AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010417.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010417.01.T01 MTR_2g083870 95.785 261 11 0 1 261 1 261 2.31e-170 471
MsG0280010417.01.T01 MTR_8g087000 53.171 205 66 7 50 247 45 226 2.74e-60 191
MsG0280010417.01.T01 MTR_8g087000 52.709 203 66 7 52 247 48 227 6.19e-59 187
MsG0280010417.01.T01 MTR_2g016770 51.244 201 75 6 48 245 8 188 7.04e-57 181
MsG0280010417.01.T01 MTR_2g016770 51.010 198 74 6 51 245 3 180 7.19e-56 178
MsG0280010417.01.T01 MTR_2g032030 61.386 101 38 1 50 150 238 337 1.61e-35 131
MsG0280010417.01.T01 MTR_2g032030 61.386 101 38 1 50 150 238 337 3.33e-35 131
MsG0280010417.01.T01 MTR_7g079040 54.206 107 38 1 44 150 129 224 3.74e-32 120
MsG0280010417.01.T01 MTR_8g087000 46.753 154 53 6 100 247 35 165 7.84e-32 116
MsG0280010417.01.T01 MTR_7g109600 50.000 132 48 5 50 180 25 139 1.82e-31 117
MsG0280010417.01.T01 MTR_5g016610 47.788 113 43 2 39 146 164 265 1.88e-28 109
MsG0280010417.01.T01 MTR_8g028565 50.962 104 40 1 47 150 133 225 7.36e-28 109
MsG0280010417.01.T01 MTR_8g098945 61.905 84 31 1 81 163 130 213 4.22e-27 106
MsG0280010417.01.T01 MTR_4g094908 58.242 91 31 3 50 139 241 325 5.30e-27 107
MsG0280010417.01.T01 MTR_4g127040 54.255 94 27 2 50 138 221 303 1.13e-26 105
MsG0280010417.01.T01 MTR_1g009613 55.556 90 34 2 50 139 238 321 1.32e-26 106
MsG0280010417.01.T01 MTR_1g099600 44.915 118 55 1 40 157 155 262 2.11e-26 105
MsG0280010417.01.T01 MTR_1g070455 52.174 92 28 2 52 138 271 351 2.75e-24 100
MsG0280010417.01.T01 MTR_3g108960 42.500 120 56 2 21 138 264 372 1.67e-23 98.6
MsG0280010417.01.T01 MTR_0117s0040 64.407 59 21 0 79 137 73 131 2.32e-22 92.8
MsG0280010417.01.T01 MTR_2g024350 59.677 62 25 0 79 140 7 68 8.80e-22 90.9
MsG0280010417.01.T01 MTR_2g024380 59.677 62 25 0 79 140 250 311 4.74e-21 92.0
MsG0280010417.01.T01 MTR_7g110720 42.276 123 56 3 38 160 156 263 7.07e-20 88.6
MsG0280010417.01.T01 MTR_7g110720 42.276 123 56 3 38 160 183 290 7.25e-20 88.6
MsG0280010417.01.T01 MTR_8g069935 41.667 120 62 3 41 160 299 410 9.69e-20 88.2
MsG0280010417.01.T01 MTR_3g053330 46.512 86 46 0 71 156 242 327 1.49e-19 87.8
MsG0280010417.01.T01 MTR_4g049790 42.553 94 54 0 71 164 303 396 3.63e-19 87.0
MsG0280010417.01.T01 MTR_2g023930 54.286 70 32 0 71 140 296 365 1.50e-18 85.1
MsG0280010417.01.T01 MTR_4g094588 45.745 94 47 3 81 174 179 268 1.72e-18 84.0
MsG0280010417.01.T01 MTR_4g049760 41.489 94 55 0 71 164 281 374 2.60e-18 84.3
MsG0280010417.01.T01 MTR_2g088000 51.429 70 34 0 71 140 340 409 7.10e-18 83.2
MsG0280010417.01.T01 MTR_7g011820 35.119 168 85 6 13 160 327 490 7.39e-18 83.2
MsG0280010417.01.T01 MTR_7g011820 40.217 92 50 3 78 166 226 315 1.05e-11 64.7
MsG0280010417.01.T01 MTR_4g094412 52.113 71 34 0 71 141 225 295 7.45e-18 82.8
MsG0280010417.01.T01 MTR_4g094412 52.113 71 34 0 71 141 234 304 8.43e-18 82.8
MsG0280010417.01.T01 MTR_4g132430 36.111 144 81 4 4 140 48 187 9.43e-18 82.0
MsG0280010417.01.T01 MTR_4g132430 37.008 127 62 3 18 140 209 321 1.10e-17 82.4
MsG0280010417.01.T01 MTR_4g107970 52.113 71 34 0 71 141 169 239 1.71e-17 82.0
MsG0280010417.01.T01 MTR_4g107970 52.113 71 34 0 71 141 246 316 2.04e-17 82.0
MsG0280010417.01.T01 MTR_8g067635 58.333 60 25 0 81 140 350 409 2.43e-17 81.6
MsG0280010417.01.T01 MTR_7g100510 57.377 61 25 1 81 141 362 421 3.01e-17 80.9
MsG0280010417.01.T01 MTR_7g100510 45.946 74 38 2 78 151 187 258 1.57e-13 70.1
MsG0280010417.01.T01 MTR_4g082580 38.095 105 55 2 41 145 248 342 3.24e-17 80.9
MsG0280010417.01.T01 MTR_4g082580 35.632 87 55 1 81 167 146 231 2.71e-11 63.5
MsG0280010417.01.T01 MTR_5g042920 42.857 84 47 1 81 164 321 403 3.38e-17 80.9
MsG0280010417.01.T01 MTR_5g042920 48.485 66 32 2 78 143 149 212 1.53e-13 70.1
MsG0280010417.01.T01 MTR_5g091390 56.667 60 25 1 81 140 158 216 7.55e-17 79.0
MsG0280010417.01.T01 MTR_4g130900 38.889 108 60 3 44 146 318 424 7.56e-17 80.1
MsG0280010417.01.T01 MTR_5g043880 39.024 123 65 4 37 154 85 202 1.21e-16 77.8
MsG0280010417.01.T01 MTR_5g094430 50.000 64 31 1 81 144 231 293 1.25e-16 79.3
MsG0280010417.01.T01 MTR_5g094430 50.000 64 31 1 81 144 253 315 1.30e-16 79.3
MsG0280010417.01.T01 MTR_5g094430 50.000 64 31 1 81 144 365 427 1.45e-16 79.3
MsG0280010417.01.T01 MTR_7g009730 44.048 84 47 0 71 154 210 293 2.36e-16 78.6
MsG0280010417.01.T01 MTR_2g045360 55.000 60 27 0 81 140 212 271 2.61e-16 78.2
MsG0280010417.01.T01 MTR_3g056100 32.418 182 106 8 12 179 197 375 2.70e-16 78.2
MsG0280010417.01.T01 MTR_8g067650 56.667 60 26 0 81 140 340 399 3.27e-16 78.2
MsG0280010417.01.T01 MTR_3g056100 35.374 147 85 7 12 151 341 484 3.44e-16 78.2
MsG0280010417.01.T01 MTR_3g056100 38.679 106 56 3 81 179 259 362 3.67e-16 77.8
MsG0280010417.01.T01 MTR_3g056100 47.887 71 35 2 81 151 403 471 4.19e-16 78.2
MsG0280010417.01.T01 MTR_7g080020 34.848 132 76 4 81 207 494 620 4.31e-16 78.2
MsG0280010417.01.T01 MTR_7g080020 50.000 60 28 2 81 140 281 338 2.31e-11 63.9
MsG0280010417.01.T01 MTR_4g047580 38.835 103 58 2 71 170 272 372 8.32e-16 77.0
MsG0280010417.01.T01 MTR_6g053200 48.529 68 35 0 81 148 331 398 9.18e-16 77.0
MsG0280010417.01.T01 MTR_3g106060 42.045 88 46 1 81 163 139 226 1.04e-15 75.5
MsG0280010417.01.T01 MTR_3g009470 40.698 86 46 2 81 166 496 576 2.73e-15 75.9
MsG0280010417.01.T01 MTR_3g009470 43.333 90 48 3 78 167 278 364 9.17e-14 71.2
MsG0280010417.01.T01 MTR_1g013760 52.632 57 27 0 81 137 141 197 3.03e-15 73.9
MsG0280010417.01.T01 MTR_1g077780 36.975 119 54 4 41 145 17 128 3.38e-15 71.2
MsG0280010417.01.T01 MTR_7g109800 35.965 114 55 3 81 194 146 241 3.79e-15 73.9
MsG0280010417.01.T01 MTR_6g086555 52.381 63 28 2 80 141 206 267 5.75e-15 74.3
MsG0280010417.01.T01 MTR_8g092010 42.683 82 45 2 71 152 99 178 5.78e-15 71.6
MsG0280010417.01.T01 MTR_7g062220 57.895 57 23 1 81 137 125 180 7.29e-15 73.6
MsG0280010417.01.T01 MTR_1g086790 50.877 57 27 1 81 137 159 214 1.20e-14 72.8
MsG0280010417.01.T01 MTR_3g031220 49.206 63 31 1 81 143 366 427 1.29e-14 73.6
MsG0280010417.01.T01 MTR_3g095040 31.967 122 74 2 51 172 89 201 1.63e-14 70.9
MsG0280010417.01.T01 MTR_4g013260 49.206 63 31 1 81 143 337 398 2.10e-14 72.8
MsG0280010417.01.T01 MTR_7g080000 33.333 132 72 3 81 208 433 552 3.19e-14 72.4
MsG0280010417.01.T01 MTR_7g080000 51.667 60 27 2 81 140 235 292 2.90e-12 66.6
MsG0280010417.01.T01 MTR_5g097490 50.820 61 29 1 80 140 252 311 3.95e-14 71.6
MsG0280010417.01.T01 MTR_4g122530 42.254 71 40 1 71 141 199 268 5.39e-14 71.6
MsG0280010417.01.T01 MTR_5g067680 39.394 99 51 3 51 145 178 271 5.42e-14 71.2
MsG0280010417.01.T01 MTR_3g009470 43.333 90 48 3 78 167 278 364 6.81e-14 71.2
MsG0280010417.01.T01 MTR_7g117200 45.455 88 42 3 50 135 92 175 7.08e-14 70.5
MsG0280010417.01.T01 MTR_3g104750 45.333 75 36 2 71 145 95 164 7.37e-14 68.2
MsG0280010417.01.T01 MTR_3g090860 38.532 109 53 3 33 135 90 190 8.80e-14 70.5
MsG0280010417.01.T01 MTR_5g074400 36.154 130 57 5 17 143 376 482 1.04e-13 70.9
MsG0280010417.01.T01 MTR_4g007060 48.333 60 31 0 81 140 129 188 1.11e-13 69.7
MsG0280010417.01.T01 MTR_4g007060 48.333 60 31 0 81 140 163 222 1.22e-13 69.7
MsG0280010417.01.T01 MTR_1g013790 43.939 66 37 0 75 140 96 161 1.71e-13 68.9
MsG0280010417.01.T01 MTR_1g015140 37.736 106 54 3 34 137 63 158 1.82e-13 67.0
MsG0280010417.01.T01 MTR_2g105060 46.667 60 32 0 81 140 95 154 5.25e-13 67.0
MsG0280010417.01.T01 MTR_2g033820 48.333 60 30 1 81 140 204 262 5.62e-13 68.2
MsG0280010417.01.T01 MTR_2g105060 47.368 57 30 0 81 137 170 226 7.01e-13 67.8
MsG0280010417.01.T01 MTR_7g071120 46.032 63 33 1 81 143 325 386 1.05e-12 67.8
MsG0280010417.01.T01 MTR_7g028415 32.000 125 79 3 23 144 33 154 2.11e-12 64.3
MsG0280010417.01.T01 MTR_7g028710 32.000 125 79 3 23 144 33 154 2.11e-12 64.3
MsG0280010417.01.T01 MTR_8g099350 33.613 119 69 2 27 135 71 189 3.74e-12 65.9
MsG0280010417.01.T01 MTR_1g078260 55.172 58 24 2 81 137 248 304 3.80e-12 66.2
MsG0280010417.01.T01 MTR_7g079010 49.123 57 28 1 81 137 142 197 4.36e-12 64.3
MsG0280010417.01.T01 MTR_8g027860 35.514 107 54 4 46 140 100 203 7.07e-12 65.1
MsG0280010417.01.T01 MTR_5g073620 37.168 113 58 5 40 142 629 738 1.11e-11 65.1
MsG0280010417.01.T01 MTR_7g109600 44.444 81 31 3 100 180 7 73 1.29e-11 62.4
MsG0280010417.01.T01 MTR_8g007270 39.286 84 49 2 71 154 145 226 1.44e-11 62.8
MsG0280010417.01.T01 MTR_8g092140 46.552 58 30 1 81 138 161 217 1.98e-11 62.8
MsG0280010417.01.T01 MTR_3g095080 46.552 58 30 1 81 138 169 225 3.49e-11 62.0
MsG0280010417.01.T01 MTR_3g095080 46.552 58 30 1 81 138 145 201 3.72e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010417.01.T01 AT3G58710 51.172 256 85 7 26 256 16 256 1.93e-74 228
MsG0280010417.01.T01 AT3G58710 50.973 257 85 8 26 256 16 257 1.25e-72 223
MsG0280010417.01.T01 AT1G29280 47.303 241 104 6 26 249 15 249 2.39e-61 194
MsG0280010417.01.T01 AT2G34830 47.368 171 69 5 37 188 178 346 4.21e-37 136
MsG0280010417.01.T01 AT2G34830 47.368 171 69 5 37 188 169 337 4.79e-37 135
MsG0280010417.01.T01 AT1G30650 64.211 95 33 1 50 144 188 281 1.74e-35 131
MsG0280010417.01.T01 AT4G01250 45.926 135 58 2 21 150 74 198 3.25e-29 112
MsG0280010417.01.T01 AT5G45050 42.759 145 63 3 43 175 1123 1259 4.42e-29 116
MsG0280010417.01.T01 AT5G45050 42.759 145 63 3 43 175 1151 1287 4.48e-29 116
MsG0280010417.01.T01 AT5G45050 42.759 145 63 3 43 175 1012 1148 6.83e-29 115
MsG0280010417.01.T01 AT5G52830 49.600 125 47 3 80 191 165 286 7.65e-28 109
MsG0280010417.01.T01 AT4G23550 66.197 71 24 0 80 150 140 210 9.30e-28 108
MsG0280010417.01.T01 AT4G24240 53.608 97 29 2 50 141 257 342 4.91e-27 107
MsG0280010417.01.T01 AT2G23320 54.444 90 35 2 50 139 216 299 1.05e-26 105
MsG0280010417.01.T01 AT2G30590 53.763 93 27 2 50 137 289 370 8.27e-26 104
MsG0280010417.01.T01 AT4G31550 53.191 94 28 2 50 138 221 303 1.69e-25 102
MsG0280010417.01.T01 AT4G31550 52.128 94 29 2 50 138 222 304 1.00e-24 100
MsG0280010417.01.T01 AT5G28650 52.577 97 30 2 50 141 238 323 2.11e-24 100
MsG0280010417.01.T01 AT3G04670 52.577 97 30 2 50 141 238 323 3.17e-24 99.8
MsG0280010417.01.T01 AT2G24570 49.505 101 35 2 50 145 219 308 3.18e-24 99.4
MsG0280010417.01.T01 AT5G45260 42.520 127 53 5 37 155 1171 1285 7.57e-22 95.1
MsG0280010417.01.T01 AT4G30935 38.596 114 62 3 39 146 285 396 1.05e-20 91.3
MsG0280010417.01.T01 AT4G04450 46.809 94 50 0 71 164 189 282 4.93e-20 89.0
MsG0280010417.01.T01 AT4G04450 46.809 94 50 0 71 164 283 376 7.72e-20 89.0
MsG0280010417.01.T01 AT5G15130 48.810 84 43 0 71 154 218 301 2.84e-19 87.4
MsG0280010417.01.T01 AT5G15130 48.810 84 43 0 71 154 176 259 3.00e-19 87.0
MsG0280010417.01.T01 AT1G68150 46.988 83 44 0 71 153 226 308 8.58e-19 85.1
MsG0280010417.01.T01 AT4G22070 52.857 70 33 0 71 140 288 357 1.83e-18 85.1
MsG0280010417.01.T01 AT4G22070 52.857 70 33 0 71 140 288 357 1.83e-18 85.1
MsG0280010417.01.T01 AT4G22070 52.857 70 33 0 71 140 288 357 1.83e-18 85.1
MsG0280010417.01.T01 AT4G22070 52.857 70 33 0 71 140 288 357 1.83e-18 85.1
MsG0280010417.01.T01 AT1G62300 36.957 138 67 3 3 140 255 372 2.43e-18 84.7
MsG0280010417.01.T01 AT2G04880 59.016 61 24 1 80 140 283 342 5.23e-18 83.6
MsG0280010417.01.T01 AT2G04880 59.016 61 24 1 80 140 307 366 5.34e-18 83.6
MsG0280010417.01.T01 AT5G26170 51.471 68 32 1 71 138 104 170 7.20e-18 79.3
MsG0280010417.01.T01 AT5G46350 47.619 84 38 2 81 164 184 261 7.26e-18 82.0
MsG0280010417.01.T01 AT2G37260 40.952 105 56 2 37 141 231 329 8.18e-18 82.0
MsG0280010417.01.T01 AT2G37260 48.649 74 33 3 81 151 86 157 2.66e-12 66.2
MsG0280010417.01.T01 AT2G37260 40.952 105 56 2 37 141 311 409 9.32e-18 82.4
MsG0280010417.01.T01 AT2G37260 48.649 74 33 3 81 151 166 237 1.97e-12 67.0
MsG0280010417.01.T01 AT2G37260 40.952 105 56 2 37 141 229 327 9.50e-18 82.0
MsG0280010417.01.T01 AT2G37260 48.649 74 33 3 81 151 84 155 3.10e-12 66.2
MsG0280010417.01.T01 AT1G13960 38.281 128 59 4 13 140 208 315 3.25e-17 80.5
MsG0280010417.01.T01 AT1G13960 49.206 63 30 2 78 140 74 134 5.05e-13 68.6
MsG0280010417.01.T01 AT1G13960 38.281 128 59 4 13 140 361 468 3.78e-17 80.9
MsG0280010417.01.T01 AT1G13960 49.206 63 30 2 78 140 227 287 6.82e-13 68.6
MsG0280010417.01.T01 AT4G01720 51.429 70 34 0 71 140 230 299 4.07e-17 80.9
MsG0280010417.01.T01 AT4G18170 56.667 60 25 1 81 140 173 231 5.23e-17 79.3
MsG0280010417.01.T01 AT3G62340 42.222 90 45 2 52 141 96 178 5.68e-17 79.0
MsG0280010417.01.T01 AT1G69810 47.368 76 39 1 80 154 203 278 1.29e-16 79.0
MsG0280010417.01.T01 AT1G69810 47.368 76 39 1 80 154 145 220 1.59e-16 78.2
MsG0280010417.01.T01 AT1G18860 52.857 70 33 0 71 140 230 299 1.69e-16 79.3
MsG0280010417.01.T01 AT1G29860 55.000 60 26 1 81 140 137 195 1.85e-16 77.4
MsG0280010417.01.T01 AT5G49520 51.515 66 30 2 81 145 222 286 2.59e-16 78.2
MsG0280010417.01.T01 AT4G26640 32.759 116 67 2 81 186 206 320 3.57e-16 77.8
MsG0280010417.01.T01 AT4G26640 32.759 116 67 2 81 186 206 320 3.57e-16 77.8
MsG0280010417.01.T01 AT4G26640 32.759 116 67 2 81 186 206 320 3.57e-16 77.8
MsG0280010417.01.T01 AT4G26640 32.759 116 67 2 81 186 206 320 3.57e-16 77.8
MsG0280010417.01.T01 AT4G26640 32.759 116 67 2 81 186 310 424 7.27e-16 77.0
MsG0280010417.01.T01 AT4G26640 32.759 116 67 2 81 186 382 496 9.45e-16 77.0
MsG0280010417.01.T01 AT4G26640 32.759 116 67 2 81 186 342 456 1.03e-15 76.6
MsG0280010417.01.T01 AT2G03340 34.228 149 79 6 11 144 334 478 1.10e-15 76.6
MsG0280010417.01.T01 AT2G03340 43.056 72 39 2 78 149 248 317 3.51e-13 69.3
MsG0280010417.01.T01 AT5G07100 49.206 63 31 1 81 143 142 203 1.34e-15 73.9
MsG0280010417.01.T01 AT5G07100 30.435 138 88 2 62 192 6 142 6.97e-12 63.5
MsG0280010417.01.T01 AT5G07100 49.206 63 31 1 81 143 142 203 1.34e-15 73.9
MsG0280010417.01.T01 AT5G07100 30.435 138 88 2 62 192 6 142 6.97e-12 63.5
MsG0280010417.01.T01 AT5G07100 49.206 63 31 1 81 143 142 203 1.34e-15 73.9
MsG0280010417.01.T01 AT5G07100 30.435 138 88 2 62 192 6 142 6.97e-12 63.5
MsG0280010417.01.T01 AT5G07100 49.206 63 31 1 81 143 142 203 1.34e-15 73.9
MsG0280010417.01.T01 AT5G07100 30.435 138 88 2 62 192 6 142 6.97e-12 63.5
MsG0280010417.01.T01 AT4G31800 42.857 77 44 0 81 157 112 188 2.58e-15 73.6
MsG0280010417.01.T01 AT5G07100 49.206 63 31 1 81 143 235 296 2.85e-15 74.3
MsG0280010417.01.T01 AT5G07100 30.435 138 88 2 62 192 99 235 3.67e-11 62.8
MsG0280010417.01.T01 AT2G40740 37.719 114 63 3 50 158 146 256 2.98e-15 74.3
MsG0280010417.01.T01 AT2G40740 37.719 114 63 3 50 158 155 265 3.42e-15 74.3
MsG0280010417.01.T01 AT2G47260 35.354 99 54 2 43 141 146 234 4.12e-15 74.3
MsG0280010417.01.T01 AT4G31800 42.857 77 44 0 81 157 177 253 4.93e-15 73.9
MsG0280010417.01.T01 AT4G11070 36.429 140 77 5 16 143 37 176 8.07e-15 72.8
MsG0280010417.01.T01 AT2G38470 49.206 63 31 1 81 143 363 424 9.32e-15 73.9
MsG0280010417.01.T01 AT4G11070 32.418 182 107 7 16 181 69 250 9.80e-15 73.2
MsG0280010417.01.T01 AT1G69310 37.113 97 51 2 41 137 117 203 1.08e-14 72.8
MsG0280010417.01.T01 AT1G69310 37.113 97 51 2 41 137 117 203 1.08e-14 72.8
MsG0280010417.01.T01 AT1G69310 37.113 97 51 2 41 137 117 203 1.08e-14 72.8
MsG0280010417.01.T01 AT2G25000 50.000 60 30 0 81 140 104 163 1.43e-14 71.2
MsG0280010417.01.T01 AT2G25000 50.000 60 30 0 81 140 104 163 1.43e-14 71.2
MsG0280010417.01.T01 AT2G21900 38.261 115 63 3 27 140 61 168 1.51e-14 70.9
MsG0280010417.01.T01 AT2G25000 50.000 60 30 0 81 140 126 185 2.16e-14 71.2
MsG0280010417.01.T01 AT2G30250 43.373 83 37 2 58 140 315 387 2.94e-14 72.4
MsG0280010417.01.T01 AT2G25000 50.000 60 30 0 81 140 147 206 3.16e-14 71.2
MsG0280010417.01.T01 AT3G01080 39.796 98 51 3 47 140 310 403 3.80e-14 72.0
MsG0280010417.01.T01 AT3G01080 49.206 63 30 2 78 140 203 263 2.50e-12 66.6
MsG0280010417.01.T01 AT3G01080 39.796 98 51 3 47 140 272 365 4.09e-14 72.0
MsG0280010417.01.T01 AT3G01080 49.206 63 30 2 78 140 165 225 2.75e-12 66.6
MsG0280010417.01.T01 AT5G56270 47.619 63 32 1 81 143 488 549 4.87e-14 72.0
MsG0280010417.01.T01 AT5G56270 46.970 66 33 2 78 143 271 334 1.42e-11 64.7
MsG0280010417.01.T01 AT1G80840 37.273 110 64 3 32 140 101 206 1.69e-13 69.3
MsG0280010417.01.T01 AT4G26440 32.479 117 69 2 46 162 347 453 1.73e-13 70.5
MsG0280010417.01.T01 AT4G26440 48.485 66 32 2 78 143 176 239 6.77e-12 65.5
MsG0280010417.01.T01 AT5G13080 41.892 74 40 2 71 144 58 128 6.10e-13 65.1
MsG0280010417.01.T01 AT4G23810 41.237 97 50 2 50 144 133 224 9.43e-13 67.4
MsG0280010417.01.T01 AT3G01970 38.272 81 47 2 71 149 56 135 1.09e-12 64.3
MsG0280010417.01.T01 AT3G01080 49.206 63 30 2 78 140 203 263 2.00e-12 66.6
MsG0280010417.01.T01 AT5G24110 30.201 149 81 4 24 168 63 192 3.50e-12 65.5
MsG0280010417.01.T01 AT2G46400 30.921 152 88 5 81 221 105 250 5.04e-12 65.1
MsG0280010417.01.T01 AT3G56400 31.081 148 66 6 25 146 57 194 5.46e-12 65.1
MsG0280010417.01.T01 AT1G64000 47.368 57 29 1 81 137 115 170 6.34e-12 63.5
MsG0280010417.01.T01 AT2G46130 47.368 57 29 1 81 137 31 86 1.91e-11 60.1
MsG0280010417.01.T01 AT5G41570 47.368 57 29 1 81 137 99 154 2.46e-11 61.6
MsG0280010417.01.T01 AT1G66560 44.444 72 38 1 66 135 89 160 3.11e-11 62.4
MsG0280010417.01.T01 AT5G64810 45.614 57 30 1 81 137 111 166 3.50e-11 61.2
MsG0280010417.01.T01 AT5G43290 50.877 57 27 1 81 137 115 170 4.46e-11 62.0
MsG0280010417.01.T01 AT2G44745 47.368 57 29 1 81 137 146 201 4.49e-11 61.2
MsG0280010417.01.T01 AT4G39410 44.118 68 37 1 71 138 214 280 5.26e-11 62.0
MsG0280010417.01.T01 AT1G55600 43.548 62 34 1 79 140 306 366 7.13e-11 62.4
MsG0280010417.01.T01 AT4G12020 39.744 78 44 3 80 157 468 542 8.44e-11 62.8
MsG0280010417.01.T01 AT4G12020 39.744 78 44 3 80 157 468 542 8.92e-11 62.4
MsG0280010417.01.T01 AT4G12020 39.744 78 44 3 80 157 468 542 9.37e-11 62.4
MsG0280010417.01.T01 AT4G12020 39.744 78 44 3 80 157 468 542 9.37e-11 62.4
MsG0280010417.01.T01 AT4G12020 39.744 78 44 3 80 157 468 542 9.82e-11 62.4
MsG0280010417.01.T01 AT4G12020 39.744 78 44 3 80 157 468 542 9.88e-11 62.4
MsG0280010417.01.T01 AT4G12020 39.744 78 44 3 80 157 468 542 9.97e-11 62.4

Find 123 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAATGGTGATAAGAAAAT+TGG 0.180419 2:+69235315 None:intergenic
GTGGAAGAATGATGAGATTT+TGG 0.195561 2:+69230427 None:intergenic
CGTTTGTACATGATTGCTTA+TGG 0.213795 2:+69235247 None:intergenic
TTTCAGTATAGCGGCATTAC+AGG 0.325170 2:-69230091 MsG0280010417.01.T01:CDS
TCAGCATTATCAATTGAATT+AGG 0.330295 2:-69230043 MsG0280010417.01.T01:three_prime_UTR
AGGGGTGGCCGGAGTGGTGG+TGG 0.330811 2:+69235358 None:intergenic
GGCGATCACAACGCCGTGTT+TGG 0.338656 2:-69230280 MsG0280010417.01.T01:CDS
TAAGTTTATGTTACAGATCA+TGG 0.341030 2:-69229910 MsG0280010417.01.T01:three_prime_UTR
CTCGAGCTTGAGCTCAGGCT+CGG 0.342839 2:+69235180 None:intergenic
GCGAAAACGGGCCGATCTTC+CGG 0.342902 2:+69230328 None:intergenic
GGCCGGAGTGGTGGTGGTGG+TGG 0.353977 2:+69235364 None:intergenic
TGCCGATCTCGGAGAGTTGC+CGG 0.372131 2:-69230155 MsG0280010417.01.T01:CDS
GGAGGGAGTGGTTGTGTTCA+TGG 0.377427 2:+69230455 None:intergenic
TGGATAAGGGGAGCCTTTGA+TGG 0.379797 2:+69234748 None:intergenic
GTACAAAACAAGAAAACTAT+TGG 0.381215 2:+69229798 None:intergenic
CATATCCACCGTCGGATTCA+TGG 0.384899 2:-69234796 MsG0280010417.01.T01:CDS
CCACCCCTCTCTTCGTCTTC+CGG 0.396348 2:-69235343 MsG0280010417.01.T01:five_prime_UTR
AAATTATAGTACCTTGGATA+AGG 0.397051 2:+69234734 None:intergenic
AATTATAGTACCTTGGATAA+GGG 0.403232 2:+69234735 None:intergenic
GGTGGCCGGAGTGGTGGTGG+TGG 0.404335 2:+69235361 None:intergenic
GTCGGGATGAGTGGCGAAAA+CGG 0.412803 2:+69230315 None:intergenic
AGCAGGCCCCGCTTCTGAGA+TGG 0.433634 2:+69235156 None:intergenic
CACCGTCGGATTCATGGGCT+TGG 0.434014 2:-69234790 MsG0280010417.01.T01:CDS
TCCTCTACTCCGCCGCATAT+CGG 0.434523 2:+69230217 None:intergenic
TAGGTTACGAGGAGGTTTGT+GGG 0.435902 2:+69230481 None:intergenic
CATTGTGATTATAATATTCA+CGG 0.435971 2:-69229988 MsG0280010417.01.T01:three_prime_UTR
TCCTTCTCCCGGCGAGTCTC+CGG 0.439306 2:-69230365 MsG0280010417.01.T01:CDS
GATCCTTCCACGTCAGCAAT+TGG 0.441186 2:+69234836 None:intergenic
TCGAGCTTGAGCTCAGGCTC+GGG 0.444741 2:+69235181 None:intergenic
ATAAATAATTAATTATTAGC+AGG 0.447156 2:-69229850 MsG0280010417.01.T01:three_prime_UTR
AGCTGTGACGGTGGCGGTGA+CGG 0.450157 2:+69230399 None:intergenic
CTCGAGCCCATCTCAGAAGC+GGG 0.454610 2:-69235163 MsG0280010417.01.T01:CDS
TCGGGATGAGTGGCGAAAAC+GGG 0.459881 2:+69230316 None:intergenic
GAAATGGTGATAAGAAAATT+GGG 0.460441 2:+69235316 None:intergenic
TCACAAGAAGAGGGAGAAGC+AGG 0.462868 2:+69235139 None:intergenic
GCAGGCCCCGCTTCTGAGAT+GGG 0.464707 2:+69235157 None:intergenic
TCCGGCTGCCACTCCTCAGC+CGG 0.468481 2:-69230347 MsG0280010417.01.T01:CDS
GTAGGTTACGAGGAGGTTTG+TGG 0.474952 2:+69230480 None:intergenic
TGCTTAATTAGTGTAGGAAA+TGG 0.475634 2:+69235300 None:intergenic
GGATAAGGGGAGCCTTTGAT+GGG 0.479551 2:+69234749 None:intergenic
GAGAGGGGTGGCCGGAGTGG+TGG 0.480749 2:+69235355 None:intergenic
GACGGTGGCGGTGACGGCAG+TGG 0.492089 2:+69230405 None:intergenic
CCGCTATACTGAAACACACT+TGG 0.499608 2:+69230100 None:intergenic
TCCGGCTGAGGAGTGGCAGC+CGG 0.500132 2:+69230346 None:intergenic
ATATCCACCGTCGGATTCAT+GGG 0.503432 2:-69234795 MsG0280010417.01.T01:CDS
TACCGATGTAGTAGTTCAAA+AGG 0.506115 2:-69230544 MsG0280010417.01.T01:CDS
ATGGGCTCGAGCTTGAGCTC+AGG 0.506629 2:+69235175 None:intergenic
GCCGGAGACTCGCCGGGAGA+AGG 0.506970 2:+69230364 None:intergenic
AAGACGAAGAGAGGGGTGGC+CGG 0.507176 2:+69235347 None:intergenic
AAGAACCATCACCCAAGAAA+AGG 0.507877 2:-69235102 MsG0280010417.01.T01:intron
TCCGATATGCGGCGGAGTAG+AGG 0.508135 2:-69230218 MsG0280010417.01.T01:CDS
ACGGGCCGATCTTCCGGCTG+AGG 0.512946 2:+69230334 None:intergenic
GAGGGAGTGGTTGTGTTCAT+GGG 0.513550 2:+69230456 None:intergenic
GAGCCGTTGTTTGCCGATCT+CGG 0.514966 2:-69230166 MsG0280010417.01.T01:CDS
ATCACAACGCCGTGTTTGGA+TGG 0.519613 2:-69230276 MsG0280010417.01.T01:CDS
TTTAGTGTCTTCACAAGAAG+AGG 0.522076 2:+69235129 None:intergenic
AGTGGCAGCCGGAGACTCGC+CGG 0.523423 2:+69230357 None:intergenic
GAAGAGAGGGGTGGCCGGAG+TGG 0.525696 2:+69235352 None:intergenic
TTCGATGATGTTGTATCCAC+CGG 0.526361 2:-69230253 MsG0280010417.01.T01:CDS
TTGAAGTGCTTAATTAGTGT+AGG 0.526988 2:+69235294 None:intergenic
CCACTCCTCAGCCGGAAGAT+CGG 0.530292 2:-69230339 MsG0280010417.01.T01:CDS
GCTCAGGCTCGGGCTCATCT+CGG 0.538319 2:+69235191 None:intergenic
GGTGGCGGTGACGGCAGTGG+TGG 0.541648 2:+69230408 None:intergenic
CACTTGGAATATTTCTCTGT+CGG 0.542054 2:+69230116 None:intergenic
GTCGACGGCAGCTGTGACGG+TGG 0.545751 2:+69230390 None:intergenic
GTGGTGGTGGTGATGAGGAG+AGG 0.547281 2:+69235377 None:intergenic
AGATTGAGAGAGATTAAGAG+AGG 0.549413 2:+69235406 None:intergenic
AGTGTCGACGGCAGCTGTGA+CGG 0.553848 2:+69230387 None:intergenic
ACTAATTAAGCACTTCAAAG+AGG 0.559790 2:-69235289 MsG0280010417.01.T01:five_prime_UTR
GTGGCAGCCGGAGACTCGCC+GGG 0.561605 2:+69230358 None:intergenic
TACGGTCAAAAGCCCATCAA+AGG 0.561969 2:-69234761 MsG0280010417.01.T01:CDS
GTGGTTGTGTTCATGGGCGT+AGG 0.562233 2:+69230462 None:intergenic
TCATGGGCTTGGAGAAAGTA+CGG 0.563892 2:-69234779 MsG0280010417.01.T01:CDS
ATACCAATTGCTGACGTGGA+AGG 0.566426 2:-69234839 MsG0280010417.01.T01:CDS
ATTATAGTACCTTGGATAAG+GGG 0.571387 2:+69234736 None:intergenic
ATAGGAGGGAGATGAAGAAG+AGG 0.573853 2:-69234871 MsG0280010417.01.T01:intron
CTCGCCGGAAGACGAAGAGA+GGG 0.574547 2:+69235339 None:intergenic
GCTCGCCGGAAGACGAAGAG+AGG 0.575625 2:+69235338 None:intergenic
AGAGTTGCCGGAGTGTTCAA+CGG 0.576289 2:-69230143 MsG0280010417.01.T01:CDS
CTCCGGCAACTCTCCGAGAT+CGG 0.577094 2:+69230153 None:intergenic
TCGCCGGTGAGGTCAAAGTC+GGG 0.577492 2:+69230298 None:intergenic
CCAAGTGTGTTTCAGTATAG+CGG 0.578263 2:-69230100 MsG0280010417.01.T01:CDS
CCGATCTTCCGGCTGAGGAG+TGG 0.579167 2:+69230339 None:intergenic
GAGGGAGATGAAGAAGAGGG+TGG 0.583069 2:-69234867 MsG0280010417.01.T01:CDS
CGGAAAACCGTTGAACACTC+CGG 0.588243 2:+69230136 None:intergenic
ATCGCCGGTGAGGTCAAAGT+CGG 0.588374 2:+69230297 None:intergenic
AAACACGGCGTTGTGATCGC+CGG 0.589318 2:+69230282 None:intergenic
CTCCAAGCCCATGAATCCGA+CGG 0.591645 2:+69234788 None:intergenic
GAGGTCAAAGTCGGGATGAG+TGG 0.592534 2:+69230306 None:intergenic
TTAGTGTCTTCACAAGAAGA+GGG 0.596042 2:+69235130 None:intergenic
GATAAGAAAATTGGGCTCGC+CGG 0.597941 2:+69235324 None:intergenic
GCCGTCGACACTCCTTCTCC+CGG 0.599041 2:-69230376 MsG0280010417.01.T01:CDS
GACTATACCAATTGCTGACG+TGG 0.603395 2:-69234843 MsG0280010417.01.T01:CDS
GCTCGAGCCCATCTCAGAAG+CGG 0.603968 2:-69235164 MsG0280010417.01.T01:CDS
GGAGGTTTGTGGGGTCCACA+CGG 0.607061 2:+69230491 None:intergenic
GTGGAAGGATCTAAGAGTAG+AGG 0.612807 2:-69234824 MsG0280010417.01.T01:CDS
GTTCATGGGCGTAGGTTACG+AGG 0.614339 2:+69230470 None:intergenic
TCAAAGGCTCCCCTTATCCA+AGG 0.621296 2:-69234745 MsG0280010417.01.T01:intron
GACGGCAGCTGTGACGGTGG+CGG 0.623123 2:+69230393 None:intergenic
CTGTTTAATATGAGCCGCCA+TGG 0.626609 2:+69235439 None:intergenic
TCGAGCCCATCTCAGAAGCG+GGG 0.626614 2:-69235162 MsG0280010417.01.T01:CDS
GCCGGGAGAAGGAGTGTCGA+CGG 0.631416 2:+69230375 None:intergenic
TAGGAGGGAGATGAAGAAGA+GGG 0.638622 2:-69234870 MsG0280010417.01.T01:CDS
AGGTTACGAGGAGGTTTGTG+GGG 0.641192 2:+69230482 None:intergenic
CTCGTAAGTCCGATATGCGG+CGG 0.641711 2:-69230226 MsG0280010417.01.T01:CDS
TCGCCGGAAGACGAAGAGAG+GGG 0.641917 2:+69235340 None:intergenic
CCGGAAGACGAAGAGAGGGG+TGG 0.642562 2:+69235343 None:intergenic
CGGCGTTGTGATCGCCGGTG+AGG 0.644184 2:+69230287 None:intergenic
GACGTTGACGATGCGAGAGG+AGG 0.647457 2:-69230191 MsG0280010417.01.T01:CDS
CATGGGCGTAGGTTACGAGG+AGG 0.653568 2:+69230473 None:intergenic
ATCATCGAACCATCCAAACA+CGG 0.655214 2:+69230267 None:intergenic
AGGAGAGACATATCCACCGT+CGG 0.668578 2:-69234804 MsG0280010417.01.T01:CDS
CGGACTTACGAGAACTCCGG+TGG 0.673877 2:+69230237 None:intergenic
TATCGGACTTACGAGAACTC+CGG 0.686902 2:+69230234 None:intergenic
GTTCTCGTAAGTCCGATATG+CGG 0.693669 2:-69230229 MsG0280010417.01.T01:CDS
TGTGACGTTGACGATGCGAG+AGG 0.696998 2:-69230194 MsG0280010417.01.T01:CDS
TTCACGGCCTGAAAATCGTG+CGG 0.702805 2:-69229972 MsG0280010417.01.T01:three_prime_UTR
ACAAGTCGAAAGAAGCCGTG+TGG 0.703821 2:-69230506 MsG0280010417.01.T01:CDS
CATCCCGACTTTGACCTCAC+CGG 0.711873 2:-69230301 MsG0280010417.01.T01:CDS
CAAGCCCATGAATCCGACGG+TGG 0.711911 2:+69234791 None:intergenic
TCTCCGAGATCGGCAAACAA+CGG 0.712350 2:+69230163 None:intergenic
TCTCGGTCAGCAACATACAG+TGG 0.713476 2:+69235208 None:intergenic
TTGCCAATCTGTCACCATGG+CGG 0.732195 2:-69235453 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAATTATAAACTCAAT+TGG + Chr2:69231368-69231387 None:intergenic 10.0%
!! ATAAATAATTAATTATTAGC+AGG - Chr2:69235381-69235400 MsG0280010417.01.T01:five_prime_UTR 10.0%
!! ATTACAAAATTAAAAATCAT+AGG - Chr2:69231597-69231616 MsG0280010417.01.T01:intron 10.0%
!! TCTTAATAAATTATTCTTTA+AGG + Chr2:69234270-69234289 None:intergenic 10.0%
!!! AAAAATCATTTTGTTTAAAT+TGG + Chr2:69230271-69230290 None:intergenic 10.0%
!!! AGGTTTTTTATTTTTAAAAA+AGG + Chr2:69232686-69232705 None:intergenic 10.0%
!!! TATTTCTACTTTTTATTTTT+TGG - Chr2:69233480-69233499 MsG0280010417.01.T01:intron 10.0%
!!! TTAAATTTTTTCCATTTTTA+TGG - Chr2:69230169-69230188 MsG0280010417.01.T01:CDS 10.0%
!!! TTTATTTTTATTGAAAAACA+TGG - Chr2:69233803-69233822 MsG0280010417.01.T01:intron 10.0%
!!! TTTTAATTTTTAATTTTTCC+GGG + Chr2:69231469-69231488 None:intergenic 10.0%
!!! TTTTTTAAACAATTTTTCAA+CGG - Chr2:69231671-69231690 MsG0280010417.01.T01:intron 10.0%
!! AAACAAAAATATCAAGTATA+TGG - Chr2:69234472-69234491 MsG0280010417.01.T01:intron 15.0%
!! AATTTATTAAGAAAATTGAG+AGG - Chr2:69234278-69234297 MsG0280010417.01.T01:intron 15.0%
!! ATTAAAAAATTAACGACTAT+AGG - Chr2:69231482-69231501 MsG0280010417.01.T01:intron 15.0%
!! TAAACTTCATCTTAATTAAT+TGG - Chr2:69230548-69230567 MsG0280010417.01.T01:CDS 15.0%
!! TTTACTACTACTATAAATTA+CGG + Chr2:69231865-69231884 None:intergenic 15.0%
!!! AAATACTCACATTTTTTTTA+AGG - Chr2:69234417-69234436 MsG0280010417.01.T01:intron 15.0%
!!! AAGAATGATAAATATAGTTT+TGG - Chr2:69230654-69230673 MsG0280010417.01.T01:intron 15.0%
!!! ATTTAAAATTGTACAATATG+AGG + Chr2:69234618-69234637 None:intergenic 15.0%
!!! ATTTTTTTAACTATTGTTTG+AGG + Chr2:69233523-69233542 None:intergenic 15.0%
!!! GTTTTTAAACTATTTTTCAA+CGG - Chr2:69231632-69231651 MsG0280010417.01.T01:intron 15.0%
!!! TATGAGAATATTTTAAACAA+TGG + Chr2:69234026-69234045 None:intergenic 15.0%
!!! TTAATTTTATCCTAAAACTT+CGG - Chr2:69233327-69233346 MsG0280010417.01.T01:intron 15.0%
!!! TTTTTCATCAAATAATTTAG+TGG + Chr2:69231241-69231260 None:intergenic 15.0%
!!! TTTTTTTAACTATTGTTTGA+GGG + Chr2:69233522-69233541 None:intergenic 15.0%
!! AAAATTGTTTAAAAAACCGT+CGG + Chr2:69231667-69231686 None:intergenic 20.0%
!! ACTTTATAAGGTGAATAAAT+GGG + Chr2:69231110-69231129 None:intergenic 20.0%
!! ATCCAATCATATCTTAATTA+GGG - Chr2:69233984-69234003 MsG0280010417.01.T01:intron 20.0%
!! ATTGTGATATATAAAGATTG+AGG - Chr2:69231166-69231185 MsG0280010417.01.T01:intron 20.0%
!! CATGAAACAAATAAAAAACA+CGG - Chr2:69233681-69233700 MsG0280010417.01.T01:intron 20.0%
!! CATTGTGATTATAATATTCA+CGG - Chr2:69235243-69235262 MsG0280010417.01.T01:exon 20.0%
!! CTAATGAAATTATAGATGTT+TGG - Chr2:69230685-69230704 MsG0280010417.01.T01:intron 20.0%
!! GAATAAACAAATTTATGTTG+TGG - Chr2:69232122-69232141 MsG0280010417.01.T01:intron 20.0%
!! GCAGAAATTATTATTGATAA+CGG + Chr2:69230244-69230263 None:intergenic 20.0%
!! GTTTCAAACTTTGTATATAA+GGG + Chr2:69233660-69233679 None:intergenic 20.0%
!! TATTCAAGCTAATAAAACAT+AGG + Chr2:69232107-69232126 None:intergenic 20.0%
!! TGTATCATAAAATTCTTCAA+CGG + Chr2:69230339-69230358 None:intergenic 20.0%
!! TGTTTCAAACTTTGTATATA+AGG + Chr2:69233661-69233680 None:intergenic 20.0%
!!! AAAAGATGACTAATTTTAAG+TGG + Chr2:69232455-69232474 None:intergenic 20.0%
!!! AAAGATGACTAATTTTAAGT+GGG + Chr2:69232454-69232473 None:intergenic 20.0%
!!! AAAGTTTTGTTAATAACATG+GGG - Chr2:69232929-69232948 MsG0280010417.01.T01:intron 20.0%
!!! AAGAATTTTATGATACACAT+AGG - Chr2:69230342-69230361 MsG0280010417.01.T01:CDS 20.0%
!!! AATTTTGTAATTTTCTACGT+GGG + Chr2:69231588-69231607 None:intergenic 20.0%
!!! ATATTTATTGAGATGTTTTC+AGG + Chr2:69234059-69234078 None:intergenic 20.0%
!!! ATTAGTCATCTTTTTAGATA+TGG - Chr2:69232461-69232480 MsG0280010417.01.T01:intron 20.0%
!!! ATTTTTTTGGTTTGTGAATT+GGG - Chr2:69230297-69230316 MsG0280010417.01.T01:CDS 20.0%
!!! CAAAGTTTTGTTAATAACAT+GGG - Chr2:69232928-69232947 MsG0280010417.01.T01:intron 20.0%
!!! CTTTTTACTCAAACTTTTAA+TGG - Chr2:69231917-69231936 MsG0280010417.01.T01:intron 20.0%
!!! TAATTTTGTAATTTTCTACG+TGG + Chr2:69231589-69231608 None:intergenic 20.0%
!!! TATTTTTTTGGTTTGTGAAT+TGG - Chr2:69230296-69230315 MsG0280010417.01.T01:CDS 20.0%
!!! TCAAAGTTTTGTTAATAACA+TGG - Chr2:69232927-69232946 MsG0280010417.01.T01:intron 20.0%
!!! TTCTTTAATCTGTGTTATTA+AGG - Chr2:69232065-69232084 MsG0280010417.01.T01:intron 20.0%
!!! TTTTAAACAATGGTATAACA+AGG + Chr2:69234016-69234035 None:intergenic 20.0%
! AAAAGTTTGAGTAAAAAGCT+CGG + Chr2:69231915-69231934 None:intergenic 25.0%
! AAAATGCGCATTATGATTTA+TGG - Chr2:69230794-69230813 MsG0280010417.01.T01:intron 25.0%
! AAAATGTTAGTGATGTTGAT+TGG + Chr2:69234569-69234588 None:intergenic 25.0%
! AAATCATGCACATAAGTTTA+AGG - Chr2:69230604-69230623 MsG0280010417.01.T01:intron 25.0%
! AAATTATAGTACCTTGGATA+AGG + Chr2:69230500-69230519 None:intergenic 25.0%
! AACAATGCATTATTATATGC+AGG - Chr2:69231060-69231079 MsG0280010417.01.T01:intron 25.0%
! AACCCTAATTAAGATATGAT+TGG + Chr2:69233989-69234008 None:intergenic 25.0%
! AATTATAGTACCTTGGATAA+GGG + Chr2:69230499-69230518 None:intergenic 25.0%
! ACAATGCATTATTATATGCA+GGG - Chr2:69231061-69231080 MsG0280010417.01.T01:intron 25.0%
! AGGAAAAACGAAAAACTTAA+AGG + Chr2:69232292-69232311 None:intergenic 25.0%
! AGTTAGAAATTATAGTACCT+TGG + Chr2:69230506-69230525 None:intergenic 25.0%
! ATGATAATCCAAAACAAGAA+GGG + Chr2:69234545-69234564 None:intergenic 25.0%
! ATTGACGAAACTTACAATTT+CGG - Chr2:69232955-69232974 MsG0280010417.01.T01:intron 25.0%
! CACTTTATAAGGTGAATAAA+TGG + Chr2:69231111-69231130 None:intergenic 25.0%
! CATCCAATCATATCTTAATT+AGG - Chr2:69233983-69234002 MsG0280010417.01.T01:intron 25.0%
! CATCTAGATGGAAATTTAAT+TGG - Chr2:69230627-69230646 MsG0280010417.01.T01:intron 25.0%
! CATGGAAAAATAATATGTGA+AGG - Chr2:69233821-69233840 MsG0280010417.01.T01:intron 25.0%
! CTTTACGAACATAATTTAGT+TGG - Chr2:69230997-69231016 MsG0280010417.01.T01:intron 25.0%
! GAAACGATTCAAAAACTAAA+AGG - Chr2:69232553-69232572 MsG0280010417.01.T01:intron 25.0%
! GAAACGATTCAAAAACTAAA+AGG + Chr2:69232572-69232553 None:intergenic 25.0%
! GAAATGGTGATAAGAAAATT+GGG + Chr2:69229918-69229937 None:intergenic 25.0%
! GAAATTATAGATGTTTGGTT+TGG - Chr2:69230690-69230709 MsG0280010417.01.T01:intron 25.0%
! GATATATAAAGATTGAGGTT+TGG - Chr2:69231171-69231190 MsG0280010417.01.T01:intron 25.0%
! GCATATGTTAAAGAATTCAA+TGG - Chr2:69231417-69231436 MsG0280010417.01.T01:intron 25.0%
! GCATTATGATTTATGGAATA+TGG - Chr2:69230801-69230820 MsG0280010417.01.T01:intron 25.0%
! GGAAAAAACGAAAAACTTAA+AGG - Chr2:69232642-69232661 MsG0280010417.01.T01:intron 25.0%
! GTACAAAACAAGAAAACTAT+TGG + Chr2:69235436-69235455 None:intergenic 25.0%
! TAAAGATCAAATGCATCTAA+AGG - Chr2:69232265-69232284 MsG0280010417.01.T01:intron 25.0%
! TAAGTTTATGTTACAGATCA+TGG - Chr2:69235321-69235340 MsG0280010417.01.T01:five_prime_UTR 25.0%
! TAGTAAATGTTAACATTGCT+TGG - Chr2:69233869-69233888 MsG0280010417.01.T01:intron 25.0%
! TAGTGTTCTTTAGTGTAAAT+AGG + Chr2:69232992-69233011 None:intergenic 25.0%
! TATGTTAAAGAATTCAATGG+CGG - Chr2:69231420-69231439 MsG0280010417.01.T01:intron 25.0%
! TCAGCATTATCAATTGAATT+AGG - Chr2:69235188-69235207 MsG0280010417.01.T01:CDS 25.0%
! TGAAACTTAAATGATCACTT+TGG - Chr2:69232621-69232640 MsG0280010417.01.T01:intron 25.0%
! TGACTAACAGAAGAATTTAA+CGG - Chr2:69232862-69232881 MsG0280010417.01.T01:intron 25.0%
! TGGCTATAATTCACTTTATA+AGG + Chr2:69231122-69231141 None:intergenic 25.0%
! TTACATTTAGATTCTTTCTG+TGG + Chr2:69231971-69231990 None:intergenic 25.0%
! TTGAACGAAATCCATAAAAA+TGG + Chr2:69230183-69230202 None:intergenic 25.0%
!! AAAAAACTCATACCTTTTCT+TGG + Chr2:69230144-69230163 None:intergenic 25.0%
!! AAAAACTAAAAGGACTTGTT+TGG - Chr2:69232563-69232582 MsG0280010417.01.T01:intron 25.0%
!! AAAAACTAAAAGGACTTGTT+TGG + Chr2:69232582-69232563 None:intergenic 25.0%
!! AAAAACTCATACCTTTTCTT+GGG + Chr2:69230143-69230162 None:intergenic 25.0%
!! AAAACTAAAAGGACTTGTTT+GGG - Chr2:69232564-69232583 MsG0280010417.01.T01:intron 25.0%
!! AAAACTAAAAGGACTTGTTT+GGG + Chr2:69232583-69232564 None:intergenic 25.0%
!! AAATGTTAGTGATGTTGATT+GGG + Chr2:69234568-69234587 None:intergenic 25.0%
!! AATCATTGTTTCTTCTAACT+AGG - Chr2:69233738-69233757 MsG0280010417.01.T01:intron 25.0%
!! AATTTGAATCTGATAATGCA+GGG - Chr2:69234659-69234678 MsG0280010417.01.T01:intron 25.0%
!! AATTTTATGATACACATAGG+AGG - Chr2:69230345-69230364 MsG0280010417.01.T01:CDS 25.0%
!! AGTCTTTAACATTTTTGTGT+GGG + Chr2:69233166-69233185 None:intergenic 25.0%
!! ATCATTGTTTCTTCTAACTA+GGG - Chr2:69233739-69233758 MsG0280010417.01.T01:intron 25.0%
!! ATCTTTTTAGATATGGCAAA+TGG - Chr2:69232468-69232487 MsG0280010417.01.T01:intron 25.0%
!! ATTTTATGATACACATAGGA+GGG - Chr2:69230346-69230365 MsG0280010417.01.T01:CDS 25.0%
!! ATTTTGTAATTTTCTACGTG+GGG + Chr2:69231587-69231606 None:intergenic 25.0%
!! ATTTTTGTCATGCTTATACT+TGG - Chr2:69231730-69231749 MsG0280010417.01.T01:intron 25.0%
!! CTAGAAAAATTAGTTTAGGT+GGG + Chr2:69231943-69231962 None:intergenic 25.0%
!! TAGTCTTTAACATTTTTGTG+TGG + Chr2:69233167-69233186 None:intergenic 25.0%
!! TATTTTACTCATGTCATTAG+TGG - Chr2:69233375-69233394 MsG0280010417.01.T01:intron 25.0%
!! TTCTAAATTACCGAAGTTTT+AGG + Chr2:69233340-69233359 None:intergenic 25.0%
!!! AAACAATTTTTCAACGGTTT+GGG - Chr2:69231677-69231696 MsG0280010417.01.T01:intron 25.0%
!!! AAACTATTTTTCAACGGTTT+GGG - Chr2:69231638-69231657 MsG0280010417.01.T01:intron 25.0%
!!! AAGTTTTGTTAATAACATGG+GGG - Chr2:69232930-69232949 MsG0280010417.01.T01:intron 25.0%
!!! ATAATGCTGATATTTTTGCA+TGG + Chr2:69235178-69235197 None:intergenic 25.0%
!!! TAAACAATTTTTCAACGGTT+TGG - Chr2:69231676-69231695 MsG0280010417.01.T01:intron 25.0%
!!! TAAACTATTTTTCAACGGTT+TGG - Chr2:69231637-69231656 MsG0280010417.01.T01:intron 25.0%
!!! TGATGTTTTAACATCAAAAG+TGG + Chr2:69233717-69233736 None:intergenic 25.0%
AAAAGGTCAAATGCATCTAA+AGG + Chr2:69232669-69232688 None:intergenic 30.0%
AAAATTGTGTGAAGGATAGT+TGG - Chr2:69230724-69230743 MsG0280010417.01.T01:intron 30.0%
AAAGTTTGAGTAAAAAGCTC+GGG + Chr2:69231914-69231933 None:intergenic 30.0%
AAATCGTGCGGTATTAAAAA+AGG - Chr2:69235271-69235290 MsG0280010417.01.T01:five_prime_UTR 30.0%
ACTAATTAAGCACTTCAAAG+AGG - Chr2:69229942-69229961 MsG0280010417.01.T01:three_prime_UTR 30.0%
ATTATAGTACCTTGGATAAG+GGG + Chr2:69230498-69230517 None:intergenic 30.0%
CAATGCATTATTATATGCAG+GGG - Chr2:69231062-69231081 MsG0280010417.01.T01:intron 30.0%
CACTAAAGAACACTAAAGAT+AGG - Chr2:69232997-69233016 MsG0280010417.01.T01:intron 30.0%
CATCTCATAAGATGAATACA+TGG + Chr2:69231209-69231228 None:intergenic 30.0%
CTTACATGTAGTAGTTGTAT+TGG + Chr2:69232230-69232249 None:intergenic 30.0%
GAAACTTAAATGACCACTTT+AGG + Chr2:69232312-69232331 None:intergenic 30.0%
GATGATAATCCAAAACAAGA+AGG + Chr2:69234546-69234565 None:intergenic 30.0%
GGAAATGGTGATAAGAAAAT+TGG + Chr2:69229919-69229938 None:intergenic 30.0%
GTATCTATATCTCCAGTAAT+TGG - Chr2:69231554-69231573 MsG0280010417.01.T01:intron 30.0%
GTTTATGAACTATAGTGTAG+AGG + Chr2:69230533-69230552 None:intergenic 30.0%
TGCTTAATTAGTGTAGGAAA+TGG + Chr2:69229934-69229953 None:intergenic 30.0%
! AACCTTTTGAACTACTACAT+CGG + Chr2:69234692-69234711 None:intergenic 30.0%
! ATAAGTTTAAGGCATCTAGA+TGG - Chr2:69230615-69230634 MsG0280010417.01.T01:intron 30.0%
! ATGTGAGTATTTTTCTTGTG+AGG + Chr2:69234409-69234428 None:intergenic 30.0%
! ATTTGAATCTGATAATGCAG+GGG - Chr2:69234660-69234679 MsG0280010417.01.T01:intron 30.0%
! GAAACTTAAAGGACTTGTTT+GGG - Chr2:69232593-69232612 MsG0280010417.01.T01:intron 30.0%
! GAATTTGAATCTGATAATGC+AGG - Chr2:69234658-69234677 MsG0280010417.01.T01:intron 30.0%
! GATTTTAAACACTTTCGATG+CGG - Chr2:69231517-69231536 MsG0280010417.01.T01:intron 30.0%
! GCTAGAAAAATTAGTTTAGG+TGG + Chr2:69231944-69231963 None:intergenic 30.0%
! GGAGCTAGAAAAATTAGTTT+AGG + Chr2:69231947-69231966 None:intergenic 30.0%
! GTCTTTAACATTTTTGTGTG+GGG + Chr2:69233165-69233184 None:intergenic 30.0%
! TCATTGTTTCTTCTAACTAG+GGG - Chr2:69233740-69233759 MsG0280010417.01.T01:intron 30.0%
! TGAAACTTAAAGGACTTGTT+TGG - Chr2:69232592-69232611 MsG0280010417.01.T01:intron 30.0%
! TGGAAGAATGATGAGATTTT+GGG + Chr2:69234806-69234825 None:intergenic 30.0%
! TGTGAGTATTTTTCTTGTGA+GGG + Chr2:69234408-69234427 None:intergenic 30.0%
! TGTGGATTATACATATGATG+TGG - Chr2:69232140-69232159 MsG0280010417.01.T01:intron 30.0%
! TTGAAGTGCTTAATTAGTGT+AGG + Chr2:69229940-69229959 None:intergenic 30.0%
! TTTTGTTCGTGCATATTTCT+TGG - Chr2:69233894-69233913 MsG0280010417.01.T01:intron 30.0%
! TTTTTAGATATGGCAAATGG+TGG - Chr2:69232471-69232490 MsG0280010417.01.T01:intron 30.0%
!! ACAAGTCATTTTAGAGATGA+TGG + Chr2:69232531-69232550 None:intergenic 30.0%
!! ACTAATTTTAAGTGGGTGTT+AGG + Chr2:69232447-69232466 None:intergenic 30.0%
!! GTTTTTCGTTTTTCCTAAAG+TGG - Chr2:69232296-69232315 MsG0280010417.01.T01:intron 30.0%
!! TTAAAGAGTGCTTACAGTTA+AGG + Chr2:69234109-69234128 None:intergenic 30.0%
!!! TTGGGACTTTTGAAACTTAA+AGG - Chr2:69232582-69232601 MsG0280010417.01.T01:intron 30.0%
!!! TTTTTTGTCAGATAGTCTAG+TGG + Chr2:69231142-69231161 None:intergenic 30.0%
AACATACATGCACATCTCAT+AGG + Chr2:69232178-69232197 None:intergenic 35.0%
AACGTTGTGCAATTTCAGAA+GGG - Chr2:69232901-69232920 MsG0280010417.01.T01:intron 35.0%
ACAGAAGAATTTAACGGAAG+AGG - Chr2:69232868-69232887 MsG0280010417.01.T01:intron 35.0%
ACGAAACTTACAATTTCGGA+TGG - Chr2:69232959-69232978 MsG0280010417.01.T01:intron 35.0%
AGATTGAGAGAGATTAAGAG+AGG + Chr2:69229828-69229847 None:intergenic 35.0%
CACTTGGAATATTTCTCTGT+CGG + Chr2:69235118-69235137 None:intergenic 35.0%
CATTTAGATTCTTTCTGTGG+CGG + Chr2:69231968-69231987 None:intergenic 35.0%
CCAACTATGCTATCTACAAT+AGG + Chr2:69232383-69232402 None:intergenic 35.0%
CCTATTGTAGATAGCATAGT+TGG - Chr2:69232380-69232399 MsG0280010417.01.T01:intron 35.0%
CGTTTGTACATGATTGCTTA+TGG + Chr2:69229987-69230006 None:intergenic 35.0%
GAGAGGTTTAGTGATTGAAA+TGG - Chr2:69234295-69234314 MsG0280010417.01.T01:intron 35.0%
TAACGTTGTGCAATTTCAGA+AGG - Chr2:69232900-69232919 MsG0280010417.01.T01:intron 35.0%
TAACTGACGCAGTTGTAAAA+TGG - Chr2:69230206-69230225 MsG0280010417.01.T01:CDS 35.0%
TACCGATGTAGTAGTTCAAA+AGG - Chr2:69234687-69234706 MsG0280010417.01.T01:intron 35.0%
TGTCATGCTTATACTTGGTT+GGG - Chr2:69231735-69231754 MsG0280010417.01.T01:intron 35.0%
TTAGTGTCTTCACAAGAAGA+GGG + Chr2:69230104-69230123 None:intergenic 35.0%
TTGTCATGCTTATACTTGGT+TGG - Chr2:69231734-69231753 MsG0280010417.01.T01:intron 35.0%
TTTAGTGTCTTCACAAGAAG+AGG + Chr2:69230105-69230124 None:intergenic 35.0%
! ACGTTAGCAAAAGTACATCT+AGG + Chr2:69232706-69232725 None:intergenic 35.0%
! GTGGAAGAATGATGAGATTT+TGG + Chr2:69234807-69234826 None:intergenic 35.0%
! TTTAATACCGCACGATTTTC+AGG + Chr2:69235269-69235288 None:intergenic 35.0%
!! AATGATGAGATTTTGGGAGA+GGG + Chr2:69234800-69234819 None:intergenic 35.0%
!! ATGTTTGGTTTGGAAATGCA+TGG - Chr2:69230700-69230719 MsG0280010417.01.T01:intron 35.0%
!! TCTTTCGACTTGTTTTCTTG+CGG + Chr2:69234718-69234737 None:intergenic 35.0%
AAGAACCATCACCCAAGAAA+AGG - Chr2:69230129-69230148 MsG0280010417.01.T01:CDS 40.0%
AAGGGAAAGTGACACATCTA+TGG + Chr2:69234527-69234546 None:intergenic 40.0%
AGACGCAAGCAAATTGTGAA+AGG + Chr2:69233029-69233048 None:intergenic 40.0%
AGGTGAATAAATGGGATGTC+CGG + Chr2:69231102-69231121 None:intergenic 40.0%
ATCATCGAACCATCCAAACA+CGG + Chr2:69234967-69234986 None:intergenic 40.0%
ATTGGATGACCACAAGATGA+AGG + Chr2:69233971-69233990 None:intergenic 40.0%
CAAATAAAAAACACGGCCTG+TGG - Chr2:69233688-69233707 MsG0280010417.01.T01:intron 40.0%
CATCTCATAGGCACTTATTC+TGG + Chr2:69232166-69232185 None:intergenic 40.0%
CCAAGTGTGTTTCAGTATAG+CGG - Chr2:69235131-69235150 MsG0280010417.01.T01:CDS 40.0%
GCATTATTATATGCAGGGGT+TGG - Chr2:69231066-69231085 MsG0280010417.01.T01:intron 40.0%
GTGGTGGTAGTTAGAAACTT+TGG - Chr2:69230840-69230859 MsG0280010417.01.T01:intron 40.0%
TATAGTCATGTGAGCTCAGT+TGG - Chr2:69231034-69231053 MsG0280010417.01.T01:intron 40.0%
TCTATGCATCCTTCATCTTG+TGG - Chr2:69233959-69233978 MsG0280010417.01.T01:intron 40.0%
TGCATGGCAAAATTGTGTGA+AGG - Chr2:69230716-69230735 MsG0280010417.01.T01:intron 40.0%
TGCTTCCTTGAACTCATCTT+TGG - Chr2:69232407-69232426 MsG0280010417.01.T01:intron 40.0%
TGGTACCAAAGATGAGTTCA+AGG + Chr2:69232415-69232434 None:intergenic 40.0%
TTCGATGATGTTGTATCCAC+CGG - Chr2:69234978-69234997 MsG0280010417.01.T01:intron 40.0%
TTTCAGTATAGCGGCATTAC+AGG - Chr2:69235140-69235159 MsG0280010417.01.T01:CDS 40.0%
! ATGTGAAGGAGTATGAGCAT+TGG - Chr2:69233835-69233854 MsG0280010417.01.T01:intron 40.0%
! GAATATGGATTGTGCCATTG+TGG - Chr2:69230816-69230835 MsG0280010417.01.T01:intron 40.0%
! TCATACCTTTTCTTGGGTGA+TGG + Chr2:69230137-69230156 None:intergenic 40.0%
!! CTTTCGACTTGTTTTCTTGC+GGG + Chr2:69234717-69234736 None:intergenic 40.0%
!! GAATGATGAGATTTTGGGAG+AGG + Chr2:69234801-69234820 None:intergenic 40.0%
!! GTCACTTTCCCTTCTTGTTT+TGG - Chr2:69234534-69234553 MsG0280010417.01.T01:intron 40.0%
ACATCAAAAGTGGACACCAC+AGG + Chr2:69233707-69233726 None:intergenic 45.0%
ATACCAATTGCTGACGTGGA+AGG - Chr2:69230392-69230411 MsG0280010417.01.T01:CDS 45.0%
ATAGGAGGGAGATGAAGAAG+AGG - Chr2:69230360-69230379 MsG0280010417.01.T01:CDS 45.0%
ATATCCACCGTCGGATTCAT+GGG - Chr2:69230436-69230455 MsG0280010417.01.T01:CDS 45.0%
ATCAATGCGTGAAACCAACG+TGG + Chr2:69230897-69230916 None:intergenic 45.0%
CCGCTATACTGAAACACACT+TGG + Chr2:69235134-69235153 None:intergenic 45.0%
CTGTTTAATATGAGCCGCCA+TGG + Chr2:69229795-69229814 None:intergenic 45.0%
GACTATACCAATTGCTGACG+TGG - Chr2:69230388-69230407 MsG0280010417.01.T01:CDS 45.0%
GATAAGAAAATTGGGCTCGC+CGG + Chr2:69229910-69229929 None:intergenic 45.0%
GATATGACACATCAGACACG+TGG - Chr2:69232804-69232823 MsG0280010417.01.T01:intron 45.0%
GGTGAATAAATGGGATGTCC+GGG + Chr2:69231101-69231120 None:intergenic 45.0%
GTGAATAAATGGGATGTCCG+GGG + Chr2:69231100-69231119 None:intergenic 45.0%
GTGACATTTGACTGTCTACG+TGG + Chr2:69232835-69232854 None:intergenic 45.0%
GTGGAAGGATCTAAGAGTAG+AGG - Chr2:69230407-69230426 MsG0280010417.01.T01:CDS 45.0%
GTTCTCGTAAGTCCGATATG+CGG - Chr2:69235002-69235021 MsG0280010417.01.T01:intron 45.0%
TAACTACCACCACACCACAA+TGG + Chr2:69230833-69230852 None:intergenic 45.0%
TACGGTCAAAAGCCCATCAA+AGG - Chr2:69230470-69230489 MsG0280010417.01.T01:CDS 45.0%
TAGGAGGGAGATGAAGAAGA+GGG - Chr2:69230361-69230380 MsG0280010417.01.T01:CDS 45.0%
TAGGTTACGAGGAGGTTTGT+GGG + Chr2:69234753-69234772 None:intergenic 45.0%
TATACTTGGTTGGGTAGCAG+AGG - Chr2:69231744-69231763 MsG0280010417.01.T01:intron 45.0%
TATCGGACTTACGAGAACTC+CGG + Chr2:69235000-69235019 None:intergenic 45.0%
TCATGGGCTTGGAGAAAGTA+CGG - Chr2:69230452-69230471 MsG0280010417.01.T01:CDS 45.0%
TGATGTACGCGCTTAAGATG+TGG - Chr2:69234495-69234514 MsG0280010417.01.T01:intron 45.0%
TGGGTGTTAGGAGCAAGATT+TGG + Chr2:69232435-69232454 None:intergenic 45.0%
! TAGGGGCACAAAATGTGCTT+AGG - Chr2:69233757-69233776 MsG0280010417.01.T01:intron 45.0%
!! ATGAGATTTTGGGAGAGGGA+GGG + Chr2:69234796-69234815 None:intergenic 45.0%
!! TCAACGGTTTGGGTTTTCGA+CGG - Chr2:69231687-69231706 MsG0280010417.01.T01:intron 45.0%
!!! GATTTTTTATTTTATTTTTT+TGG - Chr2:69230284-69230303 MsG0280010417.01.T01:CDS 5.0%
!!! TATATATCTTATAATTTTTT+GGG - Chr2:69231769-69231788 MsG0280010417.01.T01:intron 5.0%
!!! TTATATATCTTATAATTTTT+TGG - Chr2:69231768-69231787 MsG0280010417.01.T01:intron 5.0%
!!! TTTTTAATTTTTAATTTTTC+CGG + Chr2:69231470-69231489 None:intergenic 5.0%
AAGCGTAGGGAAGTAGGTTG+AGG - Chr2:69230760-69230779 MsG0280010417.01.T01:intron 50.0%
ACAAGTCGAAAGAAGCCGTG+TGG - Chr2:69234725-69234744 MsG0280010417.01.T01:intron 50.0%
ACCTACTTCCCTACGCTTGA+AGG + Chr2:69230758-69230777 None:intergenic 50.0%
AGGAGAGACATATCCACCGT+CGG - Chr2:69230427-69230446 MsG0280010417.01.T01:CDS 50.0%
AGGTTACGAGGAGGTTTGTG+GGG + Chr2:69234752-69234771 None:intergenic 50.0%
ATCACAACGCCGTGTTTGGA+TGG - Chr2:69234955-69234974 MsG0280010417.01.T01:intron 50.0%
CATATCCACCGTCGGATTCA+TGG - Chr2:69230435-69230454 MsG0280010417.01.T01:CDS 50.0%
CGGAAAACCGTTGAACACTC+CGG + Chr2:69235098-69235117 None:intergenic 50.0%
GAGGGAGTGGTTGTGTTCAT+GGG + Chr2:69234778-69234797 None:intergenic 50.0%
GATCCTTCCACGTCAGCAAT+TGG + Chr2:69230398-69230417 None:intergenic 50.0%
GGATAAGGGGAGCCTTTGAT+GGG + Chr2:69230485-69230504 None:intergenic 50.0%
GTAGGTTACGAGGAGGTTTG+TGG + Chr2:69234754-69234773 None:intergenic 50.0%
TACTTCCCTACGCTTGAAGG+AGG + Chr2:69230755-69230774 None:intergenic 50.0%
TCAAAGGCTCCCCTTATCCA+AGG - Chr2:69230486-69230505 MsG0280010417.01.T01:CDS 50.0%
TCACAAGAAGAGGGAGAAGC+AGG + Chr2:69230095-69230114 None:intergenic 50.0%
TCCTTCAAGCGTAGGGAAGT+AGG - Chr2:69230754-69230773 MsG0280010417.01.T01:intron 50.0%
TCTCCGAGATCGGCAAACAA+CGG + Chr2:69235071-69235090 None:intergenic 50.0%
TCTCGGTCAGCAACATACAG+TGG + Chr2:69230026-69230045 None:intergenic 50.0%
TGGATAAGGGGAGCCTTTGA+TGG + Chr2:69230486-69230505 None:intergenic 50.0%
TTCACGGCCTGAAAATCGTG+CGG - Chr2:69235259-69235278 MsG0280010417.01.T01:five_prime_UTR 50.0%
TTCATGAGTCGTGGTACACC+CGG - Chr2:69231448-69231467 MsG0280010417.01.T01:intron 50.0%
! AGAGTTGCCGGAGTGTTCAA+CGG - Chr2:69235088-69235107 MsG0280010417.01.T01:intron 50.0%
! AGCGTAGGGAAGTAGGTTGA+GGG - Chr2:69230761-69230780 MsG0280010417.01.T01:intron 50.0%
! ATTGTGCCATTGTGGTGTGG+TGG - Chr2:69230824-69230843 MsG0280010417.01.T01:intron 50.0%
! TCAACGGTTTGGGTTTCCGA+CGG - Chr2:69231648-69231667 MsG0280010417.01.T01:intron 50.0%
! TGGATTGTGCCATTGTGGTG+TGG - Chr2:69230821-69230840 MsG0280010417.01.T01:intron 50.0%
! TGGGGCACTACACCAATTAC+TGG + Chr2:69231569-69231588 None:intergenic 50.0%
!! GATGAGATTTTGGGAGAGGG+AGG + Chr2:69234797-69234816 None:intergenic 50.0%
AAACACGGCGTTGTGATCGC+CGG + Chr2:69234952-69234971 None:intergenic 55.0%
ATCGCCGGTGAGGTCAAAGT+CGG + Chr2:69234937-69234956 None:intergenic 55.0%
CATCCCGACTTTGACCTCAC+CGG - Chr2:69234930-69234949 MsG0280010417.01.T01:intron 55.0%
CGTCACCTCCTTCAAGCGTA+GGG - Chr2:69230747-69230766 MsG0280010417.01.T01:intron 55.0%
CTCCAAGCCCATGAATCCGA+CGG + Chr2:69230446-69230465 None:intergenic 55.0%
CTCGTAAGTCCGATATGCGG+CGG - Chr2:69235005-69235024 MsG0280010417.01.T01:intron 55.0%
GAGCCGTTGTTTGCCGATCT+CGG - Chr2:69235065-69235084 MsG0280010417.01.T01:intron 55.0%
GAGGGAGATGAAGAAGAGGG+TGG - Chr2:69230364-69230383 MsG0280010417.01.T01:CDS 55.0%
GAGGTCAAAGTCGGGATGAG+TGG + Chr2:69234928-69234947 None:intergenic 55.0%
GGAGGGAGTGGTTGTGTTCA+TGG + Chr2:69234779-69234798 None:intergenic 55.0%
GGGTGTACCACGACTCATGA+AGG + Chr2:69231449-69231468 None:intergenic 55.0%
GTCGGGATGAGTGGCGAAAA+CGG + Chr2:69234919-69234938 None:intergenic 55.0%
GTGGTTGTGTTCATGGGCGT+AGG + Chr2:69234772-69234791 None:intergenic 55.0%
GTTCATGGGCGTAGGTTACG+AGG + Chr2:69234764-69234783 None:intergenic 55.0%
TCCTCTACTCCGCCGCATAT+CGG + Chr2:69235017-69235036 None:intergenic 55.0%
TCGGGATGAGTGGCGAAAAC+GGG + Chr2:69234918-69234937 None:intergenic 55.0%
TGTGACGTTGACGATGCGAG+AGG - Chr2:69235037-69235056 MsG0280010417.01.T01:intron 55.0%
! GTAGGGAAGTAGGTTGAGGG+TGG - Chr2:69230764-69230783 MsG0280010417.01.T01:intron 55.0%
!! ACGCGAGCTCTAAACCACGT+TGG - Chr2:69230880-69230899 MsG0280010417.01.T01:intron 55.0%
!! ATTTTGGGAGAGGGAGGGAG+TGG + Chr2:69234791-69234810 None:intergenic 55.0%
AAGACGAAGAGAGGGGTGGC+CGG + Chr2:69229887-69229906 None:intergenic 60.0%
AGGGGTTGGAGTTCGAACCC+CGG - Chr2:69231080-69231099 MsG0280010417.01.T01:intron 60.0%
ATGGGCTCGAGCTTGAGCTC+AGG + Chr2:69230059-69230078 None:intergenic 60.0%
CAAGCCCATGAATCCGACGG+TGG + Chr2:69230443-69230462 None:intergenic 60.0%
CACCGTCGGATTCATGGGCT+TGG - Chr2:69230441-69230460 MsG0280010417.01.T01:CDS 60.0%
CATGGGCGTAGGTTACGAGG+AGG + Chr2:69234761-69234780 None:intergenic 60.0%
CCACCCCTCTCTTCGTCTTC+CGG - Chr2:69229888-69229907 MsG0280010417.01.T01:three_prime_UTR 60.0%
CCACTCCTCAGCCGGAAGAT+CGG - Chr2:69234892-69234911 MsG0280010417.01.T01:intron 60.0%
CGGACTTACGAGAACTCCGG+TGG + Chr2:69234997-69235016 None:intergenic 60.0%
CTCCGGCAACTCTCCGAGAT+CGG + Chr2:69235081-69235100 None:intergenic 60.0%
CTCGAGCCCATCTCAGAAGC+GGG - Chr2:69230068-69230087 MsG0280010417.01.T01:exon 60.0%
CTCGAGCTTGAGCTCAGGCT+CGG + Chr2:69230054-69230073 None:intergenic 60.0%
CTCGCCGGAAGACGAAGAGA+GGG + Chr2:69229895-69229914 None:intergenic 60.0%
GACGTTGACGATGCGAGAGG+AGG - Chr2:69235040-69235059 MsG0280010417.01.T01:intron 60.0%
GCGAAAACGGGCCGATCTTC+CGG + Chr2:69234906-69234925 None:intergenic 60.0%
GCGGAGTCCTTCATGAGTCG+TGG - Chr2:69231439-69231458 MsG0280010417.01.T01:intron 60.0%
GCGTCACCTCCTTCAAGCGT+AGG - Chr2:69230746-69230765 MsG0280010417.01.T01:intron 60.0%
GCTCGAGCCCATCTCAGAAG+CGG - Chr2:69230067-69230086 MsG0280010417.01.T01:three_prime_UTR 60.0%
GGAGGTTTGTGGGGTCCACA+CGG + Chr2:69234743-69234762 None:intergenic 60.0%
GGCGATCACAACGCCGTGTT+TGG - Chr2:69234951-69234970 MsG0280010417.01.T01:intron 60.0%
TCCGATATGCGGCGGAGTAG+AGG - Chr2:69235013-69235032 MsG0280010417.01.T01:intron 60.0%
TCGAGCCCATCTCAGAAGCG+GGG - Chr2:69230069-69230088 MsG0280010417.01.T01:exon 60.0%
TCGAGCTTGAGCTCAGGCTC+GGG + Chr2:69230053-69230072 None:intergenic 60.0%
TCGCCGGAAGACGAAGAGAG+GGG + Chr2:69229894-69229913 None:intergenic 60.0%
TCGCCGGTGAGGTCAAAGTC+GGG + Chr2:69234936-69234955 None:intergenic 60.0%
TGCCGATCTCGGAGAGTTGC+CGG - Chr2:69235076-69235095 MsG0280010417.01.T01:intron 60.0%
!! AGTGTCGACGGCAGCTGTGA+CGG + Chr2:69234847-69234866 None:intergenic 60.0%
!! GTGGTGGTGGTGATGAGGAG+AGG + Chr2:69229857-69229876 None:intergenic 60.0%
!! TGGTGGTGGTGGTGGTGATG+AGG + Chr2:69229862-69229881 None:intergenic 60.0%
CACCACCACCACCACCACTC+CGG - Chr2:69229865-69229884 MsG0280010417.01.T01:three_prime_UTR 65.0%
CCGATCTTCCGGCTGAGGAG+TGG + Chr2:69234895-69234914 None:intergenic 65.0%
CCGGAAGACGAAGAGAGGGG+TGG + Chr2:69229891-69229910 None:intergenic 65.0%
GCCGTCGACACTCCTTCTCC+CGG - Chr2:69234855-69234874 MsG0280010417.01.T01:CDS 65.0%
GCTCAGGCTCGGGCTCATCT+CGG + Chr2:69230043-69230062 None:intergenic 65.0%
GCTCGCCGGAAGACGAAGAG+AGG + Chr2:69229896-69229915 None:intergenic 65.0%
TCCTTCTCCCGGCGAGTCTC+CGG - Chr2:69234866-69234885 MsG0280010417.01.T01:CDS 65.0%
! AGCAGGCCCCGCTTCTGAGA+TGG + Chr2:69230078-69230097 None:intergenic 65.0%
! AGCTGTGACGGTGGCGGTGA+CGG + Chr2:69234835-69234854 None:intergenic 65.0%
!! GCAGGCCCCGCTTCTGAGAT+GGG + Chr2:69230077-69230096 None:intergenic 65.0%
!! GCCGGGAGAAGGAGTGTCGA+CGG + Chr2:69234859-69234878 None:intergenic 65.0%
ACGGGCCGATCTTCCGGCTG+AGG + Chr2:69234900-69234919 None:intergenic 70.0%
AGTGGCAGCCGGAGACTCGC+CGG + Chr2:69234877-69234896 None:intergenic 70.0%
CGGCGTTGTGATCGCCGGTG+AGG + Chr2:69234947-69234966 None:intergenic 70.0%
GAAGAGAGGGGTGGCCGGAG+TGG + Chr2:69229882-69229901 None:intergenic 70.0%
GACGGCAGCTGTGACGGTGG+CGG + Chr2:69234841-69234860 None:intergenic 70.0%
GTCGACGGCAGCTGTGACGG+TGG + Chr2:69234844-69234863 None:intergenic 70.0%
TCCGGCTGAGGAGTGGCAGC+CGG + Chr2:69234888-69234907 None:intergenic 70.0%
TCCGGCTGCCACTCCTCAGC+CGG - Chr2:69234884-69234903 MsG0280010417.01.T01:intron 70.0%
AGGGGTGGCCGGAGTGGTGG+TGG + Chr2:69229876-69229895 None:intergenic 75.0%
GAGAGGGGTGGCCGGAGTGG+TGG + Chr2:69229879-69229898 None:intergenic 75.0%
GCCGGAGACTCGCCGGGAGA+AGG + Chr2:69234870-69234889 None:intergenic 75.0%
GTGGCAGCCGGAGACTCGCC+GGG + Chr2:69234876-69234895 None:intergenic 75.0%
! GACGGTGGCGGTGACGGCAG+TGG + Chr2:69234829-69234848 None:intergenic 75.0%
! GGTGGCGGTGACGGCAGTGG+TGG + Chr2:69234826-69234845 None:intergenic 75.0%
!! GGCCGGAGTGGTGGTGGTGG+TGG + Chr2:69229870-69229889 None:intergenic 75.0%
!! GGTGGCCGGAGTGGTGGTGG+TGG + Chr2:69229873-69229892 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 69229792 69235461 69229792 ID=MsG0280010417.01;Name=MsG0280010417.01
Chr2 mRNA 69229792 69235461 69229792 ID=MsG0280010417.01.T01;Parent=MsG0280010417.01;Name=MsG0280010417.01.T01;_AED=0.42;_eAED=0.42;_QI=204|1|1|1|1|1|3|295|261
Chr2 exon 69229792 69230573 69229792 ID=MsG0280010417.01.T01:exon:35367;Parent=MsG0280010417.01.T01
Chr2 exon 69234746 69234889 69234746 ID=MsG0280010417.01.T01:exon:35366;Parent=MsG0280010417.01.T01
Chr2 exon 69235103 69235461 69235103 ID=MsG0280010417.01.T01:exon:35365;Parent=MsG0280010417.01.T01
Chr2 five_prime_UTR 69235258 69235461 69235258 ID=MsG0280010417.01.T01:five_prime_utr;Parent=MsG0280010417.01.T01
Chr2 CDS 69235103 69235257 69235103 ID=MsG0280010417.01.T01:cds;Parent=MsG0280010417.01.T01
Chr2 CDS 69234746 69234889 69234746 ID=MsG0280010417.01.T01:cds;Parent=MsG0280010417.01.T01
Chr2 CDS 69230087 69230573 69230087 ID=MsG0280010417.01.T01:cds;Parent=MsG0280010417.01.T01
Chr2 three_prime_UTR 69229792 69230086 69229792 ID=MsG0280010417.01.T01:three_prime_utr;Parent=MsG0280010417.01.T01
Gene Sequence

>MsG0280010417.01.T01

ATGTACAAACGTAGATTCAACACTAAACCACTGTATGTTGCTGACCGAGATGAGCCCGAGCCTGAGCTCAAGCTCGAGCCCATCTCAGAAGCGGGGCCTGCTTCTCCCTCTTCTTGTGAAGACACTAAAATTGAAGAACCATCACCCAAGAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACTATACCAATTGCTGACGTGGAAGGATCTAAGAGTAGAGGAGAGACATATCCACCGTCGGATTCATGGGCTTGGAGAAAGTACGGTCAAAAGCCCATCAAAGGCTCCCCTTATCCAAGGGGATACTACCGATGTAGTAGTTCAAAAGGTTGTCCCGCAAGAAAACAAGTCGAAAGAAGCCGTGTGGACCCCACAAACCTCCTCGTAACCTACGCCCATGAACACAACCACTCCCTCCCTCTCCCAAAATCTCATCATTCTTCCACCACTGCCGTCACCGCCACCGTCACAGCTGCCGTCGACACTCCTTCTCCCGGCGAGTCTCCGGCTGCCACTCCTCAGCCGGAAGATCGGCCCGTTTTCGCCACTCATCCCGACTTTGACCTCACCGGCGATCACAACGCCGTGTTTGGATGGTTCGATGATGTTGTATCCACCGGAGTTCTCGTAAGTCCGATATGCGGCGGAGTAGAGGATGTGACGTTGACGATGCGAGAGGAGGATGAGCCGTTGTTTGCCGATCTCGGAGAGTTGCCGGAGTGTTCAACGGTTTTCCGACAGAGAAATATTCCAAGTGTGTTTCAGTATAGCGGCATTACAGGATAA

Protein sequence

>MsG0280010417.01.T01

MYKRRFNTKPLYVADRDEPEPELKLEPISEAGPASPSSCEDTKIEEPSPKKRREMKKRVVTIPIADVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTNLLVTYAHEHNHSLPLPKSHHSSTTAVTATVTAAVDTPSPGESPAATPQPEDRPVFATHPDFDLTGDHNAVFGWFDDVVSTGVLVSPICGGVEDVTLTMREEDEPLFADLGELPECSTVFRQRNIPSVFQYSGITG*