003237.01.T01:CDS
TTTCTGAGGGTAAACTTATA+TGG	0.219973	1:+58821637	None:intergenic
GAATCATCTCATGGTCCTTT+TGG	0.240305	1:-58821522	MsG0180003237.01.T01:CDS
GGTGAGGCTGCTCCCTTTGT+AGG	0.246807	1:+58821350	None:intergenic
GCTTGGGAGGAATGTTATTA+TGG	0.306263	1:-58821325	MsG0180003237.01.T01:CDS
AATTTAAGTTCAGAGCTTAT+TGG	0.325685	1:-58821459	MsG0180003237.01.T01:CDS
AGCCCAAGGAACCTATTCTT+TGG	0.331068	1:-58821433	MsG0180003237.01.T01:CDS
AATTTGGTTCTTTAGTTAAA+GGG	0.362691	1:+58821478	None:intergenic
ATTTGGTATAATTCTACATC+TGG	0.367460	1:-58821225	MsG0180003237.01.T01:CDS
TATTTCCATGACATCCTAGA+TGG	0.372994	1:-58821585	MsG0180003237.01.T01:CDS
TTCTGAGGGTAAACTTATAT+GGG	0.380771	1:+58821638	None:intergenic
ATTTGCAAGGGGTTATGCTT+TGG	0.411059	1:-58821256	MsG0180003237.01.T01:CDS
ATGCCTATTGTTGGAGGAAC+TGG	0.412156	1:-58821288	MsG0180003237.01.T01:CDS
AATTACTTCATGAGTGTTCA+AGG	0.435174	1:-58821684	None:intergenic
GGGAGCAGCCTCACCATGCT+TGG	0.438720	1:-58821342	MsG0180003237.01.T01:CDS
GCACCAGTTCCTCCAACAAT+AGG	0.444460	1:+58821285	None:intergenic
AAGCCAAAGAATAGGTTCCT+TGG	0.451718	1:+58821430	None:intergenic
AGGACCATGAGATGATTCAT+TGG	0.458423	1:+58821527	None:intergenic
CATGGAAATAAAAGTGTAAG+TGG	0.459702	1:+58821598	None:intergenic
AGCCAAAGAATAGGTTCCTT+GGG	0.475806	1:+58821431	None:intergenic
GTCAGAGAAATGCCTATTGT+TGG	0.479243	1:-58821297	MsG0180003237.01.T01:CDS
TTGTTGAGAAGCCAAAGAAT+AGG	0.495361	1:+58821422	None:intergenic
GGAGCAGCCTCACCATGCTT+GGG	0.516739	1:-58821341	MsG0180003237.01.T01:CDS
TTTACAGCTGGAACCTACAA+AGG	0.527260	1:-58821363	MsG0180003237.01.T01:CDS
TTTCACCATCTAGGATGTCA+TGG	0.529125	1:+58821580	None:intergenic
GGACCATGAGATGATTCATT+GGG	0.532395	1:+58821528	None:intergenic
TTACAGCTGGAACCTACAAA+GGG	0.548749	1:-58821362	MsG0180003237.01.T01:CDS
CTGGTGCTTTCAGATTTGCA+AGG	0.550900	1:-58821269	MsG0180003237.01.T01:CDS
AGTATGTAAGTGGCTCCAAA+AGG	0.553653	1:+58821507	None:intergenic
TGGTGCTTTCAGATTTGCAA+GGG	0.553765	1:-58821268	MsG0180003237.01.T01:CDS
CCATGAGATGATTCATTGGG+TGG	0.558415	1:+58821531	None:intergenic
AGGGTTGTCTAGTATGTAAG+TGG	0.563851	1:+58821497	None:intergenic
AGAGAAATGCCTATTGTTGG+AGG	0.564407	1:-58821294	MsG0180003237.01.T01:CDS
TATTCTTTGGCTTCTCAACA+AGG	0.573141	1:-58821420	MsG0180003237.01.T01:CDS
ATGGAAATAAAAGTGTAAGT+GGG	0.573723	1:+58821599	None:intergenic
GAGCTTATTGGAAGAGCCCA+AGG	0.578477	1:-58821447	MsG0180003237.01.T01:CDS
GCAGCCTCACCATGCTTGGG+AGG	0.595405	1:-58821338	MsG0180003237.01.T01:CDS
AATAACATTCCTCCCAAGCA+TGG	0.596205	1:+58821329	None:intergenic
CCACCCAATGAATCATCTCA+TGG	0.605763	1:-58821531	MsG0180003237.01.T01:CDS
CATTCCTCCCAAGCATGGTG+AGG	0.641930	1:+58821334	None:intergenic
GGTGCTTTCAGATTTGCAAG+GGG	0.678373	1:-58821267	MsG0180003237.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAATTTGGTTCTTTAGTTAA+AGG	+	Chr1:58821383-58821402	None:intergenic	20.0%
!!!	AATTTGGTTCTTTAGTTAAA+GGG	+	Chr1:58821382-58821401	None:intergenic	20.0%
!!!	ATTAATTTTGTTTTTACAGC+TGG	-	Chr1:58821482-58821501	MsG0180003237.01.T01:CDS	20.0%
!	ATTTGGTATAATTCTACATC+TGG	-	Chr1:58821632-58821651	MsG0180003237.01.T01:CDS	25.0%
!!	AAAACTTTGTAGATTTTCTG+AGG	+	Chr1:58821237-58821256	None:intergenic	25.0%
!!	AAACTTTGTAGATTTTCTGA+GGG	+	Chr1:58821236-58821255	None:intergenic	25.0%
!!	AATTTAAGTTCAGAGCTTAT+TGG	-	Chr1:58821398-58821417	MsG0180003237.01.T01:CDS	25.0%
!!	ATGGAAATAAAAGTGTAAGT+GGG	+	Chr1:58821261-58821280	None:intergenic	25.0%
!!!	ATAAGCTCTGAACTTAAATT+TGG	+	Chr1:58821398-58821417	None:intergenic	25.0%
!!!	TTGATAATTTTGAGTGTAGT+TGG	+	Chr1:58821305-58821324	None:intergenic	25.0%
!	CATGGAAATAAAAGTGTAAG+TGG	+	Chr1:58821262-58821281	None:intergenic	30.0%
!	TTCTGAGGGTAAACTTATAT+GGG	+	Chr1:58821222-58821241	None:intergenic	30.0%
!	TTTCTGAGGGTAAACTTATA+TGG	+	Chr1:58821223-58821242	None:intergenic	30.0%
	ATGCTTTGGCTAAGACTATT+TGG	-	Chr1:58821615-58821634	MsG0180003237.01.T01:CDS	35.0%
	TATTTCCATGACATCCTAGA+TGG	-	Chr1:58821272-58821291	MsG0180003237.01.T01:CDS	35.0%
	TTGTTGAGAAGCCAAAGAAT+AGG	+	Chr1:58821438-58821457	None:intergenic	35.0%
!	TATTCTTTGGCTTCTCAACA+AGG	-	Chr1:58821437-58821456	MsG0180003237.01.T01:CDS	35.0%
!!!	TAGTTGGTTTTTCACCATCT+AGG	+	Chr1:58821289-58821308	None:intergenic	35.0%
	AAGCCAAAGAATAGGTTCCT+TGG	+	Chr1:58821430-58821449	None:intergenic	40.0%
	AATAACATTCCTCCCAAGCA+TGG	+	Chr1:58821531-58821550	None:intergenic	40.0%
	AGAGAAATGCCTATTGTTGG+AGG	-	Chr1:58821563-58821582	MsG0180003237.01.T01:CDS	40.0%
	AGCCAAAGAATAGGTTCCTT+GGG	+	Chr1:58821429-58821448	None:intergenic	40.0%
	AGGACCATGAGATGATTCAT+TGG	+	Chr1:58821333-58821352	None:intergenic	40.0%
	AGGGTTGTCTAGTATGTAAG+TGG	+	Chr1:58821363-58821382	None:intergenic	40.0%
	AGTATGTAAGTGGCTCCAAA+AGG	+	Chr1:58821353-58821372	None:intergenic	40.0%
	ATTTGCAAGGGGTTATGCTT+TGG	-	Chr1:58821601-58821620	MsG0180003237.01.T01:CDS	40.0%
	GCTTGGGAGGAATGTTATTA+TGG	-	Chr1:58821532-58821551	MsG0180003237.01.T01:CDS	40.0%
	GGACCATGAGATGATTCATT+GGG	+	Chr1:58821332-58821351	None:intergenic	40.0%
	GTCAGAGAAATGCCTATTGT+TGG	-	Chr1:58821560-58821579	MsG0180003237.01.T01:CDS	40.0%
	TGGTGCTTTCAGATTTGCAA+GGG	-	Chr1:58821589-58821608	MsG0180003237.01.T01:CDS	40.0%
	TTACAGCTGGAACCTACAAA+GGG	-	Chr1:58821495-58821514	MsG0180003237.01.T01:CDS	40.0%
	TTTACAGCTGGAACCTACAA+AGG	-	Chr1:58821494-58821513	MsG0180003237.01.T01:CDS	40.0%
!	GAATCATCTCATGGTCCTTT+TGG	-	Chr1:58821335-58821354	MsG0180003237.01.T01:CDS	40.0%
!	TTTCACCATCTAGGATGTCA+TGG	+	Chr1:58821280-58821299	None:intergenic	40.0%
	AGCCCAAGGAACCTATTCTT+TGG	-	Chr1:58821424-58821443	MsG0180003237.01.T01:CDS	45.0%
	ATGCCTATTGTTGGAGGAAC+TGG	-	Chr1:58821569-58821588	MsG0180003237.01.T01:CDS	45.0%
	CCACCCAATGAATCATCTCA+TGG	-	Chr1:58821326-58821345	MsG0180003237.01.T01:CDS	45.0%
	CCATGAGATGATTCATTGGG+TGG	+	Chr1:58821329-58821348	None:intergenic	45.0%
	CTGGTGCTTTCAGATTTGCA+AGG	-	Chr1:58821588-58821607	MsG0180003237.01.T01:CDS	45.0%
	GGTGCTTTCAGATTTGCAAG+GGG	-	Chr1:58821590-58821609	MsG0180003237.01.T01:CDS	45.0%
	GAGCTTATTGGAAGAGCCCA+AGG	-	Chr1:58821410-58821429	MsG0180003237.01.T01:CDS	50.0%
	GCACCAGTTCCTCCAACAAT+AGG	+	Chr1:58821575-58821594	None:intergenic	50.0%
	CATTCCTCCCAAGCATGGTG+AGG	+	Chr1:58821526-58821545	None:intergenic	55.0%
	GGAGCAGCCTCACCATGCTT+GGG	-	Chr1:58821516-58821535	MsG0180003237.01.T01:CDS	60.0%
	GGTGAGGCTGCTCCCTTTGT+AGG	+	Chr1:58821510-58821529	None:intergenic	60.0%
	GCAGCCTCACCATGCTTGGG+AGG	-	Chr1:58821519-58821538	MsG0180003237.01.T01:CDS	65.0%
	GGGAGCAGCCTCACCATGCT+TGG	-	Chr1:58821515-58821534	MsG0180003237.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	58821182	58821697	58821182	ID=MsG0180003237.01;Name=MsG0180003237.01
Chr1	mRNA	58821182	58821697	58821182	ID=MsG0180003237.01.T01;Parent=MsG0180003237.01;Name=MsG0180003237.01.T01;_AED=0.40;_eAED=0.40;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|171
Chr1	exon	58821182	58821697	58821182	ID=MsG0180003237.01.T01:exon:3782;Parent=MsG0180003237.01.T01
Chr1	CDS	58821182	58821697	58821182	ID=MsG0180003237.01.T01:cds;Parent=MsG0180003237.01.T01

Gene Sequence

>MsG0180003237.01.T01

ATGAGTGTTCAAGGAAGAGTAGTGTCTTTAGAAGAATCCCATATAAGTTTACCCTCAGAAAATCTACAAAGTTTTACCCACTTACACTTTTATTTCCATGACATCCTAGATGGTGAAAAACCAACTACACTCAAAATTATCAATCCACCCAATGAATCATCTCATGGTCCTTTTGGAGCCACTTACATACTAGACAACCCTTTAACTAAAGAACCAAATTTAAGTTCAGAGCTTATTGGAAGAGCCCAAGGAACCTATTCTTTGGCTTCTCAACAAGGTGATTTTGCATTTAAGATCGATATTAATTTTGTTTTTACAGCTGGAACCTACAAAGGGAGCAGCCTCACCATGCTTGGGAGGAATGTTATTATGGATGAAGTCAGAGAAATGCCTATTGTTGGAGGAACTGGTGCTTTCAGATTTGCAAGGGGTTATGCTTTGGCTAAGACTATTTGGTATAATTCTACATCTGGAAATGCTATTGAAGAGTTTGATATTATAATTTTACATTTCTAA

Protein sequence

>MsG0180003237.01.T01

MSVQGRVVSLEESHISLPSENLQSFTHLHFYFHDILDGEKPTTLKIINPPNESSHGPFGATYILDNPLTKEPNLSSELIGRAQGTYSLASQQGDFAFKIDINFVFTAGTYKGSSLTMLGRNVIMDEVREMPIVGGTGAFRFARGYALAKTIWYNSTSGNAIEEFDIIILHF*