AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680032055.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032055.01.T02 MTR_6g035305 88.624 378 4 1 1 378 1 339 0.0 678
MsG0680032055.01.T02 MTR_2g008030 75.936 374 51 1 1 374 1 335 0.0 580
MsG0680032055.01.T02 MTR_7g066120 45.144 381 152 3 11 374 71 411 1.68e-106 319
MsG0680032055.01.T02 MTR_0776s0010 37.158 366 187 5 7 367 284 611 3.46e-77 259
MsG0680032055.01.T02 MTR_4g093620 37.429 350 157 8 32 371 87 384 1.89e-66 216
MsG0680032055.01.T02 MTR_3g070100 28.636 220 129 8 155 366 165 364 3.32e-15 76.6
MsG0680032055.01.T01 MTR_6g035305 88.624 378 4 1 1 378 1 339 0.0 678
MsG0680032055.01.T01 MTR_2g008030 75.936 374 51 1 1 374 1 335 0.0 580
MsG0680032055.01.T01 MTR_7g066120 45.144 381 152 3 11 374 71 411 1.68e-106 319
MsG0680032055.01.T01 MTR_0776s0010 37.158 366 187 5 7 367 284 611 3.46e-77 259
MsG0680032055.01.T01 MTR_4g093620 37.429 350 157 8 32 371 87 384 1.89e-66 216
MsG0680032055.01.T01 MTR_3g070100 28.636 220 129 8 155 366 165 364 3.32e-15 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032055.01.T02 AT1G43670 76.984 378 48 1 1 378 1 339 0.0 597
MsG0680032055.01.T02 AT3G54050 45.144 381 150 4 11 374 79 417 5.77e-106 318
MsG0680032055.01.T02 AT3G54050 45.144 381 150 4 11 374 79 417 5.77e-106 318
MsG0680032055.01.T02 AT5G64380 37.429 350 161 9 32 371 89 390 3.25e-67 218
MsG0680032055.01.T02 AT3G55800 29.911 224 121 8 155 366 172 371 3.40e-16 79.7
MsG0680032055.01.T01 AT1G43670 76.984 378 48 1 1 378 1 339 0.0 597
MsG0680032055.01.T01 AT3G54050 45.144 381 150 4 11 374 79 417 5.77e-106 318
MsG0680032055.01.T01 AT3G54050 45.144 381 150 4 11 374 79 417 5.77e-106 318
MsG0680032055.01.T01 AT5G64380 37.429 350 161 9 32 371 89 390 3.25e-67 218
MsG0680032055.01.T01 AT3G55800 29.911 224 121 8 155 366 172 371 3.40e-16 79.7

Find 10 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATATATCTAAAGAATTT+TGG 0.207023 6:+32803109 MsG0680032055.01.T01:five_prime_UTR
TTGCTTAATAACATTGTTCT+TGG 0.232374 6:+32803314 MsG0680032055.01.T01:CDS
GTGAAATCTCCACGTGATTC+AGG 0.296233 6:-32803287 None:intergenic
CGATTGATTCATTCATTCAT+TGG 0.344065 6:+32803160 MsG0680032055.01.T01:five_prime_UTR
ATTCAACACAAAACGTGTTA+TGG 0.348871 6:-32803249 None:intergenic
TTGGTACGTACGTAGTTGAT+TGG 0.429492 6:+32803128 MsG0680032055.01.T01:five_prime_UTR
AACAATGTTATTAAGCAAGA+TGG 0.499875 6:-32803309 None:intergenic
TGTTTGTTCTGCTGTTAACA+AGG 0.601443 6:+32803346 MsG0680032055.01.T01:CDS
TACGATGTGCATCTGCGCTG+TGG 0.637166 6:-32803214 None:intergenic
TCTAAGCATCCTGAATCACG+TGG 0.704682 6:+32803278 MsG0680032055.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATACATATATATGATA+AGG - Chr6:32810358-32810377 None:intergenic 10.0%
!!! ACATTTTTTTTATTTGTTAA+GGG - Chr6:32809747-32809766 None:intergenic 10.0%
!!! ATAAACAACTTAATTTTATT+TGG + Chr6:32804121-32804140 MsG0680032055.01.T01:intron 10.0%
!!! TCTAATTATTTTAATTTTGA+TGG + Chr6:32809044-32809063 MsG0680032055.01.T01:intron 10.0%
!!! TTAAAAAGTGATTTTTATTA+TGG - Chr6:32809246-32809265 None:intergenic 10.0%
!! AAATAGAATGAAATAATCAT+TGG - Chr6:32809578-32809597 None:intergenic 15.0%
!! AATAAGTTTGCATTATAAAT+AGG - Chr6:32807165-32807184 None:intergenic 15.0%
!! ATAATAAGAATATAGATACA+TGG + Chr6:32809817-32809836 MsG0680032055.01.T01:intron 15.0%
!! CTAAAGTCTATAATTATTAA+TGG + Chr6:32808177-32808196 MsG0680032055.01.T01:intron 15.0%
!! GAAAAAAATTAAACTTGTAT+TGG - Chr6:32809453-32809472 None:intergenic 15.0%
!! TTCATATTAAATATTTCACA+CGG - Chr6:32808119-32808138 None:intergenic 15.0%
!!! AAAATAACTTAATTTTTGGT+CGG + Chr6:32804852-32804871 MsG0680032055.01.T01:intron 15.0%
!!! AAACAAGTTTTAATTCTTAT+AGG - Chr6:32810334-32810353 None:intergenic 15.0%
!!! AAGCTAATATAATTTGTATT+TGG + Chr6:32809021-32809040 MsG0680032055.01.T01:intron 15.0%
!!! AATCACTTTTTAAAACAAAT+CGG + Chr6:32809253-32809272 MsG0680032055.01.T01:intron 15.0%
!!! ACTCAAAATAACTTAATTTT+TGG + Chr6:32804848-32804867 MsG0680032055.01.T01:intron 15.0%
!!! ATATACTTATAAGTTTGTTT+GGG - Chr6:32804795-32804814 None:intergenic 15.0%
!!! CACATTTTTTTTATTTGTTA+AGG - Chr6:32809748-32809767 None:intergenic 15.0%
!!! CATATATATCTAAAGAATTT+TGG + Chr6:32803109-32803128 MsG0680032055.01.T01:five_prime_UTR 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - Chr6:32809413-32809432 None:intergenic 15.0%
!!! TTAAATTATTATTTTTCTGC+AGG + Chr6:32809335-32809354 MsG0680032055.01.T01:intron 15.0%
!!! TTTTCAGACAAAATTAAAAA+GGG + Chr6:32807837-32807856 MsG0680032055.01.T01:intron 15.0%
!!! TTTTTCAGACAAAATTAAAA+AGG + Chr6:32807836-32807855 MsG0680032055.01.T01:intron 15.0%
!! ACCAATATTTAAAAATCACT+TGG + Chr6:32806760-32806779 MsG0680032055.01.T01:intron 20.0%
!! ATATGTGCTTCATTAAATAT+CGG + Chr6:32803660-32803679 MsG0680032055.01.T01:intron 20.0%
!! CAACCAAAAGATAAAAAATA+AGG - Chr6:32807094-32807113 None:intergenic 20.0%
!! CAATAGATCTTAAATTGTAA+TGG - Chr6:32806435-32806454 None:intergenic 20.0%
!! GATAAATCTTCTATGATATT+AGG + Chr6:32810129-32810148 MsG0680032055.01.T01:intron 20.0%
!! GATGATTGAAAATATAACAA+TGG + Chr6:32807374-32807393 MsG0680032055.01.T01:intron 20.0%
!! TAGAAGATTTATCAGTTTAT+TGG - Chr6:32810122-32810141 None:intergenic 20.0%
!! TATTTAACAACTGAGTTTAA+TGG + Chr6:32805406-32805425 MsG0680032055.01.T01:intron 20.0%
!! TATTTAATGAAGCACATATA+CGG - Chr6:32803659-32803678 None:intergenic 20.0%
!! TGATATTGCATGATTAAAAA+AGG + Chr6:32803730-32803749 MsG0680032055.01.T01:intron 20.0%
!!! AAAATACTACTTTTTCATCA+TGG + Chr6:32805031-32805050 MsG0680032055.01.T01:intron 20.0%
!!! AAAGATTAATTTTGTACACT+TGG + Chr6:32808533-32808552 MsG0680032055.01.T01:intron 20.0%
!!! AACAAATTCTCATTTTAAGT+AGG + Chr6:32809310-32809329 MsG0680032055.01.T01:intron 20.0%
!!! AGTTCTTTAAAAATCACTTT+CGG - Chr6:32804889-32804908 None:intergenic 20.0%
!!! ATCAAATTTGATTTAGAACT+TGG + Chr6:32804986-32805005 MsG0680032055.01.T01:intron 20.0%
!!! ATGATTAAAAAAGGTTGATA+TGG + Chr6:32803739-32803758 MsG0680032055.01.T01:intron 20.0%
!!! ATTAAGTTGTTTATCCAAAT+AGG - Chr6:32804115-32804134 None:intergenic 20.0%
!!! ATTTTACTACTTTATCTACA+TGG + Chr6:32810071-32810090 MsG0680032055.01.T01:intron 20.0%
!!! CATATACTTATAAGTTTGTT+TGG - Chr6:32804796-32804815 None:intergenic 20.0%
!!! GTCTTTTTCTAATAAAGTAA+GGG + Chr6:32809530-32809549 MsG0680032055.01.T01:intron 20.0%
!!! GTTATCAAGATTTATTTTTG+TGG + Chr6:32803689-32803708 MsG0680032055.01.T01:intron 20.0%
!!! TATTTGTTTTCATTTTCCAT+AGG + Chr6:32803391-32803410 MsG0680032055.01.T01:intron 20.0%
!!! TCCAAGTGATTTTTAAATAT+TGG - Chr6:32806764-32806783 None:intergenic 20.0%
!!! TCTATTTTTTATTACGATTC+AGG + Chr6:32805818-32805837 MsG0680032055.01.T01:CDS 20.0%
!!! TCTTTATTGTTTTGAATGAA+GGG + Chr6:32805289-32805308 MsG0680032055.01.T01:intron 20.0%
!!! TGATAGAAAATTGATGATTT+TGG - Chr6:32808241-32808260 None:intergenic 20.0%
!!! TGTCTTTTTCTAATAAAGTA+AGG + Chr6:32809529-32809548 MsG0680032055.01.T01:intron 20.0%
!!! TGTGATTTTCTGTAATTATT+AGG + Chr6:32803590-32803609 MsG0680032055.01.T01:intron 20.0%
!!! TGTTTTTGTATAACCTATTT+TGG + Chr6:32804349-32804368 MsG0680032055.01.T01:intron 20.0%
!!! TTAAGTTGTTTATCCAAATA+GGG - Chr6:32804114-32804133 None:intergenic 20.0%
!!! TTATATTAGCTTAAACATTG+AGG - Chr6:32809013-32809032 None:intergenic 20.0%
!!! TTATTTTCATAAACTCTTCT+AGG - Chr6:32807684-32807703 None:intergenic 20.0%
!!! TTCTTTATTGTTTTGAATGA+AGG + Chr6:32805288-32805307 MsG0680032055.01.T01:intron 20.0%
!!! TTGCCTTATTTTTTATCTTT+TGG + Chr6:32807088-32807107 MsG0680032055.01.T01:intron 20.0%
!!! TTTATTACACAACTTGTTAT+TGG + Chr6:32808456-32808475 MsG0680032055.01.T01:intron 20.0%
!!! TTTTAAATATTGGTTTACCA+TGG - Chr6:32806754-32806773 None:intergenic 20.0%
!!! TTTTTCTTATTACAGTTATG+TGG + Chr6:32807406-32807425 MsG0680032055.01.T01:intron 20.0%
! AAAGAAAGGCAAGATTTATT+CGG + Chr6:32807268-32807287 MsG0680032055.01.T01:CDS 25.0%
! AACAATGTTATTAAGCAAGA+TGG - Chr6:32803312-32803331 None:intergenic 25.0%
! AATAAATCTTGCCTTTCTTT+GGG - Chr6:32807268-32807287 None:intergenic 25.0%
! ACAATTGTCTTAAAAGCAAA+TGG - Chr6:32807915-32807934 None:intergenic 25.0%
! AGATTAAAGAAGCTGAAAAA+TGG - Chr6:32808291-32808310 None:intergenic 25.0%
! ATATATACACTCTTCACTAA+AGG - Chr6:32808358-32808377 None:intergenic 25.0%
! CAATCAAGACTTCAATATAT+TGG - Chr6:32804591-32804610 None:intergenic 25.0%
! CCATAATTGTATATCAATCA+CGG - Chr6:32803924-32803943 None:intergenic 25.0%
! CTTATGTTTGAAAACTAATG+AGG - Chr6:32808382-32808401 None:intergenic 25.0%
! CTTGTGGATAAAAAAAAATG+TGG - Chr6:32808668-32808687 None:intergenic 25.0%
! GATTGATATTTCATACTAAC+CGG + Chr6:32806180-32806199 MsG0680032055.01.T01:intron 25.0%
! GGATAAAAAAAAATGTGGTT+GGG - Chr6:32808663-32808682 None:intergenic 25.0%
! GTCTAATAATGATCCTTTAT+TGG + Chr6:32810003-32810022 MsG0680032055.01.T01:intron 25.0%
! GTGAGATTTCAATAAAAGTA+TGG + Chr6:32809839-32809858 MsG0680032055.01.T01:intron 25.0%
! TATATACACTCTTCACTAAA+GGG - Chr6:32808357-32808376 None:intergenic 25.0%
! TCTGTAATTATTAGGAGTTT+CGG + Chr6:32803598-32803617 MsG0680032055.01.T01:intron 25.0%
! TGGATAAAAAAAAATGTGGT+TGG - Chr6:32808664-32808683 None:intergenic 25.0%
! TTGCTTAATAACATTGTTCT+TGG + Chr6:32803314-32803333 MsG0680032055.01.T01:CDS 25.0%
! TTTCATAAGTTCTCCAAAAT+AGG - Chr6:32804365-32804384 None:intergenic 25.0%
!! TCATATGAGTTTTCATGTTT+TGG + Chr6:32808258-32808277 MsG0680032055.01.T01:intron 25.0%
!! TCTTTTTACGGAAATAAACT+TGG + Chr6:32809782-32809801 MsG0680032055.01.T01:intron 25.0%
!! TGAACATTTTGCAGATTTTT+GGG + Chr6:32806220-32806239 MsG0680032055.01.T01:intron 25.0%
!! TTCACATATATTCTCTAAGA+AGG + Chr6:32805558-32805577 MsG0680032055.01.T01:intron 25.0%
!! TTGAACATTTTGCAGATTTT+TGG + Chr6:32806219-32806238 MsG0680032055.01.T01:intron 25.0%
!! TTTTTGTACATTAAACAGCA+TGG + Chr6:32808890-32808909 MsG0680032055.01.T01:intron 25.0%
!!! AAATCACTTTTGATTGATGA+TGG + Chr6:32805079-32805098 MsG0680032055.01.T01:intron 25.0%
!!! ATCTGACTAAAGATTTTTAG+TGG + Chr6:32808627-32808646 MsG0680032055.01.T01:intron 25.0%
!!! GAAGTTTAACTGTGATTTTT+TGG + Chr6:32805774-32805793 MsG0680032055.01.T01:intron 25.0%
!!! TCTGACTAAAGATTTTTAGT+GGG + Chr6:32808628-32808647 MsG0680032055.01.T01:intron 25.0%
!!! TGAGATTTTGTTATATGTGT+AGG + Chr6:32804713-32804732 MsG0680032055.01.T01:intron 25.0%
!!! TGCAACTAAGATTTTAATTG+TGG + Chr6:32804543-32804562 MsG0680032055.01.T01:intron 25.0%
!!! TTATTACTACAACTTGTTGT+TGG + Chr6:32808558-32808577 MsG0680032055.01.T01:intron 25.0%
AAAAAAAATGTGGTTGGGAT+AGG - Chr6:32808658-32808677 None:intergenic 30.0%
AAACCAAGTGTACAAAATAG+AGG - Chr6:32808438-32808457 None:intergenic 30.0%
AAACTCTTCTAGGTAGTTTA+TGG - Chr6:32807674-32807693 None:intergenic 30.0%
AAATAAGGCAAATTCTACAG+TGG - Chr6:32807079-32807098 None:intergenic 30.0%
AAGTTGTTTATCCAAGTGAT+TGG - Chr6:32804259-32804278 None:intergenic 30.0%
AATAGTGATCCATAAGTTAG+CGG - Chr6:32806561-32806580 None:intergenic 30.0%
AATCAAAACCTTGATTACAC+CGG - Chr6:32805635-32805654 None:intergenic 30.0%
AATTCCAAACACACACTTAA+AGG - Chr6:32804038-32804057 None:intergenic 30.0%
ACAAATACGAAAAAGAGTGA+AGG - Chr6:32803378-32803397 None:intergenic 30.0%
ACAAATTTGAGTAGGGATTA+GGG - Chr6:32805917-32805936 None:intergenic 30.0%
ACACCAACAATTAACACAAA+TGG - Chr6:32807227-32807246 None:intergenic 30.0%
ACACCATTTGTGTTAATTGT+TGG + Chr6:32807221-32807240 MsG0680032055.01.T01:intron 30.0%
ACACTGAGATGAAATCAATT+TGG + Chr6:32805207-32805226 MsG0680032055.01.T01:intron 30.0%
AGTAGTAAAATCACACAACA+CGG - Chr6:32810062-32810081 None:intergenic 30.0%
AGTTGTTTATCCAAGTGATT+GGG - Chr6:32804258-32804277 None:intergenic 30.0%
ATATATCTTAGAGACTTTGC+TGG - Chr6:32807461-32807480 None:intergenic 30.0%
ATCATAGCTACCAAGAAATA+TGG - Chr6:32810194-32810213 None:intergenic 30.0%
ATTCAACACAAAACGTGTTA+TGG - Chr6:32803252-32803271 None:intergenic 30.0%
ATTGCAAGACAAATTTGAGT+AGG - Chr6:32805925-32805944 None:intergenic 30.0%
ATTGTCTTAAAAGCAAATGG+TGG - Chr6:32807912-32807931 None:intergenic 30.0%
CAAGCATTTATCCAATTGTT+AGG + Chr6:32810298-32810317 MsG0680032055.01.T01:three_prime_UTR 30.0%
CAAGTTCTATTCACACTTTA+TGG + Chr6:32807994-32808013 MsG0680032055.01.T01:intron 30.0%
CAGTGAGTGATTAATCAATT+TGG + Chr6:32805383-32805402 MsG0680032055.01.T01:intron 30.0%
CATTCAGTACCAAACATAAA+AGG + Chr6:32804082-32804101 MsG0680032055.01.T01:intron 30.0%
CCAAACACACATTAACTATT+TGG + Chr6:32805246-32805265 MsG0680032055.01.T01:intron 30.0%
CCAAATAGTTAATGTGTGTT+TGG - Chr6:32805249-32805268 None:intergenic 30.0%
CCGTGATTGATATACAATTA+TGG + Chr6:32803921-32803940 MsG0680032055.01.T01:intron 30.0%
CTAAACTTGACTACCTTAAT+AGG + Chr6:32806724-32806743 MsG0680032055.01.T01:intron 30.0%
CTTAGAATTATGATCAGTGA+TGG - Chr6:32803464-32803483 None:intergenic 30.0%
CTTCTTAAGGAATCCAATAA+AGG - Chr6:32810019-32810038 None:intergenic 30.0%
GAAAATTGTGAGAGAAAAGT+TGG - Chr6:32809493-32809512 None:intergenic 30.0%
GAATAAATCTTGCCTTTCTT+TGG - Chr6:32807269-32807288 None:intergenic 30.0%
GAGCAAATAGAAACTTAAGA+AGG - Chr6:32806645-32806664 None:intergenic 30.0%
TAAATATCAATAGAGAGCAG+AGG - Chr6:32807142-32807161 None:intergenic 30.0%
TACTGTAGCAAAATTTGAAC+AGG + Chr6:32805155-32805174 MsG0680032055.01.T01:intron 30.0%
TCAACATGACTATAAATTGC+AGG - Chr6:32804658-32804677 None:intergenic 30.0%
TCAAGACTTCAATATATTGG+TGG - Chr6:32804588-32804607 None:intergenic 30.0%
TCATAGCTACCAAGAAATAT+GGG - Chr6:32810193-32810212 None:intergenic 30.0%
TGGTGAAACTAGGAATTATA+TGG - Chr6:32808221-32808240 None:intergenic 30.0%
TTACCATGGATAACCTATTA+AGG - Chr6:32806740-32806759 None:intergenic 30.0%
TTCATGAATCAAGCATTACT+AGG + Chr6:32806670-32806689 MsG0680032055.01.T01:intron 30.0%
TTGCAAGACAAATTTGAGTA+GGG - Chr6:32805924-32805943 None:intergenic 30.0%
TTGTCTTAAAAGCAAATGGT+GGG - Chr6:32807911-32807930 None:intergenic 30.0%
TTTATTTGGTATTAACACCC+TGG + Chr6:32804135-32804154 MsG0680032055.01.T01:intron 30.0%
TTTCATCATGGTTAGTGAAA+TGG + Chr6:32805043-32805062 MsG0680032055.01.T01:intron 30.0%
! CGATTGATTCATTCATTCAT+TGG + Chr6:32803160-32803179 MsG0680032055.01.T01:five_prime_UTR 30.0%
! GGAAATCAGAAACAGTTTTA+TGG + Chr6:32809274-32809293 MsG0680032055.01.T01:intron 30.0%
! TGAAATGTCAAAAGCTGTTT+TGG + Chr6:32804404-32804423 MsG0680032055.01.T01:intron 30.0%
! TGACAGTTTAAAACCTTCTA+GGG + Chr6:32805750-32805769 MsG0680032055.01.T01:intron 30.0%
! TTACATTGCTGTTGTAATTG+TGG + Chr6:32803973-32803992 MsG0680032055.01.T01:intron 30.0%
! TTGACAGTTTAAAACCTTCT+AGG + Chr6:32805749-32805768 MsG0680032055.01.T01:intron 30.0%
!! AAAAAGGTTGATATGGAGTA+AGG + Chr6:32803746-32803765 MsG0680032055.01.T01:intron 30.0%
!! AGTCTCTAAGATATATTGGA+AGG + Chr6:32807465-32807484 MsG0680032055.01.T01:CDS 30.0%
!! ATTTTGTTATATGTGTAGGC+TGG + Chr6:32804717-32804736 MsG0680032055.01.T01:intron 30.0%
!! GATGAGTTCTAAACTTCTTA+AGG - Chr6:32810032-32810051 None:intergenic 30.0%
!! GCAAAGTCTCTAAGATATAT+TGG + Chr6:32807461-32807480 MsG0680032055.01.T01:CDS 30.0%
!! TGTTTTGAATAGTGTAGTTG+TGG + Chr6:32804499-32804518 MsG0680032055.01.T01:intron 30.0%
!! TTGATGATTTTGGTGAAACT+AGG - Chr6:32808231-32808250 None:intergenic 30.0%
!!! ACTTAATTTTTGGTCGGATA+TGG + Chr6:32804858-32804877 MsG0680032055.01.T01:intron 30.0%
!!! CTGACTAAAGATTTTTAGTG+GGG + Chr6:32808629-32808648 MsG0680032055.01.T01:intron 30.0%
!!! CTTAATTTTTGGTCGGATAT+GGG + Chr6:32804859-32804878 MsG0680032055.01.T01:intron 30.0%
!!! GACACTCATTTTAAAACAGA+GGG - Chr6:32809383-32809402 None:intergenic 30.0%
!!! GTTGTTTTTGATCCATTAGA+CGG + Chr6:32805847-32805866 MsG0680032055.01.T01:CDS 30.0%
!!! GTTTTTTATTGAACTGATGC+CGG + Chr6:32806924-32806943 MsG0680032055.01.T01:intron 30.0%
!!! TTTGAAGGATTTTCAAGTAC+CGG + Chr6:32807025-32807044 MsG0680032055.01.T01:intron 30.0%
AAATGCAAGTTTCCAACAGA+TGG + Chr6:32807431-32807450 MsG0680032055.01.T01:CDS 35.0%
ACAAAATAGAGGCTTAAGTC+CGG - Chr6:32808427-32808446 None:intergenic 35.0%
ACGTGTTAATGTTTGTGTTG+TGG + Chr6:32803879-32803898 MsG0680032055.01.T01:intron 35.0%
AGAGTCCAAATGGAAAACTT+CGG + Chr6:32808973-32808992 MsG0680032055.01.T01:CDS 35.0%
ATACATCACATAAGTCTGAG+TGG - Chr6:32808732-32808751 None:intergenic 35.0%
ATTGATTGTGGTGTTTCCAT+TGG + Chr6:32805880-32805899 MsG0680032055.01.T01:CDS 35.0%
CAAACATTAACACGTCAACA+TGG - Chr6:32803874-32803893 None:intergenic 35.0%
CTACCTTAATAGGTTATCCA+TGG + Chr6:32806734-32806753 MsG0680032055.01.T01:intron 35.0%
CTGAAAAACCAACTATGAAG+TGG - Chr6:32807824-32807843 None:intergenic 35.0%
GAAAGATCTCCCATATTTCT+TGG + Chr6:32810181-32810200 MsG0680032055.01.T01:CDS 35.0%
GACAAATTTGAGTAGGGATT+AGG - Chr6:32805918-32805937 None:intergenic 35.0%
GATCTTTCATGCAACTTTGT+TGG - Chr6:32810169-32810188 None:intergenic 35.0%
GCAAAATGTTCAATTGACAC+CGG - Chr6:32806212-32806231 None:intergenic 35.0%
GCCAGTAGTTAAACTCAAAT+AGG + Chr6:32807776-32807795 MsG0680032055.01.T01:intron 35.0%
GTTCATCGTACATTGCTATA+TGG + Chr6:32808921-32808940 MsG0680032055.01.T01:CDS 35.0%
GTTGAGAGGTAAGTAAAATC+TGG + Chr6:32804194-32804213 MsG0680032055.01.T01:intron 35.0%
TAAAAGGCTTAGACCCTATT+TGG + Chr6:32804098-32804117 MsG0680032055.01.T01:intron 35.0%
TACAGATTCTCAACTCTAGA+AGG + Chr6:32807491-32807510 MsG0680032055.01.T01:intron 35.0%
TAGTTGCTCATAGCTTAGTT+AGG - Chr6:32809888-32809907 None:intergenic 35.0%
TCATACTAACCGGATATTTC+CGG + Chr6:32806190-32806209 MsG0680032055.01.T01:intron 35.0%
TGCAGAACATCTTCTATGAT+TGG - Chr6:32806273-32806292 None:intergenic 35.0%
TGTGATCTGATCATAACTCA+TGG + Chr6:32808314-32808333 MsG0680032055.01.T01:intron 35.0%
TGTTTGTTCTGCTGTTAACA+AGG + Chr6:32803346-32803365 MsG0680032055.01.T01:CDS 35.0%
TTGTGTTAATTGTTGGTGTG+TGG + Chr6:32807228-32807247 MsG0680032055.01.T01:intron 35.0%
! AAGATTTATTCGGTGAACGA+AGG + Chr6:32807278-32807297 MsG0680032055.01.T01:CDS 35.0%
! AAGCCTCTATTTTGTACACT+TGG + Chr6:32808432-32808451 MsG0680032055.01.T01:intron 35.0%
! ACATACCGAAGTTTTCCATT+TGG - Chr6:32808981-32809000 None:intergenic 35.0%
! AGATTAGTCATCGGTAAAGT+CGG - Chr6:32808495-32808514 None:intergenic 35.0%
! AGATTTATTCGGTGAACGAA+GGG + Chr6:32807279-32807298 MsG0680032055.01.T01:CDS 35.0%
! CATCTTCTATGATTGGTTCA+TGG - Chr6:32806266-32806285 None:intergenic 35.0%
! CTGTTCTTGTTATGTGTAGA+AGG + Chr6:32806158-32806177 MsG0680032055.01.T01:intron 35.0%
! GCCTATTTGAGTTTAACTAC+TGG - Chr6:32807780-32807799 None:intergenic 35.0%
! GGAGTATTACCTTAATGTCA+GGG - Chr6:32806540-32806559 None:intergenic 35.0%
! GTCTGTCGTTGAAATTTTGA+AGG + Chr6:32807010-32807029 MsG0680032055.01.T01:intron 35.0%
! TAAGTGTGTGTTTGGAATTG+CGG + Chr6:32804039-32804058 MsG0680032055.01.T01:intron 35.0%
! TCACAACAGAGATTAGTCAT+CGG - Chr6:32808504-32808523 None:intergenic 35.0%
! TTTGGTACTGAATGCGATAA+TGG - Chr6:32804076-32804095 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + Chr6:32809621-32809640 MsG0680032055.01.T01:intron 35.0%
!! GTCAAGCTCTAAACAAATAC+TGG - Chr6:32807120-32807139 None:intergenic 35.0%
!! TTTTGAAGATTCTGCAACGA+TGG + Chr6:32803190-32803209 MsG0680032055.01.T01:intron 35.0%
!!! ATTTTGAGTTACCATGCTCA+GGG + Chr6:32803438-32803457 MsG0680032055.01.T01:intron 35.0%
!!! CGACACTCATTTTAAAACAG+AGG - Chr6:32809384-32809403 None:intergenic 35.0%
!!! GATGTTTTAACAGTGCATCT+TGG + Chr6:32805445-32805464 MsG0680032055.01.T01:intron 35.0%
!!! TGAGTTTTCATGTTTTGGTG+TGG + Chr6:32808263-32808282 MsG0680032055.01.T01:intron 35.0%
AAAGTTGGAGAGGGTAAAGT+TGG - Chr6:32809478-32809497 None:intergenic 40.0%
AACACCACAATCAATGTTGG+AGG - Chr6:32805875-32805894 None:intergenic 40.0%
AAGCACTCGTGAGATTGTTT+GGG - Chr6:32807754-32807773 None:intergenic 40.0%
AATGTCCTTCTTGATGGAAC+AGG + Chr6:32809116-32809135 MsG0680032055.01.T01:CDS 40.0%
ACGTAAGTGCAGAAAACCTA+TGG - Chr6:32803410-32803429 None:intergenic 40.0%
AGATCTCTTAGGTAAGGTCT+CGG - Chr6:32808699-32808718 None:intergenic 40.0%
AGATGAGGATGCAATATTCG+TGG + Chr6:32805478-32805497 MsG0680032055.01.T01:CDS 40.0%
ATAGAAGATGTTCTGCAACC+AGG + Chr6:32806276-32806295 MsG0680032055.01.T01:CDS 40.0%
ATCAAGCCACCATAAAGACA+AGG - Chr6:32806834-32806853 None:intergenic 40.0%
ATTGCCCACAAAAGTTGAAC+CGG + Chr6:32808405-32808424 MsG0680032055.01.T01:intron 40.0%
CAATTGACACCGGAAATATC+CGG - Chr6:32806202-32806221 None:intergenic 40.0%
CAGACCTTTAAGTGTGTGTT+TGG + Chr6:32804031-32804050 MsG0680032055.01.T01:intron 40.0%
CAGTTAAACTTCTCCCTAGA+AGG - Chr6:32805766-32805785 None:intergenic 40.0%
CATCATGGTTAGTGAAATGG+AGG + Chr6:32805046-32805065 MsG0680032055.01.T01:intron 40.0%
CATCGTACATTGCTATATGG+AGG + Chr6:32808924-32808943 MsG0680032055.01.T01:CDS 40.0%
GAACTCAGATCTCTTAGGTA+AGG - Chr6:32808705-32808724 None:intergenic 40.0%
GAACTGAACTCAGATCTCTT+AGG - Chr6:32808710-32808729 None:intergenic 40.0%
GCTGACAAAAAGAGTCCAAA+TGG + Chr6:32808963-32808982 MsG0680032055.01.T01:CDS 40.0%
GGAAACACCACAATCAATGT+TGG - Chr6:32805878-32805897 None:intergenic 40.0%
GGTAATACTCCGCTAACTTA+TGG + Chr6:32806549-32806568 MsG0680032055.01.T01:intron 40.0%
GGTTGAAGAGACATCAAAAG+TGG + Chr6:32803942-32803961 MsG0680032055.01.T01:intron 40.0%
GTAAGGACACTCCTCTTATT+AGG + Chr6:32803763-32803782 MsG0680032055.01.T01:intron 40.0%
GTTAATGTTTGTGTTGTGGC+TGG + Chr6:32803883-32803902 MsG0680032055.01.T01:intron 40.0%
GTTCCATCAAGAAGGACATT+GGG - Chr6:32809116-32809135 None:intergenic 40.0%
TAAGCACTCGTGAGATTGTT+TGG - Chr6:32807755-32807774 None:intergenic 40.0%
TAGAAGATGTTCTGCAACCA+GGG + Chr6:32806277-32806296 MsG0680032055.01.T01:CDS 40.0%
TAGGGATCATACAGTTCCAA+TGG - Chr6:32805899-32805918 None:intergenic 40.0%
TATAAGCAACGATGGCACAA+AGG + Chr6:32806958-32806977 MsG0680032055.01.T01:intron 40.0%
TCACAGACACTTCATATCGA+AGG + Chr6:32805959-32805978 MsG0680032055.01.T01:intron 40.0%
TCCTTCCAAAAATCGAACTC+AGG + Chr6:32804228-32804247 MsG0680032055.01.T01:intron 40.0%
TCTTTGCAGATCCCAAAGAA+AGG + Chr6:32807254-32807273 MsG0680032055.01.T01:intron 40.0%
TGCTTATACGGTCACTTAAC+CGG - Chr6:32806946-32806965 None:intergenic 40.0%
TGGTAGCTATGATGATATCG+AGG + Chr6:32810201-32810220 MsG0680032055.01.T01:CDS 40.0%
TGGTTAGTGAAATGGAGGTT+TGG + Chr6:32805051-32805070 MsG0680032055.01.T01:intron 40.0%
TGTCTTTATGGTGGCTTGAT+TGG + Chr6:32806834-32806853 MsG0680032055.01.T01:intron 40.0%
TGTGAGAGAAAAGTTGGAGA+GGG - Chr6:32809487-32809506 None:intergenic 40.0%
TGTTCCATCAAGAAGGACAT+TGG - Chr6:32809117-32809136 None:intergenic 40.0%
TTGCAGTTTGTGATAACCAC+TGG + Chr6:32806457-32806476 MsG0680032055.01.T01:intron 40.0%
TTGGTACGTACGTAGTTGAT+TGG + Chr6:32803128-32803147 MsG0680032055.01.T01:five_prime_UTR 40.0%
TTGTGAGAGAAAAGTTGGAG+AGG - Chr6:32809488-32809507 None:intergenic 40.0%
TTGTGCCATCGTTGCTTATA+CGG - Chr6:32806958-32806977 None:intergenic 40.0%
TTTGTCAGCAGGGTACAAAA+AGG - Chr6:32808952-32808971 None:intergenic 40.0%
TTTGTGATAACCACTGGAAG+TGG + Chr6:32806463-32806482 MsG0680032055.01.T01:CDS 40.0%
! AACTTGCTCATTTCGAGGTA+GGG + Chr6:32806700-32806719 MsG0680032055.01.T01:intron 40.0%
! AAGTCCGGTTCAACTTTTGT+GGG - Chr6:32808412-32808431 None:intergenic 40.0%
! ACCAACACATGTCTGAAACT+GGG - Chr6:32803794-32803813 None:intergenic 40.0%
! ATACGAACTTGCTCATTTCG+AGG + Chr6:32806695-32806714 MsG0680032055.01.T01:intron 40.0%
! CGGAGTATTACCTTAATGTC+AGG - Chr6:32806541-32806560 None:intergenic 40.0%
! CTTGGTTTCTGAAGAAGATG+AGG + Chr6:32805463-32805482 MsG0680032055.01.T01:CDS 40.0%
! GAGAACCTGAGTTCGATTTT+TGG - Chr6:32804236-32804255 None:intergenic 40.0%
! GCACTTGTTAGCCTAACAAT+TGG - Chr6:32810312-32810331 None:intergenic 40.0%
! GGGTCTAAGCCTTTTATGTT+TGG - Chr6:32804094-32804113 None:intergenic 40.0%
! TAAGTCCGGTTCAACTTTTG+TGG - Chr6:32808413-32808432 None:intergenic 40.0%
! TACGAAGCTCTGATACTTCT+CGG + Chr6:32803512-32803531 MsG0680032055.01.T01:intron 40.0%
! TCACTAAATCAGAAGCGTAC+AGG + Chr6:32809944-32809963 MsG0680032055.01.T01:intron 40.0%
! TTGGACTCTTTTTGTCAGCA+GGG - Chr6:32808962-32808981 None:intergenic 40.0%
! TTTGGACTCTTTTTGTCAGC+AGG - Chr6:32808963-32808982 None:intergenic 40.0%
!! ACCTGAGTTCGATTTTTGGA+AGG - Chr6:32804232-32804251 None:intergenic 40.0%
!! ATGAGTGTCGCTTTAAGCTT+TGG - Chr6:32809614-32809633 None:intergenic 40.0%
!! CACAAATGGTGTTGATACTC+AGG - Chr6:32807213-32807232 None:intergenic 40.0%
!! TTCCAATGAGGTGTTTTGCA+AGG + Chr6:32805339-32805358 MsG0680032055.01.T01:CDS 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + Chr6:32809625-32809644 MsG0680032055.01.T01:intron 40.0%
!!! GATTTTCAAGTACCGGTCTA+TGG + Chr6:32807032-32807051 MsG0680032055.01.T01:intron 40.0%
!!! GATTTTGAGTTACCATGCTC+AGG + Chr6:32803437-32803456 MsG0680032055.01.T01:intron 40.0%
!!! TTGCTTACTGCCCTTGTTTT+AGG + Chr6:32807522-32807541 MsG0680032055.01.T01:intron 40.0%
AATCACACAACACGGCATGT+TGG - Chr6:32810054-32810073 None:intergenic 45.0%
ACATATACGGACACAGACAC+CGG - Chr6:32803646-32803665 None:intergenic 45.0%
ACCAACTATGAAGTGGCCTA+AGG - Chr6:32807817-32807836 None:intergenic 45.0%
ACCATTAACACCACTTCCAG+TGG - Chr6:32806476-32806495 None:intergenic 45.0%
ACCCTGGTTTCTTTGACAAG+CGG + Chr6:32804151-32804170 MsG0680032055.01.T01:intron 45.0%
ACGTCGTCAAAACCGTAGAT+TGG - Chr6:32804007-32804026 None:intergenic 45.0%
ACTCTTCACTAAAGGGTCTG+TGG - Chr6:32808350-32808369 None:intergenic 45.0%
ACTGGGACATGCCTAATAAG+AGG - Chr6:32803777-32803796 None:intergenic 45.0%
AGCCTTGCAAAACACCTCAT+TGG - Chr6:32805344-32805363 None:intergenic 45.0%
AGGATAAACTCGCCAAGAGA+AGG - Chr6:32806511-32806530 None:intergenic 45.0%
AGTGACCGTATAAGCAACGA+TGG + Chr6:32806950-32806969 MsG0680032055.01.T01:intron 45.0%
ATGCATTACCCTTTCCTTGC+CGG - Chr6:32809160-32809179 None:intergenic 45.0%
ATTCATACGTACGCAGCAGT+AGG - Chr6:32807326-32807345 None:intergenic 45.0%
CAAAGCTCTTTATGCTGCAG+AGG + Chr6:32810228-32810247 MsG0680032055.01.T01:CDS 45.0%
CAACCAAACTCCGGATTACT+AGG - Chr6:32804178-32804197 None:intergenic 45.0%
CAATGATCGAATACGCCCAT+TGG + Chr6:32806791-32806810 MsG0680032055.01.T01:intron 45.0%
CACACTCCTTGTCTTTATGG+TGG + Chr6:32806825-32806844 MsG0680032055.01.T01:intron 45.0%
CCAACTATGAAGTGGCCTAA+GGG - Chr6:32807816-32807835 None:intergenic 45.0%
CCACAGAGAGCCTAAAACAA+GGG - Chr6:32807535-32807554 None:intergenic 45.0%
CCTAACTCACCCTGACATTA+AGG + Chr6:32806528-32806547 MsG0680032055.01.T01:CDS 45.0%
CCTTAATGTCAGGGTGAGTT+AGG - Chr6:32806531-32806550 None:intergenic 45.0%
CTACAGTGGACCAATTCGAT+AGG - Chr6:32807065-32807084 None:intergenic 45.0%
CTTACCTCTCAACCAAACTC+CGG - Chr6:32804187-32804206 None:intergenic 45.0%
CTTCCCAATGTCCTTCTTGA+TGG + Chr6:32809110-32809129 MsG0680032055.01.T01:CDS 45.0%
GATCTCTTAGGTAAGGTCTC+GGG - Chr6:32808698-32808717 None:intergenic 45.0%
GCAGCTGGTTATTGCATGTA+CGG + Chr6:32806312-32806331 MsG0680032055.01.T01:CDS 45.0%
GCTCTGATACTTCTCGGATT+AGG + Chr6:32803518-32803537 MsG0680032055.01.T01:intron 45.0%
GCTGGATGTTCTTTCCAATG+AGG + Chr6:32805327-32805346 MsG0680032055.01.T01:CDS 45.0%
GGATAAACTCGCCAAGAGAA+GGG - Chr6:32806510-32806529 None:intergenic 45.0%
GGGAACACTTACCTGAACAT+TGG - Chr6:32804775-32804794 None:intergenic 45.0%
GTATGGAACCTAGCATAACG+TGG + Chr6:32809856-32809875 MsG0680032055.01.T01:intron 45.0%
GTGAAATCTCCACGTGATTC+AGG - Chr6:32803290-32803309 None:intergenic 45.0%
GTGGTTAAGCTGCCAATCTA+CGG + Chr6:32803992-32804011 MsG0680032055.01.T01:intron 45.0%
TAATCCGGAGTTTGGTTGAG+AGG + Chr6:32804180-32804199 MsG0680032055.01.T01:intron 45.0%
TCCACAGAGAGCCTAAAACA+AGG - Chr6:32807536-32807555 None:intergenic 45.0%
TCCCAGTTTCAGACATGTGT+TGG + Chr6:32803790-32803809 MsG0680032055.01.T01:intron 45.0%
TCTAAGCATCCTGAATCACG+TGG + Chr6:32803278-32803297 MsG0680032055.01.T01:CDS 45.0%
TGCTGCAGAGGCTAAATAAG+AGG + Chr6:32810240-32810259 MsG0680032055.01.T01:intron 45.0%
TGTGAGCTTCTACTTCCAGA+AGG + Chr6:32806983-32807002 MsG0680032055.01.T01:intron 45.0%
TTTGCTGGTGAACCATCTGT+TGG - Chr6:32807446-32807465 None:intergenic 45.0%
! ACCACTGGAAGTGGTGTTAA+TGG + Chr6:32806472-32806491 MsG0680032055.01.T01:CDS 45.0%
! ATATCGAAGGCATGCATGTC+TGG + Chr6:32805972-32805991 MsG0680032055.01.T01:intron 45.0%
! ATTTTGTCGCGGTTGCATTG+TGG + Chr6:32805599-32805618 MsG0680032055.01.T01:CDS 45.0%
! CACCAACACATGTCTGAAAC+TGG - Chr6:32803795-32803814 None:intergenic 45.0%
! GAACTTGCTCATTTCGAGGT+AGG + Chr6:32806699-32806718 MsG0680032055.01.T01:intron 45.0%
! TGCAAGGCTTTGATAAGCAG+TGG + Chr6:32805355-32805374 MsG0680032055.01.T01:CDS 45.0%
! TTGCAGTAGCGATTTTGTCG+CGG + Chr6:32805588-32805607 MsG0680032055.01.T01:intron 45.0%
!! TTCTCGGATTAGGAGTGTCT+CGG + Chr6:32803528-32803547 MsG0680032055.01.T01:intron 45.0%
!! TTTCAAGTACCGGTCTATGG+TGG + Chr6:32807035-32807054 MsG0680032055.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + Chr6:32809624-32809643 MsG0680032055.01.T01:intron 45.0%
!! AAAAAAAAAATAGTAATAAA+CGG + Chr6:32809720-32809739 MsG0680032055.01.T01:intron 5.0%
!! AAAAAATATATATTATATAC+AGG - Chr6:32809972-32809991 None:intergenic 5.0%
!!! AAATTTTTTATTTATTTTGT+TGG - Chr6:32808839-32808858 None:intergenic 5.0%
!!! TTAAATTTTTTTTCTTTTTA+CGG + Chr6:32809770-32809789 MsG0680032055.01.T01:intron 5.0%
AACAACTTTCCACGCTGCGT+AGG - Chr6:32805506-32805525 None:intergenic 50.0%
ACCAGATGCCGGTGTAATCA+AGG + Chr6:32805624-32805643 MsG0680032055.01.T01:CDS 50.0%
ACCTTGATTACACCGGCATC+TGG - Chr6:32805628-32805647 None:intergenic 50.0%
AGTAGGACCATCCCAGTTCT+TGG - Chr6:32807309-32807328 None:intergenic 50.0%
ATGTTGGAGGAGCCGTCTAA+TGG - Chr6:32805862-32805881 None:intergenic 50.0%
CAACGACAGACATTGCCTTC+TGG - Chr6:32807001-32807020 None:intergenic 50.0%
CACACATGTCTGTGTCATGC+CGG - Chr6:32806024-32806043 None:intergenic 50.0%
CATGTACGGAAGCTCTTGCA+CGG + Chr6:32806326-32806345 MsG0680032055.01.T01:CDS 50.0%
CCCGCTTGTCAAAGAAACCA+GGG - Chr6:32804155-32804174 None:intergenic 50.0%
CCCTGGTTTCTTTGACAAGC+GGG + Chr6:32804152-32804171 MsG0680032055.01.T01:intron 50.0%
CCCTTAGGCCACTTCATAGT+TGG + Chr6:32807813-32807832 MsG0680032055.01.T01:intron 50.0%
CTCAGGTTCTCCCAATCACT+TGG + Chr6:32804245-32804264 MsG0680032055.01.T01:intron 50.0%
GCAACCAGGGAAGAACATGT+TGG + Chr6:32806290-32806309 MsG0680032055.01.T01:CDS 50.0%
GCGCACACTCCTTGTCTTTA+TGG + Chr6:32806822-32806841 MsG0680032055.01.T01:intron 50.0%
GGATAGCTCCACGTTATGCT+AGG - Chr6:32809867-32809886 None:intergenic 50.0%
TCCTGCCTGTTCCATCAAGA+AGG - Chr6:32809124-32809143 None:intergenic 50.0%
TCCTTCTTGATGGAACAGGC+AGG + Chr6:32809120-32809139 MsG0680032055.01.T01:CDS 50.0%
TGCAGGAGAGACCAATGTTC+AGG + Chr6:32804761-32804780 MsG0680032055.01.T01:CDS 50.0%
TGTCTGTGTCATGCCGGTAT+CGG - Chr6:32806018-32806037 None:intergenic 50.0%
TGTGCGCTTCTACTGCCAAT+GGG - Chr6:32806809-32806828 None:intergenic 50.0%
TTCACCCTTGACCCTTCTCT+TGG + Chr6:32806496-32806515 MsG0680032055.01.T01:CDS 50.0%
TTCTTGATGGAACAGGCAGG+AGG + Chr6:32809123-32809142 MsG0680032055.01.T01:CDS 50.0%
TTGATTACACCGGCATCTGG+TGG - Chr6:32805625-32805644 None:intergenic 50.0%
! AAGTGGCCTAAGGGCATGTT+TGG - Chr6:32807807-32807826 None:intergenic 50.0%
! GGCTCCTCCAACATTGATTG+TGG + Chr6:32805868-32805887 MsG0680032055.01.T01:CDS 50.0%
! GTGTGTGTTTGGAATTGCGG+TGG + Chr6:32804042-32804061 MsG0680032055.01.T01:intron 50.0%
! TGCTCAGCTCTGACGAAAGT+CGG + Chr6:32806617-32806636 MsG0680032055.01.T01:intron 50.0%
! TGTGTTTGGAATTGCGGTGG+TGG + Chr6:32804045-32804064 MsG0680032055.01.T01:intron 50.0%
!! GATTAGGAGTGTCTCGGTGT+AGG + Chr6:32803534-32803553 MsG0680032055.01.T01:intron 50.0%
!!! CCCTTGTTTTAGGCTCTCTG+TGG + Chr6:32807532-32807551 MsG0680032055.01.T01:intron 50.0%
ACGAAGGGAACGCCAAGAAC+TGG + Chr6:32807294-32807313 MsG0680032055.01.T01:CDS 55.0%
ACTCGCCAAGAGAAGGGTCA+AGG - Chr6:32806504-32806523 None:intergenic 55.0%
AGGCTTTCACCGGCAAGGAA+AGG + Chr6:32809148-32809167 MsG0680032055.01.T01:CDS 55.0%
ATCAGTGATGGCCCTGAGCA+TGG - Chr6:32803452-32803471 None:intergenic 55.0%
CACAGACACCGGACACGATA+CGG - Chr6:32803635-32803654 None:intergenic 55.0%
CGAAGGGAACGCCAAGAACT+GGG + Chr6:32807295-32807314 MsG0680032055.01.T01:CDS 55.0%
CGTGTGTCTGTGTCCGATAC+CGG + Chr6:32806002-32806021 MsG0680032055.01.T01:intron 55.0%
CTCGCCAAGAGAAGGGTCAA+GGG - Chr6:32806503-32806522 None:intergenic 55.0%
GACAAGCGGGCCTAGTAATC+CGG + Chr6:32804165-32804184 MsG0680032055.01.T01:intron 55.0%
GACTTTCGTCAGAGCTGAGC+AGG - Chr6:32806618-32806637 None:intergenic 55.0%
GCCAGTCCAAACATGCCCTT+AGG + Chr6:32807798-32807817 MsG0680032055.01.T01:intron 55.0%
GCCCGCTTGTCAAAGAAACC+AGG - Chr6:32804156-32804175 None:intergenic 55.0%
GCGAAGCTCATTGGACTTGC+AGG + Chr6:32804744-32804763 MsG0680032055.01.T01:CDS 55.0%
GCTGCCAACATGTTCTTCCC+TGG - Chr6:32806297-32806316 None:intergenic 55.0%
GGCTTTCACCGGCAAGGAAA+GGG + Chr6:32809149-32809168 MsG0680032055.01.T01:CDS 55.0%
GGGAAGAACATGTTGGCAGC+TGG + Chr6:32806297-32806316 MsG0680032055.01.T01:CDS 55.0%
GGGCCTAGTAATCCGGAGTT+TGG + Chr6:32804172-32804191 MsG0680032055.01.T01:intron 55.0%
GGGCGAAGAACAGAAGAAGC+TGG + Chr6:32805309-32805328 MsG0680032055.01.T01:intron 55.0%
GTCAGTGTCCGTATCGTGTC+CGG + Chr6:32803624-32803643 MsG0680032055.01.T01:intron 55.0%
GTGTGCGCTTCTACTGCCAA+TGG - Chr6:32806810-32806829 None:intergenic 55.0%
TACGATGTGCATCTGCGCTG+TGG - Chr6:32803217-32803236 None:intergenic 55.0%
! GCCTAAGGGCATGTTTGGAC+TGG - Chr6:32807802-32807821 None:intergenic 55.0%
! GCTCAGCTCTGACGAAAGTC+GGG + Chr6:32806618-32806637 MsG0680032055.01.T01:intron 55.0%
! TGCGGGAGCTTTAGTGCACT+TGG - Chr6:32807866-32807885 None:intergenic 55.0%
!! GCTGGTCTTGCGAAGCTCAT+TGG + Chr6:32804735-32804754 MsG0680032055.01.T01:CDS 55.0%
ACTAAAGCTCCCGCAGACGC+AGG + Chr6:32807871-32807890 MsG0680032055.01.T01:intron 60.0%
AGGACAGGCTTTCACCGGCA+AGG + Chr6:32809143-32809162 MsG0680032055.01.T01:CDS 60.0%
CTAAAGCTCCCGCAGACGCA+GGG + Chr6:32807872-32807891 MsG0680032055.01.T01:intron 60.0%
GATGGAACAGGCAGGAGGAC+AGG + Chr6:32809128-32809147 MsG0680032055.01.T01:CDS 60.0%
GCAGGAGGACAGGCTTTCAC+CGG + Chr6:32809138-32809157 MsG0680032055.01.T01:CDS 60.0%
GCATTGTGGCCACCAGATGC+CGG + Chr6:32805613-32805632 MsG0680032055.01.T01:CDS 60.0%
GGGAACGCCAAGAACTGGGA+TGG + Chr6:32807299-32807318 MsG0680032055.01.T01:CDS 60.0%
GGTCTCGGGTTCGAGTCTTG+TGG - Chr6:32808684-32808703 None:intergenic 60.0%
TTCGTCAGAGCTGAGCAGGC+AGG - Chr6:32806614-32806633 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+TGG - Chr6:32807899-32807918 None:intergenic 60.0%
CAGACGCAGGGTCCAGGAAG+GGG + Chr6:32807884-32807903 MsG0680032055.01.T01:intron 65.0%
CTTCCTGGACCCTGCGTCTG+CGG - Chr6:32807884-32807903 None:intergenic 65.0%
GCAGACGCAGGGTCCAGGAA+GGG + Chr6:32807883-32807902 MsG0680032055.01.T01:intron 65.0%
TTCCTGGACCCTGCGTCTGC+GGG - Chr6:32807883-32807902 None:intergenic 65.0%
TTCGTGGAGCCTACGCAGCG+TGG + Chr6:32805494-32805513 MsG0680032055.01.T01:CDS 65.0%
CGCAGACGCAGGGTCCAGGA+AGG + Chr6:32807882-32807901 MsG0680032055.01.T01:intron 70.0%
CTCCCGCAGACGCAGGGTCC+AGG + Chr6:32807878-32807897 MsG0680032055.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 32803061 32810404 32803061 ID=MsG0680032055.01;Name=MsG0680032055.01
Chr6 mRNA 32803063 32810404 32803063 ID=MsG0680032055.01.T01;Parent=MsG0680032055.01;Name=MsG0680032055.01.T01;_AED=0.48;_eAED=0.51;_QI=123|0.84|0.78|1|0.76|0.64|14|146|378
Chr6 exon 32803063 32803180 32803063 ID=MsG0680032055.01.T01:exon:18119;Parent=MsG0680032055.01.T01
Chr6 exon 32803204 32803367 32803204 ID=MsG0680032055.01.T01:exon:18120;Parent=MsG0680032055.01.T01
Chr6 five_prime_UTR 32803063 32803180 32803063 ID=MsG0680032055.01.T01:five_prime_utr;Parent=MsG0680032055.01.T01
Chr6 five_prime_UTR 32803204 32803208 32803204 ID=MsG0680032055.01.T01:five_prime_utr;Parent=MsG0680032055.01.T01
Chr6 CDS 32803209 32803367 32803209 ID=MsG0680032055.01.T01:cds;Parent=MsG0680032055.01.T01
Chr6 CDS 32804735 32804782 32804735 ID=MsG0680032055.01.T01:cds;Parent=MsG0680032055.01.T01
Chr6 CDS 32805310 32805384 32805310 ID=MsG0680032055.01.T01:cds;Parent=MsG0680032055.01.T01
Chr6 CDS 32805458 32805543 32805458 ID=MsG0680032055.01.T01:cds;Parent=MsG0680032055.01.T01
Chr6 CDS 32805597 32805664 32805597 ID=MsG0680032055.01.T01:cds;Parent=MsG0680032055.01.T01
Chr6 CDS 32805815 32805906 32805815 ID=MsG0680032055.01.T01:cds;Parent=MsG0680032055.01.T01
Chr6 CDS 32806234 32806347 32806234 ID=MsG0680032055.01.T01:cds;Parent=MsG0680032055.01.T01
Chr6 CDS 32806463 32806549 32806463 ID=MsG0680032055.01.T01:cds;Parent=MsG0680032055.01.T01
Chr6 CDS 32807263 32807333 32807263 ID=MsG0680032055.01.T01:cds;Parent=MsG0680032055.01.T01
Chr6 CDS 32807421 32807486 32807421 ID=MsG0680032055.01.T01:cds;Parent=MsG0680032055.01.T01
Chr6 CDS 32808908 32808994 32808908 ID=MsG0680032055.01.T01:cds;Parent=MsG0680032055.01.T01
Chr6 CDS 32809095 32809170 32809095 ID=MsG0680032055.01.T01:cds;Parent=MsG0680032055.01.T01
Chr6 CDS 32810151 32810258 32810151 ID=MsG0680032055.01.T01:cds;Parent=MsG0680032055.01.T01
Chr6 three_prime_UTR 32810259 32810404 32810259 ID=MsG0680032055.01.T01:three_prime_utr;Parent=MsG0680032055.01.T01
Chr6 mRNA 32803061 32810404 32803061 ID=MsG0680032055.01.T02;Parent=MsG0680032055.01;Name=MsG0680032055.01.T02;_AED=0.48;_eAED=0.51;_QI=148|0.83|0.76|1|0.83|0.76|13|146|378
Chr6 exon 32803061 32803367 32803061 ID=MsG0680032055.01.T02:exon:18133;Parent=MsG0680032055.01.T02
Chr6 five_prime_UTR 32803061 32803208 32803061 ID=MsG0680032055.01.T02:five_prime_utr;Parent=MsG0680032055.01.T02
Chr6 CDS 32803209 32803367 32803209 ID=MsG0680032055.01.T02:cds;Parent=MsG0680032055.01.T02
Chr6 CDS 32804735 32804782 32804735 ID=MsG0680032055.01.T02:cds;Parent=MsG0680032055.01.T02
Chr6 CDS 32805310 32805384 32805310 ID=MsG0680032055.01.T02:cds;Parent=MsG0680032055.01.T02
Chr6 CDS 32805458 32805543 32805458 ID=MsG0680032055.01.T02:cds;Parent=MsG0680032055.01.T02
Chr6 CDS 32805597 32805664 32805597 ID=MsG0680032055.01.T02:cds;Parent=MsG0680032055.01.T02
Chr6 CDS 32805815 32805906 32805815 ID=MsG0680032055.01.T02:cds;Parent=MsG0680032055.01.T02
Chr6 CDS 32806234 32806347 32806234 ID=MsG0680032055.01.T02:cds;Parent=MsG0680032055.01.T02
Chr6 CDS 32806463 32806549 32806463 ID=MsG0680032055.01.T02:cds;Parent=MsG0680032055.01.T02
Chr6 CDS 32807263 32807333 32807263 ID=MsG0680032055.01.T02:cds;Parent=MsG0680032055.01.T02
Chr6 CDS 32807421 32807486 32807421 ID=MsG0680032055.01.T02:cds;Parent=MsG0680032055.01.T02
Chr6 CDS 32808908 32808994 32808908 ID=MsG0680032055.01.T02:cds;Parent=MsG0680032055.01.T02
Chr6 CDS 32809095 32809170 32809095 ID=MsG0680032055.01.T02:cds;Parent=MsG0680032055.01.T02
Chr6 CDS 32810151 32810258 32810151 ID=MsG0680032055.01.T02:cds;Parent=MsG0680032055.01.T02
Chr6 three_prime_UTR 32810259 32810404 32810259 ID=MsG0680032055.01.T02:three_prime_utr;Parent=MsG0680032055.01.T02
Gene Sequence

>MsG0680032055.01.T02

ATGGACCACAGCGCAGATGCACATCGTACAGACTTGATGACCATAACACGTTTTGTGTTGAATGAACAGTCTAAGCATCCTGAATCACGTGGAGATTTCACCATCTTGCTTAATAACATTGTTCTTGGTTGCAAATTTGTTTGTTCTGCTGTTAACAAGGCTGGTCTTGCGAAGCTCATTGGACTTGCAGGAGAGACCAATGTTCAGGGCGAAGAACAGAAGAAGCTGGATGTTCTTTCCAATGAGGTGTTTTGCAAGGCTTTGATAAGCAGTGGCAGAACATGCATCTTGGTTTCTGAAGAAGATGAGGATGCAATATTCGTGGAGCCTACGCAGCGTGGAAAGTTGTTCACTCTCTCTGTTCTTTACGATTTTGTCGCGGTTGCATTGTGGCCACCAGATGCCGGTGTAATCAAGGTTTTGATTGAATTGCAATTCTTCTATTTTTTATTACGATTCAGGTACTGTGTTGTTTTTGATCCATTAGACGGCTCCTCCAACATTGATTGTGGTGTTTCCATTGGAACTATTTTTGGGATTTATATGATGAAAGATAACCATGAACCAATCATAGAAGATGTTCTGCAACCAGGGAAGAACATGTTGGCAGCTGGTTATTGCATGTACGGAAGCTCTTGCACGTTTGTGATAACCACTGGAAGTGGTGTTAATGGTTTCACCCTTGACCCTTCTCTTGGCGAGTTTATCCTAACTCACCCTGACATTAAGATCCCAAAGAAAGGCAAGATTTATTCGGTGAACGAAGGGAACGCCAAGAACTGGGATGGTCCTACTGCTGCTTATGTGGAGAAATGCAAGTTTCCAACAGATGGTTCACCAGCAAAGTCTCTAAGATATATTGGAAGCATGGTAGCTGATGTTCATCGTACATTGCTATATGGAGGTACCTTTTTGTACCCTGCTGACAAAAAGAGTCCAAATGGAAAACTTCGTGTATTGTATGAAGTCTTCCCAATGTCCTTCTTGATGGAACAGGCAGGAGGACAGGCTTTCACCGGCAAGGAAAGGGCACTTGATTTAGTTCCAACAAAGTTGCATGAAAGATCTCCCATATTTCTTGGTAGCTATGATGATATCGAGGAAATCAAAGCTCTTTATGCTGCAGAGGCTAAATAA

>MsG0680032055.01.T01

ATGGACCACAGCGCAGATGCACATCGTACAGACTTGATGACCATAACACGTTTTGTGTTGAATGAACAGTCTAAGCATCCTGAATCACGTGGAGATTTCACCATCTTGCTTAATAACATTGTTCTTGGTTGCAAATTTGTTTGTTCTGCTGTTAACAAGGCTGGTCTTGCGAAGCTCATTGGACTTGCAGGAGAGACCAATGTTCAGGGCGAAGAACAGAAGAAGCTGGATGTTCTTTCCAATGAGGTGTTTTGCAAGGCTTTGATAAGCAGTGGCAGAACATGCATCTTGGTTTCTGAAGAAGATGAGGATGCAATATTCGTGGAGCCTACGCAGCGTGGAAAGTTGTTCACTCTCTCTGTTCTTTACGATTTTGTCGCGGTTGCATTGTGGCCACCAGATGCCGGTGTAATCAAGGTTTTGATTGAATTGCAATTCTTCTATTTTTTATTACGATTCAGGTACTGTGTTGTTTTTGATCCATTAGACGGCTCCTCCAACATTGATTGTGGTGTTTCCATTGGAACTATTTTTGGGATTTATATGATGAAAGATAACCATGAACCAATCATAGAAGATGTTCTGCAACCAGGGAAGAACATGTTGGCAGCTGGTTATTGCATGTACGGAAGCTCTTGCACGTTTGTGATAACCACTGGAAGTGGTGTTAATGGTTTCACCCTTGACCCTTCTCTTGGCGAGTTTATCCTAACTCACCCTGACATTAAGATCCCAAAGAAAGGCAAGATTTATTCGGTGAACGAAGGGAACGCCAAGAACTGGGATGGTCCTACTGCTGCTTATGTGGAGAAATGCAAGTTTCCAACAGATGGTTCACCAGCAAAGTCTCTAAGATATATTGGAAGCATGGTAGCTGATGTTCATCGTACATTGCTATATGGAGGTACCTTTTTGTACCCTGCTGACAAAAAGAGTCCAAATGGAAAACTTCGTGTATTGTATGAAGTCTTCCCAATGTCCTTCTTGATGGAACAGGCAGGAGGACAGGCTTTCACCGGCAAGGAAAGGGCACTTGATTTAGTTCCAACAAAGTTGCATGAAAGATCTCCCATATTTCTTGGTAGCTATGATGATATCGAGGAAATCAAAGCTCTTTATGCTGCAGAGGCTAAATAA

Protein sequence

>MsG0680032055.01.T02

MDHSADAHRTDLMTITRFVLNEQSKHPESRGDFTILLNNIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFCKALISSGRTCILVSEEDEDAIFVEPTQRGKLFTLSVLYDFVAVALWPPDAGVIKVLIELQFFYFLLRFRYCVVFDPLDGSSNIDCGVSIGTIFGIYMMKDNHEPIIEDVLQPGKNMLAAGYCMYGSSCTFVITTGSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAAYVEKCKFPTDGSPAKSLRYIGSMVADVHRTLLYGGTFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKERALDLVPTKLHERSPIFLGSYDDIEEIKALYAAEAK*

>MsG0680032055.01.T01

MDHSADAHRTDLMTITRFVLNEQSKHPESRGDFTILLNNIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFCKALISSGRTCILVSEEDEDAIFVEPTQRGKLFTLSVLYDFVAVALWPPDAGVIKVLIELQFFYFLLRFRYCVVFDPLDGSSNIDCGVSIGTIFGIYMMKDNHEPIIEDVLQPGKNMLAAGYCMYGSSCTFVITTGSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAAYVEKCKFPTDGSPAKSLRYIGSMVADVHRTLLYGGTFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKERALDLVPTKLHERSPIFLGSYDDIEEIKALYAAEAK*