AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021346.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021346.01.T01 MTR_4g072300 97.531 81 2 0 1 81 11 91 1.43e-55 166
MsG0480021346.01.T01 MTR_4g072240 96.250 80 3 0 2 81 12 91 2.48e-54 163
MsG0480021346.01.T01 MTR_4g072220 87.654 81 10 0 1 81 11 91 5.25e-51 155
MsG0480021346.01.T01 MTR_4g072890 85.185 81 12 0 1 81 11 91 3.06e-49 150
MsG0480021346.01.T01 MTR_4g072870 86.076 79 11 0 3 81 13 91 1.37e-47 146
MsG0480021346.01.T01 MTR_4g072260 81.481 81 15 0 1 81 11 91 6.90e-47 144
MsG0480021346.01.T01 MTR_4g072330 77.922 77 17 0 5 81 12 88 6.72e-43 134
MsG0480021346.01.T01 MTR_3g084150 74.684 79 20 0 3 81 12 90 3.14e-41 130
MsG0480021346.01.T01 MTR_3g084180 74.684 79 20 0 3 81 12 90 3.14e-41 130
MsG0480021346.01.T01 MTR_4g072570 72.152 79 22 0 3 81 12 90 1.12e-40 129
MsG0480021346.01.T01 MTR_4g072310 69.620 79 24 0 3 81 13 91 2.81e-40 128
MsG0480021346.01.T01 MTR_4g072370 71.429 77 22 0 5 81 12 88 7.14e-40 127
MsG0480021346.01.T01 MTR_8g461410 72.152 79 22 0 3 81 12 90 7.57e-40 127
MsG0480021346.01.T01 MTR_4g072500 69.620 79 24 0 3 81 12 90 7.83e-40 127
MsG0480021346.01.T01 MTR_4g072740 70.370 81 24 0 1 81 5 85 8.21e-40 126
MsG0480021346.01.T01 MTR_4g072880 70.886 79 23 0 3 81 13 91 1.18e-39 126
MsG0480021346.01.T01 MTR_4g072730 69.620 79 24 0 3 81 12 90 2.56e-39 125
MsG0480021346.01.T01 MTR_4g072640 69.620 79 24 0 3 81 12 90 8.28e-39 124
MsG0480021346.01.T01 MTR_3g117630 69.620 79 24 0 3 81 12 90 1.67e-38 123
MsG0480021346.01.T01 MTR_4g072830 72.368 76 21 0 5 80 12 87 1.92e-38 123
MsG0480021346.01.T01 MTR_4g072250 70.886 79 22 1 3 81 13 90 2.89e-38 122
MsG0480021346.01.T01 MTR_4g072530 67.089 79 26 0 3 81 12 90 3.04e-38 122
MsG0480021346.01.T01 MTR_4g072480 68.354 79 25 0 3 81 12 90 3.12e-38 122
MsG0480021346.01.T01 MTR_4g072580 65.432 81 28 0 1 81 5 85 3.47e-38 122
MsG0480021346.01.T01 MTR_4g072680 68.354 79 25 0 3 81 12 90 4.06e-38 122
MsG0480021346.01.T01 MTR_3g110038 74.684 79 19 1 3 81 13 90 4.15e-38 122
MsG0480021346.01.T01 MTR_4g072460 68.354 79 25 0 3 81 12 90 5.06e-38 122
MsG0480021346.01.T01 MTR_3g084240 72.152 79 21 1 3 81 13 90 1.16e-37 121
MsG0480021346.01.T01 MTR_4g072630 68.293 82 25 1 1 81 5 86 1.19e-37 121
MsG0480021346.01.T01 MTR_4g072660 73.973 73 19 0 9 81 13 85 1.32e-37 120
MsG0480021346.01.T01 MTR_3g084170 72.152 79 21 1 3 81 13 90 1.71e-37 120
MsG0480021346.01.T01 MTR_4g072490 67.901 81 26 0 1 81 5 85 1.72e-37 120
MsG0480021346.01.T01 MTR_4g072620 65.823 79 27 0 3 81 12 90 2.18e-37 120
MsG0480021346.01.T01 MTR_3g110032 68.354 79 25 0 3 81 13 91 2.27e-37 120
MsG0480021346.01.T01 MTR_4g072230 68.354 79 23 1 3 81 13 89 3.91e-37 120
MsG0480021346.01.T01 MTR_4g072470 66.667 81 27 0 1 81 5 85 4.32e-37 119
MsG0480021346.01.T01 MTR_4g072600 65.432 81 28 0 1 81 5 85 8.55e-37 119
MsG0480021346.01.T01 MTR_4g072860 68.354 79 25 0 3 81 13 91 1.32e-36 118
MsG0480021346.01.T01 MTR_4g072610 71.233 73 21 0 9 81 12 84 1.93e-36 118
MsG0480021346.01.T01 MTR_4g072820 65.432 81 28 0 1 81 5 85 2.41e-36 117
MsG0480021346.01.T01 MTR_3g084250 67.089 79 26 0 3 81 12 90 2.65e-36 117
MsG0480021346.01.T01 MTR_3g110042 71.053 76 22 0 3 78 12 87 2.96e-36 117
MsG0480021346.01.T01 MTR_4g050700 68.354 79 25 0 3 81 13 91 3.88e-36 117
MsG0480021346.01.T01 MTR_2g012410 68.354 79 25 0 3 81 13 91 3.88e-36 117
MsG0480021346.01.T01 MTR_4g072270 67.089 79 26 0 3 81 13 91 4.99e-36 117
MsG0480021346.01.T01 MTR_4g072850 71.831 71 20 0 11 81 22 92 5.20e-36 117
MsG0480021346.01.T01 MTR_4g072540 72.857 70 19 0 12 81 17 86 6.32e-36 116
MsG0480021346.01.T01 MTR_5g008360 62.963 81 30 0 1 81 1 81 6.54e-36 116
MsG0480021346.01.T01 MTR_4g072670 72.857 70 19 0 12 81 17 86 8.79e-36 116
MsG0480021346.01.T01 MTR_4g072650 69.863 73 22 0 9 81 12 84 2.23e-35 115
MsG0480021346.01.T01 MTR_3g084260 67.089 79 26 0 3 81 13 91 4.83e-35 114
MsG0480021346.01.T01 MTR_3g084220 68.354 79 24 1 3 81 13 90 4.96e-35 114
MsG0480021346.01.T01 MTR_4g072510 71.429 70 20 0 12 81 17 86 1.12e-34 113
MsG0480021346.01.T01 MTR_4g072940 70.000 70 21 0 12 81 53 122 2.97e-34 114
MsG0480021346.01.T01 MTR_4g072720 70.000 70 21 0 12 81 17 86 3.66e-34 112
MsG0480021346.01.T01 MTR_4g072280 78.462 65 14 0 1 65 11 75 5.46e-34 111
MsG0480021346.01.T01 MTR_3g084190 72.857 70 19 0 12 81 21 90 1.22e-33 111
MsG0480021346.01.T01 MTR_4g072550 63.636 77 28 0 5 81 25 101 1.27e-33 111
MsG0480021346.01.T01 MTR_5g008370 62.353 85 27 1 2 81 6 90 1.40e-33 112
MsG0480021346.01.T01 MTR_4g072590 66.667 81 27 0 1 81 5 85 1.71e-33 110
MsG0480021346.01.T01 MTR_4g072465 60.976 82 31 1 1 81 5 86 9.30e-33 108
MsG0480021346.01.T01 MTR_8g461420 68.571 70 22 0 12 81 21 90 1.42e-32 108
MsG0480021346.01.T01 MTR_3g084160 71.429 70 20 0 12 81 21 90 1.66e-32 108
MsG0480021346.01.T01 MTR_3g084210 66.197 71 24 0 11 81 20 90 4.54e-32 107
MsG0480021346.01.T01 MTR_4g072690 71.212 66 19 0 16 81 20 85 5.71e-32 106
MsG0480021346.01.T01 MTR_3g084230 67.143 70 23 0 12 81 21 90 6.45e-32 107
MsG0480021346.01.T01 MTR_3g110045 67.143 70 23 0 12 81 80 149 6.65e-32 108
MsG0480021346.01.T01 MTR_5g008350 68.571 70 22 0 1 70 5 74 1.04e-31 105
MsG0480021346.01.T01 MTR_4g072450 69.697 66 20 0 16 81 20 85 7.43e-31 103
MsG0480021346.01.T01 MTR_4g072770 66.667 66 22 0 16 81 15 80 2.01e-30 102
MsG0480021346.01.T01 MTR_4g072380 63.415 82 29 1 1 81 5 86 2.29e-30 102
MsG0480021346.01.T01 MTR_4g072910 63.014 73 26 1 9 81 29 100 2.91e-30 102
MsG0480021346.01.T01 MTR_3g117640 64.179 67 23 1 16 81 34 100 1.69e-29 101
MsG0480021346.01.T01 MTR_4g072980 61.039 77 26 2 5 80 19 92 2.32e-29 100
MsG0480021346.01.T01 MTR_4g072560 59.091 66 26 1 16 80 32 97 1.03e-27 96.7
MsG0480021346.01.T01 MTR_3g084200 72.131 61 16 1 3 63 13 72 1.89e-27 95.9
MsG0480021346.01.T01 MTR_4g072750 72.414 58 16 0 5 62 16 73 2.53e-27 95.1
MsG0480021346.01.T01 MTR_4g072930 52.439 82 35 1 4 81 29 110 1.68e-26 94.0
MsG0480021346.01.T01 MTR_4g072290 53.165 79 23 1 3 81 13 77 2.49e-24 87.4
MsG0480021346.01.T01 MTR_3g110035 60.938 64 25 0 18 81 73 136 5.64e-24 88.2
MsG0480021346.01.T01 MTR_3g113310 50.000 68 33 1 14 81 40 106 5.77e-23 84.7
MsG0480021346.01.T01 MTR_3g117610 55.224 67 29 1 14 80 43 108 7.69e-23 84.3
MsG0480021346.01.T01 MTR_6g077850 47.761 67 35 0 15 81 33 99 1.76e-22 83.2
MsG0480021346.01.T01 MTR_4g072190 49.351 77 38 1 5 81 25 100 2.79e-22 82.8
MsG0480021346.01.T01 MTR_5g021820 50.746 67 32 1 15 81 39 104 2.37e-20 77.8
MsG0480021346.01.T01 MTR_8g076040 51.562 64 30 1 15 78 40 102 1.64e-19 75.9
MsG0480021346.01.T01 MTR_4g025830 50.704 71 31 2 13 80 76 145 4.30e-19 76.3
MsG0480021346.01.T01 MTR_4g005310 52.381 63 29 1 15 76 61 123 5.01e-19 75.9
MsG0480021346.01.T01 MTR_4g124750 53.030 66 30 1 15 80 68 132 5.19e-19 75.9
MsG0480021346.01.T01 MTR_2g043960 54.839 62 27 1 15 76 75 135 6.14e-19 75.9
MsG0480021346.01.T01 MTR_7g118010 50.000 68 31 2 16 81 23 89 8.63e-19 73.9
MsG0480021346.01.T01 MTR_3g092220 40.964 83 46 2 1 81 18 99 1.43e-18 73.6
MsG0480021346.01.T01 MTR_4g072160 49.315 73 36 1 8 80 29 100 1.43e-18 74.3
MsG0480021346.01.T01 MTR_0388s0020 47.945 73 34 2 9 78 68 139 7.45e-18 72.8
MsG0480021346.01.T01 MTR_8g026730 47.059 68 33 2 16 81 27 93 1.85e-17 70.9
MsG0480021346.01.T01 MTR_1g009150 45.714 70 37 1 7 76 62 130 1.46e-16 70.1
MsG0480021346.01.T01 MTR_1g061570 51.613 62 29 1 15 76 18 78 2.56e-16 68.2
MsG0480021346.01.T01 MTR_1g094750 46.774 62 32 1 15 76 49 109 8.22e-16 66.6
MsG0480021346.01.T01 MTR_1g024085 53.333 60 27 1 15 74 36 94 8.22e-16 67.4
MsG0480021346.01.T01 MTR_3g097120 44.156 77 34 2 12 80 5 80 4.88e-15 64.7
MsG0480021346.01.T01 MTR_4g005320 45.902 61 32 1 16 76 70 129 5.88e-15 65.9
MsG0480021346.01.T01 MTR_3g109160 44.595 74 40 1 3 76 56 128 6.72e-15 65.9
MsG0480021346.01.T01 MTR_8g461400 46.835 79 15 2 3 81 13 64 1.15e-14 62.4
MsG0480021346.01.T01 MTR_8g461210 46.774 62 32 1 15 76 34 94 2.23e-14 63.2
MsG0480021346.01.T01 MTR_2g066830 45.902 61 32 1 16 76 58 117 4.16e-14 63.2
MsG0480021346.01.T01 MTR_7g101740 45.312 64 34 1 15 78 39 101 4.70e-14 62.4
MsG0480021346.01.T01 MTR_4g072840 62.500 48 12 1 34 81 19 60 6.59e-14 60.5
MsG0480021346.01.T01 MTR_1g063950 44.068 59 32 1 15 73 47 104 1.24e-13 61.2
MsG0480021346.01.T01 MTR_3g098970 36.842 76 47 1 6 81 43 117 2.50e-13 61.2
MsG0480021346.01.T01 MTR_7g405740 45.455 66 35 1 16 81 67 131 3.95e-13 60.8
MsG0480021346.01.T01 MTR_1g059770 40.625 64 37 1 17 80 50 112 6.47e-13 59.7
MsG0480021346.01.T01 MTR_3g105900 69.444 36 11 0 15 50 1171 1206 7.12e-13 62.4
MsG0480021346.01.T01 MTR_2g095430 42.424 66 33 2 15 76 44 108 9.62e-13 59.3
MsG0480021346.01.T01 MTR_8g101520 41.538 65 37 1 17 81 51 114 1.36e-12 59.3
MsG0480021346.01.T01 MTR_8g094980 40.506 79 33 2 15 80 2 79 2.09e-12 57.8
MsG0480021346.01.T01 MTR_1g063310 39.744 78 44 3 6 81 16 92 3.14e-12 57.4
MsG0480021346.01.T01 MTR_1g063290 42.188 64 34 2 15 76 38 100 5.08e-12 57.0
MsG0480021346.01.T01 MTR_7g101890 39.683 63 35 2 16 76 52 113 6.32e-12 57.0
MsG0480021346.01.T01 MTR_1g063300 42.188 64 34 2 15 76 38 100 7.83e-12 56.2
MsG0480021346.01.T01 MTR_4g021810 40.845 71 39 3 7 76 18 86 8.71e-12 56.2
MsG0480021346.01.T01 MTR_1g063260 38.356 73 42 2 6 76 31 102 1.20e-11 55.8
MsG0480021346.01.T01 MTR_8g096470 43.333 60 33 1 17 76 47 105 4.02e-11 54.7
MsG0480021346.01.T01 MTR_8g096440 39.726 73 43 1 1 73 30 101 4.24e-11 55.5
MsG0480021346.01.T01 MTR_7g104950 35.484 62 39 1 19 80 53 113 5.49e-11 54.7
MsG0480021346.01.T01 MTR_7g104940 35.484 62 39 1 19 80 53 113 8.81e-11 54.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021346.01.T01 AT4G38840 72.059 68 18 1 15 81 32 99 5.58e-33 109
MsG0480021346.01.T01 AT5G18080 62.667 75 27 1 7 80 15 89 3.98e-32 107
MsG0480021346.01.T01 AT5G18020 64.103 78 23 2 3 79 15 88 1.94e-31 105
MsG0480021346.01.T01 AT5G18060 68.182 66 20 1 17 81 25 90 3.16e-31 105
MsG0480021346.01.T01 AT5G18050 63.158 76 24 2 6 80 17 89 9.68e-31 103
MsG0480021346.01.T01 AT2G21210 56.250 80 33 1 4 81 16 95 2.32e-30 103
MsG0480021346.01.T01 AT5G18010 57.895 76 31 1 7 81 15 90 2.60e-30 102
MsG0480021346.01.T01 AT5G18030 65.672 67 22 1 16 81 22 88 3.26e-30 102
MsG0480021346.01.T01 AT4G38825 60.000 75 29 1 8 81 15 89 3.66e-30 102
MsG0480021346.01.T01 AT2G21210 56.250 80 33 1 4 81 83 162 1.46e-29 103
MsG0480021346.01.T01 AT2G21200 59.722 72 28 1 10 80 15 86 9.53e-29 98.6
MsG0480021346.01.T01 AT4G34770 57.500 80 32 1 4 81 23 102 2.13e-28 98.6
MsG0480021346.01.T01 AT4G34800 55.263 76 31 1 4 76 9 84 2.83e-27 95.1
MsG0480021346.01.T01 AT3G03840 58.333 72 28 1 12 81 23 94 1.32e-26 93.6
MsG0480021346.01.T01 AT4G38850 60.294 68 24 1 17 81 22 89 1.36e-26 93.6
MsG0480021346.01.T01 AT3G03820 54.430 79 33 1 6 81 17 95 2.34e-26 93.2
MsG0480021346.01.T01 AT4G34810 56.716 67 25 1 16 78 48 114 4.13e-26 93.2
MsG0480021346.01.T01 AT3G03850 59.701 67 25 1 17 81 26 92 1.76e-25 90.9
MsG0480021346.01.T01 AT3G03830 57.143 70 27 1 15 81 23 92 6.97e-25 89.4
MsG0480021346.01.T01 AT4G13790 48.649 74 36 1 10 81 19 92 7.12e-25 89.0
MsG0480021346.01.T01 AT4G34790 60.000 65 24 1 16 78 39 103 1.47e-24 89.0
MsG0480021346.01.T01 AT4G34780 55.072 69 28 2 16 81 28 96 1.43e-22 83.6
MsG0480021346.01.T01 AT4G38860 50.000 68 34 0 14 81 38 105 1.11e-21 81.3
MsG0480021346.01.T01 AT1G75580 53.731 67 30 1 14 80 42 107 2.01e-21 80.9
MsG0480021346.01.T01 AT4G34760 51.471 68 32 1 14 81 41 107 2.41e-21 80.5
MsG0480021346.01.T01 AT1G19830 52.239 67 31 1 14 80 46 111 1.51e-20 79.0
MsG0480021346.01.T01 AT2G21220 50.000 66 32 1 15 80 39 103 1.70e-20 78.6
MsG0480021346.01.T01 AT3G43120 56.452 62 26 1 15 76 78 138 2.38e-20 79.7
MsG0480021346.01.T01 AT2G16580 52.308 65 30 1 14 78 42 105 3.47e-19 75.1
MsG0480021346.01.T01 AT5G20810 48.000 75 38 1 6 80 69 142 1.16e-18 75.5
MsG0480021346.01.T01 AT5G66260 54.545 66 29 1 16 81 34 98 1.85e-18 73.2
MsG0480021346.01.T01 AT5G20810 48.000 75 38 1 6 80 69 142 2.14e-18 75.1
MsG0480021346.01.T01 AT4G36110 50.000 64 31 1 15 78 39 101 4.88e-18 72.0
MsG0480021346.01.T01 AT2G18010 50.000 64 31 1 15 78 47 109 8.56e-18 71.6
MsG0480021346.01.T01 AT3G20220 50.769 65 30 2 16 79 47 110 2.76e-17 70.5
MsG0480021346.01.T01 AT2G45210 44.118 68 34 2 16 80 79 145 2.25e-16 69.3
MsG0480021346.01.T01 AT4G12410 47.059 68 32 2 16 80 76 142 4.84e-16 68.6
MsG0480021346.01.T01 AT2G46690 42.857 77 40 2 8 81 16 91 9.28e-16 66.6
MsG0480021346.01.T01 AT3G51200 46.753 77 39 2 1 76 24 99 9.78e-16 66.2
MsG0480021346.01.T01 AT1G75590 50.000 60 29 1 15 74 41 99 3.75e-15 66.2
MsG0480021346.01.T01 AT4G00880 50.000 72 30 3 15 81 27 97 4.94e-15 65.1
MsG0480021346.01.T01 AT4G34750 43.750 64 35 1 15 78 36 98 7.17e-15 65.1
MsG0480021346.01.T01 AT4G34750 43.750 64 35 1 15 78 36 98 7.17e-15 65.1
MsG0480021346.01.T01 AT3G60690 42.647 68 35 2 16 80 88 154 8.19e-15 65.5
MsG0480021346.01.T01 AT5G53590 40.278 72 37 2 15 81 45 115 1.10e-14 64.7
MsG0480021346.01.T01 AT2G37030 44.444 63 34 1 15 77 48 109 1.15e-14 63.9
MsG0480021346.01.T01 AT5G10990 48.333 60 30 1 15 74 40 98 1.54e-14 64.3
MsG0480021346.01.T01 AT3G61900 44.286 70 35 2 15 81 29 97 1.99e-14 63.9
MsG0480021346.01.T01 AT4G22620 44.118 68 34 2 16 80 79 145 2.09e-14 64.3
MsG0480021346.01.T01 AT3G12830 47.222 72 33 2 5 76 43 109 2.26e-14 63.5
MsG0480021346.01.T01 AT1G19840 50.000 60 29 1 15 74 40 98 3.77e-14 63.5
MsG0480021346.01.T01 AT3G53250 42.857 63 32 1 15 77 51 109 1.61e-13 61.2
MsG0480021346.01.T01 AT3G53250 42.857 63 32 1 15 77 82 140 2.04e-13 61.6
MsG0480021346.01.T01 AT1G56150 47.541 61 31 1 16 76 38 97 2.13e-13 60.5
MsG0480021346.01.T01 AT4G31320 41.026 78 39 2 3 80 73 143 2.24e-13 62.0
MsG0480021346.01.T01 AT2G24400 44.615 65 35 1 16 80 64 127 6.16e-13 60.8
MsG0480021346.01.T01 AT4G09530 39.394 66 37 2 15 77 27 92 8.29e-13 58.9
MsG0480021346.01.T01 AT1G16510 45.161 62 33 1 16 77 54 114 1.34e-12 59.3
MsG0480021346.01.T01 AT3G09870 42.188 64 34 2 15 76 44 106 3.94e-12 57.4
MsG0480021346.01.T01 AT2G36210 35.616 73 47 0 6 78 44 116 4.64e-11 55.1
MsG0480021346.01.T01 AT3G03847 56.000 50 20 2 24 73 80 127 4.83e-11 55.1

Find 22 sgRNAs with CRISPR-Local

Find 22 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATACGAGAAGTAAGGTTT+TGG 0.309226 4:-56908121 None:intergenic
AATCAATCTGAAGAAGAATA+TGG 0.345307 4:+56908047 MsG0480021346.01.T01:CDS
TTTAGTAATTCTTGAAATGA+AGG 0.399772 4:-56908026 None:intergenic
TAGACTGCAAGATAGCCTTT+TGG 0.442040 4:-56907951 None:intergenic
CTCAATTCATACGAGAAGTA+AGG 0.442942 4:-56908127 None:intergenic
GTAATTCTTGAAATGAAGGT+TGG 0.498263 4:-56908022 None:intergenic
TATGGATATGATCATCCAAC+GGG 0.521831 4:+56908065 MsG0480021346.01.T01:CDS
AGGTTGGTTCAAGTATGATA+CGG 0.535670 4:-56908006 None:intergenic
GGCTATCTTGCAGTCTACGT+TGG 0.536328 4:+56907957 MsG0480021346.01.T01:CDS
GGTTGGTTCAAGTATGATAC+GGG 0.557040 4:-56908005 None:intergenic
AAGGGATTCGAAGTCCCAAA+AGG 0.563694 4:+56907936 MsG0480021346.01.T01:CDS
CTCAACACAAGCATCTAGCA+AGG 0.576789 4:+56907917 MsG0480021346.01.T01:CDS
TGGAATTCATCCTCACTGCA+CGG 0.583395 4:-56908101 None:intergenic
CTTGCTAGATGCTTGTGTTG+AGG 0.618806 4:-56907916 None:intergenic
TCTACGTTGGAGATCAAATG+AGG 0.626265 4:+56907970 MsG0480021346.01.T01:CDS
ATATGGATATGATCATCCAA+CGG 0.628845 4:+56908064 MsG0480021346.01.T01:CDS
GCTTGTGTTGAGGAAAATGA+TGG 0.641773 4:-56907906 None:intergenic
TCAACACAAGCATCTAGCAA+GGG 0.660224 4:+56907918 MsG0480021346.01.T01:CDS
GGATATGATCATCCAACGGG+TGG 0.666271 4:+56908068 MsG0480021346.01.T01:CDS
GGAATTGTAAGACCACCCGT+TGG 0.684855 4:-56908080 None:intergenic
ACGTTGGAGATCAAATGAGG+CGG 0.704375 4:+56907973 MsG0480021346.01.T01:CDS
TCTTACAATTCCGTGCAGTG+AGG 0.737351 4:+56908091 MsG0480021346.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAGTAATTCTTGAAATGA+AGG - Chr4:56908029-56908048 None:intergenic 20.0%
! AATCAATCTGAAGAAGAATA+TGG + Chr4:56908047-56908066 MsG0480021346.01.T01:CDS 25.0%
ATATGGATATGATCATCCAA+CGG + Chr4:56908064-56908083 MsG0480021346.01.T01:CDS 30.0%
GTAATTCTTGAAATGAAGGT+TGG - Chr4:56908025-56908044 None:intergenic 30.0%
TATGGATATGATCATCCAAC+GGG + Chr4:56908065-56908084 MsG0480021346.01.T01:CDS 35.0%
! AGGTTGGTTCAAGTATGATA+CGG - Chr4:56908009-56908028 None:intergenic 35.0%
! TCATACGAGAAGTAAGGTTT+TGG - Chr4:56908124-56908143 None:intergenic 35.0%
GCTTGTGTTGAGGAAAATGA+TGG - Chr4:56907909-56907928 None:intergenic 40.0%
TCAACACAAGCATCTAGCAA+GGG + Chr4:56907918-56907937 MsG0480021346.01.T01:CDS 40.0%
TCTACGTTGGAGATCAAATG+AGG + Chr4:56907970-56907989 MsG0480021346.01.T01:CDS 40.0%
! AGACTGCAAGATAGCCTTTT+GGG - Chr4:56907953-56907972 None:intergenic 40.0%
! GGTTGGTTCAAGTATGATAC+GGG - Chr4:56908008-56908027 None:intergenic 40.0%
! TAGACTGCAAGATAGCCTTT+TGG - Chr4:56907954-56907973 None:intergenic 40.0%
AAGGGATTCGAAGTCCCAAA+AGG + Chr4:56907936-56907955 MsG0480021346.01.T01:CDS 45.0%
ACGTTGGAGATCAAATGAGG+CGG + Chr4:56907973-56907992 MsG0480021346.01.T01:CDS 45.0%
CTCAACACAAGCATCTAGCA+AGG + Chr4:56907917-56907936 MsG0480021346.01.T01:CDS 45.0%
CTTGCTAGATGCTTGTGTTG+AGG - Chr4:56907919-56907938 None:intergenic 45.0%
TCTTACAATTCCGTGCAGTG+AGG + Chr4:56908091-56908110 MsG0480021346.01.T01:CDS 45.0%
TGGAATTCATCCTCACTGCA+CGG - Chr4:56908104-56908123 None:intergenic 45.0%
GGAATTGTAAGACCACCCGT+TGG - Chr4:56908083-56908102 None:intergenic 50.0%
GGATATGATCATCCAACGGG+TGG + Chr4:56908068-56908087 MsG0480021346.01.T01:CDS 50.0%
GGCTATCTTGCAGTCTACGT+TGG + Chr4:56907957-56907976 MsG0480021346.01.T01:CDS 50.0%
Chromosome Type Strat End Strand Name
Chr4 gene 56907903 56908148 56907903 ID=MsG0480021346.01;Name=MsG0480021346.01
Chr4 mRNA 56907903 56908148 56907903 ID=MsG0480021346.01.T01;Parent=MsG0480021346.01;Name=MsG0480021346.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|81
Chr4 exon 56907903 56908148 56907903 ID=MsG0480021346.01.T01:exon:7122;Parent=MsG0480021346.01.T01
Chr4 CDS 56907903 56908148 56907903 ID=MsG0480021346.01.T01:cds;Parent=MsG0480021346.01.T01
Gene Sequence

>MsG0480021346.01.T01

ATGCCATCATTTTCCTCAACACAAGCATCTAGCAAGGGATTCGAAGTCCCAAAAGGCTATCTTGCAGTCTACGTTGGAGATCAAATGAGGCGGTTTGTGATTCCCGTATCATACTTGAACCAACCTTCATTTCAAGAATTACTAAATCAATCTGAAGAAGAATATGGATATGATCATCCAACGGGTGGTCTTACAATTCCGTGCAGTGAGGATGAATTCCAAAACCTTACTTCTCGTATGAATTGA

Protein sequence

>MsG0480021346.01.T01

MPSFSSTQASSKGFEVPKGYLAVYVGDQMRRFVIPVSYLNQPSFQELLNQSEEEYGYDHPTGGLTIPCSEDEFQNLTSRMN*