Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043459.01.T01 | XP_013445011.1 | 99.026 | 308 | 2 | 1 | 1 | 307 | 1 | 308 | 0 | 610 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043459.01.T01 | O22130 | 64.815 | 324 | 90 | 10 | 1 | 307 | 1 | 317 | 2.77E-90 | 274 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043459.01.T01 | A0A072TPA5 | 99.026 | 308 | 2 | 1 | 1 | 307 | 1 | 308 | 0.0 | 610 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180001800.01 | MsG0880043459.01 | 0.815676 | 8.182846e-52 | 5.678815e-49 |
MsG0180003237.01 | MsG0880043459.01 | 0.815125 | 1.085238e-51 | 7.417919e-49 |
MsG0180004059.01 | MsG0880043459.01 | 0.810294 | 1.237961e-50 | 7.433754e-48 |
MsG0180004424.01 | MsG0880043459.01 | 0.819233 | 1.292972e-52 | 9.893187e-50 |
MsG0180005130.01 | MsG0880043459.01 | 0.857785 | 1.287820e-62 | 3.215399e-59 |
MsG0180005143.01 | MsG0880043459.01 | 0.856687 | 2.717956e-62 | 6.539775e-59 |
MsG0880043459.01 | MsG0880043530.01 | 0.802234 | 6.180188e-49 | 3.011667e-46 |
MsG0880043459.01 | MsG0880043997.01 | 0.833165 | 6.236747e-56 | 7.124214e-53 |
MsG0880043459.01 | MsG0880044026.01 | 0.828930 | 6.835033e-55 | 6.891317e-52 |
MsG0880043459.01 | MsG0880045801.01 | 0.824025 | 1.009255e-53 | 8.834776e-51 |
MsG0880043459.01 | MsG0880046334.01 | 0.802959 | 4.380128e-49 | 2.174220e-46 |
MsG0880043459.01 | MsG0880046434.01 | 0.806746 | 7.083046e-50 | 3.874885e-47 |
MsG0880043459.01 | MsG0880046768.01 | 0.815500 | 8.956564e-52 | 6.185958e-49 |
MsG0880043459.01 | MsG0880046870.01 | 0.809756 | 1.616359e-50 | 9.571125e-48 |
MsG0880043459.01 | MsG0880047312.01 | 0.832752 | 7.900603e-56 | 8.913624e-53 |
MsG0880043459.01 | MsG0880047383.01 | 0.800287 | 1.546585e-48 | 7.174049e-46 |
MsG0880043459.01 | MsG0880047460.01 | 0.847316 | 1.248958e-59 | 2.210979e-56 |
MsG0880043459.01 | MsG0880047697.01 | 0.801895 | 7.256383e-49 | 3.505825e-46 |
MsG0280010623.01 | MsG0880043459.01 | 0.817123 | 3.882166e-52 | 2.802832e-49 |
MsG0280010926.01 | MsG0880043459.01 | -0.815827 | 7.571948e-52 | 5.276291e-49 |
MsG0380013212.01 | MsG0880043459.01 | 0.835243 | 1.879565e-56 | 2.285248e-53 |
MsG0380013213.01 | MsG0880043459.01 | 0.837849 | 4.076663e-57 | 5.363323e-54 |
MsG0680031200.01 | MsG0880043459.01 | 0.845516 | 3.867736e-59 | 6.461522e-56 |
MsG0680032026.01 | MsG0880043459.01 | 0.834056 | 3.737063e-56 | 4.384180e-53 |
MsG0680032461.01 | MsG0880043459.01 | 0.816799 | 4.589974e-52 | 3.284566e-49 |
MsG0680034980.01 | MsG0880043459.01 | 0.808854 | 2.524431e-50 | 1.459172e-47 |
MsG0680034981.01 | MsG0880043459.01 | 0.842732 | 2.160570e-58 | 3.305759e-55 |
MsG0480018617.01 | MsG0880043459.01 | 0.808545 | 2.938449e-50 | 1.684851e-47 |
MsG0480018692.01 | MsG0880043459.01 | 0.851558 | 8.208301e-61 | 1.667826e-57 |
MsG0480018693.01 | MsG0880043459.01 | 0.862681 | 4.264474e-64 | 1.259495e-60 |
MsG0480018697.01 | MsG0880043459.01 | 0.846276 | 2.405161e-59 | 4.117817e-56 |
MsG0480019322.01 | MsG0880043459.01 | 0.805078 | 1.587869e-49 | 8.323404e-47 |
MsG0480019346.01 | MsG0880043459.01 | 0.828708 | 7.734185e-55 | 7.748016e-52 |
MsG0480019348.01 | MsG0880043459.01 | 0.818127 | 2.304651e-52 | 1.710397e-49 |
MsG0480019817.01 | MsG0880043459.01 | 0.808699 | 2.724002e-50 | 1.568111e-47 |
MsG0480021063.01 | MsG0880043459.01 | 0.809383 | 1.944541e-50 | 1.140066e-47 |
MsG0480021091.01 | MsG0880043459.01 | 0.818399 | 2.000017e-52 | 1.495618e-49 |
MsG0580024649.01 | MsG0880043459.01 | 0.802980 | 4.336899e-49 | 2.153866e-46 |
MsG0580024782.01 | MsG0880043459.01 | 0.858781 | 6.506138e-63 | 1.679865e-59 |
MsG0580024994.01 | MsG0880043459.01 | 0.824496 | 7.822188e-54 | 6.939989e-51 |
MsG0580025024.01 | MsG0880043459.01 | 0.805591 | 1.240068e-49 | 6.586377e-47 |
MsG0380016458.01 | MsG0880043459.01 | 0.847167 | 1.372217e-59 | 2.418042e-56 |
MsG0380016836.01 | MsG0880043459.01 | -0.808987 | 2.363904e-50 | 1.371246e-47 |
MsG0380017200.01 | MsG0880043459.01 | 0.805994 | 1.020169e-49 | 5.475092e-47 |
MsG0380017694.01 | MsG0880043459.01 | 0.803006 | 4.283563e-49 | 2.128715e-46 |
MsG0580027751.01 | MsG0880043459.01 | 0.826985 | 2.007859e-54 | 1.912952e-51 |
MsG0580027753.01 | MsG0880043459.01 | 0.833100 | 6.475595e-56 | 7.382846e-53 |
MsG0580028587.01 | MsG0880043459.01 | 0.823136 | 1.629580e-53 | 1.391307e-50 |
MsG0580029937.01 | MsG0880043459.01 | 0.813593 | 2.366934e-51 | 1.552248e-48 |
MsG0580029938.01 | MsG0880043459.01 | 0.808246 | 3.402552e-50 | 1.935830e-47 |
MsG0680030379.01 | MsG0880043459.01 | 0.816967 | 4.208373e-52 | 3.025760e-49 |
MsG0680030382.01 | MsG0880043459.01 | 0.805093 | 1.576694e-49 | 8.267866e-47 |
MsG0280007513.01 | MsG0880043459.01 | 0.820370 | 7.108768e-53 | 5.614408e-50 |
MsG0280007677.01 | MsG0880043459.01 | 0.841272 | 5.255555e-58 | 7.681776e-55 |
MsG0280007869.01 | MsG0880043459.01 | 0.851728 | 7.346103e-61 | 1.500874e-57 |
MsG0280007874.01 | MsG0880043459.01 | 0.802477 | 5.507279e-49 | 2.700396e-46 |
MsG0280007910.01 | MsG0880043459.01 | 0.822286 | 2.569161e-53 | 2.141195e-50 |
MsG0280008178.01 | MsG0880043459.01 | 0.813792 | 2.139585e-51 | 1.410694e-48 |
MsG0780035932.01 | MsG0880043459.01 | 0.852585 | 4.191995e-61 | 8.799926e-58 |
MsG0780036649.01 | MsG0880043459.01 | 0.834254 | 3.332692e-56 | 3.933457e-53 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043459.01.T01 | MTR_8g036060 | 99.026 | 308 | 2 | 1 | 1 | 307 | 1 | 308 | 0.0 | 610 |
MsG0880043459.01.T01 | MTR_5g091630 | 54.104 | 268 | 98 | 4 | 35 | 300 | 2 | 246 | 8.17e-78 | 238 |
MsG0880043459.01.T01 | MTR_5g011520 | 88.462 | 156 | 18 | 0 | 84 | 239 | 98 | 253 | 2.09e-77 | 239 |
MsG0880043459.01.T01 | MTR_7g080980 | 59.615 | 208 | 74 | 3 | 95 | 302 | 66 | 263 | 2.71e-68 | 214 |
MsG0880043459.01.T01 | MTR_3g068035 | 55.455 | 220 | 78 | 4 | 96 | 300 | 89 | 303 | 1.45e-67 | 213 |
MsG0880043459.01.T01 | MTR_4g098450 | 52.518 | 278 | 114 | 3 | 34 | 307 | 33 | 296 | 1.63e-67 | 213 |
MsG0880043459.01.T01 | MTR_1g079810 | 56.485 | 239 | 80 | 4 | 86 | 307 | 74 | 305 | 1.93e-67 | 213 |
MsG0880043459.01.T01 | MTR_1g044155 | 76.623 | 154 | 35 | 1 | 83 | 235 | 122 | 275 | 4.85e-67 | 214 |
MsG0880043459.01.T01 | MTR_1g073860 | 76.667 | 150 | 35 | 0 | 86 | 235 | 94 | 243 | 3.37e-66 | 210 |
MsG0880043459.01.T01 | MTR_3g100470 | 40.523 | 306 | 144 | 9 | 6 | 306 | 15 | 287 | 6.51e-60 | 193 |
MsG0880043459.01.T01 | MTR_5g080580 | 65.000 | 140 | 49 | 0 | 96 | 235 | 99 | 238 | 1.00e-52 | 176 |
MsG0880043459.01.T01 | MTR_5g066020 | 40.000 | 275 | 132 | 5 | 38 | 307 | 6 | 252 | 3.95e-47 | 159 |
MsG0880043459.01.T01 | MTR_5g089600 | 38.255 | 149 | 81 | 2 | 86 | 223 | 77 | 225 | 2.75e-30 | 114 |
MsG0880043459.01.T01 | MTR_4g057487 | 32.547 | 212 | 121 | 5 | 86 | 275 | 17 | 228 | 3.13e-24 | 99.0 |
MsG0880043459.01.T01 | MTR_5g010330 | 38.854 | 157 | 89 | 3 | 75 | 225 | 93 | 248 | 3.34e-24 | 100 |
MsG0880043459.01.T01 | MTR_5g089700 | 33.548 | 155 | 94 | 1 | 85 | 230 | 74 | 228 | 1.33e-23 | 97.1 |
MsG0880043459.01.T01 | MTR_4g057525 | 31.731 | 208 | 114 | 5 | 86 | 275 | 36 | 233 | 6.61e-23 | 95.5 |
MsG0880043459.01.T01 | MTR_1g079780 | 39.496 | 119 | 71 | 1 | 108 | 225 | 104 | 222 | 4.26e-22 | 94.7 |
MsG0880043459.01.T01 | MTR_1g032910 | 36.420 | 162 | 87 | 5 | 86 | 233 | 101 | 260 | 8.99e-22 | 93.6 |
MsG0880043459.01.T01 | MTR_1g053685 | 32.704 | 159 | 98 | 2 | 86 | 235 | 85 | 243 | 2.14e-21 | 92.0 |
MsG0880043459.01.T01 | MTR_1g061530 | 41.600 | 125 | 69 | 2 | 116 | 236 | 144 | 268 | 9.10e-21 | 91.7 |
MsG0880043459.01.T01 | MTR_6g061670 | 40.517 | 116 | 66 | 2 | 113 | 225 | 130 | 245 | 4.11e-19 | 86.3 |
MsG0880043459.01.T01 | MTR_6g061670 | 40.517 | 116 | 66 | 2 | 113 | 225 | 125 | 240 | 5.41e-19 | 85.9 |
MsG0880043459.01.T01 | MTR_5g089090 | 35.811 | 148 | 89 | 1 | 86 | 227 | 28 | 175 | 8.48e-19 | 83.2 |
MsG0880043459.01.T01 | MTR_8g098390 | 40.323 | 124 | 70 | 3 | 105 | 225 | 158 | 280 | 2.32e-18 | 84.7 |
MsG0880043459.01.T01 | MTR_1g076710 | 43.966 | 116 | 61 | 2 | 113 | 225 | 134 | 248 | 4.30e-18 | 83.6 |
MsG0880043459.01.T01 | MTR_4g098460 | 37.838 | 148 | 75 | 4 | 86 | 225 | 57 | 195 | 9.38e-18 | 82.0 |
MsG0880043459.01.T01 | MTR_1g073870 | 42.857 | 154 | 40 | 5 | 83 | 235 | 48 | 154 | 1.49e-17 | 80.1 |
MsG0880043459.01.T01 | MTR_7g116320 | 38.938 | 113 | 69 | 0 | 113 | 225 | 143 | 255 | 2.92e-17 | 81.6 |
MsG0880043459.01.T01 | MTR_7g077120 | 36.301 | 146 | 87 | 2 | 86 | 225 | 127 | 272 | 4.21e-17 | 80.9 |
MsG0880043459.01.T01 | MTR_8g036160 | 44.737 | 114 | 59 | 1 | 116 | 225 | 145 | 258 | 4.26e-17 | 81.3 |
MsG0880043459.01.T01 | MTR_7g074935 | 46.903 | 113 | 57 | 1 | 116 | 225 | 130 | 242 | 5.58e-17 | 80.5 |
MsG0880043459.01.T01 | MTR_7g116320 | 38.400 | 125 | 73 | 1 | 113 | 233 | 143 | 267 | 2.51e-16 | 77.8 |
MsG0880043459.01.T01 | MTR_4g069110 | 41.053 | 95 | 56 | 0 | 86 | 180 | 34 | 128 | 2.59e-16 | 75.9 |
MsG0880043459.01.T01 | MTR_4g098460 | 36.842 | 152 | 76 | 4 | 86 | 225 | 57 | 200 | 5.80e-16 | 77.0 |
MsG0880043459.01.T01 | MTR_8g031100 | 32.512 | 203 | 126 | 3 | 83 | 274 | 122 | 324 | 7.56e-16 | 77.4 |
MsG0880043459.01.T01 | MTR_8g078930 | 36.508 | 126 | 70 | 3 | 117 | 233 | 5 | 129 | 5.99e-15 | 71.6 |
MsG0880043459.01.T01 | MTR_4g055813 | 34.091 | 132 | 85 | 2 | 112 | 241 | 18 | 149 | 1.06e-14 | 73.2 |
MsG0880043459.01.T01 | MTR_5g011680 | 33.871 | 124 | 75 | 2 | 116 | 232 | 145 | 268 | 1.27e-14 | 73.2 |
MsG0880043459.01.T01 | MTR_4g101990 | 50.746 | 67 | 33 | 0 | 116 | 182 | 147 | 213 | 4.03e-14 | 72.0 |
MsG0880043459.01.T01 | MTR_5g011610 | 34.307 | 137 | 84 | 4 | 110 | 243 | 53 | 186 | 9.11e-14 | 71.2 |
MsG0880043459.01.T01 | MTR_5g011620 | 35.780 | 109 | 68 | 1 | 117 | 225 | 119 | 225 | 1.34e-13 | 71.6 |
MsG0880043459.01.T01 | MTR_4g055803 | 38.983 | 118 | 62 | 3 | 116 | 225 | 128 | 243 | 2.64e-13 | 70.5 |
MsG0880043459.01.T01 | MTR_1g071850 | 34.965 | 143 | 65 | 3 | 93 | 235 | 37 | 151 | 3.01e-13 | 67.8 |
MsG0880043459.01.T01 | MTR_4g055833 | 32.857 | 140 | 88 | 2 | 112 | 245 | 121 | 260 | 9.44e-13 | 68.2 |
MsG0880043459.01.T01 | MTR_6g060670 | 35.455 | 110 | 69 | 2 | 116 | 225 | 180 | 287 | 7.45e-12 | 65.5 |
MsG0880043459.01.T01 | MTR_3g116100 | 26.180 | 233 | 125 | 8 | 85 | 278 | 92 | 316 | 2.19e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043459.01.T01 | AT2G45430 | 64.815 | 324 | 90 | 10 | 1 | 307 | 1 | 317 | 2.82e-91 | 274 |
MsG0880043459.01.T01 | AT3G60870 | 54.870 | 308 | 95 | 10 | 1 | 307 | 1 | 265 | 7.93e-87 | 261 |
MsG0880043459.01.T01 | AT4G22810 | 58.025 | 324 | 98 | 10 | 10 | 307 | 13 | 324 | 4.45e-80 | 246 |
MsG0880043459.01.T01 | AT2G42940 | 58.036 | 224 | 73 | 3 | 82 | 304 | 49 | 252 | 6.74e-75 | 230 |
MsG0880043459.01.T01 | AT4G12050 | 58.419 | 291 | 96 | 7 | 34 | 307 | 57 | 339 | 3.86e-74 | 231 |
MsG0880043459.01.T01 | AT2G35270 | 72.078 | 154 | 43 | 0 | 86 | 239 | 78 | 231 | 2.75e-71 | 222 |
MsG0880043459.01.T01 | AT1G76500 | 68.485 | 165 | 43 | 1 | 82 | 237 | 68 | 232 | 6.13e-67 | 211 |
MsG0880043459.01.T01 | AT4G14465 | 68.590 | 156 | 49 | 0 | 84 | 239 | 65 | 220 | 4.16e-64 | 204 |
MsG0880043459.01.T01 | AT4G17800 | 57.009 | 214 | 79 | 2 | 95 | 307 | 91 | 292 | 5.17e-64 | 204 |
MsG0880043459.01.T01 | AT3G04570 | 71.519 | 158 | 37 | 1 | 86 | 235 | 80 | 237 | 2.25e-62 | 200 |
MsG0880043459.01.T01 | AT5G49700 | 51.829 | 164 | 72 | 2 | 83 | 239 | 53 | 216 | 9.16e-56 | 182 |
MsG0880043459.01.T01 | AT4G35390 | 73.333 | 150 | 38 | 1 | 86 | 233 | 63 | 212 | 4.18e-55 | 181 |
MsG0880043459.01.T01 | AT1G20900 | 69.375 | 160 | 40 | 1 | 85 | 235 | 85 | 244 | 3.84e-52 | 174 |
MsG0880043459.01.T01 | AT3G55560 | 54.425 | 226 | 78 | 6 | 12 | 235 | 36 | 238 | 4.62e-51 | 171 |
MsG0880043459.01.T01 | AT1G14490 | 43.216 | 199 | 104 | 3 | 87 | 278 | 6 | 202 | 4.88e-42 | 144 |
MsG0880043459.01.T01 | AT1G14490 | 43.216 | 199 | 104 | 3 | 87 | 278 | 25 | 221 | 8.25e-42 | 144 |
MsG0880043459.01.T01 | AT2G33620 | 40.113 | 177 | 94 | 4 | 80 | 253 | 131 | 298 | 6.95e-24 | 100 |
MsG0880043459.01.T01 | AT2G33620 | 40.113 | 177 | 94 | 4 | 80 | 253 | 131 | 298 | 6.95e-24 | 100 |
MsG0880043459.01.T01 | AT2G33620 | 40.113 | 177 | 94 | 4 | 80 | 253 | 131 | 298 | 6.95e-24 | 100 |
MsG0880043459.01.T01 | AT2G33620 | 40.113 | 177 | 94 | 4 | 80 | 253 | 131 | 298 | 6.95e-24 | 100 |
MsG0880043459.01.T01 | AT1G63470 | 41.096 | 146 | 79 | 3 | 86 | 225 | 147 | 291 | 2.65e-23 | 99.0 |
MsG0880043459.01.T01 | AT4G17950 | 37.696 | 191 | 104 | 4 | 86 | 263 | 196 | 384 | 2.21e-22 | 97.1 |
MsG0880043459.01.T01 | AT5G51590 | 42.478 | 113 | 62 | 1 | 116 | 225 | 181 | 293 | 5.02e-22 | 95.9 |
MsG0880043459.01.T01 | AT5G62260 | 39.516 | 124 | 72 | 1 | 113 | 233 | 160 | 283 | 7.98e-22 | 93.6 |
MsG0880043459.01.T01 | AT4G12080 | 42.478 | 113 | 62 | 1 | 116 | 225 | 173 | 285 | 1.13e-21 | 94.0 |
MsG0880043459.01.T01 | AT4G25320 | 42.478 | 113 | 62 | 1 | 116 | 225 | 169 | 281 | 1.26e-21 | 94.7 |
MsG0880043459.01.T01 | AT5G62260 | 42.241 | 116 | 64 | 1 | 113 | 225 | 160 | 275 | 1.38e-21 | 94.4 |
MsG0880043459.01.T01 | AT5G62260 | 42.241 | 116 | 64 | 1 | 113 | 225 | 160 | 275 | 1.38e-21 | 94.4 |
MsG0880043459.01.T01 | AT3G04590 | 37.273 | 110 | 69 | 0 | 116 | 225 | 174 | 283 | 7.55e-21 | 92.4 |
MsG0880043459.01.T01 | AT3G04590 | 37.273 | 110 | 69 | 0 | 116 | 225 | 174 | 283 | 1.45e-20 | 90.5 |
MsG0880043459.01.T01 | AT2G45850 | 37.427 | 171 | 89 | 5 | 86 | 244 | 132 | 296 | 1.72e-20 | 90.5 |
MsG0880043459.01.T01 | AT2G45850 | 37.427 | 171 | 89 | 5 | 86 | 244 | 132 | 296 | 1.72e-20 | 90.5 |
MsG0880043459.01.T01 | AT2G45850 | 38.158 | 152 | 76 | 5 | 86 | 225 | 132 | 277 | 6.34e-19 | 85.1 |
MsG0880043459.01.T01 | AT4G00200 | 45.133 | 113 | 59 | 1 | 116 | 225 | 126 | 238 | 2.44e-16 | 78.6 |
MsG0880043459.01.T01 | AT4G00200 | 45.133 | 113 | 59 | 1 | 116 | 225 | 126 | 238 | 2.44e-16 | 78.6 |
MsG0880043459.01.T01 | AT3G61310 | 31.111 | 225 | 129 | 5 | 86 | 304 | 134 | 338 | 1.28e-15 | 76.6 |
MsG0880043459.01.T01 | AT1G63480 | 34.247 | 146 | 89 | 3 | 86 | 225 | 130 | 274 | 1.62e-15 | 76.6 |
MsG0880043459.01.T01 | AT1G63480 | 34.247 | 146 | 89 | 3 | 86 | 225 | 130 | 274 | 1.62e-15 | 76.6 |
MsG0880043459.01.T01 | AT1G63480 | 34.247 | 146 | 89 | 3 | 86 | 225 | 124 | 268 | 1.83e-15 | 76.3 |
MsG0880043459.01.T01 | AT1G63480 | 34.247 | 146 | 89 | 3 | 86 | 225 | 124 | 268 | 1.83e-15 | 76.3 |
MsG0880043459.01.T01 | AT1G63480 | 34.247 | 146 | 89 | 3 | 86 | 225 | 124 | 268 | 1.83e-15 | 76.3 |
MsG0880043459.01.T01 | AT1G63480 | 34.247 | 146 | 89 | 3 | 86 | 225 | 124 | 268 | 1.83e-15 | 76.3 |
MsG0880043459.01.T01 | AT1G63480 | 34.247 | 146 | 89 | 3 | 86 | 225 | 124 | 268 | 1.83e-15 | 76.3 |
MsG0880043459.01.T01 | AT5G46640 | 44.792 | 96 | 51 | 1 | 86 | 181 | 155 | 248 | 9.65e-15 | 74.3 |
MsG0880043459.01.T01 | AT4G22770 | 39.823 | 113 | 65 | 1 | 116 | 225 | 153 | 265 | 3.58e-14 | 72.4 |
MsG0880043459.01.T01 | AT4G22770 | 39.823 | 113 | 65 | 1 | 116 | 225 | 153 | 265 | 3.58e-14 | 72.4 |
Find 115 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTACCAGCTGAGGGTTAT+TGG | 0.236815 | 8:-25108982 | MsG0880043459.01.T01:CDS |
CTACAAGTTGTTGCTGTTGC+TGG | 0.255008 | 8:+25109065 | None:intergenic |
ATTACCAGCTGAGGGTTATT+GGG | 0.283232 | 8:-25108981 | MsG0880043459.01.T01:CDS |
AATAACCCTCAGCTGGTAAT+TGG | 0.299906 | 8:+25108984 | None:intergenic |
GTGCCAGGAAATGGAGGGTT+AGG | 0.321400 | 8:-25109127 | MsG0880043459.01.T01:CDS |
GACCCTAACCCTCCATTTCC+TGG | 0.349826 | 8:+25109124 | None:intergenic |
CCATTTCCTGGCACATTCAC+TGG | 0.353925 | 8:+25109136 | None:intergenic |
GTGGGACCGTTGTTGGCTTC+CGG | 0.360811 | 8:-25109232 | MsG0880043459.01.T01:CDS |
GAGCGTGGTGGGACCGTTGT+TGG | 0.376140 | 8:-25109239 | MsG0880043459.01.T01:CDS |
TGTTGACTTCCCATGGTTCC+CGG | 0.379448 | 8:+25109100 | None:intergenic |
CCAGTGAATGTGCCAGGAAA+TGG | 0.383912 | 8:-25109136 | MsG0880043459.01.T01:CDS |
TTCGAGATACTATCCTTATC+TGG | 0.384098 | 8:-25109346 | MsG0880043459.01.T01:CDS |
GTTGTTCCTCTTCGTTGGTT+TGG | 0.386217 | 8:+25109764 | None:intergenic |
AAATGGAGGGTTAGGGTCAC+CGG | 0.387872 | 8:-25109119 | MsG0880043459.01.T01:CDS |
TTCCGGACCGGTTGTTATCA+TGG | 0.389245 | 8:-25109215 | MsG0880043459.01.T01:CDS |
CTGGTGGAGCAGGCGGCGGC+AGG | 0.390554 | 8:+25109317 | None:intergenic |
GTTATCATGGCAGCTTCCTT+TGG | 0.391274 | 8:-25109202 | MsG0880043459.01.T01:CDS |
GAACCTGCTGGTCTTCCTCT+TGG | 0.392781 | 8:+25109595 | None:intergenic |
GTCTGCATCCTTAGCGGAAG+TGG | 0.397268 | 8:-25109436 | MsG0880043459.01.T01:CDS |
CTGCTGTTGTTGACTTCCCA+TGG | 0.408503 | 8:+25109093 | None:intergenic |
GGTGGTTGGTGTGAAATTGA+TGG | 0.411727 | 8:+25109785 | None:intergenic |
CCTGCTCCACCAGCGGCGTC+AGG | 0.417474 | 8:-25109307 | MsG0880043459.01.T01:CDS |
CTCTTCGTTGGTTTGGTGGT+TGG | 0.418891 | 8:+25109771 | None:intergenic |
TGGAAAAGTGATGTAGCATT+AGG | 0.427339 | 8:+25109037 | None:intergenic |
CCTGACGCCGCTGGTGGAGC+AGG | 0.427453 | 8:+25109307 | None:intergenic |
TTGTCCACCAGCTAGATATA+TGG | 0.434432 | 8:+25109279 | None:intergenic |
GGAGGAAGTGGTGGTGAGAT+GGG | 0.435031 | 8:-25109625 | MsG0880043459.01.T01:CDS |
GGTGTTTCTTCATCTTCTAA+AGG | 0.435106 | 8:+25109157 | None:intergenic |
ACCGTTGTTGGCTTCCGGAC+CGG | 0.435941 | 8:-25109227 | MsG0880043459.01.T01:CDS |
GCCGCTGGTGGAGCAGGCGG+CGG | 0.437684 | 8:+25109313 | None:intergenic |
CTGTCCCTCGTGATGATGAT+AGG | 0.450585 | 8:+25109553 | None:intergenic |
CTCCGTCAACCAGCATCGCC+TGG | 0.453764 | 8:-25109394 | MsG0880043459.01.T01:CDS |
TGGAGGAAGTGGTGGTGAGA+TGG | 0.454468 | 8:-25109626 | MsG0880043459.01.T01:CDS |
ACTTTGTTGTTCCTCTTCGT+TGG | 0.455028 | 8:+25109759 | None:intergenic |
TGAAGGTCTCTAGTGAGAAA+TGG | 0.456542 | 8:+25109820 | None:intergenic |
GTGAGAAATGGAGGCGGAAG+AGG | 0.460334 | 8:+25109832 | None:intergenic |
GGAAAAGATGACGGCGGTAG+CGG | 0.464100 | 8:-25109658 | MsG0880043459.01.T01:CDS |
GACGGCGGTAGCGGAAGTGC+TGG | 0.483545 | 8:-25109649 | MsG0880043459.01.T01:CDS |
GTGATGATGATAGGTGGCTT+TGG | 0.489167 | 8:+25109562 | None:intergenic |
GTCGTCGGTGGGAGCGTGGT+GGG | 0.489586 | 8:-25109250 | MsG0880043459.01.T01:CDS |
AACACTCCCACCGGAGGAGA+AGG | 0.494922 | 8:-25109679 | MsG0880043459.01.T01:CDS |
GGAAGTGCTGGTGGAGGAAG+TGG | 0.507816 | 8:-25109637 | MsG0880043459.01.T01:CDS |
GTTCCTCTTCGTTGGTTTGG+TGG | 0.510018 | 8:+25109767 | None:intergenic |
TGCCATGATAACAACCGGTC+CGG | 0.511741 | 8:+25109213 | None:intergenic |
GAAGCTGCCATGATAACAAC+CGG | 0.512466 | 8:+25109208 | None:intergenic |
GTTAGGGTCACCGGGAACCA+TGG | 0.515128 | 8:-25109110 | MsG0880043459.01.T01:CDS |
CAACTTCCATCACGTGGGAT+CGG | 0.516425 | 8:+25109518 | None:intergenic |
CGTGGTGTCTGCATCCTTAG+CGG | 0.517651 | 8:-25109442 | MsG0880043459.01.T01:CDS |
CACCAGGCGATGCTGGTTGA+CGG | 0.520951 | 8:+25109392 | None:intergenic |
ACTACCGCACCAGGCGATGC+TGG | 0.521135 | 8:+25109385 | None:intergenic |
AGACCAAGAGGAAGACCAGC+AGG | 0.525862 | 8:-25109598 | MsG0880043459.01.T01:CDS |
ACAGGTCGTCGGTGGGAGCG+TGG | 0.529478 | 8:-25109254 | MsG0880043459.01.T01:CDS |
TTGGAAATGCTGCTTATGAA+AGG | 0.529919 | 8:-25109183 | MsG0880043459.01.T01:CDS |
GACGGCAACAACACTCCCAC+CGG | 0.530783 | 8:-25109688 | MsG0880043459.01.T01:CDS |
TTAGGGTCACCGGGAACCAT+GGG | 0.531803 | 8:-25109109 | MsG0880043459.01.T01:CDS |
GAAACACCAGTGAATGTGCC+AGG | 0.532629 | 8:-25109142 | MsG0880043459.01.T01:CDS |
CACGTGATGGAAGTTGCAAA+TGG | 0.532739 | 8:-25109511 | MsG0880043459.01.T01:CDS |
TTCATGCCAATTACCAGCTG+AGG | 0.532750 | 8:-25108990 | MsG0880043459.01.T01:CDS |
TCTAGCTGGTGGACAAGGAC+AGG | 0.533824 | 8:-25109272 | MsG0880043459.01.T01:CDS |
TGACGGTCCCACTTCCGCTA+AGG | 0.536192 | 8:+25109428 | None:intergenic |
GCTAATCCTGACGCCGCTGG+TGG | 0.537711 | 8:+25109301 | None:intergenic |
GGTGCGGTAGTCACACTTCA+CGG | 0.538196 | 8:-25109373 | MsG0880043459.01.T01:CDS |
GGACAAGGACAGGTCGTCGG+TGG | 0.538200 | 8:-25109262 | MsG0880043459.01.T01:CDS |
GGCGGTAGCGGAAGTGCTGG+TGG | 0.543536 | 8:-25109646 | MsG0880043459.01.T01:CDS |
CCACCCCAATAACCCTCAGC+TGG | 0.544497 | 8:+25108977 | None:intergenic |
TGCCAGGAAATGGAGGGTTA+GGG | 0.548211 | 8:-25109126 | MsG0880043459.01.T01:CDS |
CGGCAGGAAAGAGCCAGATA+AGG | 0.551698 | 8:+25109333 | None:intergenic |
ATATATCTAGCTGGTGGACA+AGG | 0.552899 | 8:-25109277 | MsG0880043459.01.T01:CDS |
TGAAGTGTGACTACCGCACC+AGG | 0.554425 | 8:+25109376 | None:intergenic |
TGCAAATGGATGTGACATCA+TGG | 0.561346 | 8:-25109497 | MsG0880043459.01.T01:CDS |
GGATTAGCCATATATCTAGC+TGG | 0.562049 | 8:-25109286 | MsG0880043459.01.T01:CDS |
GGTCGTCGGTGGGAGCGTGG+TGG | 0.562103 | 8:-25109251 | MsG0880043459.01.T01:CDS |
GTGAATGTGCCAGGAAATGG+AGG | 0.571584 | 8:-25109133 | MsG0880043459.01.T01:CDS |
CCAGCTGAGGGTTATTGGGG+TGG | 0.572923 | 8:-25108977 | MsG0880043459.01.T01:CDS |
CGAGAACGAAACAACGAAGA+CGG | 0.574284 | 8:-25109706 | MsG0880043459.01.T01:CDS |
TTACCAGCTGAGGGTTATTG+GGG | 0.574478 | 8:-25108980 | MsG0880043459.01.T01:CDS |
CATTTGCAACTTCCATCACG+TGG | 0.576032 | 8:+25109512 | None:intergenic |
CAACCACCAAACCAACGAAG+AGG | 0.578019 | 8:-25109770 | MsG0880043459.01.T01:CDS |
GACGCCGCTGGTGGAGCAGG+CGG | 0.578168 | 8:+25109310 | None:intergenic |
ATGGCTAATCCTGACGCCGC+TGG | 0.580569 | 8:+25109298 | None:intergenic |
CGCACTCCGATCCCACGTGA+TGG | 0.581464 | 8:-25109524 | MsG0880043459.01.T01:CDS |
TGACGGTCTTTGCGCGAAGG+AGG | 0.585381 | 8:-25109468 | MsG0880043459.01.T01:CDS |
TCAACCAGCATCGCCTGGTG+CGG | 0.586124 | 8:-25109389 | MsG0880043459.01.T01:CDS |
AATGGAGGGTTAGGGTCACC+GGG | 0.588273 | 8:-25109118 | MsG0880043459.01.T01:CDS |
GACAAGGACAGGTCGTCGGT+GGG | 0.588517 | 8:-25109261 | MsG0880043459.01.T01:CDS |
GTGTGACGGTCTTTGCGCGA+AGG | 0.589217 | 8:-25109471 | MsG0880043459.01.T01:CDS |
GAGGAACAACAAAGTGGCAA+TGG | 0.592421 | 8:-25109751 | MsG0880043459.01.T01:CDS |
GCCGCCGCCTGCTCCACCAG+CGG | 0.593837 | 8:-25109314 | MsG0880043459.01.T01:CDS |
GGTAGCGGAAGTGCTGGTGG+AGG | 0.596453 | 8:-25109643 | MsG0880043459.01.T01:CDS |
TTCATAAGCAGCATTTCCAA+AGG | 0.598798 | 8:+25109186 | None:intergenic |
TCATGCCAATTACCAGCTGA+GGG | 0.610376 | 8:-25108989 | MsG0880043459.01.T01:CDS |
GGCAACAACACTCCCACCGG+AGG | 0.610978 | 8:-25109685 | MsG0880043459.01.T01:CDS |
TCTGCATCCTTAGCGGAAGT+GGG | 0.612016 | 8:-25109435 | MsG0880043459.01.T01:CDS |
ACGGAGAGTCACGTTTGTGA+CGG | 0.630141 | 8:+25109411 | None:intergenic |
GGTGGACAAGGACAGGTCGT+CGG | 0.631663 | 8:-25109265 | MsG0880043459.01.T01:CDS |
GGCAATGGTAACTTAAGCCG+AGG | 0.631690 | 8:-25109736 | MsG0880043459.01.T01:CDS |
GAGATGGGAAGAAGACCAAG+AGG | 0.634395 | 8:-25109610 | MsG0880043459.01.T01:CDS |
TTAGCCATATATCTAGCTGG+TGG | 0.635384 | 8:-25109283 | MsG0880043459.01.T01:CDS |
GATGGTGAGGATGAAGATGA+AGG | 0.638930 | 8:+25109803 | None:intergenic |
AGTGCTGGTGGAGGAAGTGG+TGG | 0.643608 | 8:-25109634 | MsG0880043459.01.T01:CDS |
GGAGGAGAAGGAAAAGATGA+CGG | 0.644182 | 8:-25109667 | MsG0880043459.01.T01:CDS |
TTGGTGTGAAATTGATGGTG+AGG | 0.647165 | 8:+25109790 | None:intergenic |
AACGAAGAGGAACAACAAAG+TGG | 0.649911 | 8:-25109757 | MsG0880043459.01.T01:CDS |
ACCGGTCCGGAAGCCAACAA+CGG | 0.661651 | 8:+25109226 | None:intergenic |
ATCATGGATCAAGTAGCTCA+AGG | 0.665760 | 8:-25109859 | MsG0880043459.01.T01:CDS |
TCCCTCGTGATGATGATAGG+TGG | 0.666765 | 8:+25109556 | None:intergenic |
AGGTCTCTAGTGAGAAATGG+AGG | 0.671238 | 8:+25109823 | None:intergenic |
TCTCTAGTGAGAAATGGAGG+CGG | 0.676073 | 8:+25109826 | None:intergenic |
ATTTGCAACTTCCATCACGT+GGG | 0.680861 | 8:+25109513 | None:intergenic |
AGCCACCTATCATCATCACG+AGG | 0.696192 | 8:-25109558 | MsG0880043459.01.T01:CDS |
TTTGCGCGAAGGAGGCAGCG+TGG | 0.709250 | 8:-25109460 | MsG0880043459.01.T01:CDS |
GCCACCTATCATCATCACGA+GGG | 0.714818 | 8:-25109557 | MsG0880043459.01.T01:CDS |
TGAATGTGCCAGGAAATGGA+GGG | 0.719115 | 8:-25109132 | MsG0880043459.01.T01:CDS |
TGACATCATGGAAAGTGTGA+CGG | 0.725106 | 8:-25109485 | MsG0880043459.01.T01:CDS |
GGAGAAGGAAAAGATGACGG+CGG | 0.751070 | 8:-25109664 | MsG0880043459.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | CATGAATTGAGAAGATTTTG+AGG | + | Chr8:25109807-25109826 | None:intergenic | 30.0% |
GGTGTTTCTTCATCTTCTAA+AGG | + | Chr8:25109657-25109676 | None:intergenic | 35.0% | |
TGGAAAAGTGATGTAGCATT+AGG | + | Chr8:25109777-25109796 | None:intergenic | 35.0% | |
TTCATAAGCAGCATTTCCAA+AGG | + | Chr8:25109628-25109647 | None:intergenic | 35.0% | |
TTCGAGATACTATCCTTATC+TGG | - | Chr8:25109465-25109484 | MsG0880043459.01.T01:CDS | 35.0% | |
! | TTGGAAATGCTGCTTATGAA+AGG | - | Chr8:25109628-25109647 | MsG0880043459.01.T01:CDS | 35.0% |
!! | AATGCTACATCACTTTTCCA+TGG | - | Chr8:25109777-25109796 | MsG0880043459.01.T01:CDS | 35.0% |
AACGAAGAGGAACAACAAAG+TGG | - | Chr8:25109054-25109073 | MsG0880043459.01.T01:CDS | 40.0% | |
AATAACCCTCAGCTGGTAAT+TGG | + | Chr8:25109830-25109849 | None:intergenic | 40.0% | |
AATTACCAGCTGAGGGTTAT+TGG | - | Chr8:25109829-25109848 | MsG0880043459.01.T01:CDS | 40.0% | |
ATTACCAGCTGAGGGTTATT+GGG | - | Chr8:25109830-25109849 | MsG0880043459.01.T01:CDS | 40.0% | |
ATTTGCAACTTCCATCACGT+GGG | + | Chr8:25109301-25109320 | None:intergenic | 40.0% | |
TGAAGGTCTCTAGTGAGAAA+TGG | + | Chr8:25108994-25109013 | None:intergenic | 40.0% | |
TGCAAATGGATGTGACATCA+TGG | - | Chr8:25109314-25109333 | MsG0880043459.01.T01:CDS | 40.0% | |
TTAGCCATATATCTAGCTGG+TGG | - | Chr8:25109528-25109547 | MsG0880043459.01.T01:CDS | 40.0% | |
TTGTCCACCAGCTAGATATA+TGG | + | Chr8:25109535-25109554 | None:intergenic | 40.0% | |
! | ATATATCTAGCTGGTGGACA+AGG | - | Chr8:25109534-25109553 | MsG0880043459.01.T01:CDS | 40.0% |
! | TGACATCATGGAAAGTGTGA+CGG | - | Chr8:25109326-25109345 | MsG0880043459.01.T01:CDS | 40.0% |
!! | ACTTTGTTGTTCCTCTTCGT+TGG | + | Chr8:25109055-25109074 | None:intergenic | 40.0% |
!! | CGTTGTTTCGTTCTCGTTTT+TGG | + | Chr8:25109101-25109120 | None:intergenic | 40.0% |
!! | GAAGATTTTGAGGAACTCCA+TGG | + | Chr8:25109797-25109816 | None:intergenic | 40.0% |
!! | GGATTAGCCATATATCTAGC+TGG | - | Chr8:25109525-25109544 | MsG0880043459.01.T01:CDS | 40.0% |
!! | TTGGTGTGAAATTGATGGTG+AGG | + | Chr8:25109024-25109043 | None:intergenic | 40.0% |
AGGTCTCTAGTGAGAAATGG+AGG | + | Chr8:25108991-25109010 | None:intergenic | 45.0% | |
CATTTGCAACTTCCATCACG+TGG | + | Chr8:25109302-25109321 | None:intergenic | 45.0% | |
CGAGAACGAAACAACGAAGA+CGG | - | Chr8:25109105-25109124 | MsG0880043459.01.T01:CDS | 45.0% | |
GAAGCTGCCATGATAACAAC+CGG | + | Chr8:25109606-25109625 | None:intergenic | 45.0% | |
GAGGAACAACAAAGTGGCAA+TGG | - | Chr8:25109060-25109079 | MsG0880043459.01.T01:CDS | 45.0% | |
GATGGTGAGGATGAAGATGA+AGG | + | Chr8:25109011-25109030 | None:intergenic | 45.0% | |
GGAGGAGAAGGAAAAGATGA+CGG | - | Chr8:25109144-25109163 | MsG0880043459.01.T01:CDS | 45.0% | |
GTTATCATGGCAGCTTCCTT+TGG | - | Chr8:25109609-25109628 | MsG0880043459.01.T01:CDS | 45.0% | |
TCATGCCAATTACCAGCTGA+GGG | - | Chr8:25109822-25109841 | MsG0880043459.01.T01:CDS | 45.0% | |
TCTCTAGTGAGAAATGGAGG+CGG | + | Chr8:25108988-25109007 | None:intergenic | 45.0% | |
TGAATGTGCCAGGAAATGGA+GGG | - | Chr8:25109679-25109698 | MsG0880043459.01.T01:CDS | 45.0% | |
TTACCAGCTGAGGGTTATTG+GGG | - | Chr8:25109831-25109850 | MsG0880043459.01.T01:CDS | 45.0% | |
TTCATGCCAATTACCAGCTG+AGG | - | Chr8:25109821-25109840 | MsG0880043459.01.T01:CDS | 45.0% | |
! | CACGTGATGGAAGTTGCAAA+TGG | - | Chr8:25109300-25109319 | MsG0880043459.01.T01:CDS | 45.0% |
! | CTACAAGTTGTTGCTGTTGC+TGG | + | Chr8:25109749-25109768 | None:intergenic | 45.0% |
! | GGTGGTTGGTGTGAAATTGA+TGG | + | Chr8:25109029-25109048 | None:intergenic | 45.0% |
! | GTCATCTTTTCCTTCTCCTC+CGG | + | Chr8:25109145-25109164 | None:intergenic | 45.0% |
! | GTGATGATGATAGGTGGCTT+TGG | + | Chr8:25109252-25109271 | None:intergenic | 45.0% |
! | GTTGTTCCTCTTCGTTGGTT+TGG | + | Chr8:25109050-25109069 | None:intergenic | 45.0% |
!! | GGTTTGTTTTTCGAACCTGC+TGG | + | Chr8:25109231-25109250 | None:intergenic | 45.0% |
!!! | TTCGTTCTCGTTTTTGGCCT+CGG | + | Chr8:25109095-25109114 | None:intergenic | 45.0% |
AAATGGAGGGTTAGGGTCAC+CGG | - | Chr8:25109692-25109711 | MsG0880043459.01.T01:CDS | 50.0% | |
ACGGAGAGTCACGTTTGTGA+CGG | + | Chr8:25109403-25109422 | None:intergenic | 50.0% | |
AGCCACCTATCATCATCACG+AGG | - | Chr8:25109253-25109272 | MsG0880043459.01.T01:CDS | 50.0% | |
CAACCACCAAACCAACGAAG+AGG | - | Chr8:25109041-25109060 | MsG0880043459.01.T01:CDS | 50.0% | |
CAACTTCCATCACGTGGGAT+CGG | + | Chr8:25109296-25109315 | None:intergenic | 50.0% | |
CCAGTGAATGTGCCAGGAAA+TGG | - | Chr8:25109675-25109694 | MsG0880043459.01.T01:CDS | 50.0% | |
CCATTTCCTGGCACATTCAC+TGG | + | Chr8:25109678-25109697 | None:intergenic | 50.0% | |
GAAACACCAGTGAATGTGCC+AGG | - | Chr8:25109669-25109688 | MsG0880043459.01.T01:CDS | 50.0% | |
GAGATGGGAAGAAGACCAAG+AGG | - | Chr8:25109201-25109220 | MsG0880043459.01.T01:CDS | 50.0% | |
GCCACCTATCATCATCACGA+GGG | - | Chr8:25109254-25109273 | MsG0880043459.01.T01:CDS | 50.0% | |
GGCAATGGTAACTTAAGCCG+AGG | - | Chr8:25109075-25109094 | MsG0880043459.01.T01:CDS | 50.0% | |
GTGAATGTGCCAGGAAATGG+AGG | - | Chr8:25109678-25109697 | MsG0880043459.01.T01:CDS | 50.0% | |
TCTGCATCCTTAGCGGAAGT+GGG | - | Chr8:25109376-25109395 | MsG0880043459.01.T01:CDS | 50.0% | |
TGCCAGGAAATGGAGGGTTA+GGG | - | Chr8:25109685-25109704 | MsG0880043459.01.T01:CDS | 50.0% | |
TGCCATGATAACAACCGGTC+CGG | + | Chr8:25109601-25109620 | None:intergenic | 50.0% | |
TTCCGGACCGGTTGTTATCA+TGG | - | Chr8:25109596-25109615 | MsG0880043459.01.T01:CDS | 50.0% | |
! | ATCTTTTCCTTCTCCTCCGG+TGG | + | Chr8:25109142-25109161 | None:intergenic | 50.0% |
! | CTGTCCCTCGTGATGATGAT+AGG | + | Chr8:25109261-25109280 | None:intergenic | 50.0% |
! | GGAGAAGGAAAAGATGACGG+CGG | - | Chr8:25109147-25109166 | MsG0880043459.01.T01:CDS | 50.0% |
! | TCCCTCGTGATGATGATAGG+TGG | + | Chr8:25109258-25109277 | None:intergenic | 50.0% |
! | TCTTTTCCTTCTCCTCCGGT+GGG | + | Chr8:25109141-25109160 | None:intergenic | 50.0% |
!! | CTCTTCGTTGGTTTGGTGGT+TGG | + | Chr8:25109043-25109062 | None:intergenic | 50.0% |
!! | CTGCTGTTGTTGACTTCCCA+TGG | + | Chr8:25109721-25109740 | None:intergenic | 50.0% |
!! | GTTCCTCTTCGTTGGTTTGG+TGG | + | Chr8:25109047-25109066 | None:intergenic | 50.0% |
!! | TGTTGACTTCCCATGGTTCC+CGG | + | Chr8:25109714-25109733 | None:intergenic | 50.0% |
AATGGAGGGTTAGGGTCACC+GGG | - | Chr8:25109693-25109712 | MsG0880043459.01.T01:CDS | 55.0% | |
AGACCAAGAGGAAGACCAGC+AGG | - | Chr8:25109213-25109232 | MsG0880043459.01.T01:CDS | 55.0% | |
CGGCAGGAAAGAGCCAGATA+AGG | + | Chr8:25109481-25109500 | None:intergenic | 55.0% | |
CGTGGTGTCTGCATCCTTAG+CGG | - | Chr8:25109369-25109388 | MsG0880043459.01.T01:CDS | 55.0% | |
GACCCTAACCCTCCATTTCC+TGG | + | Chr8:25109690-25109709 | None:intergenic | 55.0% | |
GGTGCGGTAGTCACACTTCA+CGG | - | Chr8:25109438-25109457 | MsG0880043459.01.T01:CDS | 55.0% | |
GTCTGCATCCTTAGCGGAAG+TGG | - | Chr8:25109375-25109394 | MsG0880043459.01.T01:CDS | 55.0% | |
GTGAGAAATGGAGGCGGAAG+AGG | + | Chr8:25108982-25109001 | None:intergenic | 55.0% | |
GTGCCAGGAAATGGAGGGTT+AGG | - | Chr8:25109684-25109703 | MsG0880043459.01.T01:CDS | 55.0% | |
TGAAGTGTGACTACCGCACC+AGG | + | Chr8:25109438-25109457 | None:intergenic | 55.0% | |
TTAGGGTCACCGGGAACCAT+GGG | - | Chr8:25109702-25109721 | MsG0880043459.01.T01:CDS | 55.0% | |
! | GGAAAAGATGACGGCGGTAG+CGG | - | Chr8:25109153-25109172 | MsG0880043459.01.T01:CDS | 55.0% |
! | GGAGGAAGTGGTGGTGAGAT+GGG | - | Chr8:25109186-25109205 | MsG0880043459.01.T01:CDS | 55.0% |
! | TCTAGCTGGTGGACAAGGAC+AGG | - | Chr8:25109539-25109558 | MsG0880043459.01.T01:CDS | 55.0% |
! | TGGAGGAAGTGGTGGTGAGA+TGG | - | Chr8:25109185-25109204 | MsG0880043459.01.T01:CDS | 55.0% |
!! | GAACCTGCTGGTCTTCCTCT+TGG | + | Chr8:25109219-25109238 | None:intergenic | 55.0% |
AACACTCCCACCGGAGGAGA+AGG | - | Chr8:25109132-25109151 | MsG0880043459.01.T01:CDS | 60.0% | |
ACCGGTCCGGAAGCCAACAA+CGG | + | Chr8:25109588-25109607 | None:intergenic | 60.0% | |
ATGGCTAATCCTGACGCCGC+TGG | + | Chr8:25109516-25109535 | None:intergenic | 60.0% | |
CCACCCCAATAACCCTCAGC+TGG | + | Chr8:25109837-25109856 | None:intergenic | 60.0% | |
CCAGCTGAGGGTTATTGGGG+TGG | - | Chr8:25109834-25109853 | MsG0880043459.01.T01:CDS | 60.0% | |
GACAAGGACAGGTCGTCGGT+GGG | - | Chr8:25109550-25109569 | MsG0880043459.01.T01:CDS | 60.0% | |
GACGGCAACAACACTCCCAC+CGG | - | Chr8:25109123-25109142 | MsG0880043459.01.T01:CDS | 60.0% | |
GGTGGACAAGGACAGGTCGT+CGG | - | Chr8:25109546-25109565 | MsG0880043459.01.T01:CDS | 60.0% | |
GTGTGACGGTCTTTGCGCGA+AGG | - | Chr8:25109340-25109359 | MsG0880043459.01.T01:CDS | 60.0% | |
GTTAGGGTCACCGGGAACCA+TGG | - | Chr8:25109701-25109720 | MsG0880043459.01.T01:CDS | 60.0% | |
TCAACCAGCATCGCCTGGTG+CGG | - | Chr8:25109422-25109441 | MsG0880043459.01.T01:CDS | 60.0% | |
TGACGGTCCCACTTCCGCTA+AGG | + | Chr8:25109386-25109405 | None:intergenic | 60.0% | |
TGACGGTCTTTGCGCGAAGG+AGG | - | Chr8:25109343-25109362 | MsG0880043459.01.T01:CDS | 60.0% | |
! | CACCAGGCGATGCTGGTTGA+CGG | + | Chr8:25109422-25109441 | None:intergenic | 60.0% |
!! | ACCGTTGTTGGCTTCCGGAC+CGG | - | Chr8:25109584-25109603 | MsG0880043459.01.T01:CDS | 60.0% |
!! | AGTGCTGGTGGAGGAAGTGG+TGG | - | Chr8:25109177-25109196 | MsG0880043459.01.T01:CDS | 60.0% |
!! | GGAAGTGCTGGTGGAGGAAG+TGG | - | Chr8:25109174-25109193 | MsG0880043459.01.T01:CDS | 60.0% |
!! | GTGGGACCGTTGTTGGCTTC+CGG | - | Chr8:25109579-25109598 | MsG0880043459.01.T01:CDS | 60.0% |
ACTACCGCACCAGGCGATGC+TGG | + | Chr8:25109429-25109448 | None:intergenic | 65.0% | |
CGCACTCCGATCCCACGTGA+TGG | - | Chr8:25109287-25109306 | MsG0880043459.01.T01:CDS | 65.0% | |
CTCCGTCAACCAGCATCGCC+TGG | - | Chr8:25109417-25109436 | MsG0880043459.01.T01:CDS | 65.0% | |
GCTAATCCTGACGCCGCTGG+TGG | + | Chr8:25109513-25109532 | None:intergenic | 65.0% | |
GGACAAGGACAGGTCGTCGG+TGG | - | Chr8:25109549-25109568 | MsG0880043459.01.T01:CDS | 65.0% | |
GGCAACAACACTCCCACCGG+AGG | - | Chr8:25109126-25109145 | MsG0880043459.01.T01:CDS | 65.0% | |
TTTGCGCGAAGGAGGCAGCG+TGG | - | Chr8:25109351-25109370 | MsG0880043459.01.T01:CDS | 65.0% | |
! | GAGCGTGGTGGGACCGTTGT+TGG | - | Chr8:25109572-25109591 | MsG0880043459.01.T01:CDS | 65.0% |
!! | GGTAGCGGAAGTGCTGGTGG+AGG | - | Chr8:25109168-25109187 | MsG0880043459.01.T01:CDS | 65.0% |
ACAGGTCGTCGGTGGGAGCG+TGG | - | Chr8:25109557-25109576 | MsG0880043459.01.T01:CDS | 70.0% | |
! | GTCGTCGGTGGGAGCGTGGT+GGG | - | Chr8:25109561-25109580 | MsG0880043459.01.T01:CDS | 70.0% |
!! | GACGGCGGTAGCGGAAGTGC+TGG | - | Chr8:25109162-25109181 | MsG0880043459.01.T01:CDS | 70.0% |
!! | GGCGGTAGCGGAAGTGCTGG+TGG | - | Chr8:25109165-25109184 | MsG0880043459.01.T01:CDS | 70.0% |
CCTGACGCCGCTGGTGGAGC+AGG | + | Chr8:25109507-25109526 | None:intergenic | 75.0% | |
CCTGCTCCACCAGCGGCGTC+AGG | - | Chr8:25109504-25109523 | MsG0880043459.01.T01:CDS | 75.0% | |
GACGCCGCTGGTGGAGCAGG+CGG | + | Chr8:25109504-25109523 | None:intergenic | 75.0% | |
! | GGTCGTCGGTGGGAGCGTGG+TGG | - | Chr8:25109560-25109579 | MsG0880043459.01.T01:CDS | 75.0% |
! | CTGGTGGAGCAGGCGGCGGC+AGG | + | Chr8:25109497-25109516 | None:intergenic | 80.0% |
! | GCCGCCGCCTGCTCCACCAG+CGG | - | Chr8:25109497-25109516 | MsG0880043459.01.T01:CDS | 80.0% |
! | GCCGCTGGTGGAGCAGGCGG+CGG | + | Chr8:25109501-25109520 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 25108955 | 25109878 | 25108955 | ID=MsG0880043459.01;Name=MsG0880043459.01 |
Chr8 | mRNA | 25108955 | 25109878 | 25108955 | ID=MsG0880043459.01.T01;Parent=MsG0880043459.01;Name=MsG0880043459.01.T01;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|307 |
Chr8 | exon | 25108955 | 25109878 | 25108955 | ID=MsG0880043459.01.T01:exon:1116;Parent=MsG0880043459.01.T01 |
Chr8 | CDS | 25108955 | 25109878 | 25108955 | ID=MsG0880043459.01.T01:cds;Parent=MsG0880043459.01.T01 |
Gene Sequence |
Protein sequence |