AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080049029.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080049029.01.T01 MTR_2g080290 92.147 191 13 1 11 201 51 239 2.50e-117 333
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080049029.01.T01 AT4G27390 67.143 140 44 2 64 201 96 235 1.19e-65 202

Find 6 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATGGCAGACAAGGATTC+TGG 0.347799 contig619end:+15971 MsG0080049029.01.T01:intron
TGGCAATATGTAATTGTGTA+TGG 0.421381 contig619end:+16092 MsG0080049029.01.T01:exon
TTGCAATTCAGTGAAAGTAT+TGG 0.442103 contig619end:-16120 MsG0080049029.01.T01:intergenic
CTTCAATATTATGTTTGCAT+AGG 0.490899 contig619end:-16195 MsG0080049029.01.T01:intergenic
ATGCAAACATAATATTGAAG+AGG 0.571274 contig619end:+16198 MsG0080049029.01.T01:exon
GTTAATTATACTTACTAACA+TGG 0.625795 contig619end:-16055 MsG0080049028.01.T01:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAAATTCTACATTATT+AGG + contig619end:11520-11539 MsG0080049029.01.T01:intron 10.0%
!!! ATGGTTAAATTTATTTTAAT+GGG - contig619end:10977-10996 MsG0080049029.01.T01:intergenic 10.0%
!!! ATTAACTAGTTTTTTTTTTT+TGG + contig619end:16072-16091 MsG0080049029.01.T01:exon 10.0%
!!! TATGGTTAAATTTATTTTAA+TGG - contig619end:10978-10997 MsG0080049029.01.T01:intergenic 10.0%
!! AAAAATTATTTACATTGAAC+AGG - contig619end:11604-11623 MsG0080049029.01.T01:intergenic 15.0%
!! AAAATATAAGTTTGAAAGTA+TGG - contig619end:13500-13519 MsG0080049029.01.T01:intergenic 15.0%
!! AATAAAGAATAAAGAGATAA+GGG - contig619end:15910-15929 MsG0080049029.01.T01:intergenic 15.0%
!! TAATAAAGAATAAAGAGATA+AGG - contig619end:15911-15930 MsG0080049029.01.T01:intergenic 15.0%
!!! ATATTTTATGAGTTCAATTA+AGG + contig619end:13513-13532 MsG0080049029.01.T01:intron 15.0%
!!! GTTTTAGTAAAGAATAATAA+AGG + contig619end:10633-10652 MsG0080049029.01.T01:CDS 15.0%
!!! TGGTTAAATTTATTTTAATG+GGG - contig619end:10976-10995 MsG0080049029.01.T01:intergenic 15.0%
!! AAAATAAAACTAGCGAAAAT+CGG - contig619end:11878-11897 MsG0080049029.01.T01:intergenic 20.0%
!! AAACATTGAGTAATCATAAT+TGG + contig619end:12739-12758 MsG0080049029.01.T01:intron 20.0%
!! AAAGATTTAAACAAGAACAT+TGG - contig619end:14903-14922 MsG0080049029.01.T01:intergenic 20.0%
!! AACAAAAACATCATTATCAA+CGG - contig619end:14155-14174 MsG0080049029.01.T01:intergenic 20.0%
!! AGAAATGTTTAAACAAACTT+TGG + contig619end:13049-13068 MsG0080049029.01.T01:intron 20.0%
!! AGATACATTTGTATTTAGTT+TGG + contig619end:15164-15183 MsG0080049029.01.T01:intron 20.0%
!! AGATTACATAAACATTTCAT+CGG - contig619end:13662-13681 MsG0080049029.01.T01:intergenic 20.0%
!! ATATAATTCATAAACATCTC+TGG - contig619end:15194-15213 MsG0080049029.01.T01:intergenic 20.0%
!! ATTCAACAATTTCACAAAAA+TGG - contig619end:12487-12506 MsG0080049029.01.T01:intergenic 20.0%
!! GAAATGTTTAAACAAACTTT+GGG + contig619end:13050-13069 MsG0080049029.01.T01:intron 20.0%
!! GTAAAGAATAATAAAGGATT+TGG + contig619end:10639-10658 MsG0080049029.01.T01:CDS 20.0%
!! GTTAAACCATTATAAATACA+AGG + contig619end:10871-10890 MsG0080049029.01.T01:intron 20.0%
!! GTTAATTATACTTACTAACA+TGG - contig619end:16058-16077 MsG0080049029.01.T01:intergenic 20.0%
!! TATCAATAACAATCAATGAA+AGG - contig619end:14611-14630 MsG0080049029.01.T01:intergenic 20.0%
!! TTATACGTATAAAATAACGA+TGG - contig619end:15559-15578 MsG0080049029.01.T01:intergenic 20.0%
!! TTCAACAATTTCACAAAAAT+GGG - contig619end:12486-12505 MsG0080049029.01.T01:intergenic 20.0%
!!! AAATGATGATTTTTGTTGTA+AGG + contig619end:12816-12835 MsG0080049029.01.T01:intron 20.0%
!!! AAATTTCTTGAAAAGTGTTT+CGG + contig619end:13595-13614 MsG0080049029.01.T01:intron 20.0%
!!! AACTTGTTTTACTTAGAAAA+TGG + contig619end:13571-13590 MsG0080049029.01.T01:intron 20.0%
!!! ATATTCTGTTATTTGAGATT+TGG + contig619end:15141-15160 MsG0080049029.01.T01:intron 20.0%
!!! GAATTTACATGTATAAGTTT+TGG - contig619end:11686-11705 MsG0080049029.01.T01:intergenic 20.0%
!!! GTTATTTTTTTAGTGTTTAG+TGG + contig619end:12067-12086 MsG0080049029.01.T01:intron 20.0%
!!! GTTCTTGTTTAAATCTTTTA+CGG + contig619end:14905-14924 MsG0080049029.01.T01:intron 20.0%
!!! GTTGTAATTGTTCTTTTATT+TGG + contig619end:13916-13935 MsG0080049029.01.T01:intron 20.0%
!!! TCACTAACATTAGTTTATAA+AGG - contig619end:12261-12280 MsG0080049029.01.T01:intergenic 20.0%
!!! TCTTTAAAGTGAATAAGTAA+AGG - contig619end:11007-11026 MsG0080049029.01.T01:intergenic 20.0%
!!! TTTAAGGTTGAATTAGAAAT+GGG + contig619end:12194-12213 MsG0080049029.01.T01:intron 20.0%
!!! TTTATTTTGATATCAGTTGA+TGG + contig619end:15749-15768 MsG0080049029.01.T01:intron 20.0%
!!! TTTCTTAAATTATGTTTTCC+CGG + contig619end:11035-11054 MsG0080049029.01.T01:intron 20.0%
!!! TTTTAAGGTTGAATTAGAAA+TGG + contig619end:12193-12212 MsG0080049029.01.T01:intron 20.0%
!!! TTTTATGAATTCATCGTATT+TGG + contig619end:13636-13655 MsG0080049029.01.T01:intron 20.0%
! AAAAGGTAAACCTATTTGAT+TGG - contig619end:11315-11334 MsG0080049029.01.T01:intergenic 25.0%
! AAAGGATTTGGATTCAATAA+TGG + contig619end:10651-10670 MsG0080049029.01.T01:CDS 25.0%
! AAATAAAACTAGCGAAAATC+GGG - contig619end:11877-11896 MsG0080049029.01.T01:intergenic 25.0%
! AAGAAGATAATGTAGATTGA+AGG + contig619end:10144-10163 MsG0080049029.01.T01:exon 25.0%
! AATAAGTAAAGGCTTATCTA+TGG - contig619end:10996-11015 MsG0080049029.01.T01:intergenic 25.0%
! AATTCAACTGCTATAATCAA+CGG - contig619end:14014-14033 MsG0080049029.01.T01:intergenic 25.0%
! AGAAGATAATGTAGATTGAA+GGG + contig619end:10145-10164 MsG0080049029.01.T01:exon 25.0%
! AGAGAAAAAGATGTGAATTA+TGG - contig619end:12460-12479 MsG0080049029.01.T01:intergenic 25.0%
! AGATGAAAAGAACTAAACTT+TGG - contig619end:10501-10520 MsG0080049029.01.T01:intergenic 25.0%
! AGATTGAAAATGATCATTGA+GGG + contig619end:13797-13816 MsG0080049029.01.T01:intron 25.0%
! AGTATTTAAACTATGATGTG+AGG + contig619end:13544-13563 MsG0080049029.01.T01:intron 25.0%
! ATATGTATATGCATATGATG+TGG + contig619end:14487-14506 MsG0080049029.01.T01:intron 25.0%
! ATGCAAACATAATATTGAAG+AGG + contig619end:16198-16217 MsG0080049029.01.T01:exon 25.0%
! ATTATGAGATGATGTATGAA+TGG + contig619end:13858-13877 MsG0080049029.01.T01:intron 25.0%
! ATTCTACAAGGAGTTTAAAA+AGG - contig619end:11332-11351 MsG0080049029.01.T01:intergenic 25.0%
! ATTTAAAAATGGGTGTATGT+GGG + contig619end:10578-10597 MsG0080049029.01.T01:CDS 25.0%
! CATATCAATCTAATCATAGA+GGG - contig619end:13838-13857 MsG0080049029.01.T01:intergenic 25.0%
! CTTCAATATTATGTTTGCAT+AGG - contig619end:16198-16217 MsG0080049029.01.T01:intergenic 25.0%
! GATGAAAAGAACTAAACTTT+GGG - contig619end:10500-10519 MsG0080049029.01.T01:intergenic 25.0%
! GTAAAATCTTAGTGTACTAA+TGG - contig619end:10356-10375 MsG0080049029.01.T01:intergenic 25.0%
! GTCTTGTATATGTTATCATT+GGG - contig619end:10447-10466 MsG0080049029.01.T01:intergenic 25.0%
! TAGAAGACATTATCAACTAA+GGG - contig619end:11646-11665 MsG0080049029.01.T01:intergenic 25.0%
! TAGATAGGTTATGTGAAATT+TGG - contig619end:11405-11424 MsG0080049029.01.T01:intergenic 25.0%
! TAGATTGAAAATGATCATTG+AGG + contig619end:13796-13815 MsG0080049029.01.T01:intron 25.0%
! TATTTAAAAATGGGTGTATG+TGG + contig619end:10577-10596 MsG0080049029.01.T01:CDS 25.0%
! TCAATCTACATTATCTTCTT+TGG - contig619end:10144-10163 MsG0080049029.01.T01:intergenic 25.0%
! TCATATCAATCTAATCATAG+AGG - contig619end:13839-13858 MsG0080049029.01.T01:intergenic 25.0%
! TGTATGAATTGTGGTTTATT+CGG + contig619end:15254-15273 MsG0080049029.01.T01:intron 25.0%
! TGTCTTGTATATGTTATCAT+TGG - contig619end:10448-10467 MsG0080049029.01.T01:intergenic 25.0%
! TTGTGACATAATTGAATATG+TGG + contig619end:14264-14283 MsG0080049029.01.T01:intron 25.0%
! TTTACCGCTTAATAGAAATA+GGG + contig619end:15322-15341 MsG0080049029.01.T01:intron 25.0%
! TTTATAAAGGCTCACTTAAT+GGG - contig619end:12248-12267 MsG0080049029.01.T01:intergenic 25.0%
!! AATGTACTAATAACTTGTGA+AGG - contig619end:15868-15887 MsG0080049029.01.T01:intergenic 25.0%
!! ATTTGTAAAGCATTTACAAG+AGG - contig619end:11067-11086 MsG0080049029.01.T01:intergenic 25.0%
!! TTTGAAGTTTGATGAGAAAT+GGG + contig619end:12791-12810 MsG0080049029.01.T01:intron 25.0%
!! TTTTACCGCTTAATAGAAAT+AGG + contig619end:15321-15340 MsG0080049029.01.T01:intron 25.0%
!!! AAAGTTTAGTTCTTTTCATC+TGG + contig619end:10500-10519 MsG0080049029.01.T01:intron 25.0%
!!! AAGTTTAGTTCTTTTCATCT+GGG + contig619end:10501-10520 MsG0080049029.01.T01:intron 25.0%
!!! ATTTTAGTCATTTTGGACTT+AGG + contig619end:11994-12013 MsG0080049029.01.T01:intron 25.0%
!!! CTTTTACACTTTTTAAACGA+TGG + contig619end:15366-15385 MsG0080049029.01.T01:intron 25.0%
!!! GATGTTTTTGTTACATCATA+AGG + contig619end:14163-14182 MsG0080049029.01.T01:intron 25.0%
!!! GTTCTTTTATTTGGAATGTA+AGG + contig619end:13925-13944 MsG0080049029.01.T01:intron 25.0%
!!! GTTTATTTGACTTGGTATTT+CGG + contig619end:15108-15127 MsG0080049029.01.T01:intron 25.0%
!!! TAATTTTGTTAGCTTTCCAA+TGG + contig619end:13344-13363 MsG0080049029.01.T01:intron 25.0%
!!! TTTACATGTATAAGTTTTGG+AGG - contig619end:11683-11702 MsG0080049029.01.T01:intergenic 25.0%
!!! TTTGACTTGAAAATGATTCT+TGG + contig619end:13373-13392 MsG0080049029.01.T01:intron 25.0%
!!! TTTTAGTCATTTTGGACTTA+GGG + contig619end:11995-12014 MsG0080049029.01.T01:intron 25.0%
!!! TTTTTTAAACGAAACACTGA+TGG - contig619end:15691-15710 MsG0080049029.01.T01:intergenic 25.0%
AAATTGGAGAAAGAAAAGGT+GGG - contig619end:10474-10493 MsG0080049028.01.T01:intergenic 30.0%
AAGTATGGAAACAATCCATA+AGG - contig619end:13485-13504 MsG0080049029.01.T01:intergenic 30.0%
AATGTTAGTGAGAAGAGATA+GGG + contig619end:12270-12289 MsG0080049029.01.T01:intron 30.0%
ACACGAATTTGAAAGCAATT+AGG - contig619end:12514-12533 MsG0080049029.01.T01:intergenic 30.0%
ACATGGGGAATATTGTATAT+GGG - contig619end:10383-10402 MsG0080049029.01.T01:intergenic 30.0%
ACTAAACTTTGGGTCTAAAT+TGG - contig619end:10490-10509 MsG0080049029.01.T01:intergenic 30.0%
ACTGAATAAAGATTAAGCGA+AGG + contig619end:11460-11479 MsG0080049029.01.T01:intron 30.0%
ATAGCTTGAAATGTAAGTGA+TGG + contig619end:14687-14706 MsG0080049029.01.T01:intron 30.0%
ATGAACTTGGAATGATGATA+TGG + contig619end:14792-14811 MsG0080049029.01.T01:intron 30.0%
ATGATATGGAATGGTTTGAA+TGG + contig619end:14806-14825 MsG0080049029.01.T01:intron 30.0%
ATGATGTATGAATGGTTGTT+AGG + contig619end:13866-13885 MsG0080049029.01.T01:intron 30.0%
ATGTTGTTGTGATGAATTGT+TGG + contig619end:12660-12679 MsG0080049029.01.T01:intron 30.0%
ATTAGAAGAATGTTGCAATC+AGG - contig619end:11365-11384 MsG0080049029.01.T01:intergenic 30.0%
CAATTATGAGCCAATCAAAT+AGG + contig619end:11302-11321 MsG0080049029.01.T01:intron 30.0%
CACACACCTTGTATTTATAA+TGG - contig619end:10880-10899 MsG0080049029.01.T01:intergenic 30.0%
CCGGTAAAATATAACACTAT+CGG - contig619end:12156-12175 MsG0080049029.01.T01:intergenic 30.0%
CTACATTATTAGGCTATTTG+TGG + contig619end:11530-11549 MsG0080049029.01.T01:intron 30.0%
CTAGAAGACATTATCAACTA+AGG - contig619end:11647-11666 MsG0080049029.01.T01:intergenic 30.0%
CTGCAATTCTTCATTTAAAG+TGG - contig619end:15597-15616 MsG0080049029.01.T01:intergenic 30.0%
CTTATCTCACAAACCTTAAT+GGG - contig619end:12225-12244 MsG0080049029.01.T01:intergenic 30.0%
CTTTATGCATGTATGAATTG+TGG + contig619end:15245-15264 MsG0080049029.01.T01:intron 30.0%
GTAAATGCTTTACAAATGCA+AGG + contig619end:11070-11089 MsG0080049029.01.T01:intron 30.0%
GTCTAAATTGGAGAAAGAAA+AGG - contig619end:10478-10497 MsG0080049029.01.T01:intergenic 30.0%
GTTGCTACCTCTTAAAATTT+AGG - contig619end:11198-11217 MsG0080049029.01.T01:intergenic 30.0%
GTTTATAAAGGCTCACTTAA+TGG - contig619end:12249-12268 MsG0080049029.01.T01:intergenic 30.0%
TAAATTGGAGAAAGAAAAGG+TGG - contig619end:10475-10494 MsG0080049029.01.T01:intergenic 30.0%
TAATGTTAGTGAGAAGAGAT+AGG + contig619end:12269-12288 MsG0080049029.01.T01:intron 30.0%
TAGCTTGAAATGTAAGTGAT+GGG + contig619end:14688-14707 MsG0080049029.01.T01:intron 30.0%
TCAAACCAATCTACAACATT+TGG + contig619end:15803-15822 MsG0080049029.01.T01:CDS 30.0%
TCGACTTAGAAATAGTTATG+CGG - contig619end:13456-13475 MsG0080049029.01.T01:intergenic 30.0%
TGAAAATCATTTCCACAGTT+TGG - contig619end:15457-15476 MsG0080049029.01.T01:intergenic 30.0%
TGATGCTATTGTTTCCATTT+GGG + contig619end:10782-10801 MsG0080049029.01.T01:CDS 30.0%
TGCATGATGTTTATTTGACT+TGG + contig619end:15100-15119 MsG0080049029.01.T01:intron 30.0%
TGGCAATATGTAATTGTGTA+TGG + contig619end:16092-16111 MsG0080049029.01.T01:exon 30.0%
TGTACTAATGGAGTTAGAAA+AGG - contig619end:10344-10363 MsG0080049029.01.T01:intergenic 30.0%
TGTGTCAAATATCATCTTTG+AGG - contig619end:10268-10287 MsG0080049029.01.T01:intergenic 30.0%
TGTTTCTTGCTTCTTTAGAT+AGG - contig619end:11420-11439 MsG0080049029.01.T01:intergenic 30.0%
TTATCAACGGCTATAATCAA+CGG - contig619end:14142-14161 MsG0080049029.01.T01:intergenic 30.0%
TTATCCCTTATCTTTGTTGA+TGG + contig619end:15928-15947 MsG0080049029.01.T01:intron 30.0%
TTGATGCTATTGTTTCCATT+TGG + contig619end:10781-10800 MsG0080049029.01.T01:CDS 30.0%
TTTGAGAAGATAAGAGATAG+AGG + contig619end:12319-12338 MsG0080049029.01.T01:intron 30.0%
TTTGTTTGTGCTTATACACT+TGG + contig619end:14412-14431 MsG0080049029.01.T01:intron 30.0%
! AAACTGTGGAAATGATTTTC+AGG + contig619end:15456-15475 MsG0080049029.01.T01:CDS 30.0%
! ACATCTCATATCACCATTTT+TGG - contig619end:12644-12663 MsG0080049029.01.T01:intergenic 30.0%
! ATTTTACCAAGTTACTAGAG+AGG + contig619end:12098-12117 MsG0080049029.01.T01:intron 30.0%
! CCGATAGTGTTATATTTTAC+CGG + contig619end:12153-12172 MsG0080049029.01.T01:intron 30.0%
! GAAATTACATGCTTAAGTTG+TGG + contig619end:12593-12612 MsG0080049029.01.T01:intron 30.0%
! GGTGAGTAGTAACATTTTTA+AGG + contig619end:12178-12197 MsG0080049029.01.T01:intron 30.0%
! GTTTGAAGTTTGATGAGAAA+TGG + contig619end:12790-12809 MsG0080049029.01.T01:intron 30.0%
! TACACTTGTTGATATGAACT+TGG + contig619end:14779-14798 MsG0080049029.01.T01:intron 30.0%
! TAGTGTTATATTTTACCGGT+AGG + contig619end:12157-12176 MsG0080049029.01.T01:intron 30.0%
! TTGCAATTCAGTGAAAGTAT+TGG - contig619end:16123-16142 MsG0080049029.01.T01:intergenic 30.0%
! TTTGCATTTTTGCCCAAAAA+TGG + contig619end:12628-12647 MsG0080049029.01.T01:intron 30.0%
! TTTTACCAAGTTACTAGAGA+GGG + contig619end:12099-12118 MsG0080049029.01.T01:intron 30.0%
!! AACACCCTATTTCTATTAAG+CGG - contig619end:15329-15348 MsG0080049029.01.T01:intergenic 30.0%
!! AATTTCTCGCGTTCTAAAAA+TGG + contig619end:15839-15858 MsG0080049029.01.T01:CDS 30.0%
!! ATTTGTGGATTGGTGAAATT+TGG + contig619end:14295-14314 MsG0080049029.01.T01:intron 30.0%
!! CATCTCATATCACCATTTTT+GGG - contig619end:12643-12662 MsG0080049029.01.T01:intergenic 30.0%
!! GATTGGTTTGAAAAATTCAC+AGG - contig619end:15794-15813 MsG0080049029.01.T01:intergenic 30.0%
!! TCAATCTGCGTCTTTTATTT+CGG - contig619end:16017-16036 MsG0080049029.01.T01:intergenic 30.0%
!! TTTAGTCATTTTGGACTTAG+GGG + contig619end:11996-12015 MsG0080049029.01.T01:intron 30.0%
!!! ACGATGGATTATTTTTCTTG+TGG + contig619end:15382-15401 MsG0080049029.01.T01:intron 30.0%
!!! GAAGGGTATTTTAGTCATTT+TGG + contig619end:11987-12006 MsG0080049029.01.T01:intron 30.0%
!!! TTCTGTTTTGAATTGGCTTT+CGG + contig619end:13300-13319 MsG0080049029.01.T01:intron 30.0%
!!! TTCTTGGTTTTTGAGTTATG+AGG + contig619end:13389-13408 MsG0080049029.01.T01:intron 30.0%
AAAAAGGTTGACCGCAAAAT+GGG - contig619end:15625-15644 MsG0080049028.01.T01:intergenic 35.0%
AAAGGTTTAGACATGTCGAA+TGG - contig619end:10326-10345 MsG0080049028.01.T01:intergenic 35.0%
AAATGTTACTACTCACCTAC+CGG - contig619end:12175-12194 MsG0080049028.01.T01:intergenic 35.0%
AAGAATGTTGCAATCAGGAT+AGG - contig619end:11360-11379 MsG0080049029.01.T01:intergenic 35.0%
AATCAACGGCTATAAGTCAA+CGG - contig619end:14000-14019 MsG0080049029.01.T01:intergenic 35.0%
AATGTTGTGATTGTGTGGAT+TGG + contig619end:14320-14339 MsG0080049029.01.T01:intron 35.0%
AATTGTACAAGAGTGGACAT+GGG - contig619end:10399-10418 MsG0080049029.01.T01:intergenic 35.0%
AGAATGTTGCAATCAGGATA+GGG - contig619end:11359-11378 MsG0080049029.01.T01:intergenic 35.0%
AGCACCATCAACAAAGATAA+GGG - contig619end:15935-15954 MsG0080049029.01.T01:intergenic 35.0%
AGCTTGAAATGTAAGTGATG+GGG + contig619end:14689-14708 MsG0080049029.01.T01:intron 35.0%
AGTATGCTAAGTGAAGAATG+AGG + contig619end:14577-14596 MsG0080049029.01.T01:intron 35.0%
ATAGAGGGTTCATAAGCAAT+TGG - contig619end:13823-13842 MsG0080049029.01.T01:intergenic 35.0%
ATTTACAAGAGGCTAATTCC+GGG - contig619end:11056-11075 MsG0080049029.01.T01:intergenic 35.0%
CATTTACAAGAGGCTAATTC+CGG - contig619end:11057-11076 MsG0080049029.01.T01:intergenic 35.0%
CTTGGAATGATGATATGGAA+TGG + contig619end:14797-14816 MsG0080049029.01.T01:intron 35.0%
CTTGTCCAAATGTTGTAGAT+TGG - contig619end:15811-15830 MsG0080049029.01.T01:intergenic 35.0%
GACATGGGGAATATTGTATA+TGG - contig619end:10384-10403 MsG0080049029.01.T01:intergenic 35.0%
GAGGCGCAGTATTTAAAAAT+GGG + contig619end:10568-10587 MsG0080049029.01.T01:CDS 35.0%
GATAGAGAATTGTACAAGAG+TGG - contig619end:10406-10425 MsG0080049029.01.T01:intergenic 35.0%
GCTTATCTCACAAACCTTAA+TGG - contig619end:12226-12245 MsG0080049029.01.T01:intergenic 35.0%
GGAAACAATCCATAAGGTTT+GGG - contig619end:13479-13498 MsG0080049029.01.T01:intergenic 35.0%
GGATTTGGATTCAATAATGG+TGG + contig619end:10654-10673 MsG0080049029.01.T01:CDS 35.0%
TAACACTATCGGTCACTTAA+CGG - contig619end:12145-12164 MsG0080049029.01.T01:intergenic 35.0%
TAGACACTTGCATGAAAAAG+AGG - contig619end:15052-15071 MsG0080049029.01.T01:intergenic 35.0%
TAGGAGCTAAATTGAAGCTT+GGG + contig619end:12392-12411 MsG0080049029.01.T01:intron 35.0%
TATGTGGCTTGATGAATTTG+TGG + contig619end:14280-14299 MsG0080049029.01.T01:intron 35.0%
TCATGCAAGTGTCTAGATTA+GGG + contig619end:15057-15076 MsG0080049029.01.T01:intron 35.0%
TCTATGATAGGGTCATATGA+TGG + contig619end:11102-11121 MsG0080049029.01.T01:intron 35.0%
TGGAAACAATCCATAAGGTT+TGG - contig619end:13480-13499 MsG0080049029.01.T01:intergenic 35.0%
TGGGATCAAATTTGAGCTTT+GGG + contig619end:13069-13088 MsG0080049029.01.T01:intron 35.0%
TGTTGTGAACATATGCATTG+TGG + contig619end:14033-14052 MsG0080049029.01.T01:intron 35.0%
TTCATGCAAGTGTCTAGATT+AGG + contig619end:15056-15075 MsG0080049029.01.T01:intron 35.0%
TTGACTTATCTCTCAATGAC+TGG + contig619end:10741-10760 MsG0080049029.01.T01:CDS 35.0%
TTGGAAAGAACAACATGTGA+AGG + contig619end:10202-10221 MsG0080049029.01.T01:intron 35.0%
TTGGAATGTAAGGAACTATG+TGG + contig619end:13935-13954 MsG0080049029.01.T01:intron 35.0%
TTGGGATCAAATTTGAGCTT+TGG + contig619end:13068-13087 MsG0080049029.01.T01:intron 35.0%
TTGGTGTATATGTACATTGG+TGG + contig619end:14339-14358 MsG0080049029.01.T01:intron 35.0%
TTTGGATTCAATAATGGTGG+AGG + contig619end:10657-10676 MsG0080049029.01.T01:CDS 35.0%
! AAGTCAAAATTGGGGTTTTG+GGG + contig619end:13092-13111 MsG0080049029.01.T01:intron 35.0%
! AAGTGAGTTTTTCTCGTAAC+AGG + contig619end:13120-13139 MsG0080049029.01.T01:intron 35.0%
! GAAGTCAAAATTGGGGTTTT+GGG + contig619end:13091-13110 MsG0080049029.01.T01:intron 35.0%
! GGATTGGTGTATATGTACAT+TGG + contig619end:14336-14355 MsG0080049029.01.T01:intron 35.0%
! GGCTCAACCTAAATTTTAAG+AGG + contig619end:11188-11207 MsG0080049029.01.T01:intron 35.0%
! GGTTGAATTAGAAATGGGTT+AGG + contig619end:12199-12218 MsG0080049029.01.T01:intron 35.0%
! TAATTAGTAAGCACTAGCCT+AGG - contig619end:10832-10851 MsG0080049029.01.T01:intergenic 35.0%
! TCATGCATCATATGTCGTTT+CGG + contig619end:14070-14089 MsG0080049029.01.T01:intron 35.0%
! TGATGGTAATGAGTTTGTCA+AGG + contig619end:15766-15785 MsG0080049029.01.T01:CDS 35.0%
! TTTGCCTCTGTGTGTATTTT+TGG + contig619end:11939-11958 MsG0080049029.01.T01:intron 35.0%
!! AGCTTTGGGAAGTCAAAATT+GGG + contig619end:13083-13102 MsG0080049029.01.T01:intron 35.0%
!! ATATAATGAAAGGCACTGTG+AGG + contig619end:11811-11830 MsG0080049029.01.T01:intron 35.0%
!! ATTTTAATGGGGCAACATCA+GGG - contig619end:10965-10984 MsG0080049029.01.T01:intergenic 35.0%
!! CCTTACAAGTCAGTTTTGTA+CGG + contig619end:11157-11176 MsG0080049029.01.T01:intron 35.0%
!! CTTACAAGTCAGTTTTGTAC+GGG + contig619end:11158-11177 MsG0080049029.01.T01:intron 35.0%
!! TACATTGGTGGATTTGTTGA+TGG + contig619end:14351-14370 MsG0080049029.01.T01:intron 35.0%
!!! CGTTTACTTGGTTTTGACTT+AGG + contig619end:13734-13753 MsG0080049029.01.T01:intron 35.0%
!!! CTCTGTGTGTATTTTTGGTT+GGG + contig619end:11944-11963 MsG0080049029.01.T01:intron 35.0%
!!! TATTTTAATGGGGCAACATC+AGG - contig619end:10966-10985 MsG0080049029.01.T01:intergenic 35.0%
!!! TTTAGTTCTTTTCATCTGGG+TGG + contig619end:10504-10523 MsG0080049029.01.T01:intron 35.0%
AAATTTCACCAAGACCACCT+TGG - contig619end:13423-13442 MsG0080049028.01.T01:intergenic 40.0%
AACCACAGCTTACCAGAAAA+AGG - contig619end:15641-15660 MsG0080049028.01.T01:intergenic 40.0%
AAGATGCAAGAACGTGAAAC+AGG - contig619end:13270-13289 MsG0080049029.01.T01:intergenic 40.0%
AATGTTGCAATCAGGATAGG+GGG - contig619end:11357-11376 MsG0080049029.01.T01:intergenic 40.0%
AGAGAGAAGAACAAGTGCAA+GGG + contig619end:12344-12363 MsG0080049029.01.T01:intron 40.0%
AGATGCAAGAACGTGAAACA+GGG - contig619end:13269-13288 MsG0080049029.01.T01:intergenic 40.0%
ATTGTACAAGAGTGGACATG+GGG - contig619end:10398-10417 MsG0080049029.01.T01:intergenic 40.0%
CAGCACCATCAACAAAGATA+AGG - contig619end:15936-15955 MsG0080049029.01.T01:intergenic 40.0%
CATGTTACACAACATAGCAG+CGG - contig619end:15223-15242 MsG0080049029.01.T01:intergenic 40.0%
CCAACCAAAAATACACACAG+AGG - contig619end:11946-11965 MsG0080049029.01.T01:intergenic 40.0%
CTAGGAGCTAAATTGAAGCT+TGG + contig619end:12391-12410 MsG0080049029.01.T01:intron 40.0%
GAAAAAGGTTGACCGCAAAA+TGG - contig619end:15626-15645 MsG0080049029.01.T01:intergenic 40.0%
GAATGTTGCAATCAGGATAG+GGG - contig619end:11358-11377 MsG0080049029.01.T01:intergenic 40.0%
GAATTGTACAAGAGTGGACA+TGG - contig619end:10400-10419 MsG0080049029.01.T01:intergenic 40.0%
GCAAGTACTCATCATCATCA+AGG - contig619end:14519-14538 MsG0080049029.01.T01:intergenic 40.0%
GCAGGTCGAGATATAATGAA+AGG + contig619end:11801-11820 MsG0080049029.01.T01:CDS 40.0%
GCTTGAAATGTAAGTGATGG+GGG + contig619end:14690-14709 MsG0080049029.01.T01:intron 40.0%
GGCAATTGAACTCGTTTACT+TGG + contig619end:13722-13741 MsG0080049029.01.T01:intron 40.0%
GGCTATAATCAACGGCAATA+TGG - contig619end:14134-14153 MsG0080049029.01.T01:intergenic 40.0%
GGCTTGATGAATTTGTGGAT+TGG + contig619end:14285-14304 MsG0080049029.01.T01:intron 40.0%
GTGTTTCCGTGTTTCGTTTA+TGG + contig619end:15955-15974 MsG0080049029.01.T01:intron 40.0%
GTTATGAGGCAAATACTCCA+AGG + contig619end:13403-13422 MsG0080049029.01.T01:intron 40.0%
TAGACTCTTCTAGATGCATG+TGG - contig619end:14213-14232 MsG0080049029.01.T01:intergenic 40.0%
TAGAGAGAAGAACAAGTGCA+AGG + contig619end:12343-12362 MsG0080049029.01.T01:intron 40.0%
TATATGCAGTGTCCAAACTG+TGG + contig619end:15442-15461 MsG0080049029.01.T01:intron 40.0%
TATTCCCACACAGATCTTTG+CGG + contig619end:11737-11756 MsG0080049029.01.T01:intron 40.0%
TCAAGTCAAACCAAAGCCAT+TGG - contig619end:13363-13382 MsG0080049029.01.T01:intergenic 40.0%
TCATGTGATGCTAGTGTTCT+AGG + contig619end:14723-14742 MsG0080049029.01.T01:intron 40.0%
TGAACGTTAACACAGCAGTA+AGG - contig619end:11227-11246 MsG0080049029.01.T01:intergenic 40.0%
TGGCAAATGTTCGTTGGATT+TGG + contig619end:10183-10202 MsG0080049029.01.T01:exon 40.0%
TGGTGAATGTTGTGATTGTG+TGG + contig619end:14315-14334 MsG0080049029.01.T01:intron 40.0%
TGGTTGGGAATCGTAGAATT+CGG + contig619end:11959-11978 MsG0080049029.01.T01:intron 40.0%
TGTCTGCCATAAACGAAACA+CGG - contig619end:15964-15983 MsG0080049029.01.T01:intergenic 40.0%
TGTTGCAAGATGATAGCAAG+AGG - contig619end:11251-11270 MsG0080049029.01.T01:intergenic 40.0%
TGTTTCGTTTATGGCAGACA+AGG + contig619end:15964-15983 MsG0080049029.01.T01:intron 40.0%
TTTATGGCAGACAAGGATTC+TGG + contig619end:15971-15990 MsG0080049029.01.T01:intron 40.0%
! AAAGCACCAAGACCTACTAT+CGG - contig619end:11771-11790 MsG0080049029.01.T01:intergenic 40.0%
! AAGCTTGGGTTAGAGAATCT+TGG + contig619end:12406-12425 MsG0080049029.01.T01:intron 40.0%
! AGGCAAGGAATGTCTTTTTC+AGG - contig619end:11140-11159 MsG0080049029.01.T01:intergenic 40.0%
! GGAAGTCAAAATTGGGGTTT+TGG + contig619end:13090-13109 MsG0080049029.01.T01:intron 40.0%
! GGAGGCGCAGTATTTAAAAA+TGG + contig619end:10567-10586 MsG0080049029.01.T01:CDS 40.0%
! TTTTGCGGTCAACCTTTTTC+TGG + contig619end:15626-15645 MsG0080049029.01.T01:CDS 40.0%
!! AACCTTTTTCTGGTAAGCTG+TGG + contig619end:15636-15655 MsG0080049029.01.T01:intron 40.0%
!! CAAAACTGACTTGTAAGGCA+AGG - contig619end:11155-11174 MsG0080049029.01.T01:intergenic 40.0%
!! CAGTTTTGTACGGGTGAATA+AGG + contig619end:11167-11186 MsG0080049029.01.T01:intron 40.0%
!! CCGTACAAAACTGACTTGTA+AGG - contig619end:11160-11179 MsG0080049029.01.T01:intergenic 40.0%
!! CGCTCGTTTCTGTTTTGAAT+TGG + contig619end:13293-13312 MsG0080049029.01.T01:intron 40.0%
!! CGTAGAATTCGGTGTTAGAA+GGG + contig619end:11970-11989 MsG0080049029.01.T01:intron 40.0%
!! GAGCTTTGGGAAGTCAAAAT+TGG + contig619end:13082-13101 MsG0080049029.01.T01:intron 40.0%
!! GATTTTGGGAAATCTTGCTC+TGG + contig619end:10710-10729 MsG0080049029.01.T01:CDS 40.0%
!! GCTTTGGGAAGTCAAAATTG+GGG + contig619end:13084-13103 MsG0080049029.01.T01:intron 40.0%
!! GGGCATTTTGGTCATTTTGA+GGG + contig619end:12016-12035 MsG0080049029.01.T01:intron 40.0%
!! TCGTAGAATTCGGTGTTAGA+AGG + contig619end:11969-11988 MsG0080049029.01.T01:intron 40.0%
!! TGTTAGCTTTCCAATGGCTT+TGG + contig619end:13350-13369 MsG0080049029.01.T01:intron 40.0%
!! TTAGAGAATCTTGGTGCTAG+AGG + contig619end:12415-12434 MsG0080049029.01.T01:intron 40.0%
!! TTAGTACCGATAGTAGGTCT+TGG + contig619end:11762-11781 MsG0080049029.01.T01:CDS 40.0%
!! TTTCAAGTTGAGAGCATGCA+GGG + contig619end:10527-10546 MsG0080049029.01.T01:intron 40.0%
!!! CATTTGCCACGTTGGTTTTA+AGG - contig619end:10172-10191 MsG0080049029.01.T01:intergenic 40.0%
!!! CCTCTGTGTGTATTTTTGGT+TGG + contig619end:11943-11962 MsG0080049029.01.T01:intron 40.0%
!!! TTTTGGACTTAGGGGCATTT+TGG + contig619end:12004-12023 MsG0080049029.01.T01:intron 40.0%
AAAAGAGGAACTCCACTCCT+CGG - contig619end:15037-15056 MsG0080049028.01.T01:intergenic 45.0%
AACACCGCAAAGATCTGTGT+GGG - contig619end:11744-11763 MsG0080049028.01.T01:intergenic 45.0%
AAGGGTCCTTAAAACCAACG+TGG + contig619end:10163-10182 MsG0080049029.01.T01:exon 45.0%
ACATCATAAGGTGACGACCT+TGG + contig619end:14175-14194 MsG0080049029.01.T01:intron 45.0%
AGAACAAGTGCAAGGGTTAG+AGG + contig619end:12351-12370 MsG0080049029.01.T01:intron 45.0%
AGGTAAGACGCGTCTATGAT+AGG + contig619end:11090-11109 MsG0080049029.01.T01:intron 45.0%
ATGAGGCAAATACTCCAAGG+TGG + contig619end:13406-13425 MsG0080049029.01.T01:intron 45.0%
CAAATACTCCAAGGTGGTCT+TGG + contig619end:13412-13431 MsG0080049029.01.T01:intron 45.0%
CTAAGTCGACCCAAACCTTA+TGG + contig619end:13467-13486 MsG0080049029.01.T01:intron 45.0%
CTACACCCTCTCTAGTAACT+TGG - contig619end:12107-12126 MsG0080049029.01.T01:intergenic 45.0%
CTCTCAATGACTGGACAACT+TGG + contig619end:10750-10769 MsG0080049029.01.T01:CDS 45.0%
CTTGAGAGGATACATGGCAT+AGG + contig619end:13701-13720 MsG0080049029.01.T01:intron 45.0%
GATGCAAGAACGTGAAACAG+GGG - contig619end:13268-13287 MsG0080049029.01.T01:intergenic 45.0%
GATGTAATGCTAACCCTCAG+TGG + contig619end:14936-14955 MsG0080049029.01.T01:intron 45.0%
GCAAGAGGGATTCATCATCT+AGG + contig619end:12373-12392 MsG0080049029.01.T01:intron 45.0%
GCACATATGTGTGACTTGAG+AGG + contig619end:13687-13706 MsG0080049029.01.T01:intron 45.0%
GGGTGTATGTGGGAAGAAAA+GGG + contig619end:10588-10607 MsG0080049029.01.T01:CDS 45.0%
GGTAAGACGCGTCTATGATA+GGG + contig619end:11091-11110 MsG0080049029.01.T01:intron 45.0%
GGTGTATGTGGGAAGAAAAG+GGG + contig619end:10589-10608 MsG0080049029.01.T01:CDS 45.0%
GTGTGACTTGAGAGGATACA+TGG + contig619end:13695-13714 MsG0080049029.01.T01:intron 45.0%
TAACACAGCAGTAAGGTTGC+TGG - contig619end:11220-11239 MsG0080049029.01.T01:intergenic 45.0%
TAACACCGCAAAGATCTGTG+TGG - contig619end:11745-11764 MsG0080049029.01.T01:intergenic 45.0%
TCTCTCTCTCTTGGTTTCCT+AGG + contig619end:10812-10831 MsG0080049029.01.T01:intron 45.0%
TCTCTGTATGGATGGGTAGA+CGG + contig619end:14979-14998 MsG0080049029.01.T01:intron 45.0%
TGGGTGTATGTGGGAAGAAA+AGG + contig619end:10587-10606 MsG0080049029.01.T01:CDS 45.0%
! CTAGATTAGGGCTCTGATCT+AGG + contig619end:15069-15088 MsG0080049029.01.T01:intron 45.0%
! GGATTCAATAATGGTGGAGG+TGG + contig619end:10660-10679 MsG0080049029.01.T01:CDS 45.0%
! GGTAGCACTGCTAGGATTTT+GGG + contig619end:10696-10715 MsG0080049029.01.T01:CDS 45.0%
! TGGTAGCACTGCTAGGATTT+TGG + contig619end:10695-10714 MsG0080049029.01.T01:CDS 45.0%
! TGTGATGCTAGTGTTCTAGG+AGG + contig619end:14726-14745 MsG0080049029.01.T01:intron 45.0%
! TTCAATAATGGTGGAGGTGG+TGG + contig619end:10663-10682 MsG0080049029.01.T01:CDS 45.0%
! TTGCAGTTGTGCCCATTTTG+CGG + contig619end:15611-15630 MsG0080049029.01.T01:CDS 45.0%
!! AGAGAGAGAGAGTACCCAAA+TGG - contig619end:10799-10818 MsG0080049029.01.T01:intergenic 45.0%
!! ATCTTGGTGCTAGAGGTAAG+AGG + contig619end:12422-12441 MsG0080049029.01.T01:intron 45.0%
!! GAAATGGGTTAGGCCCATTA+AGG + contig619end:12209-12228 MsG0080049029.01.T01:intron 45.0%
!! GGGGCATTTTGGTCATTTTG+AGG + contig619end:12015-12034 MsG0080049029.01.T01:intron 45.0%
!! GTGATGCTAGTGTTCTAGGA+GGG + contig619end:14727-14746 MsG0080049029.01.T01:intron 45.0%
!! GTTTCAAGTTGAGAGCATGC+AGG + contig619end:10526-10545 MsG0080049029.01.T01:intron 45.0%
!! TCTTGGTGCTAGAGGTAAGA+GGG + contig619end:12423-12442 MsG0080049029.01.T01:intron 45.0%
!! TTTGGTCATTTTGAGGGCAG+TGG + contig619end:12022-12041 MsG0080049029.01.T01:intron 45.0%
!!! AGGGAGAGGTGCTCTTTTTT+GGG + contig619end:10546-10565 MsG0080049029.01.T01:intron 45.0%
ACCCATCCATACAGAGAGGT+AGG - contig619end:14976-14995 MsG0080049029.01.T01:intergenic 50.0%
CAATGACTGGACAACTTGGC+TGG + contig619end:10754-10773 MsG0080049029.01.T01:CDS 50.0%
CATCCATACAGAGAGGTAGG+CGG - contig619end:14973-14992 MsG0080049029.01.T01:intergenic 50.0%
CCAACGAACATTTGCCACGT+TGG - contig619end:10180-10199 MsG0080049029.01.T01:intergenic 50.0%
CCAACGTGGCAAATGTTCGT+TGG + contig619end:10177-10196 MsG0080049029.01.T01:exon 50.0%
GAAATCTTGCTCTGGCTGCT+GGG + contig619end:10718-10737 MsG0080049029.01.T01:CDS 50.0%
GCCTACCTCTCTGTATGGAT+GGG + contig619end:14972-14991 MsG0080049029.01.T01:intron 50.0%
GCGAGTAGATTTACTCGCCA+CGG + contig619end:13221-13240 MsG0080049029.01.T01:intron 50.0%
GGATAGGGGGAGATTCTACA+AGG - contig619end:11344-11363 MsG0080049029.01.T01:intergenic 50.0%
GGTACTCTCTCTCTCTCTCT+TGG + contig619end:10803-10822 MsG0080049029.01.T01:intron 50.0%
GTCTACCCATCCATACAGAG+AGG - contig619end:14980-14999 MsG0080049029.01.T01:intergenic 50.0%
GTGCAAGAGGGAAAAGAGAG+TGG + contig619end:10611-10630 MsG0080049029.01.T01:CDS 50.0%
TCATAAGGTGACGACCTTGG+AGG + contig619end:14178-14197 MsG0080049029.01.T01:intron 50.0%
TGCAAGGGTTAGAGGCAAGA+GGG + contig619end:12359-12378 MsG0080049029.01.T01:intron 50.0%
TGTGGTACCAAACTCCTCCA+AGG - contig619end:14195-14214 MsG0080049029.01.T01:intergenic 50.0%
! GAGATGATGGTAGCACTGCT+AGG + contig619end:10688-10707 MsG0080049029.01.T01:CDS 50.0%
! GGAAGAAAAGGGGTGCAAGA+GGG + contig619end:10599-10618 MsG0080049029.01.T01:CDS 50.0%
! GTTGTTGCTTGTTGATGCCG+AGG + contig619end:15017-15036 MsG0080049029.01.T01:intron 50.0%
!! ATGCTAGTGTTCTAGGAGGG+AGG + contig619end:14730-14749 MsG0080049029.01.T01:intron 50.0%
!! GCGGTGTTAGTACCGATAGT+AGG + contig619end:11756-11775 MsG0080049029.01.T01:CDS 50.0%
!! TAGGTCTTGGTGCTTTCCTC+TGG + contig619end:11775-11794 MsG0080049029.01.T01:CDS 50.0%
!! TCTTGGTGCTTTCCTCTGGT+GGG + contig619end:11779-11798 MsG0080049029.01.T01:CDS 50.0%
!! TGCTAGTGTTCTAGGAGGGA+GGG + contig619end:14731-14750 MsG0080049029.01.T01:intron 50.0%
!!! CAGGGAGAGGTGCTCTTTTT+TGG + contig619end:10545-10564 MsG0080049029.01.T01:intron 50.0%
!!! GAGAGGTGCTCTTTTTTGGG+AGG + contig619end:10549-10568 MsG0080049029.01.T01:CDS 50.0%
CGCCTACCTCTCTGTATGGA+TGG + contig619end:14971-14990 MsG0080049029.01.T01:intron 55.0%
GGAAATCTTGCTCTGGCTGC+TGG + contig619end:10717-10736 MsG0080049029.01.T01:CDS 55.0%
GGCGAGTAAATCTACTCGCG+AGG - contig619end:13220-13239 MsG0080049029.01.T01:intergenic 55.0%
GTGACGACCTTGGAGGAGTT+TGG + contig619end:14185-14204 MsG0080049029.01.T01:intron 55.0%
GTGCAAGGGTTAGAGGCAAG+AGG + contig619end:12358-12377 MsG0080049029.01.T01:intron 55.0%
TAACCCTCAGTGGTCTGTGG+TGG + contig619end:14946-14965 MsG0080049029.01.T01:intron 55.0%
TGCTAACCCTCAGTGGTCTG+TGG + contig619end:14943-14962 MsG0080049029.01.T01:intron 55.0%
! AGTTGAGAGCATGCAGGGAG+AGG + contig619end:10532-10551 MsG0080049029.01.T01:intron 55.0%
! GGGAAGAAAAGGGGTGCAAG+AGG + contig619end:10598-10617 MsG0080049029.01.T01:CDS 55.0%
! TGCTTGTTGATGCCGAGGAG+TGG + contig619end:15022-15041 MsG0080049029.01.T01:intron 55.0%
!! GGAGGTGGTGGAAGAGATGA+TGG + contig619end:10675-10694 MsG0080049029.01.T01:CDS 55.0%
!! GTCTTGGTGCTTTCCTCTGG+TGG + contig619end:11778-11797 MsG0080049029.01.T01:CDS 55.0%
GGACCGCCTACCTCTCTGTA+TGG + contig619end:14967-14986 MsG0080049029.01.T01:intron 60.0%
GGTCCACCACAGACCACTGA+GGG - contig619end:14952-14971 MsG0080049029.01.T01:intergenic 60.0%
TATCTCGACCTGCCCACCAG+AGG - contig619end:11794-11813 MsG0080049029.01.T01:intergenic 60.0%
!!! AGGCGAGCAGGAGGTGCTTT+TGG + contig619end:13182-13201 MsG0080049029.01.T01:intron 60.0%
AACTCGCCACAGCGAGTGGG+AGG + contig619end:13151-13170 MsG0080049029.01.T01:intron 65.0%
AACTCGCCTCCCACTCGCTG+TGG - contig619end:13160-13179 MsG0080049029.01.T01:intergenic 65.0%
ACAGCGAGTGGGAGGCGAGT+TGG + contig619end:13159-13178 MsG0080049029.01.T01:intron 65.0%
CCCAACTCGCCACAGCGAGT+GGG + contig619end:13148-13167 MsG0080049029.01.T01:intron 65.0%
CCCACTCGCTGTGGCGAGTT+GGG - contig619end:13151-13170 MsG0080049029.01.T01:intergenic 65.0%
CGGTCCACCACAGACCACTG+AGG - contig619end:14953-14972 MsG0080049029.01.T01:intergenic 65.0%
TCCCAACTCGCCACAGCGAG+TGG + contig619end:13147-13166 MsG0080049029.01.T01:intron 65.0%
TCCCACTCGCTGTGGCGAGT+TGG - contig619end:13152-13171 MsG0080049029.01.T01:intergenic 65.0%
TGGATGGGTAGACGGCGTGC+AGG + contig619end:14987-15006 MsG0080049029.01.T01:intron 65.0%
TGTCACTGTGCAGCTCGCCG+TGG - contig619end:13241-13260 MsG0080049029.01.T01:intergenic 65.0%
! GGTGCTTTCCTCTGGTGGGC+AGG + contig619end:11783-11802 MsG0080049029.01.T01:CDS 65.0%
! GAGGCGAGTTGGAGGCGAGC+AGG + contig619end:13170-13189 MsG0080049029.01.T01:intron 70.0%
! GCGAGTGGGAGGCGAGTTGG+AGG + contig619end:13162-13181 MsG0080049029.01.T01:intron 70.0%
! GCGAGTTGGAGGCGAGCAGG+AGG + contig619end:13173-13192 MsG0080049029.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
contig619end gene 10116 16240 10116 ID=MsG0080049029.01;
contig619end mRNA 10116 16240 10116 ID=MsG0080049029.01.T01;Parent=MsG0080049029.01
contig619end exon 10116 10217 10116 ID=MsG0080049029.01.T01.exon;Parent=MsG0080049029.01.T01
contig619end CDS 10189 10217 10189 ID=MsG0080049029.01.T01.cds;Parent=MsG0080049029.01.T01
contig619end CDS 10548 10803 10548 ID=MsG0080049029.01.T01.cds;Parent=MsG0080049029.01.T01
contig619end exon 10548 10803 10548 ID=MsG0080049029.01.T01.exon;Parent=MsG0080049029.01.T01
contig619end CDS 11750 11827 11750 ID=MsG0080049029.01.T01.cds;Parent=MsG0080049029.01.T01
contig619end exon 11750 11827 11750 ID=MsG0080049029.01.T01.exon;Parent=MsG0080049029.01.T01
contig619end CDS 15451 15485 15451 ID=MsG0080049029.01.T01.cds;Parent=MsG0080049029.01.T01
contig619end exon 15451 15485 15451 ID=MsG0080049029.01.T01.exon;Parent=MsG0080049029.01.T01
contig619end CDS 15592 15647 15592 ID=MsG0080049029.01.T01.cds;Parent=MsG0080049029.01.T01
contig619end exon 15592 15647 15592 ID=MsG0080049029.01.T01.exon;Parent=MsG0080049029.01.T01
contig619end CDS 15765 15860 15765 ID=MsG0080049029.01.T01.cds;Parent=MsG0080049029.01.T01
contig619end exon 15765 15860 15765 ID=MsG0080049029.01.T01.exon;Parent=MsG0080049029.01.T01
contig619end CDS 15981 16036 15981 ID=MsG0080049029.01.T01.cds;Parent=MsG0080049029.01.T01
contig619end exon 15981 16240 15981 ID=MsG0080049029.01.T01.exon;Parent=MsG0080049029.01.T01
Gene Sequence

>MsG0080049029.01.T01

ATGTTCGTTGGATTTGGAAAGAACAACATGGAGAGGTGCTCTTTTTTGGGAGGCGCAGTATTTAAAAATGGGTGTATGTGGGAAGAAAAGGGGTGCAAGAGGGAAAAGAGAGTGGTTTTAGTAAAGAATAATAAAGGATTTGGATTCAATAATGGTGGAGGTGGTGGAAGAGATGATGGTAGCACTGCTAGGATTTTGGGAAATCTTGCTCTGGCTGCTGGGTTGACTTATCTCTCAATGACTGGACAACTTGGCTGGATAATTGATGCTATTGTTTCCATTTGGATCTTTGCGGTGTTAGTACCGATAGTAGGTCTTGGTGCTTTCCTCTGGTGGGCAGGTCGAGATATAATGAAAGGCACTTGTCCAAACTGTGGAAATGATTTTCAGGTTTTCAAATCCACTTTAAATGAAGAATTGCAGTTGTGCCCATTTTGCGGTCAACCTTTTTCTGTTGATGGTAATGAGTTTGTCAAGGAACCTGTGAATTTTTCAAACCAATCTACAACATTTGGACAAGCATTCGACAATTTCTCGCGTTCTAAAAATGACAAGGATTCTGGTAGAGCAATTGATGTTGAAGCCGAAATAAAAGACGCAGATTGA

Protein sequence

>MsG0080049029.01.T01

MFVGFGKNNMERCSFLGGAVFKNGCMWEEKGCKREKRVVLVKNNKGFGFNNGGGGGRDDGSTARILGNLALAAGLTYLSMTGQLGWIIDAIVSIWIFAVLVPIVGLGAFLWWAGRDIMKGTCPNCGNDFQVFKSTLNEELQLCPFCGQPFSVDGNEFVKEPVNFSNQSTTFGQAFDNFSRSKNDKDSGRAIDVEAEIKDAD*