Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010623.01.T01 | XP_003597042.1 | 62.771 | 231 | 34 | 4 | 1 | 180 | 3 | 232 | 4.22E-78 | 246 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010623.01.T01 | Q9FH37 | 43.269 | 104 | 22 | 2 | 76 | 142 | 58 | 161 | 7.76E-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010623.01.T01 | G7IKM3 | 62.771 | 231 | 34 | 4 | 1 | 180 | 3 | 232 | 2.02e-78 | 246 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0280010623.01.T01 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001503.01 | MsG0280010623.01 | 0.804365 | 2.237641e-49 | 1.151565e-46 |
| MsG0180001515.01 | MsG0280010623.01 | 0.815955 | 7.090792e-52 | 4.958439e-49 |
| MsG0180002006.01 | MsG0280010623.01 | 0.830620 | 2.649826e-55 | 2.806749e-52 |
| MsG0180002255.01 | MsG0280010623.01 | 0.806999 | 6.262324e-50 | 3.448371e-47 |
| MsG0180003320.01 | MsG0280010623.01 | 0.815305 | 9.897908e-52 | 6.799118e-49 |
| MsG0180003375.01 | MsG0280010623.01 | 0.840711 | 7.375326e-58 | 1.059476e-54 |
| MsG0180004059.01 | MsG0280010623.01 | 0.835491 | 1.626610e-56 | 1.992303e-53 |
| MsG0180004121.01 | MsG0280010623.01 | 0.812439 | 4.237558e-51 | 2.694586e-48 |
| MsG0180004424.01 | MsG0280010623.01 | 0.857261 | 1.841089e-62 | 4.516847e-59 |
| MsG0180005059.01 | MsG0280010623.01 | 0.834660 | 2.636446e-56 | 3.149270e-53 |
| MsG0180005080.01 | MsG0280010623.01 | 0.801145 | 1.033904e-48 | 4.901322e-46 |
| MsG0180005127.01 | MsG0280010623.01 | 0.821166 | 4.664385e-53 | 3.766194e-50 |
| MsG0180005130.01 | MsG0280010623.01 | 0.858759 | 6.605986e-63 | 1.704306e-59 |
| MsG0180005143.01 | MsG0280010623.01 | 0.859113 | 5.176505e-63 | 1.351692e-59 |
| MsG0180005146.01 | MsG0280010623.01 | 0.830249 | 3.265844e-55 | 3.422305e-52 |
| MsG0180005353.01 | MsG0280010623.01 | 0.846313 | 2.349422e-59 | 4.027144e-56 |
| MsG0180006010.01 | MsG0280010623.01 | 0.817357 | 3.438907e-52 | 2.498818e-49 |
| MsG0180006253.01 | MsG0280010623.01 | 0.876763 | 1.077807e-68 | 5.288623e-65 |
| MsG0280006316.01 | MsG0280010623.01 | 0.836725 | 7.908660e-57 | 1.005298e-53 |
| MsG0280010623.01 | MsG0280010926.01 | -0.810535 | 1.098554e-50 | 6.638756e-48 |
| MsG0280010623.01 | MsG0280011017.01 | 0.823720 | 1.189930e-53 | 1.032912e-50 |
| MsG0280010623.01 | MsG0380013212.01 | 0.833706 | 4.572675e-56 | 5.307991e-53 |
| MsG0280010623.01 | MsG0380013213.01 | 0.838162 | 3.387524e-57 | 4.498766e-54 |
| MsG0280010623.01 | MsG0380013226.01 | 0.821421 | 4.073983e-53 | 3.312929e-50 |
| MsG0280010623.01 | MsG0380013239.01 | 0.807082 | 6.013874e-50 | 3.318674e-47 |
| MsG0280010623.01 | MsG0380015496.01 | -0.811192 | 7.916494e-51 | 4.868624e-48 |
| MsG0280010623.01 | MsG0380016452.01 | -0.803989 | 2.678619e-49 | 1.365348e-46 |
| MsG0280010623.01 | MsG0380016458.01 | 0.842973 | 1.863827e-58 | 2.873388e-55 |
| MsG0280010623.01 | MsG0380017143.01 | -0.803725 | 3.039146e-49 | 1.538545e-46 |
| MsG0280010623.01 | MsG0380017200.01 | 0.900388 | 7.700139e-78 | 9.940311e-74 |
| MsG0280010623.01 | MsG0380017307.01 | 0.807498 | 4.909041e-50 | 2.738593e-47 |
| MsG0280010623.01 | MsG0380017620.01 | -0.804882 | 1.744961e-49 | 9.101614e-47 |
| MsG0280010623.01 | MsG0380017884.01 | -0.812036 | 5.188811e-51 | 3.263252e-48 |
| MsG0280010623.01 | MsG0380017976.01 | -0.807792 | 4.251922e-50 | 2.390170e-47 |
| MsG0280010623.01 | MsG0480018439.01 | 0.851114 | 1.095772e-60 | 2.194602e-57 |
| MsG0280010623.01 | MsG0480018559.01 | 0.829881 | 4.015827e-55 | 4.163964e-52 |
| MsG0280010623.01 | MsG0480018621.01 | 0.841764 | 3.897934e-58 | 5.785933e-55 |
| MsG0280010623.01 | MsG0480018622.01 | 0.805564 | 1.255981e-49 | 6.666201e-47 |
| MsG0280010623.01 | MsG0480018625.01 | 0.814938 | 1.193910e-51 | 8.119550e-49 |
| MsG0280010623.01 | MsG0480018692.01 | 0.854977 | 8.588260e-62 | 1.952570e-58 |
| MsG0280010623.01 | MsG0480018693.01 | 0.812340 | 4.453858e-51 | 2.824500e-48 |
| MsG0280010623.01 | MsG0480018697.01 | 0.817871 | 2.634065e-52 | 1.941155e-49 |
| MsG0280010623.01 | MsG0480019322.01 | 0.852851 | 3.518531e-61 | 7.453459e-58 |
| MsG0280010623.01 | MsG0480019325.01 | 0.819968 | 8.789136e-53 | 6.864644e-50 |
| MsG0280010623.01 | MsG0480019346.01 | 0.805994 | 1.020186e-49 | 5.475181e-47 |
| MsG0280010623.01 | MsG0480019666.01 | 0.802950 | 4.399079e-49 | 2.183108e-46 |
| MsG0280010623.01 | MsG0480020814.01 | 0.803942 | 2.739940e-49 | 1.394927e-46 |
| MsG0280010623.01 | MsG0480020888.01 | -0.809565 | 1.777318e-50 | 1.047063e-47 |
| MsG0280010623.01 | MsG0480021091.01 | 0.810492 | 1.122010e-50 | 6.772991e-48 |
| MsG0280010623.01 | MsG0480021129.01 | 0.809818 | 1.567898e-50 | 9.298922e-48 |
| MsG0280010623.01 | MsG0480021133.01 | 0.822670 | 2.092206e-53 | 1.762836e-50 |
| MsG0280010623.01 | MsG0480021234.01 | 0.805438 | 1.334641e-49 | 7.061010e-47 |
| MsG0280010623.01 | MsG0480023429.01 | 0.811093 | 8.317079e-51 | 5.101779e-48 |
| MsG0280010623.01 | MsG0580024782.01 | 0.835788 | 1.368396e-56 | 1.690997e-53 |
| MsG0280010623.01 | MsG0580024944.01 | -0.803268 | 3.781237e-49 | 1.891833e-46 |
| MsG0280010623.01 | MsG0580024994.01 | 0.843914 | 1.045114e-58 | 1.659912e-55 |
| MsG0280010623.01 | MsG0580025007.01 | 0.884025 | 2.726711e-71 | 1.770075e-67 |
| MsG0280010623.01 | MsG0580025023.01 | 0.828422 | 9.070633e-55 | 9.011915e-52 |
| MsG0280010623.01 | MsG0580025024.01 | 0.903556 | 3.069686e-79 | 4.567225e-75 |
| MsG0280010623.01 | MsG0580025193.01 | 0.807448 | 5.028794e-50 | 2.801769e-47 |
| MsG0280010623.01 | MsG0580026521.01 | 0.813242 | 2.826532e-51 | 1.835888e-48 |
| MsG0280010623.01 | MsG0580027751.01 | 0.819451 | 1.153632e-52 | 8.880932e-50 |
| MsG0280010623.01 | MsG0580027753.01 | 0.805728 | 1.160265e-49 | 6.184789e-47 |
| MsG0280010623.01 | MsG0580027776.01 | 0.852470 | 4.521752e-61 | 9.457682e-58 |
| MsG0280010623.01 | MsG0580027777.01 | 0.858627 | 7.235831e-63 | 1.858339e-59 |
| MsG0280010623.01 | MsG0580028587.01 | 0.812345 | 4.442461e-51 | 2.817684e-48 |
| MsG0280010623.01 | MsG0580029937.01 | 0.807041 | 6.135409e-50 | 3.382210e-47 |
| MsG0280010623.01 | MsG0580029938.01 | 0.814333 | 1.625055e-51 | 1.087318e-48 |
| MsG0280010623.01 | MsG0680031200.01 | 0.827132 | 1.851966e-54 | 1.771939e-51 |
| MsG0280010623.01 | MsG0680032026.01 | 0.853242 | 2.718939e-61 | 5.836652e-58 |
| MsG0280010623.01 | MsG0680032461.01 | 0.870937 | 1.000542e-66 | 3.963175e-63 |
| MsG0280010623.01 | MsG0680033347.01 | 0.812191 | 4.799602e-51 | 3.031560e-48 |
| MsG0280010623.01 | MsG0680034969.01 | 0.802656 | 5.057832e-49 | 2.491328e-46 |
| MsG0280010623.01 | MsG0680034974.01 | 0.826683 | 2.371592e-54 | 2.239676e-51 |
| MsG0280010623.01 | MsG0680034978.01 | 0.818497 | 1.900482e-52 | 1.424945e-49 |
| MsG0280010623.01 | MsG0780035932.01 | 0.847514 | 1.102349e-59 | 1.964144e-56 |
| MsG0280010623.01 | MsG0780036054.01 | 0.804032 | 2.624695e-49 | 1.339278e-46 |
| MsG0280010623.01 | MsG0780036258.01 | 0.802719 | 4.908956e-49 | 2.421999e-46 |
| MsG0280010623.01 | MsG0780036259.01 | 0.825491 | 4.552750e-54 | 4.155999e-51 |
| MsG0280010623.01 | MsG0780036260.01 | 0.825999 | 3.450787e-54 | 3.196125e-51 |
| MsG0280010623.01 | MsG0780036376.01 | 0.850622 | 1.507168e-60 | 2.970104e-57 |
| MsG0280010623.01 | MsG0780037436.01 | -0.800654 | 1.302178e-48 | 6.096691e-46 |
| MsG0280010623.01 | MsG0780038399.01 | 0.824209 | 9.138980e-54 | 8.042045e-51 |
| MsG0280010623.01 | MsG0780038519.01 | 0.800423 | 1.451274e-48 | 6.755261e-46 |
| MsG0280010623.01 | MsG0780039912.01 | 0.827895 | 1.214996e-54 | 1.188679e-51 |
| MsG0280010623.01 | MsG0780039923.01 | 0.843847 | 1.089431e-58 | 1.726652e-55 |
| MsG0280010623.01 | MsG0780040034.01 | 0.809735 | 1.633554e-50 | 9.667491e-48 |
| MsG0280010623.01 | MsG0780040035.01 | 0.845029 | 5.237707e-59 | 8.615486e-56 |
| MsG0280010623.01 | MsG0780040081.01 | 0.825514 | 4.497190e-54 | 4.107851e-51 |
| MsG0280010623.01 | MsG0780040670.01 | 0.840627 | 7.759921e-58 | 1.111813e-54 |
| MsG0280010623.01 | MsG0780040684.01 | -0.801134 | 1.039133e-48 | 4.924834e-46 |
| MsG0280010623.01 | MsG0780040719.01 | 0.828285 | 9.789931e-55 | 9.687171e-52 |
| MsG0280010623.01 | MsG0780040847.01 | 0.806431 | 8.252638e-50 | 4.478497e-47 |
| MsG0280010623.01 | MsG0780040991.01 | 0.823328 | 1.469323e-53 | 1.261155e-50 |
| MsG0280010623.01 | MsG0780041226.01 | 0.801163 | 1.025018e-48 | 4.861390e-46 |
| MsG0280010623.01 | MsG0780041447.01 | 0.834360 | 3.135818e-56 | 3.712735e-53 |
| MsG0280010623.01 | MsG0880042642.01 | 0.809759 | 1.614385e-50 | 9.560195e-48 |
| MsG0280010623.01 | MsG0880042728.01 | 0.817789 | 2.748464e-52 | 2.020961e-49 |
| MsG0280010623.01 | MsG0880042876.01 | -0.809200 | 2.128419e-50 | 1.241800e-47 |
| MsG0280010623.01 | MsG0880043459.01 | 0.817123 | 3.882166e-52 | 2.802832e-49 |
| MsG0280010623.01 | MsG0880044026.01 | 0.803052 | 4.189646e-49 | 2.084565e-46 |
| MsG0280010623.01 | MsG0880044312.01 | -0.804795 | 1.819457e-49 | 9.468422e-47 |
| MsG0280010623.01 | MsG0880044712.01 | 0.801116 | 1.048022e-48 | 4.964634e-46 |
| MsG0280010623.01 | MsG0880045854.01 | 0.811113 | 8.237119e-51 | 5.055276e-48 |
| MsG0280010623.01 | MsG0880046038.01 | 0.821798 | 3.334443e-53 | 2.740458e-50 |
| MsG0280010623.01 | MsG0880046166.01 | 0.811106 | 8.262313e-51 | 5.069878e-48 |
| MsG0280010623.01 | MsG0880046402.01 | 0.843411 | 1.424957e-58 | 2.227718e-55 |
| MsG0280010623.01 | MsG0880046403.01 | 0.844411 | 7.689568e-59 | 1.240309e-55 |
| MsG0280010623.01 | MsG0880046759.01 | -0.809971 | 1.453511e-50 | 8.655217e-48 |
| MsG0280010623.01 | MsG0880046768.01 | 0.802296 | 6.000573e-49 | 2.928913e-46 |
| MsG0280010623.01 | MsG0880047312.01 | 0.879663 | 1.037020e-69 | 5.670397e-66 |
| MsG0280010623.01 | MsG0880047450.01 | 0.830678 | 2.564537e-55 | 2.721196e-52 |
| MsG0280010623.01 | MsG0880047460.01 | 0.806853 | 6.723474e-50 | 3.688442e-47 |
| MsG0280010623.01 | MsG0880047697.01 | 0.804729 | 1.878438e-49 | 9.758933e-47 |
| MsG0280007511.01 | MsG0280010623.01 | -0.806953 | 6.404880e-50 | 3.522630e-47 |
| MsG0280007513.01 | MsG0280010623.01 | 0.806481 | 8.054601e-50 | 4.376680e-47 |
| MsG0280007670.01 | MsG0280010623.01 | 0.818923 | 1.521656e-52 | 1.154486e-49 |
| MsG0280007677.01 | MsG0280010623.01 | 0.839030 | 2.021295e-57 | 2.756610e-54 |
| MsG0280007689.01 | MsG0280010623.01 | 0.806167 | 9.382274e-50 | 5.057525e-47 |
| MsG0280007910.01 | MsG0280010623.01 | 0.800774 | 1.230749e-48 | 5.779598e-46 |
| MsG0280008178.01 | MsG0280010623.01 | 0.808786 | 2.610282e-50 | 1.506057e-47 |
| MsG0280008180.01 | MsG0280010623.01 | 0.823246 | 1.535872e-53 | 1.315236e-50 |
| MsG0280008226.01 | MsG0280010623.01 | 0.823604 | 1.266416e-53 | 1.095579e-50 |
| MsG0280008309.01 | MsG0280010623.01 | -0.833947 | 3.979788e-56 | 4.654262e-53 |
| MsG0280009253.01 | MsG0280010623.01 | 0.821240 | 4.484538e-53 | 3.628448e-50 |
| MsG0280009445.01 | MsG0280010623.01 | -0.831393 | 1.712847e-55 | 1.856262e-52 |
| MsG0280010515.01 | MsG0280010623.01 | 0.812568 | 3.970939e-51 | 2.533458e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010623.01.T01 | MTR_2g089000 | 62.771 | 231 | 34 | 4 | 1 | 180 | 3 | 232 | 5.12e-82 | 246 |
| MsG0280010623.01.T01 | MTR_4g081370 | 39.884 | 173 | 49 | 8 | 10 | 142 | 9 | 166 | 4.24e-19 | 83.2 |
| MsG0280010623.01.T01 | MTR_2g082640 | 38.636 | 176 | 40 | 9 | 10 | 142 | 9 | 159 | 7.52e-18 | 79.7 |
| MsG0280010623.01.T01 | MTR_4g081370 | 39.640 | 111 | 30 | 2 | 76 | 149 | 19 | 129 | 8.26e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010623.01.T01 | AT5G54680 | 43.269 | 104 | 22 | 2 | 76 | 142 | 58 | 161 | 7.91e-13 | 65.9 |
| MsG0280010623.01.T01 | AT1G51070 | 44.444 | 99 | 18 | 2 | 81 | 142 | 58 | 156 | 1.16e-12 | 65.5 |
| MsG0280010623.01.T01 | AT1G51070 | 41.593 | 113 | 28 | 3 | 68 | 142 | 110 | 222 | 1.70e-12 | 65.9 |
Find 57 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACATGATTTAAAGGTTTA+TGG | 0.113264 | 2:-72437914 | MsG0280010623.01.T01:intron |
| TATTTCTGCTGCTGATTTCA+TGG | 0.212247 | 2:-72438993 | MsG0280010623.01.T01:CDS |
| TCCATTTGGCTCTATGATTA+TGG | 0.214517 | 2:-72439031 | MsG0280010623.01.T01:CDS |
| TAGGCTAACCTTGTCAGTTT+TGG | 0.222266 | 2:+72437858 | None:intergenic |
| CCACAGGTGGTTCCTCCATT+TGG | 0.271652 | 2:-72439045 | MsG0280010623.01.T01:CDS |
| CACTTTCTCACGACCTGCCT+TGG | 0.343619 | 2:+72438029 | None:intergenic |
| TTATATTTGTAGCTTGGAAA+TGG | 0.345396 | 2:-72438618 | MsG0280010623.01.T01:intron |
| ATATATTTGCAGCATGGAAA+TGG | 0.370622 | 2:-72438247 | MsG0280010623.01.T01:intron |
| CTCACTTGATTCAACTGTAA+TGG | 0.376914 | 2:-72438591 | MsG0280010623.01.T01:CDS |
| CTGCTGCTCCTGCTTTCACC+TGG | 0.384655 | 2:-72438958 | MsG0280010623.01.T01:CDS |
| GGCTTGTAGATTTCCTTTCT+CGG | 0.387098 | 2:-72435851 | MsG0280010623.01.T01:intron |
| AAGATATATTACCGCTTTGA+AGG | 0.433191 | 2:+72438189 | None:intergenic |
| GAGATATATTACCGCTTTGA+AGG | 0.438022 | 2:+72438560 | None:intergenic |
| AATTCAGTGGAAGGAATCAT+TGG | 0.446693 | 2:-72435769 | MsG0280010623.01.T01:CDS |
| TTCACTGGATTCAACTGTAC+TGG | 0.450801 | 2:-72438220 | MsG0280010623.01.T01:CDS |
| CATGGAAATGGAATATTCAC+TGG | 0.465025 | 2:-72438235 | MsG0280010623.01.T01:CDS |
| ATTGGAGAGTCTGCTATTGA+AGG | 0.471110 | 2:-72435655 | MsG0280010623.01.T01:CDS |
| GATTCAACTGTACTGGAAAA+CGG | 0.474684 | 2:-72438213 | MsG0280010623.01.T01:CDS |
| ATTGAAGGTTCTGCTGCTAC+TGG | 0.475658 | 2:-72435640 | MsG0280010623.01.T01:CDS |
| GAGGGAATGATGGAAATCAT+TGG | 0.490266 | 2:-72435673 | MsG0280010623.01.T01:CDS |
| TCCTCTAGCACAACATTCAC+AGG | 0.493253 | 2:+72435807 | None:intergenic |
| TGAGGCATCCAGGTGAAAGC+AGG | 0.497970 | 2:+72438950 | None:intergenic |
| GAAGGGATAAATTGAATGAC+AGG | 0.502758 | 2:-72438005 | MsG0280010623.01.T01:intron |
| TCGGCTTCATCAACCGAGAA+AGG | 0.511101 | 2:+72435838 | None:intergenic |
| GGTGCTTCAGTAGATTCTGC+AGG | 0.511612 | 2:-72435703 | MsG0280010623.01.T01:CDS |
| TCTGTTTGTGCTTCAAACAA+AGG | 0.516346 | 2:-72435730 | MsG0280010623.01.T01:CDS |
| AGACTGAGGCTGAGGCATCC+AGG | 0.526908 | 2:+72438940 | None:intergenic |
| GCCATAATCATAGAGCCAAA+TGG | 0.530360 | 2:+72439030 | None:intergenic |
| TGTTGTGCTAGAGGAGAGGA+AGG | 0.532512 | 2:-72435799 | MsG0280010623.01.T01:CDS |
| TCTGCTGCTACTGGTGAGGC+AGG | 0.537334 | 2:-72435631 | MsG0280010623.01.T01:CDS |
| AGATATATTACCGCTTTGAA+GGG | 0.546831 | 2:+72438190 | None:intergenic |
| GGAATCATTGGAGAGAATGT+AGG | 0.550667 | 2:-72435757 | MsG0280010623.01.T01:CDS |
| GCTAGAGGAGAGGAAGGAGC+TGG | 0.552970 | 2:-72435793 | MsG0280010623.01.T01:CDS |
| TGTGCTTCAAACAAAGGACT+TGG | 0.558042 | 2:-72435724 | MsG0280010623.01.T01:CDS |
| AGATATATTACCGCTTTGAA+GGG | 0.561925 | 2:+72438561 | None:intergenic |
| CTGTTACTTTAGGTTAAGGA+CGG | 0.568187 | 2:-72438070 | MsG0280010623.01.T01:intron |
| TGAGTTTGAGACTGAGGCTG+AGG | 0.571581 | 2:+72438932 | None:intergenic |
| GGAAGGAGCTGGAAATTCAG+TGG | 0.575114 | 2:-72435782 | MsG0280010623.01.T01:CDS |
| AGATTCTGCAGGTGCTGCAG+AGG | 0.587849 | 2:-72435692 | MsG0280010623.01.T01:CDS |
| ACATTCACAGGATGATGTAT+CGG | 0.590193 | 2:+72435819 | None:intergenic |
| TATGCATCTAGCTCCAAGGC+AGG | 0.594326 | 2:-72438042 | MsG0280010623.01.T01:CDS |
| ATGGATATGGATTCCACAGG+TGG | 0.594619 | 2:-72439058 | None:intergenic |
| AGGTGCTGCAGAGGGAATGA+TGG | 0.596865 | 2:-72435683 | MsG0280010623.01.T01:CDS |
| CCAAATGGAGGAACCACCTG+TGG | 0.607270 | 2:+72439045 | None:intergenic |
| GGAGCTGGAAATTCAGTGGA+AGG | 0.607763 | 2:-72435778 | MsG0280010623.01.T01:CDS |
| GATTCTGCAGGTGCTGCAGA+GGG | 0.609354 | 2:-72435691 | MsG0280010623.01.T01:CDS |
| ATCATATGCATCTAGCTCCA+AGG | 0.614949 | 2:-72438046 | MsG0280010623.01.T01:CDS |
| TCCTGTGAATGTTGTGCTAG+AGG | 0.624901 | 2:-72435808 | MsG0280010623.01.T01:CDS |
| AGGTTCTGCTGCTACTGGTG+AGG | 0.629522 | 2:-72435635 | MsG0280010623.01.T01:CDS |
| ATTATGGATATGGATTCCAC+AGG | 0.629790 | 2:-72439061 | None:intergenic |
| AGGTCGTGAGAAAGTGCGAA+GGG | 0.647351 | 2:-72438022 | MsG0280010623.01.T01:CDS |
| CAGGTCGTGAGAAAGTGCGA+AGG | 0.654075 | 2:-72438023 | MsG0280010623.01.T01:CDS |
| TACGCTGCCCAAAACTGACA+AGG | 0.677310 | 2:-72437866 | MsG0280010623.01.T01:intron |
| ATAATCATAGAGCCAAATGG+AGG | 0.683773 | 2:+72439033 | None:intergenic |
| TGGAAAACGGCCCTTCAAAG+CGG | 0.713168 | 2:-72438200 | MsG0280010623.01.T01:intron |
| TGAATGTTGTGCTAGAGGAG+AGG | 0.716594 | 2:-72435803 | MsG0280010623.01.T01:CDS |
| TGGAAAGTAACCCTTCAAAG+CGG | 0.753113 | 2:-72438571 | MsG0280010623.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTATTTCTTAAATTTAT+AGG | - | Chr2:72437582-72437601 | MsG0280010623.01.T01:intron | 10.0% |
| !!! | AATTTTAAAAACAAACAATA+AGG | + | Chr2:72438333-72438352 | None:intergenic | 10.0% |
| !! | AAAATAAATAACTAGTTGAT+GGG | + | Chr2:72437267-72437286 | None:intergenic | 15.0% |
| !! | TAAAATAAATAACTAGTTGA+TGG | + | Chr2:72437268-72437287 | None:intergenic | 15.0% |
| !! | TAAGTTAAACAATAAATTTG+AGG | - | Chr2:72435940-72435959 | MsG0280010623.01.T01:intron | 15.0% |
| !! | TATATAAAAGATAGAAAAGA+CGG | + | Chr2:72437336-72437355 | None:intergenic | 15.0% |
| !! | AAGTAAACTTACTTATACAA+GGG | + | Chr2:72437083-72437102 | None:intergenic | 20.0% |
| !! | ACAAATAGACTCAATAAAAA+TGG | - | Chr2:72438721-72438740 | MsG0280010623.01.T01:intron | 20.0% |
| !! | AGAAAAAGTTAAAGAACTTA+AGG | - | Chr2:72436914-72436933 | MsG0280010623.01.T01:intron | 20.0% |
| !! | ATAGTAAACTAACTAATATG+AGG | + | Chr2:72437371-72437390 | None:intergenic | 20.0% |
| !! | ATTACTTTATATTTGTAGCT+TGG | - | Chr2:72436049-72436068 | MsG0280010623.01.T01:intron | 20.0% |
| !! | TAAAGTTATGTTTCCTTTAA+AGG | - | Chr2:72437673-72437692 | MsG0280010623.01.T01:intron | 20.0% |
| !! | TAGTAAACTAACTAATATGA+GGG | + | Chr2:72437370-72437389 | None:intergenic | 20.0% |
| !! | TTCAATTTGACATGATTTAA+AGG | - | Chr2:72436752-72436771 | MsG0280010623.01.T01:intron | 20.0% |
| !!! | ACTTCTATGAAAACATTTTA+GGG | + | Chr2:72438505-72438524 | None:intergenic | 20.0% |
| !!! | ATGTTATTTGAACAACAATT+TGG | + | Chr2:72438249-72438268 | None:intergenic | 20.0% |
| !!! | ATTTAAGAAATAACTTGTTC+CGG | + | Chr2:72437578-72437597 | None:intergenic | 20.0% |
| !!! | ATTTGTGTTGAAATTTGTTT+TGG | + | Chr2:72438707-72438726 | None:intergenic | 20.0% |
| !!! | TTTTTCGTATCTTATTATAG+TGG | - | Chr2:72436940-72436959 | MsG0280010623.01.T01:CDS | 20.0% |
| ! | AAAATCAATTGTAGAATCTG+CGG | - | Chr2:72435966-72435985 | MsG0280010623.01.T01:intron | 25.0% |
| ! | ACTAACAACTTTGTACAATA+AGG | + | Chr2:72437969-72437988 | None:intergenic | 25.0% |
| ! | AGTAAACTTACTTATACAAG+GGG | + | Chr2:72437082-72437101 | None:intergenic | 25.0% |
| ! | ATGAAATTGTTCAATACTAG+TGG | - | Chr2:72438554-72438573 | MsG0280010623.01.T01:intron | 25.0% |
| ! | ATTTGAACACTTGAAAATTG+TGG | + | Chr2:72438163-72438182 | None:intergenic | 25.0% |
| ! | CAAGTAAACTTACTTATACA+AGG | + | Chr2:72437084-72437103 | None:intergenic | 25.0% |
| ! | GTAATAATCATGAGAAAACT+TGG | + | Chr2:72436034-72436053 | None:intergenic | 25.0% |
| ! | TAAACTCAACACTATTGAAA+TGG | - | Chr2:72438798-72438817 | MsG0280010623.01.T01:intron | 25.0% |
| ! | TAAGATGATAACTAGTAGAT+AGG | + | Chr2:72437127-72437146 | None:intergenic | 25.0% |
| ! | TGACATGATTTAAAGGTTTA+TGG | - | Chr2:72436759-72436778 | MsG0280010623.01.T01:intron | 25.0% |
| ! | TTATAGCAGATAAAGTGAAA+AGG | + | Chr2:72438533-72438552 | None:intergenic | 25.0% |
| ! | TTATATTTGTAGCTTGGAAA+TGG | - | Chr2:72436055-72436074 | MsG0280010623.01.T01:intron | 25.0% |
| ! | TTGTAAAAGTTGTATACTGT+TGG | - | Chr2:72436515-72436534 | MsG0280010623.01.T01:intron | 25.0% |
| !! | ACAGTATACAACTTTTACAA+AGG | + | Chr2:72436515-72436534 | None:intergenic | 25.0% |
| !! | CTTCAAGTTAGAATCAATTA+TGG | - | Chr2:72436289-72436308 | MsG0280010623.01.T01:intron | 25.0% |
| !! | GACTTCTATGAAAACATTTT+AGG | + | Chr2:72438506-72438525 | None:intergenic | 25.0% |
| !!! | ATATATGCAACTGTTACTTT+AGG | - | Chr2:72436593-72436612 | MsG0280010623.01.T01:intron | 25.0% |
| AAATCAATTGTAGAATCTGC+GGG | - | Chr2:72435967-72435986 | MsG0280010623.01.T01:intron | 30.0% | |
| AAATTCGACAACTTCTTACA+TGG | - | Chr2:72438011-72438030 | MsG0280010623.01.T01:CDS | 30.0% | |
| AACTTTGTACAATAAGGAAG+TGG | + | Chr2:72437963-72437982 | None:intergenic | 30.0% | |
| AAGATATATTACCGCTTTGA+AGG | + | Chr2:72436487-72436506 | None:intergenic | 30.0% | |
| AATTAAGAAATGAAGCTGAG+AGG | - | Chr2:72436865-72436884 | MsG0280010623.01.T01:intron | 30.0% | |
| AATTCCAGGATAACAATGAA+AGG | + | Chr2:72437847-72437866 | None:intergenic | 30.0% | |
| AATTTCAAAGTCACCTCATA+TGG | + | Chr2:72435787-72435806 | None:intergenic | 30.0% | |
| ATATATTTGCAGCATGGAAA+TGG | - | Chr2:72436426-72436445 | MsG0280010623.01.T01:intron | 30.0% | |
| ATGTGAACAAGTATGAAACA+TGG | - | Chr2:72437647-72437666 | MsG0280010623.01.T01:intron | 30.0% | |
| CAAGTTAGAATCAATTATGG+TGG | - | Chr2:72436292-72436311 | MsG0280010623.01.T01:intron | 30.0% | |
| CTATCTATATATTTGCAGCA+TGG | - | Chr2:72436420-72436439 | MsG0280010623.01.T01:intron | 30.0% | |
| CTCAGCTTCATTTCTTAATT+GGG | + | Chr2:72436865-72436884 | None:intergenic | 30.0% | |
| GATGCTGCAATATAAATTTG+AGG | - | Chr2:72436231-72436250 | MsG0280010623.01.T01:intron | 30.0% | |
| TCTCAGCTTCATTTCTTAAT+TGG | + | Chr2:72436866-72436885 | None:intergenic | 30.0% | |
| TGAAGCTAGACAAAAAAAGT+TGG | - | Chr2:72437732-72437751 | MsG0280010623.01.T01:intron | 30.0% | |
| TGTTCAAATCTACATGTAGT+TGG | - | Chr2:72438174-72438193 | MsG0280010623.01.T01:intron | 30.0% | |
| ! | ACTAAAGTTTGCTTAGAAAC+TGG | - | Chr2:72438358-72438377 | MsG0280010623.01.T01:intron | 30.0% |
| ! | AGATATATTACCGCTTTGAA+GGG | + | Chr2:72436115-72436134 | None:intergenic | 30.0% |
| ! | TTTTTCTCATCCTTAGAAGA+AGG | - | Chr2:72438759-72438778 | MsG0280010623.01.T01:intron | 30.0% |
| !! | TAAAAATGGTTGAGTTGAGT+TGG | - | Chr2:72438735-72438754 | MsG0280010623.01.T01:intron | 30.0% |
| !! | TATTTTAGAAGCTCTGCATA+TGG | + | Chr2:72437486-72437505 | None:intergenic | 30.0% |
| !!! | TGATTTTGTGATGTTGATTC+TGG | - | Chr2:72435879-72435898 | MsG0280010623.01.T01:intron | 30.0% |
| AACTTTGCTTACTCCAAAAG+TGG | - | Chr2:72436343-72436362 | MsG0280010623.01.T01:intron | 35.0% | |
| AAGGACAAAGTGAATCACTT+AGG | + | Chr2:72438314-72438333 | None:intergenic | 35.0% | |
| AATTCAGTGGAAGGAATCAT+TGG | - | Chr2:72438904-72438923 | MsG0280010623.01.T01:intron | 35.0% | |
| ACATTCACAGGATGATGTAT+CGG | + | Chr2:72438857-72438876 | None:intergenic | 35.0% | |
| ACTCAACACTATTGAAATGG+AGG | - | Chr2:72438801-72438820 | MsG0280010623.01.T01:intron | 35.0% | |
| AGCAGATAAAGTGAAAAGGA+CGG | + | Chr2:72438529-72438548 | None:intergenic | 35.0% | |
| ATAATCATAGAGCCAAATGG+AGG | + | Chr2:72435643-72435662 | None:intergenic | 35.0% | |
| ATCAAACACGCGCAAATTTA+AGG | + | Chr2:72435837-72435856 | None:intergenic | 35.0% | |
| ATCTAACACTTCATGAACCA+CGG | + | Chr2:72438052-72438071 | None:intergenic | 35.0% | |
| CATGGAAATGGAATATTCAC+TGG | - | Chr2:72436438-72436457 | MsG0280010623.01.T01:intron | 35.0% | |
| CTCACTTGATTCAACTGTAA+TGG | - | Chr2:72436082-72436101 | MsG0280010623.01.T01:intron | 35.0% | |
| CTTACTTATACAAGGGGTTT+CGG | + | Chr2:72437076-72437095 | None:intergenic | 35.0% | |
| GAAGGGATAAATTGAATGAC+AGG | - | Chr2:72436668-72436687 | MsG0280010623.01.T01:intron | 35.0% | |
| GAGATATATTACCGCTTTGA+AGG | + | Chr2:72436116-72436135 | None:intergenic | 35.0% | |
| GATTCAACTGTACTGGAAAA+CGG | - | Chr2:72436460-72436479 | MsG0280010623.01.T01:intron | 35.0% | |
| GCACGTAGACTAAATTAAGA+GGG | + | Chr2:72437225-72437244 | None:intergenic | 35.0% | |
| GTGTTTATGACCTTCTTCTA+AGG | + | Chr2:72438772-72438791 | None:intergenic | 35.0% | |
| GTTATCCTGGAATTTCAATG+TGG | - | Chr2:72437853-72437872 | MsG0280010623.01.T01:intron | 35.0% | |
| TCAAACACGCGCAAATTTAA+GGG | + | Chr2:72435836-72435855 | None:intergenic | 35.0% | |
| TCTGTTTGTGCTTCAAACAA+AGG | - | Chr2:72438943-72438962 | MsG0280010623.01.T01:intron | 35.0% | |
| TCTTTCTTCTCAGCCTTTAA+AGG | + | Chr2:72437689-72437708 | None:intergenic | 35.0% | |
| TGCACGTAGACTAAATTAAG+AGG | + | Chr2:72437226-72437245 | None:intergenic | 35.0% | |
| TTACTTATACAAGGGGTTTC+GGG | + | Chr2:72437075-72437094 | None:intergenic | 35.0% | |
| ! | ATGATATGAGTTTGAGACTG+AGG | + | Chr2:72435750-72435769 | None:intergenic | 35.0% |
| ! | GGTTCATGAAGTGTTAGATT+TGG | - | Chr2:72438053-72438072 | MsG0280010623.01.T01:CDS | 35.0% |
| ! | TGTGTCCATCTTTGTTACTT+TGG | + | Chr2:72438684-72438703 | None:intergenic | 35.0% |
| !! | AAAATACTCTGGAGTGGATT+TGG | - | Chr2:72437500-72437519 | MsG0280010623.01.T01:intron | 35.0% |
| !! | AGGTTAGCCTATAAATGATG+CGG | - | Chr2:72436827-72436846 | MsG0280010623.01.T01:intron | 35.0% |
| !! | CTGTTACTTTAGGTTAAGGA+CGG | - | Chr2:72436603-72436622 | MsG0280010623.01.T01:intron | 35.0% |
| !! | GCAACTGTTACTTTAGGTTA+AGG | - | Chr2:72436599-72436618 | MsG0280010623.01.T01:intron | 35.0% |
| !! | TATTTCTGCTGCTGATTTCA+TGG | - | Chr2:72435680-72435699 | MsG0280010623.01.T01:CDS | 35.0% |
| !! | TCCATTTGGCTCTATGATTA+TGG | - | Chr2:72435642-72435661 | MsG0280010623.01.T01:CDS | 35.0% |
| AACTGCCACATTGAAATTCC+AGG | + | Chr2:72437861-72437880 | None:intergenic | 40.0% | |
| ACAAAAAAAGTTGGAGCAGC+AGG | - | Chr2:72437741-72437760 | MsG0280010623.01.T01:intron | 40.0% | |
| ACTCGAACCGCATCATTTAT+AGG | + | Chr2:72436837-72436856 | None:intergenic | 40.0% | |
| ATTGGAGAGTCTGCTATTGA+AGG | - | Chr2:72439018-72439037 | MsG0280010623.01.T01:CDS | 40.0% | |
| CCAATGTGAACCTTGAGATA+TGG | - | Chr2:72437404-72437423 | MsG0280010623.01.T01:intron | 40.0% | |
| CCATATCTCAAGGTTCACAT+TGG | + | Chr2:72437407-72437426 | None:intergenic | 40.0% | |
| GATGCCTTTCATTGTTATCC+TGG | - | Chr2:72437840-72437859 | MsG0280010623.01.T01:intron | 40.0% | |
| GCAGATAAAGTGAAAAGGAC+GGG | + | Chr2:72438528-72438547 | None:intergenic | 40.0% | |
| GCCATAATCATAGAGCCAAA+TGG | + | Chr2:72435646-72435665 | None:intergenic | 40.0% | |
| GGAATCATTGGAGAGAATGT+AGG | - | Chr2:72438916-72438935 | MsG0280010623.01.T01:intron | 40.0% | |
| GGCTTGTAGATTTCCTTTCT+CGG | - | Chr2:72438822-72438841 | MsG0280010623.01.T01:intron | 40.0% | |
| TAACCACTTTAAGCAACTGG+AGG | + | Chr2:72437930-72437949 | None:intergenic | 40.0% | |
| TAAGTTTACTTGCACCTGTG+CGG | - | Chr2:72437092-72437111 | MsG0280010623.01.T01:intron | 40.0% | |
| TACTTATACAAGGGGTTTCG+GGG | + | Chr2:72437074-72437093 | None:intergenic | 40.0% | |
| TAGATAAAGATGTCGCCATG+TGG | + | Chr2:72437029-72437048 | None:intergenic | 40.0% | |
| TATAAATGATGCGGTTCGAG+TGG | - | Chr2:72436836-72436855 | MsG0280010623.01.T01:intron | 40.0% | |
| TCGCACCAAAGTAACAAAGA+TGG | - | Chr2:72438676-72438695 | MsG0280010623.01.T01:intron | 40.0% | |
| TCTAACACTTCATGAACCAC+GGG | + | Chr2:72438051-72438070 | None:intergenic | 40.0% | |
| TGCTAACCACTTTAAGCAAC+TGG | + | Chr2:72437933-72437952 | None:intergenic | 40.0% | |
| TGGAAAGTAACCCTTCAAAG+CGG | - | Chr2:72436102-72436121 | MsG0280010623.01.T01:intron | 40.0% | |
| TGTGCTTCAAACAAAGGACT+TGG | - | Chr2:72438949-72438968 | MsG0280010623.01.T01:CDS | 40.0% | |
| TTCAAAGTCACCTCATATGG+AGG | + | Chr2:72435784-72435803 | None:intergenic | 40.0% | |
| TTCACTGGATTCAACTGTAC+TGG | - | Chr2:72436453-72436472 | MsG0280010623.01.T01:intron | 40.0% | |
| ! | AATCACAGAGAGTGTGTGTT+TGG | + | Chr2:72436371-72436390 | None:intergenic | 40.0% |
| ! | ACAAAGGTCTAGTTCAGAGA+TGG | - | Chr2:72437532-72437551 | MsG0280010623.01.T01:intron | 40.0% |
| ! | AGGCTAACCTTGTCAGTTTT+GGG | + | Chr2:72436817-72436836 | None:intergenic | 40.0% |
| ! | ATCATATGCATCTAGCTCCA+AGG | - | Chr2:72436627-72436646 | MsG0280010623.01.T01:intron | 40.0% |
| ! | GAGGGAATGATGGAAATCAT+TGG | - | Chr2:72439000-72439019 | MsG0280010623.01.T01:CDS | 40.0% |
| ! | TAGGCTAACCTTGTCAGTTT+TGG | + | Chr2:72436818-72436837 | None:intergenic | 40.0% |
| !! | ATAGAAAAGACGGTGTCATG+TGG | + | Chr2:72437326-72437345 | None:intergenic | 40.0% |
| !! | GAAATAACTTGTTCCGGACT+TGG | + | Chr2:72437572-72437591 | None:intergenic | 40.0% |
| !! | GCAGAGCTTCTAAAATACTC+TGG | - | Chr2:72437489-72437508 | MsG0280010623.01.T01:intron | 40.0% |
| !! | GCTTCTAAAATACTCTGGAG+TGG | - | Chr2:72437494-72437513 | MsG0280010623.01.T01:intron | 40.0% |
| !! | TGTGTGTTTGGTTCCACTTT+TGG | + | Chr2:72436359-72436378 | None:intergenic | 40.0% |
| AAATGAAGCTGAGAGGCTCA+AGG | - | Chr2:72436872-72436891 | MsG0280010623.01.T01:intron | 45.0% | |
| AAGTCACCTCATATGGAGGA+AGG | + | Chr2:72435780-72435799 | None:intergenic | 45.0% | |
| AGCATCTATATTGTGCCACG+TGG | - | Chr2:72437162-72437181 | MsG0280010623.01.T01:intron | 45.0% | |
| ATCAGCTTGTGGTTACCAGT+TGG | + | Chr2:72437823-72437842 | None:intergenic | 45.0% | |
| ATTGAAGGTTCTGCTGCTAC+TGG | - | Chr2:72439033-72439052 | MsG0280010623.01.T01:CDS | 45.0% | |
| GATTTGGACTTGTGGCACAA+AGG | - | Chr2:72437516-72437535 | MsG0280010623.01.T01:intron | 45.0% | |
| GCACAACGTGGATAACTGAA+CGG | + | Chr2:72437304-72437323 | None:intergenic | 45.0% | |
| TCCTCTAGCACAACATTCAC+AGG | + | Chr2:72438869-72438888 | None:intergenic | 45.0% | |
| TCCTGTGAATGTTGTGCTAG+AGG | - | Chr2:72438865-72438884 | MsG0280010623.01.T01:intron | 45.0% | |
| TGAATGTTGTGCTAGAGGAG+AGG | - | Chr2:72438870-72438889 | MsG0280010623.01.T01:intron | 45.0% | |
| TGTGATGTATCAACTGCAGC+AGG | + | Chr2:72437891-72437910 | None:intergenic | 45.0% | |
| TGTGGCTCAACCATATCTCA+AGG | + | Chr2:72437417-72437436 | None:intergenic | 45.0% | |
| ! | TGCTGCAGTTGATACATCAC+AGG | - | Chr2:72437890-72437909 | MsG0280010623.01.T01:CDS | 45.0% |
| !! | CAATGAAAGGCATCAGCTTG+TGG | + | Chr2:72437834-72437853 | None:intergenic | 45.0% |
| AACCCTCCTTCCTCCATATG+AGG | - | Chr2:72435771-72435790 | MsG0280010623.01.T01:CDS | 50.0% | |
| AAGCTGAGAGGCTCAAGGAA+AGG | - | Chr2:72436877-72436896 | MsG0280010623.01.T01:intron | 50.0% | |
| AGTTGGTCCTTTAGCAGCCA+TGG | + | Chr2:72437806-72437825 | None:intergenic | 50.0% | |
| ATGGCTGCTAAAGGACCAAC+TGG | - | Chr2:72437805-72437824 | MsG0280010623.01.T01:intron | 50.0% | |
| CACCTCATATGGAGGAAGGA+GGG | + | Chr2:72435776-72435795 | None:intergenic | 50.0% | |
| CGACCTCCAGTTGCTTAAAG+TGG | - | Chr2:72437924-72437943 | MsG0280010623.01.T01:intron | 50.0% | |
| CTAGTTCAGAGATGGACCGT+GGG | - | Chr2:72437540-72437559 | MsG0280010623.01.T01:intron | 50.0% | |
| GGAAGGAGCTGGAAATTCAG+TGG | - | Chr2:72438891-72438910 | MsG0280010623.01.T01:intron | 50.0% | |
| GGAGCTGGAAATTCAGTGGA+AGG | - | Chr2:72438895-72438914 | MsG0280010623.01.T01:intron | 50.0% | |
| GGTGCTTCAGTAGATTCTGC+AGG | - | Chr2:72438970-72438989 | MsG0280010623.01.T01:CDS | 50.0% | |
| GTTCTCCATGTTGTGCCACA+TGG | - | Chr2:72437011-72437030 | MsG0280010623.01.T01:intron | 50.0% | |
| TACGCTGCCCAAAACTGACA+AGG | - | Chr2:72436807-72436826 | MsG0280010623.01.T01:intron | 50.0% | |
| TAGCTTCCTCTCCAATGCCA+TGG | - | Chr2:72437786-72437805 | MsG0280010623.01.T01:intron | 50.0% | |
| TCACCTCATATGGAGGAAGG+AGG | + | Chr2:72435777-72435796 | None:intergenic | 50.0% | |
| TCCAATGCCATGGCTGCTAA+AGG | - | Chr2:72437796-72437815 | MsG0280010623.01.T01:intron | 50.0% | |
| TCCTTTAGCAGCCATGGCAT+TGG | + | Chr2:72437800-72437819 | None:intergenic | 50.0% | |
| TCGATAAAGACGTTGCCACG+TGG | + | Chr2:72437180-72437199 | None:intergenic | 50.0% | |
| TCGGCTTCATCAACCGAGAA+AGG | + | Chr2:72438838-72438857 | None:intergenic | 50.0% | |
| TGGAAAACGGCCCTTCAAAG+CGG | - | Chr2:72436473-72436492 | MsG0280010623.01.T01:intron | 50.0% | |
| TGTTGTGCTAGAGGAGAGGA+AGG | - | Chr2:72438874-72438893 | MsG0280010623.01.T01:intron | 50.0% | |
| ! | ACGTGCACATGTGCTGATCA+CGG | - | Chr2:72437239-72437258 | MsG0280010623.01.T01:intron | 50.0% |
| ! | AGGTCGTGAGAAAGTGCGAA+GGG | - | Chr2:72436651-72436670 | MsG0280010623.01.T01:intron | 50.0% |
| ! | CTGGAGTGGATTTGGACTTG+TGG | - | Chr2:72437508-72437527 | MsG0280010623.01.T01:intron | 50.0% |
| ! | TATGCATCTAGCTCCAAGGC+AGG | - | Chr2:72436631-72436650 | MsG0280010623.01.T01:intron | 50.0% |
| ! | TCTAGTTCAGAGATGGACCG+TGG | - | Chr2:72437539-72437558 | MsG0280010623.01.T01:intron | 50.0% |
| ! | TGAGTTTGAGACTGAGGCTG+AGG | + | Chr2:72435744-72435763 | None:intergenic | 50.0% |
| !!! | TCAGTTTTGGGCAGCGTATC+AGG | + | Chr2:72436805-72436824 | None:intergenic | 50.0% |
| AAACGATGATCTGCACGCCG+TGG | + | Chr2:72437449-72437468 | None:intergenic | 55.0% | |
| AAGCAACTGGAGGTCGAAGC+AGG | + | Chr2:72437920-72437939 | None:intergenic | 55.0% | |
| ACGGCGTGCAGATCATCGTT+TGG | - | Chr2:72437448-72437467 | MsG0280010623.01.T01:intron | 55.0% | |
| ACTTGTTCCGGACTTGGCCA+CGG | + | Chr2:72437566-72437585 | None:intergenic | 55.0% | |
| AGGTTCTGCTGCTACTGGTG+AGG | - | Chr2:72439038-72439057 | MsG0280010623.01.T01:CDS | 55.0% | |
| ATAGGACCTATGTGCCGCAC+AGG | + | Chr2:72437109-72437128 | None:intergenic | 55.0% | |
| CACTTTCTCACGACCTGCCT+TGG | + | Chr2:72436647-72436666 | None:intergenic | 55.0% | |
| CCAAATGGAGGAACCACCTG+TGG | + | Chr2:72435631-72435650 | None:intergenic | 55.0% | |
| CCACAGGTGGTTCCTCCATT+TGG | - | Chr2:72435628-72435647 | MsG0280010623.01.T01:CDS | 55.0% | |
| GAGCCACATAGACCTTGCCA+CGG | - | Chr2:72437429-72437448 | MsG0280010623.01.T01:intron | 55.0% | |
| TGTCGCCATGTGGCACAACA+TGG | + | Chr2:72437019-72437038 | None:intergenic | 55.0% | |
| ! | AGATTCTGCAGGTGCTGCAG+AGG | - | Chr2:72438981-72439000 | MsG0280010623.01.T01:CDS | 55.0% |
| ! | AGGTGCTGCAGAGGGAATGA+TGG | - | Chr2:72438990-72439009 | MsG0280010623.01.T01:CDS | 55.0% |
| ! | CAGGTCGTGAGAAAGTGCGA+AGG | - | Chr2:72436650-72436669 | MsG0280010623.01.T01:intron | 55.0% |
| ! | CGTGCACATGTGCTGATCAC+GGG | - | Chr2:72437240-72437259 | MsG0280010623.01.T01:intron | 55.0% |
| ! | GATTCTGCAGGTGCTGCAGA+GGG | - | Chr2:72438982-72439001 | MsG0280010623.01.T01:CDS | 55.0% |
| ! | TAGCAGCCATGGCATTGGAG+AGG | + | Chr2:72437795-72437814 | None:intergenic | 55.0% |
| ! | TGAGGCATCCAGGTGAAAGC+AGG | + | Chr2:72435726-72435745 | None:intergenic | 55.0% |
| ACGCCGTGGCAAGGTCTATG+TGG | + | Chr2:72437435-72437454 | None:intergenic | 60.0% | |
| ATGATCTGCACGCCGTGGCA+AGG | + | Chr2:72437444-72437463 | None:intergenic | 60.0% | |
| CATGAACCACGGGTGCGAAC+TGG | + | Chr2:72438041-72438060 | None:intergenic | 60.0% | |
| CTGCTGCTCCTGCTTTCACC+TGG | - | Chr2:72435715-72435734 | MsG0280010623.01.T01:CDS | 60.0% | |
| CTTGCACCTGTGCGGCACAT+AGG | - | Chr2:72437100-72437119 | MsG0280010623.01.T01:intron | 60.0% | |
| GCTAGAGGAGAGGAAGGAGC+TGG | - | Chr2:72438880-72438899 | MsG0280010623.01.T01:intron | 60.0% | |
| GGTTAACCAGTTCGCACCCG+TGG | - | Chr2:72438032-72438051 | MsG0280010623.01.T01:CDS | 60.0% | |
| TCTGCTGCTACTGGTGAGGC+AGG | - | Chr2:72439042-72439061 | MsG0280010623.01.T01:CDS | 60.0% | |
| ! | AGACTGAGGCTGAGGCATCC+AGG | + | Chr2:72435736-72435755 | None:intergenic | 60.0% |
| !! | CGGTGTCATGTGGCACAACG+TGG | + | Chr2:72437316-72437335 | None:intergenic | 60.0% |
| CAGAGATGGACCGTGGGCCG+TGG | - | Chr2:72437546-72437565 | MsG0280010623.01.T01:intron | 70.0% | |
| CCGGACTTGGCCACGGCCCA+CGG | + | Chr2:72437559-72437578 | None:intergenic | 75.0% | |
| CCGTGGGCCGTGGCCAAGTC+CGG | - | Chr2:72437556-72437575 | MsG0280010623.01.T01:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 72435621 | 72439074 | 72435621 | ID=MsG0280010623.01;Name=MsG0280010623.01 |
| Chr2 | mRNA | 72435621 | 72439074 | 72435621 | ID=MsG0280010623.01.T01;Parent=MsG0280010623.01;Name=MsG0280010623.01.T01;_AED=0.60;_eAED=0.60;_QI=0|0.5|0.42|0.85|1|1|7|0|228 |
| Chr2 | exon | 72438944 | 72439074 | 72438944 | ID=MsG0280010623.01.T01:exon:7052;Parent=MsG0280010623.01.T01 |
| Chr2 | exon | 72438572 | 72438628 | 72438572 | ID=MsG0280010623.01.T01:exon:7051;Parent=MsG0280010623.01.T01 |
| Chr2 | exon | 72438201 | 72438257 | 72438201 | ID=MsG0280010623.01.T01:exon:7050;Parent=MsG0280010623.01.T01 |
| Chr2 | exon | 72438006 | 72438080 | 72438006 | ID=MsG0280010623.01.T01:exon:7049;Parent=MsG0280010623.01.T01 |
| Chr2 | exon | 72437867 | 72437921 | 72437867 | ID=MsG0280010623.01.T01:exon:7048;Parent=MsG0280010623.01.T01 |
| Chr2 | exon | 72436933 | 72437000 | 72436933 | ID=MsG0280010623.01.T01:exon:7047;Parent=MsG0280010623.01.T01 |
| Chr2 | exon | 72435621 | 72435864 | 72435621 | ID=MsG0280010623.01.T01:exon:7046;Parent=MsG0280010623.01.T01 |
| Chr2 | CDS | 72438944 | 72439074 | 72438944 | ID=MsG0280010623.01.T01:cds;Parent=MsG0280010623.01.T01 |
| Chr2 | CDS | 72438572 | 72438628 | 72438572 | ID=MsG0280010623.01.T01:cds;Parent=MsG0280010623.01.T01 |
| Chr2 | CDS | 72438201 | 72438257 | 72438201 | ID=MsG0280010623.01.T01:cds;Parent=MsG0280010623.01.T01 |
| Chr2 | CDS | 72438006 | 72438080 | 72438006 | ID=MsG0280010623.01.T01:cds;Parent=MsG0280010623.01.T01 |
| Chr2 | CDS | 72437867 | 72437921 | 72437867 | ID=MsG0280010623.01.T01:cds;Parent=MsG0280010623.01.T01 |
| Chr2 | CDS | 72436933 | 72437000 | 72436933 | ID=MsG0280010623.01.T01:cds;Parent=MsG0280010623.01.T01 |
| Chr2 | CDS | 72435621 | 72435864 | 72435621 | ID=MsG0280010623.01.T01:cds;Parent=MsG0280010623.01.T01 |
| Gene Sequence |
| Protein sequence |
