AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046403.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046403.01.T01 MTR_4g107440 86.726 339 13 1 1 307 708 1046 0.0 601
MsG0880046403.01.T01 MTR_8g104410 50.980 102 50 0 27 128 544 645 1.25e-26 110
MsG0880046403.01.T01 MTR_8g104410 50.980 102 50 0 27 128 780 881 1.48e-26 110
MsG0880046403.01.T01 MTR_6g083900 41.727 139 68 2 1 126 731 869 2.20e-26 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046403.01.T01 AT1G74770 39.296 341 164 7 1 307 704 1035 1.35e-57 201
MsG0880046403.01.T01 AT1G74770 39.296 341 164 7 1 307 704 1035 1.36e-57 201
MsG0880046403.01.T01 AT1G18910 34.670 349 169 9 1 307 699 1030 3.41e-54 191
MsG0880046403.01.T01 AT3G18290 42.969 128 73 0 29 156 792 919 2.90e-28 115

Find 94 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCTCTTCTGACAAATATT+TGG 0.159497 8:-72938360 None:intergenic
AACCACAACAAGGGCATTTA+TGG 0.207892 8:-72943432 None:intergenic
GAGAAGAATTCTCTAATTAT+AGG 0.251609 8:-72938077 None:intergenic
TTACATTAGGAGGATTATTC+TGG 0.280429 8:-72943577 None:intergenic
TCATATAACTCTAGTGTTAT+AGG 0.281765 8:-72943455 None:intergenic
CCAAGTGACTTGCTACATAT+TGG 0.304623 8:-72941648 None:intergenic
TAGTCAGAAGATCTCTTCTA+TGG 0.308744 8:+72939808 MsG0880046403.01.T01:intron
AATCAGTAGTAGAAACTAAA+AGG 0.319009 8:-72937932 None:intergenic
ACCGCGAGGAAATAGAAATT+TGG 0.329639 8:+72938054 MsG0880046403.01.T01:CDS
AGTGCATCTAACATCCTAAA+AGG 0.341343 8:-72943210 None:intergenic
ATGCCGAGTTGGAAAGGGTT+TGG 0.341833 8:+72941336 MsG0880046403.01.T01:CDS
TGCCGAGTTGGAAAGGGTTT+GGG 0.344960 8:+72941337 MsG0880046403.01.T01:CDS
GATCCTCATGAACAAATCTA+TGG 0.370796 8:+72939887 MsG0880046403.01.T01:CDS
TAGGATGTTAGATGCACTAT+TGG 0.387854 8:+72943215 MsG0880046403.01.T01:three_prime_UTR
TTAGAGAATTCTTCTCGAAC+CGG 0.396247 8:+72938084 MsG0880046403.01.T01:CDS
TACTACTGATTCAAAGATAA+GGG 0.407684 8:+72937944 MsG0880046403.01.T01:CDS
AACTCGGCATAAGTTGCAAT+AGG 0.411380 8:-72941323 None:intergenic
ATGCAGAGAGAAATCTTTAG+AGG 0.416654 8:+72941423 MsG0880046403.01.T01:three_prime_UTR
CAAGTGACTTGCTACATATT+GGG 0.423471 8:-72941647 None:intergenic
CAATGTTGATGACAATGTTA+AGG 0.435508 8:+72938475 MsG0880046403.01.T01:CDS
CTACTACTGATTCAAAGATA+AGG 0.446476 8:+72937943 MsG0880046403.01.T01:CDS
AGAATACAATGTTTGATGAA+TGG 0.448565 8:+72938243 MsG0880046403.01.T01:CDS
CGGGAGCAAGGGAAGATCAT+AGG 0.451871 8:+72938104 MsG0880046403.01.T01:CDS
GAATGGGTACAGTATCTCTA+AGG 0.459714 8:+72938280 MsG0880046403.01.T01:CDS
CATGCACTCAACATGTTTCA+AGG 0.467455 8:+72941519 MsG0880046403.01.T01:three_prime_UTR
AGATATGATACCTTGGCTAA+TGG 0.469441 8:+72938163 MsG0880046403.01.T01:CDS
TAAGGCGTCATCATTTAATC+AGG 0.470772 8:+72937979 MsG0880046403.01.T01:CDS
TACCATAAATGCCCTTGTTG+TGG 0.478121 8:+72943430 MsG0880046403.01.T01:three_prime_UTR
ATTGTCATCAACATTGTTGT+CGG 0.478504 8:-72938468 None:intergenic
GGTTAGGTGAATGGTGGAAT+GGG 0.478929 8:+72938264 MsG0880046403.01.T01:CDS
TTGATGAATGGTTAGGTGAA+TGG 0.479760 8:+72938255 MsG0880046403.01.T01:CDS
TTTAATGTTCTTATGGTCCA+TGG 0.480913 8:+72938214 MsG0880046403.01.T01:CDS
GCTAATGGCATCTTTAACAC+AGG 0.481517 8:+72938178 MsG0880046403.01.T01:CDS
ATCCAAATATTTGTCAGAAG+AGG 0.487452 8:+72938358 MsG0880046403.01.T01:CDS
AAGATGTATTCATGACAAAT+CGG 0.488675 8:-72941454 None:intergenic
TTGTAAGATGGATGTTTCCC+AGG 0.490252 8:-72939863 None:intergenic
CTATGATCTTCCCTTGCTCC+CGG 0.490486 8:-72938103 None:intergenic
CAATATCAAAAGCGATGGAC+AGG 0.491085 8:+72939835 MsG0880046403.01.T01:CDS
CAACTTATGCCGAGTTGGAA+AGG 0.494734 8:+72941330 MsG0880046403.01.T01:CDS
AACTTATGCCGAGTTGGAAA+GGG 0.495045 8:+72941331 MsG0880046403.01.T01:CDS
TGGTTAGGTGAATGGTGGAA+TGG 0.495588 8:+72938263 MsG0880046403.01.T01:CDS
AAGATCATAGGATGCATACT+TGG 0.504340 8:+72938116 MsG0880046403.01.T01:CDS
TTCTTCTCGAACCGGGAGCA+AGG 0.507447 8:+72938092 MsG0880046403.01.T01:CDS
CACCCAAACCCTTTCCAACT+CGG 0.508340 8:-72941339 None:intergenic
AGCGATGGACAGGAATTCCC+TGG 0.510831 8:+72939845 MsG0880046403.01.T01:CDS
TAATCAGGAAGCTGCAAGAA+AGG 0.512537 8:+72937994 MsG0880046403.01.T01:CDS
AAGGAGCAGCTCCCTTCCAC+TGG 0.518592 8:+72943404 MsG0880046403.01.T01:three_prime_UTR
CATTGTATTCTTAGTAGCCA+TGG 0.519388 8:-72938231 None:intergenic
ACTCGGCATAAGTTGCAATA+GGG 0.529060 8:-72941322 None:intergenic
TGTAATGACTGTGAAAAGAA+AGG 0.530218 8:+72943385 MsG0880046403.01.T01:three_prime_UTR
TAGAGAATTCTTCTCGAACC+GGG 0.530378 8:+72938085 MsG0880046403.01.T01:CDS
TCATGAGGATCCTTGTAAGA+TGG 0.537255 8:-72939875 None:intergenic
TATTGCAACTTATGCCGAGT+TGG 0.549331 8:+72941325 MsG0880046403.01.T01:CDS
CCAATATGTAGCAAGTCACT+TGG 0.552811 8:+72941648 MsG0880046403.01.T01:three_prime_UTR
GTGGCTCAACATTCTGTAGA+GGG 0.554576 8:-72938325 None:intergenic
ACAATGTTTGATGAATGGTT+AGG 0.559976 8:+72938248 MsG0880046403.01.T01:CDS
CAACCATAGATTTGTTCATG+AGG 0.563332 8:-72939890 None:intergenic
TTTATGGTAAAGCCAGTGGA+AGG 0.563649 8:-72943416 None:intergenic
CAAGTCACTTGGAGACATGC+AGG 0.566640 8:+72941659 MsG0880046403.01.T01:three_prime_UTR
AGTATCTCTAAGGCAGCAGA+TGG 0.571828 8:+72938290 MsG0880046403.01.T01:CDS
TGACTTGCTACATATTGGGC+AGG 0.571852 8:-72941643 None:intergenic
TATTACAAGATATGATACCT+TGG 0.572140 8:+72938156 MsG0880046403.01.T01:CDS
TCTTCTCGAACCGGGAGCAA+GGG 0.576700 8:+72938093 MsG0880046403.01.T01:CDS
TGACTTGTCATAGTGCCCAC+TGG 0.582686 8:-72938587 None:intergenic
TATTTGGATATAATTTCTAG+TGG 0.585996 8:-72938344 None:intergenic
ATGGTTGCAAACACTACAAG+AGG 0.590148 8:+72939906 MsG0880046403.01.T01:CDS
ATGAATGGTTAGGTGAATGG+TGG 0.590779 8:+72938258 MsG0880046403.01.T01:CDS
GAAGCCAATATCAAAAGCGA+TGG 0.591818 8:+72939830 MsG0880046403.01.T01:CDS
TGGGAAACATCCATCTTACA+AGG 0.596206 8:+72939865 MsG0880046403.01.T01:CDS
GCATGGCATGACCACATGGG+AGG 0.597202 8:-72941501 None:intergenic
CATGGCATGACCACATGGGA+GGG 0.598751 8:-72941500 None:intergenic
AGTGGCTCAACATTCTGTAG+AGG 0.601367 8:-72938326 None:intergenic
GGCATTTATGGTAAAGCCAG+TGG 0.602434 8:-72943420 None:intergenic
TAAGGGACAAGAGAGTGCTA+AGG 0.607113 8:+72937961 MsG0880046403.01.T01:CDS
TGCTTAAATACAGAGAAGCT+AGG 0.607983 8:-72943510 None:intergenic
GAGTGCATGGCATGACCACA+TGG 0.608684 8:-72941505 None:intergenic
GCAAACATCTATGCTCACAT+TGG 0.610162 8:-72943483 None:intergenic
CTTGAAACATGTTGAGTGCA+TGG 0.613846 8:-72941518 None:intergenic
GTTAAAGATGCCATTAGCCA+AGG 0.619614 8:-72938173 None:intergenic
TGTAAGATGGATGTTTCCCA+GGG 0.620617 8:-72939862 None:intergenic
GTGTTATAGGAACCACAACA+AGG 0.620988 8:-72943442 None:intergenic
TGCAATGAAGTAAAACCAGT+GGG 0.629425 8:+72938572 MsG0880046403.01.T01:CDS
GCGATGGACAGGAATTCCCT+GGG 0.632688 8:+72939846 MsG0880046403.01.T01:CDS
AAGGTTCATAATGCAGCACA+AGG 0.642440 8:+72938494 MsG0880046403.01.T01:CDS
GAGTCAAGATGATCTCGAGA+AGG 0.643766 8:+72938667 MsG0880046403.01.T01:CDS
GCCAAATTTCTATTTCCTCG+CGG 0.657500 8:-72938055 None:intergenic
TTATGGTAAAGCCAGTGGAA+GGG 0.665469 8:-72943415 None:intergenic
CTGCAATGAAGTAAAACCAG+TGG 0.669462 8:+72938571 MsG0880046403.01.T01:CDS
AAATACAGAGAAGCTAGGAG+AGG 0.672093 8:-72943505 None:intergenic
TGGCTCAACATTCTGTAGAG+GGG 0.680577 8:-72938324 None:intergenic
CCAGTAAAAGCCCTCCCATG+TGG 0.690306 8:+72941490 MsG0880046403.01.T01:three_prime_UTR
TGTTATAGGAACCACAACAA+GGG 0.694348 8:-72943441 None:intergenic
TTCTGATCATATAAACCGCG+AGG 0.701161 8:+72938040 MsG0880046403.01.T01:CDS
AGTGCATGGCATGACCACAT+GGG 0.787322 8:-72941504 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATATCAAACATAAA+TGG - Chr8:72942561-72942580 None:intergenic 10.0%
!! TTTATAATTTATAAAGAAAC+CGG - Chr8:72940265-72940284 None:intergenic 10.0%
!!! AATGTAATTATTTTTACATT+AGG - Chr8:72943593-72943612 None:intergenic 10.0%
!! AACTGGAAAAAAAAAAATTA+AGG - Chr8:72943003-72943022 None:intergenic 15.0%
!! ATATAAAAACAAAAACCATT+AGG - Chr8:72938786-72938805 None:intergenic 15.0%
!! TAATAAAAATATACAGAGAT+CGG - Chr8:72942610-72942629 None:intergenic 15.0%
!! TGAACAATATATCTTAATAT+AGG - Chr8:72941706-72941725 None:intergenic 15.0%
!! TTTCATGATATTAAGAAAAA+TGG + Chr8:72938548-72938567 MsG0880046403.01.T01:CDS 15.0%
!!! AAAAAACTATTTCTGATTTA+AGG + Chr8:72942745-72942764 MsG0880046403.01.T01:intron 15.0%
!!! AAAAACTATTTCTGATTTAA+GGG + Chr8:72942746-72942765 MsG0880046403.01.T01:intron 15.0%
!!! TATACAATTTTTTTAGAAGA+CGG + Chr8:72939673-72939692 MsG0880046403.01.T01:intron 15.0%
!!! TATGTTTTATTTTTGAATTG+AGG + Chr8:72940038-72940057 MsG0880046403.01.T01:intron 15.0%
!!! TTCAATTAGAGTATATATTT+TGG - Chr8:72943343-72943362 None:intergenic 15.0%
!!! TTGATTTTCTACATATATTT+AGG - Chr8:72940099-72940118 None:intergenic 15.0%
!!! TTTTAGCAAATAAATATCAA+TGG - Chr8:72939648-72939667 None:intergenic 15.0%
!! AAAATAAATGATTGAAGAAC+TGG - Chr8:72943020-72943039 None:intergenic 20.0%
!! AAACAATTCCAATCAATAAA+AGG + Chr8:72939152-72939171 MsG0880046403.01.T01:intron 20.0%
!! AACAATTCCAATCAATAAAA+GGG + Chr8:72939153-72939172 MsG0880046403.01.T01:intron 20.0%
!! AAGAAATCAATACTCTTTAA+TGG - Chr8:72940623-72940642 None:intergenic 20.0%
!! ACAACCATAAAAATAAGAAA+TGG + Chr8:72942640-72942659 MsG0880046403.01.T01:intron 20.0%
!! AGATAAATTAGAGTTTATCA+AGG + Chr8:72940391-72940410 MsG0880046403.01.T01:intron 20.0%
!! ATCTAGCCTAAATATAAATA+AGG - Chr8:72941947-72941966 None:intergenic 20.0%
!! ATTATAATGGTTCACATTAT+AGG + Chr8:72941830-72941849 MsG0880046403.01.T01:intron 20.0%
!! ATTTAAATATTTCAGTGATC+TGG - Chr8:72942800-72942819 None:intergenic 20.0%
!! CGTATAAATACCATAATTTA+GGG + Chr8:72940368-72940387 MsG0880046403.01.T01:intron 20.0%
!! GAAAAACAATACAAAATTGA+AGG - Chr8:72943321-72943340 None:intergenic 20.0%
!! TAATTTATCTCCCTAAATTA+TGG - Chr8:72940381-72940400 None:intergenic 20.0%
!! TATAGTTGTAATTTATAGCT+AGG + Chr8:72942873-72942892 MsG0880046403.01.T01:intron 20.0%
!! TCGTATAAATACCATAATTT+AGG + Chr8:72940367-72940386 MsG0880046403.01.T01:intron 20.0%
!! TTTATAAATGTGAGAATGTT+AGG + Chr8:72940995-72941014 MsG0880046403.01.T01:intron 20.0%
!!! AGTTTGTTTATAATTGAGAT+AGG - Chr8:72940478-72940497 None:intergenic 20.0%
!!! ATTTTGATTTTGACAAGTTT+GGG + Chr8:72938621-72938640 MsG0880046403.01.T01:CDS 20.0%
!!! GGTATTCCTTATTTATATTT+AGG + Chr8:72941938-72941957 MsG0880046403.01.T01:intron 20.0%
!!! GTAATTATTTTTACATTAGG+AGG - Chr8:72943590-72943609 None:intergenic 20.0%
!!! GTATCCATTTCTTATTTTTA+TGG - Chr8:72942647-72942666 None:intergenic 20.0%
!!! TATTTGGATATAATTTCTAG+TGG - Chr8:72938347-72938366 None:intergenic 20.0%
!!! TTGGATTTTAATTTTGTCAT+CGG + Chr8:72943129-72943148 MsG0880046403.01.T01:intron 20.0%
!!! TTTTCATAATTCATCTTTGA+CGG + Chr8:72940069-72940088 MsG0880046403.01.T01:intron 20.0%
! AAATCGTATTTGTGATAAGT+TGG + Chr8:72942364-72942383 MsG0880046403.01.T01:intron 25.0%
! AAGATGTATTCATGACAAAT+CGG - Chr8:72941457-72941476 None:intergenic 25.0%
! AAGCTAAAATAAAACTGAAC+AGG + Chr8:72939277-72939296 MsG0880046403.01.T01:intron 25.0%
! AATCAGTAGTAGAAACTAAA+AGG - Chr8:72937935-72937954 None:intergenic 25.0%
! AATCGTATTTGTGATAAGTT+GGG + Chr8:72942365-72942384 MsG0880046403.01.T01:intron 25.0%
! AATCGTGAAATAAGGAAATA+TGG + Chr8:72941996-72942015 MsG0880046403.01.T01:intron 25.0%
! AATTTATAAAGAAACCGGTT+AGG - Chr8:72940260-72940279 None:intergenic 25.0%
! AATTTCTCATTACATTCTTG+GGG + Chr8:72940774-72940793 MsG0880046403.01.T01:intron 25.0%
! AGAATACAATGTTTGATGAA+TGG + Chr8:72938243-72938262 MsG0880046403.01.T01:CDS 25.0%
! ATCACACTTAAATAAACCAT+AGG - Chr8:72939617-72939636 None:intergenic 25.0%
! ATGAGAAATTGGTTATTATG+AGG - Chr8:72940764-72940783 None:intergenic 25.0%
! ATGATTGCTTGAAAGATAAA+TGG - Chr8:72943159-72943178 None:intergenic 25.0%
! ATTGAAGGTTTAATATGAGA+CGG - Chr8:72943306-72943325 None:intergenic 25.0%
! CAAAAAATTTATGCTTTCGT+TGG - Chr8:72938414-72938433 None:intergenic 25.0%
! CAAGTTCTATAACTTTAACA+TGG - Chr8:72942538-72942557 None:intergenic 25.0%
! CAATTTCTCATTACATTCTT+GGG + Chr8:72940773-72940792 MsG0880046403.01.T01:intron 25.0%
! GAGAAGAATTCTCTAATTAT+AGG - Chr8:72938080-72938099 None:intergenic 25.0%
! TACACACATACTAAGAATAT+TGG + Chr8:72940505-72940524 MsG0880046403.01.T01:intron 25.0%
! TAGTCCATAAGAGAATAATA+CGG + Chr8:72941077-72941096 MsG0880046403.01.T01:intron 25.0%
! TATTACAAGATATGATACCT+TGG + Chr8:72938156-72938175 MsG0880046403.01.T01:CDS 25.0%
! TCATATAACTCTAGTGTTAT+AGG - Chr8:72943458-72943477 None:intergenic 25.0%
! TCTTCAATTGTCAAAATATG+AGG - Chr8:72938890-72938909 None:intergenic 25.0%
! TGTTTATAATTGAGATAGGA+GGG - Chr8:72940474-72940493 None:intergenic 25.0%
! TTAGATCATTGAATATCTCT+TGG - Chr8:72942675-72942694 None:intergenic 25.0%
! TTCCATAAAAAGAAAGAACT+AGG - Chr8:72941170-72941189 None:intergenic 25.0%
! TTGCATTCTGATGATTATAA+TGG + Chr8:72941817-72941836 MsG0880046403.01.T01:intron 25.0%
! TTGTTTATAATTGAGATAGG+AGG - Chr8:72940475-72940494 None:intergenic 25.0%
! TTTCATGACAGAAAAAGATA+TGG + Chr8:72942699-72942718 MsG0880046403.01.T01:intron 25.0%
!! ACACTTTTGCAAACATTTTA+TGG - Chr8:72940302-72940321 None:intergenic 25.0%
!! CACTTTTGCAAACATTTTAT+GGG - Chr8:72940301-72940320 None:intergenic 25.0%
!! TGTTTTCCTCATCATTATTT+TGG + Chr8:72939118-72939137 MsG0880046403.01.T01:intron 25.0%
!! TTCTTTCTTTTTATGGAAAC+TGG + Chr8:72941172-72941191 MsG0880046403.01.T01:intron 25.0%
!! TTTTACACAGAAAAATACCT+CGG - Chr8:72939044-72939063 None:intergenic 25.0%
!!! AAACTCATGCATTTTTTAAC+AGG + Chr8:72941284-72941303 MsG0880046403.01.T01:intron 25.0%
!!! AACTCATGCATTTTTTAACA+GGG + Chr8:72941285-72941304 MsG0880046403.01.T01:intron 25.0%
!!! AAGCATAAATTTTTTGCAGA+AGG + Chr8:72938418-72938437 MsG0880046403.01.T01:CDS 25.0%
!!! AGCATGTTTTAATGTTCTTA+TGG + Chr8:72938207-72938226 MsG0880046403.01.T01:CDS 25.0%
!!! ATTAGTCTTTTAGTTGTAGT+GGG + Chr8:72941853-72941872 MsG0880046403.01.T01:intron 25.0%
!!! ATTTCTTTTGAGAAATGGAA+AGG + Chr8:72940948-72940967 MsG0880046403.01.T01:intron 25.0%
!!! ATTTTTAGTCAAATGCAGTT+AGG - Chr8:72942449-72942468 None:intergenic 25.0%
!!! CATTTTGATTTTGACAAGTT+TGG + Chr8:72938620-72938639 MsG0880046403.01.T01:CDS 25.0%
!!! TACTACTGATTCAAAGATAA+GGG + Chr8:72937944-72937963 MsG0880046403.01.T01:CDS 25.0%
!!! TCATTATTTTGGAAGGTTAT+AGG + Chr8:72939129-72939148 MsG0880046403.01.T01:intron 25.0%
!!! TCTTCATTTCTTTTGAGAAA+TGG + Chr8:72940943-72940962 MsG0880046403.01.T01:intron 25.0%
!!! TTCCTAGTTCTTTCTTTTTA+TGG + Chr8:72941165-72941184 MsG0880046403.01.T01:intron 25.0%
!!! TTGTTTTTGCAAAATGATTG+TGG - Chr8:72941566-72941585 None:intergenic 25.0%
AAAATGCATGAGTTTAGTCA+TGG - Chr8:72941279-72941298 None:intergenic 30.0%
AAATGTAACAGAATAGGAGA+GGG - Chr8:72939307-72939326 None:intergenic 30.0%
AACCTCTTCTGACAAATATT+TGG - Chr8:72938363-72938382 None:intergenic 30.0%
AACCTTCCAAAATAATGATG+AGG - Chr8:72939127-72939146 None:intergenic 30.0%
ACAATGTTTGATGAATGGTT+AGG + Chr8:72938248-72938267 MsG0880046403.01.T01:CDS 30.0%
ACTAAAGATTAACTGCAATC+AGG - Chr8:72939442-72939461 None:intergenic 30.0%
AGAAAGCAAATCGTGAAATA+AGG + Chr8:72941988-72942007 MsG0880046403.01.T01:intron 30.0%
AGACAGAAATGTAACAGAAT+AGG - Chr8:72939313-72939332 None:intergenic 30.0%
AGCTTCAGTTCTATAGTTTA+GGG + Chr8:72940847-72940866 MsG0880046403.01.T01:intron 30.0%
ATAAGGCCTAATTATATCAC+TGG - Chr8:72940896-72940915 None:intergenic 30.0%
ATCCAAATATTTGTCAGAAG+AGG + Chr8:72938358-72938377 MsG0880046403.01.T01:CDS 30.0%
ATCGTATTTGTGATAAGTTG+GGG + Chr8:72942366-72942385 MsG0880046403.01.T01:intron 30.0%
ATGGTTTACTGCTTTCTAAT+AGG - Chr8:72939547-72939566 None:intergenic 30.0%
ATGTTAGAATGTTACTACTC+TGG - Chr8:72940664-72940683 None:intergenic 30.0%
ATGTTGTTCATACCTATAGA+AGG + Chr8:72941107-72941126 MsG0880046403.01.T01:intron 30.0%
ATTGTCATCAACATTGTTGT+CGG - Chr8:72938471-72938490 None:intergenic 30.0%
ATTTCTCATTACATTCTTGG+GGG + Chr8:72940775-72940794 MsG0880046403.01.T01:intron 30.0%
CATCAGATCATTTAATTGAC+AGG + Chr8:72939993-72940012 MsG0880046403.01.T01:intron 30.0%
CATTCATATCCAACTATGAA+AGG - Chr8:72939594-72939613 None:intergenic 30.0%
CATTGAATATCTCTTGGAAT+CGG - Chr8:72942669-72942688 None:intergenic 30.0%
CCAAGAATGTAATGAGAAAT+TGG - Chr8:72940775-72940794 None:intergenic 30.0%
CCAATTTCTCATTACATTCT+TGG + Chr8:72940772-72940791 MsG0880046403.01.T01:intron 30.0%
CTAATCCTAACATGCATTAA+TGG + Chr8:72939068-72939087 MsG0880046403.01.T01:intron 30.0%
CTAATTGAATCTATAACTGC+AGG + Chr8:72943354-72943373 MsG0880046403.01.T01:intron 30.0%
CTAGAACCAGTGATATAATT+AGG + Chr8:72940887-72940906 MsG0880046403.01.T01:intron 30.0%
CTTAACTGATCTCTTGTAAT+TGG - Chr8:72942025-72942044 None:intergenic 30.0%
GATTCCGTATTATTCTCTTA+TGG - Chr8:72941084-72941103 None:intergenic 30.0%
GATTGCAGTTAATCTTTAGT+GGG + Chr8:72939442-72939461 MsG0880046403.01.T01:intron 30.0%
GCAAGATATTTGAAGATGAA+AGG + Chr8:72940226-72940245 MsG0880046403.01.T01:intron 30.0%
GTCAACTCAAACAAAAAATG+AGG + Chr8:72942130-72942149 MsG0880046403.01.T01:intron 30.0%
TAGATGAAAGAGAACATACA+AGG - Chr8:72939339-72939358 None:intergenic 30.0%
TATTAGAAAGCAGTAAACCA+TGG + Chr8:72939546-72939565 MsG0880046403.01.T01:intron 30.0%
TCTCCATTTCTCAAAAGAAA+TGG + Chr8:72940822-72940841 MsG0880046403.01.T01:intron 30.0%
TCTGAACTAACTACAGAAAA+AGG + Chr8:72939195-72939214 MsG0880046403.01.T01:intron 30.0%
TCTTCTGACTAATAATCCAA+CGG - Chr8:72939799-72939818 None:intergenic 30.0%
TGAAATGTACCTTTCATAGT+TGG + Chr8:72939582-72939601 MsG0880046403.01.T01:intron 30.0%
TGATTGCAGTTAATCTTTAG+TGG + Chr8:72939441-72939460 MsG0880046403.01.T01:intron 30.0%
TGTAATGACTGTGAAAAGAA+AGG + Chr8:72943385-72943404 MsG0880046403.01.T01:three_prime_UTR 30.0%
TTACATTAGGAGGATTATTC+TGG - Chr8:72943580-72943599 None:intergenic 30.0%
TTTAATGTTCTTATGGTCCA+TGG + Chr8:72938214-72938233 MsG0880046403.01.T01:CDS 30.0%
! AGTTGTTACTTGTTAGGTAT+AGG - Chr8:72938826-72938845 None:intergenic 30.0%
! ATTTGTCTGTTTGAAATAGC+TGG + Chr8:72943097-72943116 MsG0880046403.01.T01:intron 30.0%
! ATTTTGCCATGGATAAATTG+CGG - Chr8:72940191-72940210 None:intergenic 30.0%
! CACAATACCCTTTTATTGAT+TGG - Chr8:72939163-72939182 None:intergenic 30.0%
! GAAAATGTCTGATGAGTTTT+CGG + Chr8:72943245-72943264 MsG0880046403.01.T01:three_prime_UTR 30.0%
! GATAACTTAAGTTGCATTTG+TGG + Chr8:72941587-72941606 MsG0880046403.01.T01:intron 30.0%
! TTTTTGCAAAATGATTGTGG+AGG - Chr8:72941563-72941582 None:intergenic 30.0%
! TTTTTGCAGAAGGATCTTAT+TGG + Chr8:72938428-72938447 MsG0880046403.01.T01:CDS 30.0%
!! CAATGTTGATGACAATGTTA+AGG + Chr8:72938475-72938494 MsG0880046403.01.T01:CDS 30.0%
!! CTACTACTGATTCAAAGATA+AGG + Chr8:72937943-72937962 MsG0880046403.01.T01:CDS 30.0%
!! TCTCCATTTCTTTTGAGAAA+TGG - Chr8:72940828-72940847 None:intergenic 30.0%
!! TTCTAAAACCTTCCTTCTAT+AGG - Chr8:72941122-72941141 None:intergenic 30.0%
!!! AGGAAGGTTTTAGAAACTTA+TGG + Chr8:72941127-72941146 MsG0880046403.01.T01:intron 30.0%
!!! CTCTATTACTACGACTTTTT+TGG - Chr8:72940922-72940941 None:intergenic 30.0%
!!! GATTAGTCTTTTAGTTGTAG+TGG + Chr8:72941852-72941871 MsG0880046403.01.T01:intron 30.0%
!!! GGAAGGTTTTAGAAACTTAT+GGG + Chr8:72941128-72941147 MsG0880046403.01.T01:intron 30.0%
!!! TACGACTTTTTTGGTGTATA+AGG - Chr8:72940913-72940932 None:intergenic 30.0%
!!! TAGCTTTTAGCTTTTAGCTT+GGG - Chr8:72939263-72939282 None:intergenic 30.0%
!!! TTAGCTTTTAGCTTTTAGCT+TGG - Chr8:72939264-72939283 None:intergenic 30.0%
!!! TTCCTCATCATTATTTTGGA+AGG + Chr8:72939122-72939141 MsG0880046403.01.T01:intron 30.0%
AAGATCATAGGATGCATACT+TGG + Chr8:72938116-72938135 MsG0880046403.01.T01:CDS 35.0%
AATGTATGCAAGCATGAAGT+TGG - Chr8:72939961-72939980 None:intergenic 35.0%
AGATATGATACCTTGGCTAA+TGG + Chr8:72938163-72938182 MsG0880046403.01.T01:CDS 35.0%
AGCTAAAGCAAGTATATTCC+TGG - Chr8:72941620-72941639 None:intergenic 35.0%
AGGAATATTCAAATCTGCCA+AGG + Chr8:72942893-72942912 MsG0880046403.01.T01:intron 35.0%
AGTGCATCTAACATCCTAAA+AGG - Chr8:72943213-72943232 None:intergenic 35.0%
AGTTGCCATTAATGCATGTT+AGG - Chr8:72939076-72939095 None:intergenic 35.0%
ATACTATCATAATGCCTTGC+AGG + Chr8:72943186-72943205 MsG0880046403.01.T01:intron 35.0%
ATCTCGAGAAGGTAATAAGA+AGG + Chr8:72938678-72938697 MsG0880046403.01.T01:intron 35.0%
ATGCAGAGAGAAATCTTTAG+AGG + Chr8:72941423-72941442 MsG0880046403.01.T01:three_prime_UTR 35.0%
ATTGACCAAATTGTAGATGC+TGG - Chr8:72939395-72939414 None:intergenic 35.0%
CAATCAGGAAGAAAACATGT+AGG - Chr8:72939427-72939446 None:intergenic 35.0%
CAGAGTTTCACTACTTGAAT+AGG + Chr8:72942773-72942792 MsG0880046403.01.T01:intron 35.0%
CATGACAGAAAAAGATATGG+TGG + Chr8:72942702-72942721 MsG0880046403.01.T01:intron 35.0%
CATTGTATTCTTAGTAGCCA+TGG - Chr8:72938234-72938253 None:intergenic 35.0%
CTATACCAGCATCTACAATT+TGG + Chr8:72939387-72939406 MsG0880046403.01.T01:intron 35.0%
CTGCATTTGACTAAAAATGC+AGG + Chr8:72942451-72942470 MsG0880046403.01.T01:intron 35.0%
CTTAGTAAGCTTCAGCTTAA+GGG - Chr8:72942093-72942112 None:intergenic 35.0%
GAAATGTAACAGAATAGGAG+AGG - Chr8:72939308-72939327 None:intergenic 35.0%
GAGCTTCAGTTCTATAGTTT+AGG + Chr8:72940846-72940865 MsG0880046403.01.T01:intron 35.0%
GATCCTCATGAACAAATCTA+TGG + Chr8:72939887-72939906 MsG0880046403.01.T01:CDS 35.0%
GATGTGAGTGATATGCTATA+CGG + Chr8:72941917-72941936 MsG0880046403.01.T01:intron 35.0%
GCTGCAAATATATCTTACCA+CGG + Chr8:72941730-72941749 MsG0880046403.01.T01:intron 35.0%
TAACATGCATTAATGGCAAC+TGG + Chr8:72939075-72939094 MsG0880046403.01.T01:intron 35.0%
TAGATGCTGGTATAGAGATA+AGG - Chr8:72939382-72939401 None:intergenic 35.0%
TAGGATGTTAGATGCACTAT+TGG + Chr8:72943215-72943234 MsG0880046403.01.T01:three_prime_UTR 35.0%
TAGTCAGAAGATCTCTTCTA+TGG + Chr8:72939808-72939827 MsG0880046403.01.T01:intron 35.0%
TAGTTGGATATGAATGCCTA+TGG + Chr8:72939598-72939617 MsG0880046403.01.T01:intron 35.0%
TCCATAACTAACTCACTTCT+GGG - Chr8:72941031-72941050 None:intergenic 35.0%
TCCATGGCAAAATATTACTG+CGG + Chr8:72940198-72940217 MsG0880046403.01.T01:intron 35.0%
TCTCGAGAAGGTAATAAGAA+GGG + Chr8:72938679-72938698 MsG0880046403.01.T01:intron 35.0%
TGCAATGAAGTAAAACCAGT+GGG + Chr8:72938572-72938591 MsG0880046403.01.T01:CDS 35.0%
TGCTTAAATACAGAGAAGCT+AGG - Chr8:72943513-72943532 None:intergenic 35.0%
TGTTAAAAACCTGAAGTGTG+TGG - Chr8:72939755-72939774 None:intergenic 35.0%
TGTTATAGGAACCACAACAA+GGG - Chr8:72943444-72943463 None:intergenic 35.0%
TGTTCATACCTATAGAAGGA+AGG + Chr8:72941111-72941130 MsG0880046403.01.T01:intron 35.0%
TTAGAGAATTCTTCTCGAAC+CGG + Chr8:72938084-72938103 MsG0880046403.01.T01:CDS 35.0%
TTCATACTCATTGTGTTCCA+TGG - Chr8:72939566-72939585 None:intergenic 35.0%
TTCCATAACTAACTCACTTC+TGG - Chr8:72941032-72941051 None:intergenic 35.0%
TTGATGAATGGTTAGGTGAA+TGG + Chr8:72938255-72938274 MsG0880046403.01.T01:CDS 35.0%
TTTCTAATAGGACCATACCA+TGG - Chr8:72939535-72939554 None:intergenic 35.0%
! AACTTAAGTTGCATTTGTGG+TGG + Chr8:72941590-72941609 MsG0880046403.01.T01:intron 35.0%
! ACAAGTAACAACTTAGCTCT+TGG + Chr8:72938833-72938852 MsG0880046403.01.T01:intron 35.0%
! ATTATGTACGACTTTTCCTG+AGG - Chr8:72938728-72938747 None:intergenic 35.0%
! CAACCATAGATTTGTTCATG+AGG - Chr8:72939893-72939912 None:intergenic 35.0%
! CTCAACTTTTCTCCAAAATG+TGG - Chr8:72942247-72942266 None:intergenic 35.0%
! GAGCTAAGTTGTTACTTGTT+AGG - Chr8:72938832-72938851 None:intergenic 35.0%
! TAAGGCGTCATCATTTAATC+AGG + Chr8:72937979-72937998 MsG0880046403.01.T01:CDS 35.0%
! TCGTATTTGTGATAAGTTGG+GGG + Chr8:72942367-72942386 MsG0880046403.01.T01:intron 35.0%
! TGCATTTGGGATAAAGAGTT+GGG + Chr8:72942302-72942321 MsG0880046403.01.T01:intron 35.0%
! TTATGTACGACTTTTCCTGA+GGG - Chr8:72938727-72938746 None:intergenic 35.0%
! TTCTTTTAATCTCATCCCTG+TGG - Chr8:72942930-72942949 None:intergenic 35.0%
! TTGCATTTGGGATAAAGAGT+TGG + Chr8:72942301-72942320 MsG0880046403.01.T01:intron 35.0%
! TTTGAAATAGCTGGACTGTT+GGG + Chr8:72943106-72943125 MsG0880046403.01.T01:intron 35.0%
! TTTTCTCCAAAATGTGGTCT+AGG - Chr8:72942241-72942260 None:intergenic 35.0%
!! AAGGACTTTGAAATTCCACA+GGG + Chr8:72942912-72942931 MsG0880046403.01.T01:intron 35.0%
!! CAAGTGACTTGCTACATATT+GGG - Chr8:72941650-72941669 None:intergenic 35.0%
!! CACATTTTGGAGAAAAGTTG+AGG + Chr8:72942245-72942264 MsG0880046403.01.T01:intron 35.0%
!!! AAGTGTTATTTTCCCTGGTT+AGG - Chr8:72939238-72939257 None:intergenic 35.0%
!!! AGTTAGTCTTTTGACACTAG+TGG - Chr8:72940703-72940722 None:intergenic 35.0%
!!! TGGTCTTGTGATTTTCCTAA+TGG + Chr8:72938768-72938787 MsG0880046403.01.T01:intron 35.0%
AAATACAGAGAAGCTAGGAG+AGG - Chr8:72943508-72943527 None:intergenic 40.0%
AAATCTATGAGCTCGATGCA+TGG - Chr8:72942954-72942973 None:intergenic 40.0%
AACTCGGCATAAGTTGCAAT+AGG - Chr8:72941326-72941345 None:intergenic 40.0%
AAGGTTCATAATGCAGCACA+AGG + Chr8:72938494-72938513 MsG0880046403.01.T01:CDS 40.0%
AATGATCTGATGCCTCATCA+TGG - Chr8:72939985-72940004 None:intergenic 40.0%
ACCCAGAAGTGAGTTAGTTA+TGG + Chr8:72941027-72941046 MsG0880046403.01.T01:intron 40.0%
ACCGCGAGGAAATAGAAATT+TGG + Chr8:72938054-72938073 MsG0880046403.01.T01:CDS 40.0%
ACTCAAATACAGTACAGGTC+GGG - Chr8:72939512-72939531 None:intergenic 40.0%
ACTCGGCATAAGTTGCAATA+GGG - Chr8:72941325-72941344 None:intergenic 40.0%
AGATTGGAATAGACGAACGA+TGG - Chr8:72939724-72939743 None:intergenic 40.0%
AGTTAGTTATGGAATGCCCT+TGG + Chr8:72941038-72941057 MsG0880046403.01.T01:intron 40.0%
ATCCAACGGCTGAAAATATG+TGG - Chr8:72939785-72939804 None:intergenic 40.0%
ATGAATGGTTAGGTGAATGG+TGG + Chr8:72938258-72938277 MsG0880046403.01.T01:CDS 40.0%
ATGCATGAGTTTAGTCATGG+TGG - Chr8:72941276-72941295 None:intergenic 40.0%
ATGGAAACTGGTCAAGTACA+CGG + Chr8:72941184-72941203 MsG0880046403.01.T01:intron 40.0%
ATGGTTGCAAACACTACAAG+AGG + Chr8:72939906-72939925 MsG0880046403.01.T01:CDS 40.0%
ATGTGAGAATGTTAGGTGAG+TGG + Chr8:72941002-72941021 MsG0880046403.01.T01:intron 40.0%
CAATATCAAAAGCGATGGAC+AGG + Chr8:72939835-72939854 MsG0880046403.01.T01:CDS 40.0%
CATGCACTCAACATGTTTCA+AGG + Chr8:72941519-72941538 MsG0880046403.01.T01:three_prime_UTR 40.0%
CATGGACTCAAATACAGTAC+AGG - Chr8:72939517-72939536 None:intergenic 40.0%
CCAATATGTAGCAAGTCACT+TGG + Chr8:72941648-72941667 MsG0880046403.01.T01:three_prime_UTR 40.0%
CCATGGCAAAATATTACTGC+GGG + Chr8:72940199-72940218 MsG0880046403.01.T01:intron 40.0%
CTGCAATGAAGTAAAACCAG+TGG + Chr8:72938571-72938590 MsG0880046403.01.T01:CDS 40.0%
CTGTACTGTATTTGAGTCCA+TGG + Chr8:72939515-72939534 MsG0880046403.01.T01:intron 40.0%
CTGTATTTGAGTCCATGGTA+TGG + Chr8:72939520-72939539 MsG0880046403.01.T01:intron 40.0%
CTGTGGAATTTCAAAGTCCT+TGG - Chr8:72942913-72942932 None:intergenic 40.0%
CTTGAAACATGTTGAGTGCA+TGG - Chr8:72941521-72941540 None:intergenic 40.0%
GAAAGGTAATGTAGCCTAAC+CGG + Chr8:72940243-72940262 MsG0880046403.01.T01:intron 40.0%
GAACAGCAAGATTAAGTGAC+AGG - Chr8:72941219-72941238 None:intergenic 40.0%
GAAGCCAATATCAAAAGCGA+TGG + Chr8:72939830-72939849 MsG0880046403.01.T01:CDS 40.0%
GAATGGGTACAGTATCTCTA+AGG + Chr8:72938280-72938299 MsG0880046403.01.T01:CDS 40.0%
GACTCAAATACAGTACAGGT+CGG - Chr8:72939513-72939532 None:intergenic 40.0%
GATATACACAGTCATTACCG+TGG - Chr8:72941750-72941769 None:intergenic 40.0%
GCAAACATCTATGCTCACAT+TGG - Chr8:72943486-72943505 None:intergenic 40.0%
GCCAAATTTCTATTTCCTCG+CGG - Chr8:72938058-72938077 None:intergenic 40.0%
GCTAATGGCATCTTTAACAC+AGG + Chr8:72938178-72938197 MsG0880046403.01.T01:CDS 40.0%
GCTTAGTAAGCTTCAGCTTA+AGG - Chr8:72942094-72942113 None:intergenic 40.0%
GTGTGTGGCTATCATAAGAT+TGG - Chr8:72939740-72939759 None:intergenic 40.0%
GTGTTATAGGAACCACAACA+AGG - Chr8:72943445-72943464 None:intergenic 40.0%
GTTAAAGATGCCATTAGCCA+AGG - Chr8:72938176-72938195 None:intergenic 40.0%
GTTAGTTATGGAATGCCCTT+GGG + Chr8:72941039-72941058 MsG0880046403.01.T01:intron 40.0%
TAATACAGAGCCTACTTACG+AGG + Chr8:72938744-72938763 MsG0880046403.01.T01:intron 40.0%
TAATCAGGAAGCTGCAAGAA+AGG + Chr8:72937994-72938013 MsG0880046403.01.T01:CDS 40.0%
TACCATAAATGCCCTTGTTG+TGG + Chr8:72943430-72943449 MsG0880046403.01.T01:three_prime_UTR 40.0%
TAGAGAATTCTTCTCGAACC+GGG + Chr8:72938085-72938104 MsG0880046403.01.T01:CDS 40.0%
TATTGCAACTTATGCCGAGT+TGG + Chr8:72941325-72941344 MsG0880046403.01.T01:CDS 40.0%
TCATGAGGATCCTTGTAAGA+TGG - Chr8:72939878-72939897 None:intergenic 40.0%
TCCAACGGCTGAAAATATGT+GGG - Chr8:72939784-72939803 None:intergenic 40.0%
TGAGATAAATTGTGTGTCCC+AGG + Chr8:72940321-72940340 MsG0880046403.01.T01:intron 40.0%
TGGGAAACATCCATCTTACA+AGG + Chr8:72939865-72939884 MsG0880046403.01.T01:CDS 40.0%
TGTAAGATGGATGTTTCCCA+GGG - Chr8:72939865-72939884 None:intergenic 40.0%
TTATGATAGCCACACACTTC+AGG + Chr8:72939743-72939762 MsG0880046403.01.T01:intron 40.0%
TTATGGTAAAGCCAGTGGAA+GGG - Chr8:72943418-72943437 None:intergenic 40.0%
TTCTGATCATATAAACCGCG+AGG + Chr8:72938040-72938059 MsG0880046403.01.T01:CDS 40.0%
TTCTTGCCGCAATTTATCCA+TGG + Chr8:72940182-72940201 MsG0880046403.01.T01:intron 40.0%
TTGCATACATTGCCATGATG+AGG + Chr8:72939970-72939989 MsG0880046403.01.T01:intron 40.0%
TTGTAAGATGGATGTTTCCC+AGG - Chr8:72939866-72939885 None:intergenic 40.0%
TTTATGGTAAAGCCAGTGGA+AGG - Chr8:72943419-72943438 None:intergenic 40.0%
! AACTTATGCCGAGTTGGAAA+GGG + Chr8:72941331-72941350 MsG0880046403.01.T01:CDS 40.0%
! AAGAAAACATGTAGGTGTCG+AGG - Chr8:72939419-72939438 None:intergenic 40.0%
! AGTTAATCTTTAGTGGGCCA+GGG + Chr8:72939448-72939467 MsG0880046403.01.T01:intron 40.0%
! ATGAGTTTTCGGTCAAACTC+AGG + Chr8:72943256-72943275 MsG0880046403.01.T01:three_prime_UTR 40.0%
! CAAGAGGAACTGTAAGCTTT+TGG + Chr8:72939922-72939941 MsG0880046403.01.T01:intron 40.0%
! CTCATCAGACATTTTCTGCT+CGG - Chr8:72943241-72943260 None:intergenic 40.0%
! CTGCATTTGGGATATAGCTA+CGG + Chr8:72942423-72942442 MsG0880046403.01.T01:intron 40.0%
! GCAGTTGCACAATAGTTTTC+AGG - Chr8:72943067-72943086 None:intergenic 40.0%
! GTTTGAAATAGCTGGACTGT+TGG + Chr8:72943105-72943124 MsG0880046403.01.T01:intron 40.0%
! TATGTACGACTTTTCCTGAG+GGG - Chr8:72938726-72938745 None:intergenic 40.0%
!! AACCACAACAAGGGCATTTA+TGG - Chr8:72943435-72943454 None:intergenic 40.0%
!! AGAAAACATGTAGGTGTCGA+GGG - Chr8:72939418-72939437 None:intergenic 40.0%
!! AGTCTTTTAGTTGTAGTGGG+AGG + Chr8:72941856-72941875 MsG0880046403.01.T01:intron 40.0%
!! CAAGGACTTTGAAATTCCAC+AGG + Chr8:72942911-72942930 MsG0880046403.01.T01:intron 40.0%
!! CCAAGTGACTTGCTACATAT+TGG - Chr8:72941651-72941670 None:intergenic 40.0%
!! CTGTCCATCGCTTTTGATAT+TGG - Chr8:72939837-72939856 None:intergenic 40.0%
AAATAGCTGGACTGTTGGGT+TGG + Chr8:72943110-72943129 MsG0880046403.01.T01:intron 45.0%
AACACACACATGTGTGAGAG+AGG - Chr8:72940735-72940754 None:intergenic 45.0%
AAGACATCATCGTGTATGCC+TGG - Chr8:72940342-72940361 None:intergenic 45.0%
ACAAGACCAACCTCGTAAGT+AGG - Chr8:72938757-72938776 None:intergenic 45.0%
ACAGAGGCTAGACTGCATTT+GGG + Chr8:72942411-72942430 MsG0880046403.01.T01:intron 45.0%
ACATCCTAAAAGGACCTGCA+AGG - Chr8:72943203-72943222 None:intergenic 45.0%
AGACATCATCGTGTATGCCT+GGG - Chr8:72940341-72940360 None:intergenic 45.0%
AGTGGCTCAACATTCTGTAG+AGG - Chr8:72938329-72938348 None:intergenic 45.0%
ATGTTTAAACCTGCAAGCCC+TGG - Chr8:72939468-72939487 None:intergenic 45.0%
CATGCAAGCCTTCTTCATCT+TGG + Chr8:72939485-72939504 MsG0880046403.01.T01:intron 45.0%
CTCGTCTCTTAGATGCAATC+TGG - Chr8:72942185-72942204 None:intergenic 45.0%
GAGTCAAGATGATCTCGAGA+AGG + Chr8:72938667-72938686 MsG0880046403.01.T01:CDS 45.0%
GGCAAGAAATGATGAGCATG+TGG - Chr8:72940170-72940189 None:intergenic 45.0%
GGCATTTATGGTAAAGCCAG+TGG - Chr8:72943423-72943442 None:intergenic 45.0%
GTGGCTCAACATTCTGTAGA+GGG - Chr8:72938328-72938347 None:intergenic 45.0%
TCAGACTCCAGATTGCATCT+GGG + Chr8:72942326-72942345 MsG0880046403.01.T01:intron 45.0%
TGCATCTAAGAGACGAGCTA+TGG + Chr8:72942188-72942207 MsG0880046403.01.T01:intron 45.0%
TGCATTAATGGCAACTGGCA+AGG + Chr8:72939080-72939099 MsG0880046403.01.T01:intron 45.0%
TGGAAACTGGTCAAGTACAC+GGG + Chr8:72941185-72941204 MsG0880046403.01.T01:intron 45.0%
TGGCTCAACATTCTGTAGAG+GGG - Chr8:72938327-72938346 None:intergenic 45.0%
TGTCGGGCAAACTTGCATTT+GGG + Chr8:72942289-72942308 MsG0880046403.01.T01:intron 45.0%
TTCAGACTCCAGATTGCATC+TGG + Chr8:72942325-72942344 MsG0880046403.01.T01:intron 45.0%
! AATGCCTTGCAGGTCCTTTT+AGG + Chr8:72943196-72943215 MsG0880046403.01.T01:intron 45.0%
! ACGTAGACAGTTTTTGACCG+AGG + Chr8:72939024-72939043 MsG0880046403.01.T01:intron 45.0%
! AGCATGAAGTTGGTTGCAAC+AGG - Chr8:72939951-72939970 None:intergenic 45.0%
! CAACTTATGCCGAGTTGGAA+AGG + Chr8:72941330-72941349 MsG0880046403.01.T01:CDS 45.0%
! CAGTTAATCTTTAGTGGGCC+AGG + Chr8:72939447-72939466 MsG0880046403.01.T01:intron 45.0%
! CCCGCAGTAATATTTTGCCA+TGG - Chr8:72940202-72940221 None:intergenic 45.0%
! CGACTAGTCGAAGCAACTAA+TGG - Chr8:72942492-72942511 None:intergenic 45.0%
! CTTTTGTCCCAGATGCAATC+TGG - Chr8:72942336-72942355 None:intergenic 45.0%
! GCATGAAGTTGGTTGCAACA+GGG - Chr8:72939950-72939969 None:intergenic 45.0%
! GGTTAGGTGAATGGTGGAAT+GGG + Chr8:72938264-72938283 MsG0880046403.01.T01:CDS 45.0%
! TCCCACATATTTTCAGCCGT+TGG + Chr8:72939780-72939799 MsG0880046403.01.T01:intron 45.0%
! TGCATCTGGGACAAAAGTCA+AGG + Chr8:72942339-72942358 MsG0880046403.01.T01:intron 45.0%
! TGGTTAGGTGAATGGTGGAA+TGG + Chr8:72938263-72938282 MsG0880046403.01.T01:CDS 45.0%
! TTAGTTGCTTCGACTAGTCG+TGG + Chr8:72942492-72942511 MsG0880046403.01.T01:intron 45.0%
!! ACCATCTTTTGGAGAAGAGC+GGG + Chr8:72942215-72942234 MsG0880046403.01.T01:intron 45.0%
!! AGTATCTCTAAGGCAGCAGA+TGG + Chr8:72938290-72938309 MsG0880046403.01.T01:CDS 45.0%
!! ATGGACTAGCTACTATCAGC+TGG - Chr8:72941065-72941084 None:intergenic 45.0%
!! GACCATCTTTTGGAGAAGAG+CGG + Chr8:72942214-72942233 MsG0880046403.01.T01:intron 45.0%
!! GATGAGCATGTGGCATTGAT+TGG - Chr8:72940160-72940179 None:intergenic 45.0%
!! TAAGGGACAAGAGAGTGCTA+AGG + Chr8:72937961-72937980 MsG0880046403.01.T01:CDS 45.0%
!! TGACTTGCTACATATTGGGC+AGG - Chr8:72941646-72941665 None:intergenic 45.0%
!!! GGGCTAAGTGTTATTTTCCC+TGG - Chr8:72939243-72939262 None:intergenic 45.0%
AAACTGGTCAAGTACACGGG+GGG + Chr8:72941188-72941207 MsG0880046403.01.T01:intron 50.0%
ACACACATGTGTGAGAGAGG+AGG - Chr8:72940732-72940751 None:intergenic 50.0%
ACAGAGCCTACTTACGAGGT+TGG + Chr8:72938748-72938767 MsG0880046403.01.T01:intron 50.0%
AGCTGAACGTGTTCCTAACC+AGG + Chr8:72939222-72939241 MsG0880046403.01.T01:intron 50.0%
AGTGCATGGCATGACCACAT+GGG - Chr8:72941507-72941526 None:intergenic 50.0%
CAAGTCACTTGGAGACATGC+AGG + Chr8:72941659-72941678 MsG0880046403.01.T01:three_prime_UTR 50.0%
CACCCAAACCCTTTCCAACT+CGG - Chr8:72941342-72941361 None:intergenic 50.0%
CTATGATCTTCCCTTGCTCC+CGG - Chr8:72938106-72938125 None:intergenic 50.0%
GAAACTGGTCAAGTACACGG+GGG + Chr8:72941187-72941206 MsG0880046403.01.T01:intron 50.0%
GACAGAGGCTAGACTGCATT+TGG + Chr8:72942410-72942429 MsG0880046403.01.T01:intron 50.0%
GCTGAACGTGTTCCTAACCA+GGG + Chr8:72939223-72939242 MsG0880046403.01.T01:intron 50.0%
GGAAACTGGTCAAGTACACG+GGG + Chr8:72941186-72941205 MsG0880046403.01.T01:intron 50.0%
GTGTCGGGCAAACTTGCATT+TGG + Chr8:72942288-72942307 MsG0880046403.01.T01:intron 50.0%
TCTAAGAGACGAGCTATGGC+AGG + Chr8:72942192-72942211 MsG0880046403.01.T01:intron 50.0%
! ATGCCGAGTTGGAAAGGGTT+TGG + Chr8:72941336-72941355 MsG0880046403.01.T01:CDS 50.0%
! CATGTCTAGGACAGAGACAG+AGG + Chr8:72942395-72942414 MsG0880046403.01.T01:intron 50.0%
! GCTATGGCAGGACCATCTTT+TGG + Chr8:72942204-72942223 MsG0880046403.01.T01:intron 50.0%
! TGACTTGTCATAGTGCCCAC+TGG - Chr8:72938590-72938609 None:intergenic 50.0%
! TGCCGAGTTGGAAAGGGTTT+GGG + Chr8:72941337-72941356 MsG0880046403.01.T01:CDS 50.0%
!! TGCATTTGTGGTGGACTTCC+AGG + Chr8:72941599-72941618 MsG0880046403.01.T01:intron 50.0%
AGCGATGGACAGGAATTCCC+TGG + Chr8:72939845-72939864 MsG0880046403.01.T01:CDS 55.0%
AGCTACTATCAGCTGGCCCA+AGG - Chr8:72941058-72941077 None:intergenic 55.0%
AGTTGAGGCCAACCCACGTA+TGG + Chr8:72942260-72942279 MsG0880046403.01.T01:intron 55.0%
CACTACTCCCATACGTGGGT+TGG - Chr8:72942271-72942290 None:intergenic 55.0%
CATGGCATGACCACATGGGA+GGG - Chr8:72941503-72941522 None:intergenic 55.0%
CATGTGTGAGAGAGGAGGAG+AGG - Chr8:72940727-72940746 None:intergenic 55.0%
CCACGTATGGGAGTAGTGTC+GGG + Chr8:72942273-72942292 MsG0880046403.01.T01:intron 55.0%
CCAGTAAAAGCCCTCCCATG+TGG + Chr8:72941490-72941509 MsG0880046403.01.T01:three_prime_UTR 55.0%
CCCACGTATGGGAGTAGTGT+CGG + Chr8:72942272-72942291 MsG0880046403.01.T01:intron 55.0%
CCGACACTACTCCCATACGT+GGG - Chr8:72942275-72942294 None:intergenic 55.0%
CGGGAGCAAGGGAAGATCAT+AGG + Chr8:72938104-72938123 MsG0880046403.01.T01:CDS 55.0%
GAGTGCATGGCATGACCACA+TGG - Chr8:72941508-72941527 None:intergenic 55.0%
GCCCGCTCTTCTCCAAAAGA+TGG - Chr8:72942219-72942238 None:intergenic 55.0%
GCGATGGACAGGAATTCCCT+GGG + Chr8:72939846-72939865 MsG0880046403.01.T01:CDS 55.0%
GCTACTATCAGCTGGCCCAA+GGG - Chr8:72941057-72941076 None:intergenic 55.0%
GGTCGGGTCCAAGATGAAGA+AGG - Chr8:72939496-72939515 None:intergenic 55.0%
GTTGAGGCCAACCCACGTAT+GGG + Chr8:72942261-72942280 MsG0880046403.01.T01:intron 55.0%
GTTGGGGGCAGATCATGTCT+AGG + Chr8:72942382-72942401 MsG0880046403.01.T01:intron 55.0%
TCTTCTCGAACCGGGAGCAA+GGG + Chr8:72938093-72938112 MsG0880046403.01.T01:CDS 55.0%
TTCTTCTCGAACCGGGAGCA+AGG + Chr8:72938092-72938111 MsG0880046403.01.T01:CDS 55.0%
! ACGACTTTTCCTGAGGGGCT+AGG - Chr8:72938721-72938740 None:intergenic 55.0%
! AGCGGGCCTAGACCACATTT+TGG + Chr8:72942232-72942251 MsG0880046403.01.T01:intron 55.0%
! CCACATGGGAGGGCTTTTAC+TGG - Chr8:72941493-72941512 None:intergenic 55.0%
! GAGGGCTTTTACTGGAGAGC+AGG - Chr8:72941485-72941504 None:intergenic 55.0%
! GTTGCTTCGACTAGTCGTGG+TGG + Chr8:72942495-72942514 MsG0880046403.01.T01:intron 55.0%
! TCTGGTCCTAGCTCTTGTCC+TGG - Chr8:72942167-72942186 None:intergenic 55.0%
AAGGAGCAGCTCCCTTCCAC+TGG + Chr8:72943404-72943423 MsG0880046403.01.T01:three_prime_UTR 60.0%
AATGAGGCCAGAGCGCATCC+AGG + Chr8:72942146-72942165 MsG0880046403.01.T01:intron 60.0%
CCCGACACTACTCCCATACG+TGG - Chr8:72942276-72942295 None:intergenic 60.0%
CTCTTGTCCTGGATGCGCTC+TGG - Chr8:72942156-72942175 None:intergenic 60.0%
GCATGGCATGACCACATGGG+AGG - Chr8:72941504-72941523 None:intergenic 60.0%
GCGCATCCAGGACAAGAGCT+AGG + Chr8:72942158-72942177 MsG0880046403.01.T01:intron 60.0%
TGACTCTTGCCTAGCCCCTC+AGG + Chr8:72938709-72938728 MsG0880046403.01.T01:intron 60.0%
! TTTAGTGGGCCAGGGCTTGC+AGG + Chr8:72939456-72939475 MsG0880046403.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 72937897 72943689 72937897 ID=MsG0880046403.01;Name=MsG0880046403.01
Chr8 mRNA 72937897 72943689 72937897 ID=MsG0880046403.01.T01;Parent=MsG0880046403.01;Name=MsG0880046403.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0.6|0.66|1|0.4|0.33|6|602|328
Chr8 exon 72937897 72938688 72937897 ID=MsG0880046403.01.T01:exon:18871;Parent=MsG0880046403.01.T01
Chr8 exon 72939815 72939932 72939815 ID=MsG0880046403.01.T01:exon:18872;Parent=MsG0880046403.01.T01
Chr8 exon 72941306 72941540 72941306 ID=MsG0880046403.01.T01:exon:18873;Parent=MsG0880046403.01.T01
Chr8 exon 72941621 72941680 72941621 ID=MsG0880046403.01.T01:exon:18874;Parent=MsG0880046403.01.T01
Chr8 exon 72943208 72943277 72943208 ID=MsG0880046403.01.T01:exon:18875;Parent=MsG0880046403.01.T01
Chr8 exon 72943376 72943689 72943376 ID=MsG0880046403.01.T01:exon:18876;Parent=MsG0880046403.01.T01
Chr8 CDS 72937897 72938688 72937897 ID=MsG0880046403.01.T01:cds;Parent=MsG0880046403.01.T01
Chr8 CDS 72939815 72939932 72939815 ID=MsG0880046403.01.T01:cds;Parent=MsG0880046403.01.T01
Chr8 CDS 72941306 72941382 72941306 ID=MsG0880046403.01.T01:cds;Parent=MsG0880046403.01.T01
Chr8 three_prime_UTR 72941383 72941540 72941383 ID=MsG0880046403.01.T01:three_prime_utr;Parent=MsG0880046403.01.T01
Chr8 three_prime_UTR 72941621 72941680 72941621 ID=MsG0880046403.01.T01:three_prime_utr;Parent=MsG0880046403.01.T01
Chr8 three_prime_UTR 72943208 72943277 72943208 ID=MsG0880046403.01.T01:three_prime_utr;Parent=MsG0880046403.01.T01
Chr8 three_prime_UTR 72943376 72943689 72943376 ID=MsG0880046403.01.T01:three_prime_utr;Parent=MsG0880046403.01.T01
Gene Sequence

>MsG0880046403.01.T01

ATGTCTCGCATTCTTGATAAGATGTCTGAATTACACCTTTTAGTTTCTACTACTGATTCAAAGATAAGGGACAAGAGAGTGCTAAGGCGTCATCATTTAATCAGGAAGCTGCAAGAAAGGTGCAAATCAATGCATAAGTTACTTTCTGATCATATAAACCGCGAGGAAATAGAAATTTGGCCTATAATTAGAGAATTCTTCTCGAACCGGGAGCAAGGGAAGATCATAGGATGCATACTTGGAAGAATAAGTGCAGAAATATTACAAGATATGATACCTTGGCTAATGGCATCTTTAACACAGGAAGAACAGCATGTTTTAATGTTCTTATGGTCCATGGCTACTAAGAATACAATGTTTGATGAATGGTTAGGTGAATGGTGGAATGGGTACAGTATCTCTAAGGCAGCAGATGGATCAAATGATGCCCCTCTACAGAATGTTGAGCCACTAGAAATTATATCCAAATATTTGTCAGAAGAGGTTCTTAATGCATTACAAGAAGAATCGTCTGCCAACGAAAGCATAAATTTTTTGCAGAAGGATCTTATTGGCAATAACTTTGAGTTCTCCGACAACAATGTTGATGACAATGTTAAGGTTCATAATGCAGCACAAGGTTATAGTCAATGTTCAGAATGCACAAATCATTTTCATGATATTAAGAAAAATGGCTGCAATGAAGTAAAACCAGTGGGCACTATGACAAGTCAGTCTGTTCAACATTTTGATTTTGACAAGTTTGGGCATTATGACAGACTTCTGAAATTGAGTCAAGATGATCTCGAGAAGAAGATCTCTTCTATGGAAGCCAATATCAAAAGCGATGGACAGGAATTCCCTGGGAAACATCCATCTTACAAGGATCCTCATGAACAAATCTATGGTTGCAAACACTACAAGAGGAACTGGAAATTTATCATTGTCCCTATTGCAACTTATGCCGAGTTGGAAAGGGTTTGGGTGTTGACTATTTTCATTGCATGA

Protein sequence

>MsG0880046403.01.T01

MSRILDKMSELHLLVSTTDSKIRDKRVLRRHHLIRKLQERCKSMHKLLSDHINREEIEIWPIIREFFSNREQGKIIGCILGRISAEILQDMIPWLMASLTQEEQHVLMFLWSMATKNTMFDEWLGEWWNGYSISKAADGSNDAPLQNVEPLEIISKYLSEEVLNALQEESSANESINFLQKDLIGNNFEFSDNNVDDNVKVHNAAQGYSQCSECTNHFHDIKKNGCNEVKPVGTMTSQSVQHFDFDKFGHYDRLLKLSQDDLEKKISSMEANIKSDGQEFPGKHPSYKDPHEQIYGCKHYKRNWKFIIVPIATYAELERVWVLTIFIA*